ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart09b05 |
|---|---|
| Clone Library Name | barley_pub |
>BI1_ORYSA (Q9MBD8) Bax inhibitor 1 (BI-1) (OsBI-1)| Length = 249 Score = 137 bits (345), Expect = 7e-33 Identities = 69/82 (84%), Positives = 75/82 (91%), Gaps = 3/82 (3%) Frame = +2 Query: 116 MDAFYSTSSA---AASGWGHDSLXNFRQISPAVQSHLRLVYLTLCFALASSAVGAYLXIA 286 MDAFYSTSSA AASGWG+DSL NFRQISPAVQSHL+LVYLTLC ALA+SAVGAYL +A Sbjct: 1 MDAFYSTSSAYGAAASGWGYDSLKNFRQISPAVQSHLKLVYLTLCVALAASAVGAYLHVA 60 Query: 287 LNIGGMLTMLACVGTIAWMFSV 352 LNIGGMLTML CVG+IAW+FSV Sbjct: 61 LNIGGMLTMLGCVGSIAWLFSV 82
>BI1_ARATH (Q9LD45) Bax inhibitor 1 (BI-1) (AtBI-1)| Length = 247 Score = 97.4 bits (241), Expect = 7e-21 Identities = 47/80 (58%), Positives = 58/80 (72%), Gaps = 2/80 (2%) Frame = +2 Query: 116 MDAFYS--TSSAAASGWGHDSLXNFRQISPAVQSHLRLVYLTLCFALASSAVGAYLXIAL 289 MDAF S S + W +DSL NFRQISPAVQ+HL+ VYLTLC AL +SA GAYL + Sbjct: 1 MDAFSSFFDSQPGSRSWSYDSLKNFRQISPAVQNHLKRVYLTLCCALVASAFGAYLHVLW 60 Query: 290 NIGGMLTMLACVGTIAWMFS 349 NIGG+LT + C+GT+ W+ S Sbjct: 61 NIGGILTTIGCIGTMIWLLS 80
>BI1_PAROL (Q9IA79) Probable Bax inhibitor 1 (BI-1)| Length = 237 Score = 46.6 bits (109), Expect = 2e-05 Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 2/61 (3%) Frame = +2 Query: 167 DSLXNFRQISPAVQSHLRLVYLTLCFALASSAVGAYLXIALNI--GGMLTMLACVGTIAW 340 DSL F QIS + Q HL+ VY +L + +A G+Y+ + + GGML++L +G + W Sbjct: 11 DSLFKFSQISHSTQVHLKNVYSSLAVCMFVAAAGSYVHVVTRLFQGGMLSVLGSLGMMFW 70 Query: 341 M 343 + Sbjct: 71 L 71
>BI1_PIG (Q66RM2) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 43.1 bits (100), Expect = 2e-04 Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Frame = +2 Query: 167 DSLXNFRQISPAVQSHLRLVYLTLCFALASSAVGAYLXIALNI--GGMLTMLACVGTIAW 340 D+L F I+P+ Q HL+ VY + + +A GAY+ + G+L+ L +G + W Sbjct: 11 DALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTRFIQAGLLSALGSLGLMIW 70 Query: 341 MFS 349 + + Sbjct: 71 LMA 73
>BI1_MOUSE (Q9D2C7) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 41.2 bits (95), Expect = 6e-04 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Frame = +2 Query: 167 DSLXNFRQISPAVQSHLRLVYLTLCFALASSAVGAYLXIALNI--GGMLTMLACVGTIAW 340 D+L F I+P+ Q HL+ VY + + +A GAY+ + + G+L+ L + + W Sbjct: 11 DALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTHFIQAGLLSALGSLALMIW 70 Query: 341 MFS 349 + + Sbjct: 71 LMA 73
>BI1_PONPY (Q5R7R1) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Frame = +2 Query: 167 DSLXNFRQISPAVQSHLRLVYLTLCFALASSAVGAYLXIALNI--GGMLTMLACVGTIAW 340 D+L F I+P+ Q HL+ VY + + +A GAY+ + + G+L+ L + + W Sbjct: 11 DALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTHFIQAGLLSALGSLILMIW 70 Query: 341 MFS 349 + + Sbjct: 71 LMA 73
>BI1_HUMAN (P55061) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| (Transmembrane BAX inhibitor motif-containing protein 6) Length = 237 Score = 38.9 bits (89), Expect = 0.003 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Frame = +2 Query: 167 DSLXNFRQISPAVQSHLRLVYLTLCFALASSAVGAYLXIALNI--GGMLTMLACVGTIAW 340 D+L F I+P+ Q HL+ VY + + +A GAY+ + + G+L+ L + + W Sbjct: 11 DALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHMVTHFIQAGLLSALGSLILMIW 70 Query: 341 MFS 349 + + Sbjct: 71 LMA 73
>BI1_RAT (P55062) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 36.2 bits (82), Expect = 0.020 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = +2 Query: 167 DSLXNFRQISPAVQSHLRLVYLTLCFALASSAVGAYLXIALNI--GGMLTMLACV 325 D+L F I+P+ Q HL+ VY + + +A GAY+ + G+L+ L + Sbjct: 11 DALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTRFIQAGLLSALGAL 65
>UBP3_SCHPO (O94269) Probable ubiquitin carboxyl-terminal hydrolase 3 (EC| 3.1.2.15) (Ubiquitin thioesterase 3) (Ubiquitin-specific processing protease 3) (Deubiquitinating enzyme 3) Length = 512 Score = 29.6 bits (65), Expect = 1.9 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +2 Query: 62 EARPPRSDSIRRAGAGAGMDAFYSTSSAAASGW 160 + R P+SD G +G+D+F SS ASGW Sbjct: 256 DERNPKSDIKISNGIKSGLDSFDDQSSVEASGW 288
>WRN_MOUSE (O09053) Werner syndrome ATP-dependent helicase homolog (EC| 3.6.1.-) Length = 1401 Score = 29.6 bits (65), Expect = 1.9 Identities = 18/71 (25%), Positives = 35/71 (49%) Frame = +2 Query: 83 DSIRRAGAGAGMDAFYSTSSAAASGWGHDSLXNFRQISPAVQSHLRLVYLTLCFALASSA 262 D +++ + G+ + S WGHD +FR + ++++ L LV + A ASS+ Sbjct: 615 DLLQKLDSSIGITLIAVDEAHCISEWGHDFRSSFRMLG-SLKTALPLVPVIALSATASSS 673 Query: 263 VGAYLXIALNI 295 + + LN+ Sbjct: 674 IREDIISCLNL 684
>Y402_PASMU (Q9CNM5) Hypothetical protein PM0402| Length = 220 Score = 28.5 bits (62), Expect = 4.3 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = +2 Query: 215 LRLVYLTLCFALASSAVGAYLXIALNI--GGMLTMLA 319 LR Y L LA SAV AY+ ++LN+ G++ MLA Sbjct: 21 LRNTYFLLGLTLAFSAVVAYISMSLNLPRPGLILMLA 57
>WRN_HUMAN (Q14191) Werner syndrome ATP-dependent helicase (EC 3.6.1.-)| Length = 1432 Score = 28.1 bits (61), Expect = 5.6 Identities = 19/80 (23%), Positives = 38/80 (47%) Frame = +2 Query: 89 IRRAGAGAGMDAFYSTSSAAASGWGHDSLXNFRQISPAVQSHLRLVYLTLCFALASSAVG 268 +++ A G+ + S WGHD +FR++ ++++ L +V + A ASS++ Sbjct: 653 LQQLEADIGITLIAVDEAHCISEWGHDFRDSFRKLG-SLKTALPMVPIVALTATASSSIR 711 Query: 269 AYLXIALNIGGMLTMLACVG 328 + LN+ + C G Sbjct: 712 EDIVRCLNLRN--PQITCTG 729
>K2C1_MOUSE (P04104) Keratin, type II cytoskeletal 1 (Cytokeratin-1) (CK-1)| (Keratin-1) (K1) (67 kDa cytokeratin) Length = 627 Score = 27.7 bits (60), Expect = 7.3 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%) Frame = +2 Query: 26 NASAGQARNLACEARPPRSDSIRRAGAGAGMDAFYSTSSAAASGWGHDSLXNF---RQIS 196 N S+G A ++ + R S R G G G + ++ SG+G SL N R IS Sbjct: 18 NFSSGSAGLVSFQRRSTSSSMRRSGGGGGGRFSGGGFCGSSGSGFGSKSLMNLGGGRSIS 77 Query: 197 PAV 205 +V Sbjct: 78 KSV 80
>CY41_TRYBB (Q99279) Receptor-type adenylate cyclase GRESAG 4.1 (EC 4.6.1.1)| (ATP pyrophosphate-lyase) (Adenylyl cyclase) Length = 1242 Score = 27.3 bits (59), Expect = 9.5 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +1 Query: 253 LICRGCLPTHCPEHRRDANXA 315 + C C+PTH P RR+ N A Sbjct: 872 IYCPWCVPTHLPAERRNNNRA 892
>NEUR1_HUMAN (Q99519) Sialidase-1 precursor (EC 3.2.1.18) (Lysosomal sialidase)| (N-acetyl-alpha-neuraminidase 1) (Acetylneuraminyl hydrolase) (G9 sialidase) Length = 415 Score = 27.3 bits (59), Expect = 9.5 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = -1 Query: 222 SLRWDCTAGEIWRKFXRESWPQP 154 +LRW + G WRK + WP P Sbjct: 345 TLRWSFSNGTSWRKETVQLWPGP 367 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,887,617 Number of Sequences: 219361 Number of extensions: 650007 Number of successful extensions: 2299 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1949 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2297 length of database: 80,573,946 effective HSP length: 93 effective length of database: 60,173,373 effective search space used: 1444160952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
