>ref|NM_191228.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 951

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                            
Query: 128 actgcagcaccggcacggactcgccgcgggcggactccgtcgacgagca 176
           |||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 53  actgcagcgccggcacggactcgccgcgggcggagtccgtcgacgagca 101

>tpg|BK005016.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY
           transcription factor 13 (WRKY13) gene, complete cds
          Length = 1195

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                            
Query: 128 actgcagcaccggcacggactcgccgcgggcggactccgtcgacgagca 176
           |||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 53  actgcagcgccggcacggactcgccgcgggcggagtccgtcgacgagca 101

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 47/49 (95%)
 Strand = Plus / Minus

                                                                 
Query: 128      actgcagcaccggcacggactcgccgcgggcggactccgtcgacgagca 176
                |||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 31403676 actgcagcgccggcacggactcgccgcgggcggagtccgtcgacgagca 31403628

>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0481E12
          Length = 161563

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 47/49 (95%)
 Strand = Plus / Minus

                                                               
Query: 128    actgcagcaccggcacggactcgccgcgggcggactccgtcgacgagca 176
              |||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 157959 actgcagcgccggcacggactcgccgcgggcggagtccgtcgacgagca 157911

>dbj|AK099515.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030B06, full
           insert sequence
          Length = 1069

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                            
Query: 128 actgcagcaccggcacggactcgccgcgggcggactccgtcgacgagca 176
           |||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 290 actgcagcgccggcacggactcgccgcgggcggagtccgtcgacgagca 338

>dbj|AK067329.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100D22, full
           insert sequence
          Length = 1233

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                            
Query: 128 actgcagcaccggcacggactcgccgcgggcggactccgtcgacgagca 176
           |||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 229 actgcagcgccggcacggactcgccgcgggcggagtccgtcgacgagca 277

>dbj|AK060018.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G04, full
           insert sequence
          Length = 1294

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                            
Query: 128 actgcagcaccggcacggactcgccgcgggcggactccgtcgacgagca 176
           |||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 actgcagcgccggcacggactcgccgcgggcggagtccgtcgacgagca 369

>gb|AY870602.1| Oryza sativa (japonica cultivar-group) WRKY13 mRNA, complete cds
          Length = 1076

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                            
Query: 128 actgcagcaccggcacggactcgccgcgggcggactccgtcgacgagca 176
           |||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 115 actgcagcgccggcacggactcgccgcgggcggagtccgtcgacgagca 163

>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 179     cgcccgccgacgccgagtcgcccggcgg 206
               |||||| ||||| |||||||||||||||
Sbjct: 1240349 cgcccggcgacgacgagtcgcccggcgg 1240376

>gb|AC124598.5| Mus musculus BAC clone RP23-22P3 from 13, complete sequence
          Length = 220624

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   cccctcgccgtcgtccccgc 247
             ||||||||||||||||||||
Sbjct: 79306 cccctcgccgtcgtccccgc 79325

>gb|AF527803.1| Homo sapiens cyclin-dependent kinase inhibitor 2A (CDKN2A) gene,
             complete cds, alternatively spliced
          Length = 28770

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 199   cccggcggaggccagagcaagcgcgacc 226
             ||||||||||| ||||| ||||||||||
Sbjct: 26331 cccggcggagggcagagaaagcgcgacc 26304

>emb|AL449423.14| Human DNA sequence from clone RP11-149I2 on chromosome 9 Contains the
             CDKN2A gene for cyclin-dependent kinase inhibitor 2A
             (melanoma, p16, inhibits CDK4), the gene for
             susceptibility protein NSG-x (LOC51198), the 5' end of a
             variant of the MTAP gene for methylthioadenosine
             phosphorylase (MSAP), the 3' end of the CDKN2B gene for
             cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)
             and 4 CpG islands, complete sequence
          Length = 101155

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 199   cccggcggaggccagagcaagcgcgacc 226
             ||||||||||| ||||| ||||||||||
Sbjct: 59224 cccggcggagggcagagaaagcgcgacc 59251

>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 176     agccgcccgccgacgccgag 195
               ||||||||||||||||||||
Sbjct: 2164636 agccgcccgccgacgccgag 2164617

>dbj|AK141282.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:C430019C18 product:similar to
           Autosomal highly conserved protein (Similar to family
           with sequence similarity 8, member A1) [Homo sapiens],
           full insert sequence
          Length = 1383

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 228 cccctcgccgtcgtccccgc 247
           ||||||||||||||||||||
Sbjct: 476 cccctcgccgtcgtccccgc 495

>dbj|AK171039.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630220J19
           product:similar to Autosomal highly conserved protein
           (Similar to family with sequence similarity 8, member
           A1) [Homo sapiens], full insert sequence
          Length = 1284

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 228 cccctcgccgtcgtccccgc 247
           ||||||||||||||||||||
Sbjct: 508 cccctcgccgtcgtccccgc 527

>gb|AC000048.4| Homo sapiens Chromosome 9p21 Cosmid Clone c66, complete sequence
          Length = 34669

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 199   cccggcggaggccagagcaagcgcgacc 226
             ||||||||||| ||||| ||||||||||
Sbjct: 22397 cccggcggagggcagagaaagcgcgacc 22424

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 164      ccgtcgacgagcagccgcccgccg 187
                |||||||||||| |||||||||||
Sbjct: 25451322 ccgtcgacgagccgccgcccgccg 25451299

>ref|NM_001033192.1| Mus musculus expressed sequence C78339 (C78339), mRNA
          Length = 1383

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 228 cccctcgccgtcgtccccgc 247
           ||||||||||||||||||||
Sbjct: 476 cccctcgccgtcgtccccgc 495

>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1056G08
          Length = 168173

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 164    ccgtcgacgagcagccgcccgccg 187
              |||||||||||| |||||||||||
Sbjct: 144412 ccgtcgacgagccgccgcccgccg 144389

>dbj|AP004308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0552F09
          Length = 134659

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 164   ccgtcgacgagcagccgcccgccg 187
             |||||||||||| |||||||||||
Sbjct: 75039 ccgtcgacgagccgccgcccgccg 75016

>dbj|AB060808.1| Homo sapiens gene for p16/CDKN2A, complete cds
          Length = 250000

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 199    cccggcggaggccagagcaagcgcgacc 226
              ||||||||||| ||||| ||||||||||
Sbjct: 185871 cccggcggagggcagagaaagcgcgacc 185898


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,572,465
Number of Sequences: 3902068
Number of extensions: 1572465
Number of successful extensions: 33418
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33247
Number of HSP's gapped (non-prelim): 171
length of query: 260
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 238
effective length of database: 17,147,199,772
effective search space: 4081033545736
effective search space used: 4081033545736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)