ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart09b01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009403.1| Triticum aestivum clone wlm96.pk047.l4:fis, full ... 262 1e-66
2ref|XM_470089.1| Oryza sativa (japonica cultivar-group), mRNA 163 7e-37
3dbj|AK121351.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 7e-37
4dbj|AK099527.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 7e-37
5gb|AF174486.1|AF174486 Zea mays methylenetetrahydrofolate reduct... 129 1e-26
6gb|AY109096.1| Zea mays PCO119715 mRNA sequence 129 1e-26
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 121 2e-24
8gb|AC135594.4| Oryza sativa chromosome 3 BAC OSJNBa0024F18 genom... 121 2e-24
9gb|AC139172.2| Oryza sativa chromosome 3 BAC OSJNBb0042K11 genom... 121 2e-24
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
11gb|AC096691.6| Oryza sativa chromosome 10 BAC OSJNBa0083M08 geno... 115 2e-22
12dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
13gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 115 2e-22
14gb|AY105951.1| Zea mays PCO080381 mRNA sequence 113 6e-22
15ref|NM_196093.1| Oryza sativa (japonica cultivar-group) putative... 111 2e-21
16dbj|AK120131.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
17dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
18dbj|AP003880.3| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
19gb|BT017687.1| Zea mays clone EL01N0444B12.c mRNA sequence 105 1e-19
20ref|XM_482218.1| Oryza sativa (japonica cultivar-group), mRNA 98 4e-17
21dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
22dbj|AK073324.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
23gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 96 1e-16
24emb|AL928781.4|CNS08CCB Oryza sativa chromosome 12, . BAC OSJNBa... 96 1e-16
25emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa... 96 1e-16
26dbj|AK062082.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
27gb|AC020912.6| Homo sapiens chromosome 19 clone CTD-2583G20, com... 44 0.46
28gb|AC142145.3| Mus musculus BAC clone RP24-69D13 from chromosome... 42 1.8
29ref|NM_011941.2| Mus musculus mitogen activated protein kinase b... 42 1.8
30gb|BC011271.1| Mus musculus mitogen activated protein kinase bin... 42 1.8
31gb|BC070449.1| Mus musculus mitogen activated protein kinase bin... 42 1.8
32dbj|AK122323.1| Mus musculus mRNA for mKIAA0596 protein 42 1.8
33emb|AL157792.3|CNS01RG7 Human chromosome 14 DNA sequence BAC R-3... 42 1.8
34gb|AC133655.4| Mus musculus BAC clone RP24-364H7 from 8, complet... 42 1.8
35dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone... 42 1.8
36emb|AL833774.4| Mouse DNA sequence from clone RP23-383I16 on chr... 42 1.8
37dbj|AB029482.1| Mus musculus mRNA for JNK-binding protein JNKBP1... 42 1.8
38ref|NM_100608.2| Arabidopsis thaliana ATSTP2; carbohydrate trans... 40 7.1
39ref|NM_127537.2| Arabidopsis thaliana unknown protein AT2G19790 ... 40 7.1
40ref|XM_654665.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 7.1
41gb|AC084784.3| Homo sapiens chromosome 3 clone CTD-2576J21 map q... 40 7.1
42gb|AY059143.1| Arabidopsis thaliana putative clathrin assembly p... 40 7.1
43gb|AF370185.1| Arabidopsis thaliana putative clathrin assembly p... 40 7.1
44gb|AC022884.12| Homo sapiens chromosome 18, clone RP11-449D8, co... 40 7.1
45emb|AL449217.1|HS197B24 Homo sapiens chromosome 3 sequence from ... 40 7.1
46emb|CR385074.10| Zebrafish DNA sequence from clone CH211-258K6 i... 40 7.1
47emb|BX470070.27| Zebrafish DNA sequence from clone CH211-194B21 ... 40 7.1
48gb|DQ424897.1| Striga asiatica histidine kinase SHK278 mRNA, com... 40 7.1
49gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F22 map... 40 7.1
50gb|AC018697.4| Homo sapiens BAC clone RP11-577J12 from 18, compl... 40 7.1
51dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
52emb|BX813610.1|CNS0AALW Arabidopsis thaliana Full-length cDNA Co... 40 7.1
53gb|AC022464.4|AC022464 Genomic sequence for Arabidopsis thaliana... 40 7.1
54gb|AF188029.5| Homo sapiens chromosome 8 clone GS1-56L10 map p22... 40 7.1
55gb|AC112642.8| Homo sapiens 3 BAC RP11-515I14 (Roswell Park Canc... 40 7.1
56gb|AY088273.1| Arabidopsis thaliana clone 5064 mRNA, complete se... 40 7.1
57gb|AC135352.6| Homo sapiens chromosome 8, clone RP11-369K16, com... 40 7.1
58gb|AC167140.1| Mus musculus BAC clone RP24-482O17 from chromosom... 40 7.1
59dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
60dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
61dbj|BS000021.1| Pan troglodytes chromosome 22 clone:PTB-141K15, ... 40 7.1
62gb|AE000657.1| Aquifex aeolicus VF5, complete genome 40 7.1
63emb|BX001060.3|CNS08CE8 Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.1
64emb|CT025563.11| Mouse DNA sequence from clone RP23-472D20 on ch... 40 7.1
65emb|AL672070.12| Mouse DNA sequence from clone RP23-115A1 on chr... 40 7.1 
>gb|BT009403.1| Triticum aestivum clone wlm96.pk047.l4:fis, full insert mRNA
           sequence
          Length = 1653

 Score =  262 bits (132), Expect = 1e-66
 Identities = 183/202 (90%), Gaps = 7/202 (3%)
 Strand = Plus / Plus

                                                                       
Query: 247 gaatcttggattaatagaggaatccnagatttcaagaacattaccttggagggcaccaac 306
           ||||||||| ||||||||||| ||| || ||||||||||||||||||||||| |||||||
Sbjct: 516 gaatcttggcttaatagaggagtccaagctttcaagaacattaccttggaggccaccaac 575

                                                                       
Query: 307 taatgttttccgtgtcaaagaggatgttcgtcctatattctgtgagcagggccaacagac 366
           |||||||||||||||||||||||||||||| ||||||||||       ||||||||||||
Sbjct: 576 taatgttttccgtgtcaaagaggatgttcgccctatattct-------gggccaacagac 628

                                                                       
Query: 367 canagagttacatttgaaggaccactggttgggatcaatacccacaggggcggtggggtg 426
           || |||||||||||| |||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 629 caaagagttacatttcaaggaccactggttgggatcaatacccacatggacggtggggtg 688

                                 
Query: 427 attccnggaacccatcanacgg 448
           ||||| ||||||||||| ||||
Sbjct: 689 attccaggaacccatcatacgg 710
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>ref|XM_470089.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2167

 Score =  163 bits (82), Expect = 7e-37
 Identities = 178/212 (83%), Gaps = 7/212 (3%)
 Strand = Plus / Plus

                                                                        
Query: 251  cttggattaatagaggaatccnagatttcaagaacattaccttggagggcaccaactaat 310
            ||||||||||| ||||| ||| |||| |||||  |||| ||||||||| | ||||| |||
Sbjct: 964  cttggattaattgaggagtccaagatctcaaggtcattgccttggaggcccccaacaaat 1023

                                                                        
Query: 311  gttttccgtgtcaaagaggatgttcgtcctatattctgtgagcagggccaacagaccana 370
            |||||||||||||| |||||||| || |||||||||||       ||| ||||||||| |
Sbjct: 1024 gttttccgtgtcaaggaggatgtccgccctatattctg-------ggctaacagaccaaa 1076

                                                                        
Query: 371  gagttacatttgaaggaccactggttgggatcaatacccacaggggcggtggggtgattc 430
            ||| || |||| |||||||  ||||||||||||||||||||| |||||||||||||||||
Sbjct: 1077 gagctatatttcaaggacccttggttgggatcaatacccacatgggcggtggggtgattc 1136

                                            
Query: 431  cnggaacccatcanacggagcccttagtgact 462
            | ||||||||||  | ||||| |||| |||||
Sbjct: 1137 ccggaacccatcgtatggagcacttactgact 1168
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>dbj|AK121351.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121O06, full
            insert sequence
          Length = 2169

 Score =  163 bits (82), Expect = 7e-37
 Identities = 178/212 (83%), Gaps = 7/212 (3%)
 Strand = Plus / Plus

                                                                        
Query: 251  cttggattaatagaggaatccnagatttcaagaacattaccttggagggcaccaactaat 310
            ||||||||||| ||||| ||| |||| |||||  |||| ||||||||| | ||||| |||
Sbjct: 965  cttggattaattgaggagtccaagatctcaaggtcattgccttggaggcccccaacaaat 1024

                                                                        
Query: 311  gttttccgtgtcaaagaggatgttcgtcctatattctgtgagcagggccaacagaccana 370
            |||||||||||||| |||||||| || |||||||||||       ||| ||||||||| |
Sbjct: 1025 gttttccgtgtcaaggaggatgtccgccctatattctg-------ggctaacagaccaaa 1077

                                                                        
Query: 371  gagttacatttgaaggaccactggttgggatcaatacccacaggggcggtggggtgattc 430
            ||| || |||| |||||||  ||||||||||||||||||||| |||||||||||||||||
Sbjct: 1078 gagctatatttcaaggacccttggttgggatcaatacccacatgggcggtggggtgattc 1137

                                            
Query: 431  cnggaacccatcanacggagcccttagtgact 462
            | ||||||||||  | ||||| |||| |||||
Sbjct: 1138 ccggaacccatcgtatggagcacttactgact 1169
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>dbj|AK099527.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013031C07, full
           insert sequence
          Length = 1119

 Score =  163 bits (82), Expect = 7e-37
 Identities = 178/212 (83%), Gaps = 7/212 (3%)
 Strand = Plus / Plus

                                                                       
Query: 251 cttggattaatagaggaatccnagatttcaagaacattaccttggagggcaccaactaat 310
           ||||||||||| ||||| ||| |||| |||||  |||| ||||||||| | ||||| |||
Sbjct: 26  cttggattaattgaggagtccaagatctcaaggtcattgccttggaggcccccaacaaat 85

                                                                       
Query: 311 gttttccgtgtcaaagaggatgttcgtcctatattctgtgagcagggccaacagaccana 370
           |||||||||||||| |||||||| || |||||||||||       ||| ||||||||| |
Sbjct: 86  gttttccgtgtcaaggaggatgtccgccctatattctg-------ggctaacagaccaaa 138

                                                                       
Query: 371 gagttacatttgaaggaccactggttgggatcaatacccacaggggcggtggggtgattc 430
           ||| || |||| |||||||  ||||||||||||||||||||| |||||||||||||||||
Sbjct: 139 gagctatatttcaaggacccttggttgggatcaatacccacatgggcggtggggtgattc 198

                                           
Query: 431 cnggaacccatcanacggagcccttagtgact 462
           | ||||||||||  | ||||| |||| |||||
Sbjct: 199 ccggaacccatcgtatggagcacttactgact 230
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>gb|AF174486.1|AF174486 Zea mays methylenetetrahydrofolate reductase mRNA, complete cds
          Length = 2225

 Score =  129 bits (65), Expect = 1e-26
 Identities = 176/215 (81%), Gaps = 7/215 (3%)
 Strand = Plus / Plus

                                                                        
Query: 247  gaatcttggattaatagaggaatccnagatttcaagaacattaccttggagggcaccaac 306
            ||||||||||||||| ||||| ||| || |||||||  |||||||||||||| || | ||
Sbjct: 970  gaatcttggattaattgaggagtccaaggtttcaaggccattaccttggaggccagcgac 1029

                                                                        
Query: 307  taatgttttccgtgtcaaagaggatgttcgtcctatattctgtgagcagggccaacagac 366
            ||||||||||||||| |||||||||||||| ||||||||||       ||||||||||||
Sbjct: 1030 taatgttttccgtgttaaagaggatgttcgacctatattct-------gggccaacagac 1082

                                                                        
Query: 367  canagagttacatttgaaggaccactggttgggatcaatacccacaggggcggtggggtg 426
            || |||| ||  ||  ||||||    ||||||||||| || || || || ||||||||||
Sbjct: 1083 caaagagctatcttaaaaggacattaggttgggatcagtatccccatggacggtggggtg 1142

                                               
Query: 427  attccnggaacccatcanacggagcccttagtgac 461
            ||||  ||||||||||| | ||||| |||| ||||
Sbjct: 1143 attctcggaacccatcatatggagcacttactgac 1177
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>gb|AY109096.1| Zea mays PCO119715 mRNA sequence
          Length = 2423

 Score =  129 bits (65), Expect = 1e-26
 Identities = 176/215 (81%), Gaps = 7/215 (3%)
 Strand = Plus / Plus

                                                                        
Query: 247  gaatcttggattaatagaggaatccnagatttcaagaacattaccttggagggcaccaac 306
            ||||||||||||||| ||||| ||| || |||||||  |||||||||||||| || | ||
Sbjct: 953  gaatcttggattaattgaggagtccaaggtttcaaggccattaccttggaggccagcgac 1012

                                                                        
Query: 307  taatgttttccgtgtcaaagaggatgttcgtcctatattctgtgagcagggccaacagac 366
            ||||||||||||||| |||||||||||||| ||||||||||       ||||||||||||
Sbjct: 1013 taatgttttccgtgttaaagaggatgttcgacctatattct-------gggccaacagac 1065

                                                                        
Query: 367  canagagttacatttgaaggaccactggttgggatcaatacccacaggggcggtggggtg 426
            || |||| ||  ||  ||||||    ||||||||||| || || || || ||||||||||
Sbjct: 1066 caaagagctatcttaaaaggacattaggttgggatcagtatccccatggacggtggggtg 1125

                                               
Query: 427  attccnggaacccatcanacggagcccttagtgac 461
            ||||  ||||||||||| | ||||| |||| ||||
Sbjct: 1126 attctcggaacccatcatatggagcacttactgac 1160
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  121 bits (61), Expect = 2e-24
 Identities = 100/114 (87%)
 Strand = Plus / Minus

                                                                            
Query: 349      tgagcagggccaacagaccanagagttacatttgaaggaccactggttgggatcaatacc 408
                |||||||||| ||||||||| |||| || |||| |||||||  |||||||||||||||||
Sbjct: 33866275 tgagcagggctaacagaccaaagagctatatttcaaggacccttggttgggatcaatacc 33866216

                                                                      
Query: 409      cacaggggcggtggggtgattccnggaacccatcanacggagcccttagtgact 462
                |||| |||||||||||||||||| ||||||||||  | ||||| |||| |||||
Sbjct: 33866215 cacatgggcggtggggtgattcccggaacccatcgtatggagcacttactgact 33866162



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 90/104 (86%)
 Strand = Plus / Minus

                                                                            
Query: 245      cagaatcttggattaatagaggaatccnagatttcaagaacattaccttggagggcacca 304
                ||||| ||||||||||| ||||| ||| |||| |||||  |||| ||||||||| | |||
Sbjct: 33866462 cagaaccttggattaattgaggagtccaagatctcaaggtcattgccttggaggccccca 33866403

                                                            
Query: 305      actaatgttttccgtgtcaaagaggatgttcgtcctatattctg 348
                || ||||||||||||||||| |||||||| || |||||||||||
Sbjct: 33866402 acaaatgttttccgtgtcaaggaggatgtccgccctatattctg 33866359
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>gb|AC135594.4| Oryza sativa chromosome 3 BAC OSJNBa0024F18 genomic sequence,
            complete sequence
          Length = 159795

 Score =  121 bits (61), Expect = 2e-24
 Identities = 100/114 (87%)
 Strand = Plus / Plus

                                                                        
Query: 349  tgagcagggccaacagaccanagagttacatttgaaggaccactggttgggatcaatacc 408
            |||||||||| ||||||||| |||| || |||| |||||||  |||||||||||||||||
Sbjct: 6965 tgagcagggctaacagaccaaagagctatatttcaaggacccttggttgggatcaatacc 7024

                                                                  
Query: 409  cacaggggcggtggggtgattccnggaacccatcanacggagcccttagtgact 462
            |||| |||||||||||||||||| ||||||||||  | ||||| |||| |||||
Sbjct: 7025 cacatgggcggtggggtgattcccggaacccatcgtatggagcacttactgact 7078



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 90/104 (86%)
 Strand = Plus / Plus

                                                                        
Query: 245  cagaatcttggattaatagaggaatccnagatttcaagaacattaccttggagggcacca 304
            ||||| ||||||||||| ||||| ||| |||| |||||  |||| ||||||||| | |||
Sbjct: 6778 cagaaccttggattaattgaggagtccaagatctcaaggtcattgccttggaggccccca 6837

                                                        
Query: 305  actaatgttttccgtgtcaaagaggatgttcgtcctatattctg 348
            || ||||||||||||||||| |||||||| || |||||||||||
Sbjct: 6838 acaaatgttttccgtgtcaaggaggatgtccgccctatattctg 6881
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>gb|AC139172.2| Oryza sativa chromosome 3 BAC OSJNBb0042K11 genomic sequence,
           complete sequence
          Length = 27024

 Score =  121 bits (61), Expect = 2e-24
 Identities = 100/114 (87%)
 Strand = Plus / Minus

                                                                       
Query: 349 tgagcagggccaacagaccanagagttacatttgaaggaccactggttgggatcaatacc 408
           |||||||||| ||||||||| |||| || |||| |||||||  |||||||||||||||||
Sbjct: 477 tgagcagggctaacagaccaaagagctatatttcaaggacccttggttgggatcaatacc 418

                                                                 
Query: 409 cacaggggcggtggggtgattccnggaacccatcanacggagcccttagtgact 462
           |||| |||||||||||||||||| ||||||||||  | ||||| |||| |||||
Sbjct: 417 cacatgggcggtggggtgattcccggaacccatcgtatggagcacttactgact 364



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 90/104 (86%)
 Strand = Plus / Minus

                                                                       
Query: 245 cagaatcttggattaatagaggaatccnagatttcaagaacattaccttggagggcacca 304
           ||||| ||||||||||| ||||| ||| |||| |||||  |||| ||||||||| | |||
Sbjct: 664 cagaaccttggattaattgaggagtccaagatctcaaggtcattgccttggaggccccca 605

                                                       
Query: 305 actaatgttttccgtgtcaaagaggatgttcgtcctatattctg 348
           || ||||||||||||||||| |||||||| || |||||||||||
Sbjct: 604 acaaatgttttccgtgtcaaggaggatgtccgccctatattctg 561
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  121 bits (61), Expect = 2e-24
 Identities = 100/114 (87%)
 Strand = Plus / Minus

                                                                            
Query: 349      tgagcagggccaacagaccanagagttacatttgaaggaccactggttgggatcaatacc 408
                |||||||||| ||||||||| |||| || |||| |||||||  |||||||||||||||||
Sbjct: 33956747 tgagcagggctaacagaccaaagagctatatttcaaggacccttggttgggatcaatacc 33956688

                                                                      
Query: 409      cacaggggcggtggggtgattccnggaacccatcanacggagcccttagtgact 462
                |||| |||||||||||||||||| ||||||||||  | ||||| |||| |||||
Sbjct: 33956687 cacatgggcggtggggtgattcccggaacccatcgtatggagcacttactgact 33956634



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 90/104 (86%)
 Strand = Plus / Minus

                                                                            
Query: 245      cagaatcttggattaatagaggaatccnagatttcaagaacattaccttggagggcacca 304
                ||||| ||||||||||| ||||| ||| |||| |||||  |||| ||||||||| | |||
Sbjct: 33956934 cagaaccttggattaattgaggagtccaagatctcaaggtcattgccttggaggccccca 33956875

                                                            
Query: 305      actaatgttttccgtgtcaaagaggatgttcgtcctatattctg 348
                || ||||||||||||||||| |||||||| || |||||||||||
Sbjct: 33956874 acaaatgttttccgtgtcaaggaggatgtccgccctatattctg 33956831
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>gb|AC096691.6| Oryza sativa chromosome 10 BAC OSJNBa0083M08 genomic sequence, complete
             sequence
          Length = 106110

 Score =  115 bits (58), Expect = 2e-22
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                         
Query: 36    tgcagtgctctttcgtggagcaccggaactacnaggtcgtctacaggcgctacgcctccc 95
             ||||||| ||||||||||||||||| |||||| |||| || ||| |||||||||||||||
Sbjct: 38220 tgcagtgttctttcgtggagcaccgcaactacaaggtggtgtaccggcgctacgcctccc 38279

                                             
Query: 96    tcttcttcctcgtcggcgtggacnacgatgag 127
             |||||||||| |||||||| ||| ||||||||
Sbjct: 38280 tcttcttcctagtcggcgtcgacaacgatgag 38311
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  115 bits (58), Expect = 2e-22
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                            
Query: 36       tgcagtgctctttcgtggagcaccggaactacnaggtcgtctacaggcgctacgcctccc 95
                ||||||| ||||||||||||||||| |||||| |||| || ||| |||||||||||||||
Sbjct: 11030016 tgcagtgttctttcgtggagcaccgcaactacaaggtggtgtaccggcgctacgcctccc 11029957

                                                
Query: 96       tcttcttcctcgtcggcgtggacnacgatgag 127
                |||||||||| |||||||| ||| ||||||||
Sbjct: 11029956 tcttcttcctagtcggcgtcgacaacgatgag 11029925
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  115 bits (58), Expect = 2e-22
 Identities = 83/92 (90%)
 Strand = Plus / Minus

                                                                            
Query: 36       tgcagtgctctttcgtggagcaccggaactacnaggtcgtctacaggcgctacgcctccc 95
                ||||||| ||||||||||||||||| |||||| |||| || ||| |||||||||||||||
Sbjct: 11036456 tgcagtgttctttcgtggagcaccgcaactacaaggtggtgtaccggcgctacgcctccc 11036397

                                                
Query: 96       tcttcttcctcgtcggcgtggacnacgatgag 127
                |||||||||| |||||||| ||| ||||||||
Sbjct: 11036396 tcttcttcctagtcggcgtcgacaacgatgag 11036365
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>gb|AY105951.1| Zea mays PCO080381 mRNA sequence
          Length = 826

 Score =  113 bits (57), Expect = 6e-22
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                       
Query: 37  gcagtgctctttcgtggagcaccggaactacnaggtcgtctacaggcgctacgcctccct 96
           |||||| || || |||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 256 gcagtgttcgtttgtggagcaccggaactacaaggtcgtttacaggcgctacgcctccct 315

                                          
Query: 97  cttcttcctcgtcggcgtggacnacgatgag 127
            ||||||||||||||||| |||  |||||||
Sbjct: 316 tttcttcctcgtcggcgtcgacagcgatgag 346
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>ref|NM_196093.1| Oryza sativa (japonica cultivar-group) putative clathrin assembly
           protein (OSJNBa0083M08.3), mRNA
          Length = 622

 Score =  111 bits (56), Expect = 2e-21
 Identities = 81/90 (90%)
 Strand = Plus / Plus

                                                                       
Query: 38  cagtgctctttcgtggagcaccggaactacnaggtcgtctacaggcgctacgcctccctc 97
           ||||| ||||||||||||||||| |||||| |||| || ||| |||||||||||||||||
Sbjct: 152 cagtgttctttcgtggagcaccgcaactacaaggtggtgtaccggcgctacgcctccctc 211

                                         
Query: 98  ttcttcctcgtcggcgtggacnacgatgag 127
           |||||||| |||||||| ||| ||||||||
Sbjct: 212 ttcttcctagtcggcgtcgacaacgatgag 241
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>dbj|AK120131.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026P11, full
           insert sequence
          Length = 761

 Score =  111 bits (56), Expect = 2e-21
 Identities = 81/90 (90%)
 Strand = Plus / Plus

                                                                       
Query: 38  cagtgctctttcgtggagcaccggaactacnaggtcgtctacaggcgctacgcctccctc 97
           ||||| ||||||||||||||||| |||||| |||| || ||| |||||||||||||||||
Sbjct: 191 cagtgttctttcgtggagcaccgcaactacaaggtggtgtaccggcgctacgcctccctc 250

                                         
Query: 98  ttcttcctcgtcggcgtggacnacgatgag 127
           |||||||| |||||||| ||| ||||||||
Sbjct: 251 ttcttcctagtcggcgtcgacaacgatgag 280
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  107 bits (54), Expect = 4e-20
 Identities = 82/92 (89%)
 Strand = Plus / Plus

                                                                            
Query: 36       tgcagtgctctttcgtggagcaccggaactacnaggtcgtctacaggcgctacgcctccc 95
                ||||||| || ||||||||||||||||||||| |||| || ||| |||| ||||| ||||
Sbjct: 18772711 tgcagtgttcgttcgtggagcaccggaactacaaggtggtgtaccggcggtacgcttccc 18772770

                                                
Query: 96       tcttcttcctcgtcggcgtggacnacgatgag 127
                ||||||||||||||||||| ||| ||||||||
Sbjct: 18772771 tcttcttcctcgtcggcgtcgacaacgatgag 18772802



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 78/88 (88%)
 Strand = Plus / Plus

                                                                            
Query: 36       tgcagtgctctttcgtggagcaccggaactacnaggtcgtctacaggcgctacgcctccc 95
                ||||||| || ||||||||||||||||||||| |||| || ||| |||| ||||| ||||
Sbjct: 18751734 tgcagtgttcgttcgtggagcaccggaactacaaggtggtgtaccggcggtacgcttccc 18751793

                                            
Query: 96       tcttcttcctcgtcggcgtggacnacga 123
                ||||||||||||||||||| ||| ||||
Sbjct: 18751794 tcttcttcctcgtcggcgtcgacaacga 18751821
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>dbj|AP003880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1123_G08
          Length = 146944

 Score =  107 bits (54), Expect = 4e-20
 Identities = 82/92 (89%)
 Strand = Plus / Plus

                                                                         
Query: 36    tgcagtgctctttcgtggagcaccggaactacnaggtcgtctacaggcgctacgcctccc 95
             ||||||| || ||||||||||||||||||||| |||| || ||| |||| ||||| ||||
Sbjct: 76160 tgcagtgttcgttcgtggagcaccggaactacaaggtggtgtaccggcggtacgcttccc 76219

                                             
Query: 96    tcttcttcctcgtcggcgtggacnacgatgag 127
             ||||||||||||||||||| ||| ||||||||
Sbjct: 76220 tcttcttcctcgtcggcgtcgacaacgatgag 76251



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 78/88 (88%)
 Strand = Plus / Plus

                                                                         
Query: 36    tgcagtgctctttcgtggagcaccggaactacnaggtcgtctacaggcgctacgcctccc 95
             ||||||| || ||||||||||||||||||||| |||| || ||| |||| ||||| ||||
Sbjct: 55183 tgcagtgttcgttcgtggagcaccggaactacaaggtggtgtaccggcggtacgcttccc 55242

                                         
Query: 96    tcttcttcctcgtcggcgtggacnacga 123
             ||||||||||||||||||| ||| ||||
Sbjct: 55243 tcttcttcctcgtcggcgtcgacaacga 55270
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>gb|BT017687.1| Zea mays clone EL01N0444B12.c mRNA sequence
          Length = 566

 Score =  105 bits (53), Expect = 1e-19
 Identities = 81/91 (89%)
 Strand = Plus / Plus

                                                                       
Query: 37  gcagtgctctttcgtggagcaccggaactacnaggtcgtctacaggcgctacgcctccct 96
           |||||| || || |||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 100 gcagtgttcgtttgtggagcaccggaactacaaggtcgtttacaggcgctacgcctccct 159

                                          
Query: 97  cttcttcctcgtcggcgtggacnacgatgag 127
            |||||||| |||||||| |||  |||||||
Sbjct: 160 tttcttccttgtcggcgtcgacagcgatgag 190
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>ref|XM_482218.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 432

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 77/87 (88%)
 Strand = Plus / Plus

                                                                       
Query: 37  gcagtgctctttcgtggagcaccggaactacnaggtcgtctacaggcgctacgcctccct 96
           |||||| || ||||||||||||||||||||| |||| || ||| |||| ||||| |||||
Sbjct: 138 gcagtgttcgttcgtggagcaccggaactacaaggtggtgtaccggcggtacgcttccct 197

                                      
Query: 97  cttcttcctcgtcggcgtggacnacga 123
           |||||||||||||||||| ||| ||||
Sbjct: 198 cttcttcctcgtcggcgtcgacaacga 224
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 79/90 (87%)
 Strand = Plus / Minus

                                                                            
Query: 126      agcaaccgagctgctgcatttctgcagctggttaagcttaataaggcacttgctgatgct 185
                ||||| || |||||||||||||| || || |||||||||||||||||||| |||||||||
Sbjct: 25564829 agcaatcgggctgctgcatttctccatctagttaagcttaataaggcactcgctgatgct 25564770

                                              
Query: 186      gagatgacnataaaactcangccagaatgg 215
                || | ||| |||||||||| |||| |||||
Sbjct: 25564769 gatacgacaataaaactcaagccacaatgg 25564740



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 91      ctccctcttcttcctcgtcg 110
               ||||||||||||||||||||
Sbjct: 4301264 ctccctcttcttcctcgtcg 4301283
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>dbj|AK073324.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030G12, full
           insert sequence
          Length = 1293

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                       
Query: 126 agcaaccgagctgctgcatttctgcagctggttaagcttaataaggcacttgctgatgct 185
           ||||| || |||||||||||||| || || |||||||||||||||||||| |||||||||
Sbjct: 245 agcaatcgggctgctgcatttctccatctagttaagcttaataaggcactcgctgatgct 304

                                         
Query: 186 gagatgacnataaaactcangccagaatgg 215
           || | ||| |||||||||| |||| |||||
Sbjct: 305 gatacgacaataaaactcaagccacaatgg 334
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 79/90 (87%)
 Strand = Plus / Minus

                                                                            
Query: 126      agcaaccgagctgctgcatttctgcagctggttaagcttaataaggcacttgctgatgct 185
                ||||| || |||||||||||||| || || |||||||||||||||||||| |||||||||
Sbjct: 25493005 agcaatcgggctgctgcatttctccatctagttaagcttaataaggcactcgctgatgct 25492946

                                              
Query: 186      gagatgacnataaaactcangccagaatgg 215
                || | ||| |||||||||| |||| |||||
Sbjct: 25492945 gatacgacaataaaactcaagccacaatgg 25492916



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 91      ctccctcttcttcctcgtcg 110
               ||||||||||||||||||||
Sbjct: 4301251 ctccctcttcttcctcgtcg 4301270
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>emb|AL928781.4|CNS08CCB Oryza sativa chromosome 12, . BAC OSJNBa0070E09 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 144084

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 79/90 (87%)
 Strand = Plus / Minus

                                                                          
Query: 126    agcaaccgagctgctgcatttctgcagctggttaagcttaataaggcacttgctgatgct 185
              ||||| || |||||||||||||| || || |||||||||||||||||||| |||||||||
Sbjct: 134211 agcaatcgggctgctgcatttctccatctagttaagcttaataaggcactcgctgatgct 134152

                                            
Query: 186    gagatgacnataaaactcangccagaatgg 215
              || | ||| |||||||||| |||| |||||
Sbjct: 134151 gatacgacaataaaactcaagccacaatgg 134122
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>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 127003

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                          
Query: 126    agcaaccgagctgctgcatttctgcagctggttaagcttaataaggcacttgctgatgct 185
              ||||| || |||||||||||||| || || |||||||||||||||||||| |||||||||
Sbjct: 108889 agcaatcgggctgctgcatttctccatctagttaagcttaataaggcactcgctgatgct 108948

                                            
Query: 186    gagatgacnataaaactcangccagaatgg 215
              || | ||| |||||||||| |||| |||||
Sbjct: 108949 gatacgacaataaaactcaagccacaatgg 108978
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>dbj|AK062082.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-F11, full
           insert sequence
          Length = 968

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                       
Query: 383 aaggaccactggttgggatcaatacccacaggggcggtggggtgattccnggaacccatc 442
           |||||||  ||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 5   aaggacccttggttgggatcaatacccacatgggcggtggggtgattcccggaacccatc 64

                               
Query: 443 anacggagcccttagtgact 462
             | ||||| |||| |||||
Sbjct: 65  gtatggagcacttactgact 84
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>gb|AC020912.6| Homo sapiens chromosome 19 clone CTD-2583G20, complete sequence
          Length = 163225

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 469    atttcattgtcttgttgtttga 490
              ||||||||||||||||||||||
Sbjct: 107943 atttcattgtcttgttgtttga 107922
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>gb|AC142145.3| Mus musculus BAC clone RP24-69D13 from chromosome 8, complete sequence
          Length = 169014

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 277    ttcaagaacattaccttggagggca 301
              ||||||||||||||||| |||||||
Sbjct: 120828 ttcaagaacattaccttagagggca 120852
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>ref|NM_011941.2| Mus musculus mitogen activated protein kinase binding protein 1
            (Mapkbp1), mRNA
          Length = 6943

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 89   gcctccctcttcttcctcgtc 109
            |||||||||||||||||||||
Sbjct: 3485 gcctccctcttcttcctcgtc 3465
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>gb|BC011271.1| Mus musculus mitogen activated protein kinase binding protein 1,
           mRNA (cDNA clone IMAGE:3710689), partial cds
          Length = 4060

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 89  gcctccctcttcttcctcgtc 109
           |||||||||||||||||||||
Sbjct: 615 gcctccctcttcttcctcgtc 595
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>gb|BC070449.1| Mus musculus mitogen activated protein kinase binding protein 1, mRNA
            (cDNA clone MGC:91383 IMAGE:30543913), complete cds
          Length = 6943

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 89   gcctccctcttcttcctcgtc 109
            |||||||||||||||||||||
Sbjct: 3485 gcctccctcttcttcctcgtc 3465
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>dbj|AK122323.1| Mus musculus mRNA for mKIAA0596 protein
          Length = 6222

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 89   gcctccctcttcttcctcgtc 109
            |||||||||||||||||||||
Sbjct: 2184 gcctccctcttcttcctcgtc 2164
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>emb|AL157792.3|CNS01RG7 Human chromosome 14 DNA sequence BAC R-388M7 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 194760

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 501   attgtattcataaacagtttt 521
             |||||||||||||||||||||
Sbjct: 18200 attgtattcataaacagtttt 18220
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>gb|AC133655.4| Mus musculus BAC clone RP24-364H7 from 8, complete sequence
          Length = 177145

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 277   ttcaagaacattaccttggagggca 301
             ||||||||||||||||| |||||||
Sbjct: 36583 ttcaagaacattaccttagagggca 36607
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>dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT40C04, TM0199,
             complete sequence
          Length = 123325

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 90    cctccctcttcttcctcgtcg 110
             |||||||||||||||||||||
Sbjct: 60701 cctccctcttcttcctcgtcg 60681
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>emb|AL833774.4| Mouse DNA sequence from clone RP23-383I16 on chromosome 2, complete
              sequence
          Length = 194045

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 89     gcctccctcttcttcctcgtc 109
              |||||||||||||||||||||
Sbjct: 165600 gcctccctcttcttcctcgtc 165620
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>dbj|AB029482.1| Mus musculus mRNA for JNK-binding protein JNKBP1, complete cds
          Length = 4684

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 89   gcctccctcttcttcctcgtc 109
            |||||||||||||||||||||
Sbjct: 3299 gcctccctcttcttcctcgtc 3279
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>ref|NM_100608.2| Arabidopsis thaliana ATSTP2; carbohydrate transporter/ sugar porter
           AT1G07340 (ATSTP2) mRNA, complete cds
          Length = 1685

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 88  cgcctccctcttcttcctcgtcgg 111
           ||||||| ||||||||||||||||
Sbjct: 393 cgcctccatcttcttcctcgtcgg 416
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>ref|NM_127537.2| Arabidopsis thaliana unknown protein AT2G19790 mRNA, complete cds
          Length = 631

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 43/51 (84%)
 Strand = Plus / Plus

                                                              
Query: 53  gagcaccggaactacnaggtcgtctacaggcgctacgcctccctcttcttc 103
           ||||| || |||||| || | ||||||||||| ||||| || |||||||||
Sbjct: 225 gagcatcgcaactacaagatagtctacaggcgttacgcatctctcttcttc 275
to top
>ref|XM_654665.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2153.2), mRNA
          Length = 975

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 86  tacgcctccctcttcttcct 105
           ||||||||||||||||||||
Sbjct: 243 tacgcctccctcttcttcct 262
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>gb|AC084784.3| Homo sapiens chromosome 3 clone CTD-2576J21 map q21.3, complete
             sequence
          Length = 212399

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   tctgtgagcagggccaacag 364
             ||||||||||||||||||||
Sbjct: 85833 tctgtgagcagggccaacag 85814
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>gb|AY059143.1| Arabidopsis thaliana putative clathrin assembly protein (At2g19790)
           mRNA, complete cds
          Length = 463

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 43/51 (84%)
 Strand = Plus / Plus

                                                              
Query: 53  gagcaccggaactacnaggtcgtctacaggcgctacgcctccctcttcttc 103
           ||||| || |||||| || | ||||||||||| ||||| || |||||||||
Sbjct: 154 gagcatcgcaactacaagatagtctacaggcgttacgcatctctcttcttc 204
to top
>gb|AF370185.1| Arabidopsis thaliana putative clathrin assembly protein (At2g19790)
           mRNA, complete cds
          Length = 645

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 43/51 (84%)
 Strand = Plus / Plus

                                                              
Query: 53  gagcaccggaactacnaggtcgtctacaggcgctacgcctccctcttcttc 103
           ||||| || |||||| || | ||||||||||| ||||| || |||||||||
Sbjct: 223 gagcatcgcaactacaagatagtctacaggcgttacgcatctctcttcttc 273
to top
>gb|AC022884.12| Homo sapiens chromosome 18, clone RP11-449D8, complete sequence
          Length = 195139

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 274   gatttcaagaacattacctt 293
             ||||||||||||||||||||
Sbjct: 10272 gatttcaagaacattacctt 10291
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>emb|AL449217.1|HS197B24 Homo sapiens chromosome 3 sequence from BAC 197B24 map 3q21 region
             D3S3607-D3S1587, complete sequence
          Length = 129688

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   tctgtgagcagggccaacag 364
             ||||||||||||||||||||
Sbjct: 91842 tctgtgagcagggccaacag 91861
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>emb|CR385074.10| Zebrafish DNA sequence from clone CH211-258K6 in linkage group 23,
             complete sequence
          Length = 163114

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   ctgctgcatttctgcagctg 155
             ||||||||||||||||||||
Sbjct: 53843 ctgctgcatttctgcagctg 53824
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>emb|BX470070.27| Zebrafish DNA sequence from clone CH211-194B21 in linkage group 15,
              complete sequence
          Length = 228177

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 475    ttgtcttgttgtttgaatct 494
              ||||||||||||||||||||
Sbjct: 176148 ttgtcttgttgtttgaatct 176129
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>gb|DQ424897.1| Striga asiatica histidine kinase SHK278 mRNA, complete cds
          Length = 3009

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 169  aggcacttgctgatgctgag 188
            ||||||||||||||||||||
Sbjct: 2027 aggcacttgctgatgctgag 2008
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>gb|AC005169.3| Arabidopsis thaliana chromosome 2 clone F6F22 map mi148, complete
             sequence
          Length = 126386

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 43/51 (84%)
 Strand = Plus / Minus

                                                                
Query: 53    gagcaccggaactacnaggtcgtctacaggcgctacgcctccctcttcttc 103
             ||||| || |||||| || | ||||||||||| ||||| || |||||||||
Sbjct: 95561 gagcatcgcaactacaagatagtctacaggcgttacgcatctctcttcttc 95511
to top
>gb|AC018697.4| Homo sapiens BAC clone RP11-577J12 from 18, complete sequence
          Length = 180562

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 274    gatttcaagaacattacctt 293
              ||||||||||||||||||||
Sbjct: 173276 gatttcaagaacattacctt 173295
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 91      ctccctcttcttcctcgtcg 110
               ||||||||||||||||||||
Sbjct: 3771247 ctccctcttcttcctcgtcg 3771228
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>emb|BX813610.1|CNS0AALW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB27ZG10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1690

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 88  cgcctccctcttcttcctcgtcgg 111
           ||||||| ||||||||||||||||
Sbjct: 391 cgcctccatcttcttcctcgtcgg 414
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>gb|AC022464.4|AC022464 Genomic sequence for Arabidopsis thaliana BAC F22G5 from chromosome I,
             complete sequence
          Length = 104830

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 88    cgcctccctcttcttcctcgtcgg 111
             ||||||| ||||||||||||||||
Sbjct: 88763 cgcctccatcttcttcctcgtcgg 88740
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>gb|AF188029.5| Homo sapiens chromosome 8 clone GS1-56L10 map p22-p21, complete
             sequence
          Length = 106784

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 133   gagctgctgcatttctgcagctgg 156
             ||||||||||||||||| ||||||
Sbjct: 82931 gagctgctgcatttctgtagctgg 82954
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>gb|AC112642.8| Homo sapiens 3 BAC RP11-515I14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 186239

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   tctgtgagcagggccaacag 364
             ||||||||||||||||||||
Sbjct: 78865 tctgtgagcagggccaacag 78846
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>gb|AY088273.1| Arabidopsis thaliana clone 5064 mRNA, complete sequence
          Length = 629

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 43/51 (84%)
 Strand = Plus / Plus

                                                              
Query: 53  gagcaccggaactacnaggtcgtctacaggcgctacgcctccctcttcttc 103
           ||||| || |||||| || | ||||||||||| ||||| || |||||||||
Sbjct: 225 gagcatcgcaactacaagatagtctacaggcgttacgcatctctcttcttc 275
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>gb|AC135352.6| Homo sapiens chromosome 8, clone RP11-369K16, complete sequence
          Length = 133950

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 133   gagctgctgcatttctgcagctgg 156
             ||||||||||||||||| ||||||
Sbjct: 44186 gagctgctgcatttctgtagctgg 44209
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>gb|AC167140.1| Mus musculus BAC clone RP24-482O17 from chromosome 14, complete
             sequence
          Length = 143541

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 391   ctggttgggatcaataccca 410
             ||||||||||||||||||||
Sbjct: 31313 ctggttgggatcaataccca 31332
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>dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0496D04
          Length = 197358

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    ctccctcttcttcctcgtcg 110
             ||||||||||||||||||||
Sbjct: 10359 ctccctcttcttcctcgtcg 10340
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>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0050F10
          Length = 151986

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     ctccctcttcttcctcgtcg 110
              ||||||||||||||||||||
Sbjct: 115598 ctccctcttcttcctcgtcg 115579
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>dbj|BS000021.1| Pan troglodytes chromosome 22 clone:PTB-141K15, map 22, complete
             sequences
          Length = 183533

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 505   tattcataaacagttttgca 524
             ||||||||||||||||||||
Sbjct: 97500 tattcataaacagttttgca 97481
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>gb|AE000657.1| Aquifex aeolicus VF5, complete genome
          Length = 1551335

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 92      tccctcttcttcctcgtcgg 111
               ||||||||||||||||||||
Sbjct: 1031504 tccctcttcttcctcgtcgg 1031485
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>emb|BX001060.3|CNS08CE8 Oryza sativa chromosome 12, . BAC OSJNBa0056M17 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 178147

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     ctccctcttcttcctcgtcg 110
              ||||||||||||||||||||
Sbjct: 150447 ctccctcttcttcctcgtcg 150428
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>emb|CT025563.11| Mouse DNA sequence from clone RP23-472D20 on chromosome 14, complete
             sequence
          Length = 174286

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 391   ctggttgggatcaataccca 410
             ||||||||||||||||||||
Sbjct: 47757 ctggttgggatcaataccca 47738
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>emb|AL672070.12| Mouse DNA sequence from clone RP23-115A1 on chromosome 9, complete
              sequence
          Length = 197912

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    accgagctgctgcatttctg 149
              ||||||||||||||||||||
Sbjct: 128742 accgagctgctgcatttctg 128761


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,682,388
Number of Sequences: 3902068
Number of extensions: 3682388
Number of successful extensions: 69217
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68824
Number of HSP's gapped (non-prelim): 393
length of query: 527
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 504
effective length of database: 17,143,297,704
effective search space: 8640222042816
effective search space used: 8640222042816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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