Clone Name | bart09a09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AMOT_HUMAN (Q4VCS5) Angiomotin | 31 | 1.0 | 2 | OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-b... | 28 | 6.5 | 3 | HR4_DROME (Q9W539) Hormone receptor 4 (dHR4) | 28 | 6.5 | 4 | DNMT1_MOUSE (P13864) DNA (cytosine-5)-methyltransferase 1 (EC 2.... | 28 | 8.5 |
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>AMOT_HUMAN (Q4VCS5) Angiomotin| Length = 1084 Score = 30.8 bits (68), Expect = 1.0 Identities = 17/58 (29%), Positives = 28/58 (48%) Frame = -3 Query: 175 DEAEQEDVRQVPDPGALARGQHRQQRHHDGEQHRLRCEVGREQELQSPLQPRGNHIAA 2 ++A Q D ++ PG + Q +QQ+HH H ++Q+ Q P Q G +A Sbjct: 359 NQAHQGDHYRLSQPGLSQQQQQQQQQHHHHHHH-------QQQQQQQPQQQPGEAYSA 409
>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind) (L(1)omb)| (Protein bifid) Length = 972 Score = 28.1 bits (61), Expect = 6.5 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -3 Query: 124 ARGQHRQQRHHDGEQHRLRCEVGREQELQSPLQPRGNH 11 A+ H Q HH +QH+ ++Q Q P QP +H Sbjct: 921 AQHHHHTQAHHQQQQHQSH---HQQQHHQQPAQPHPHH 955
>HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)| Length = 1518 Score = 28.1 bits (61), Expect = 6.5 Identities = 15/61 (24%), Positives = 29/61 (47%) Frame = -3 Query: 211 FGVPLAEHAVGDDEAEQEDVRQVPDPGALARGQHRQQRHHDGEQHRLRCEVGREQELQSP 32 + V +H + + +Q+ +Q A + +QQ+H +QH ++Q+L SP Sbjct: 1009 YKVKYKKHKKTNQKQQQQAAQQQQQQAAAQQQHQQQQQHQQHQQH-------QQQQLHSP 1061 Query: 31 L 29 L Sbjct: 1062 L 1062
>DNMT1_MOUSE (P13864) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Dnmt1)| (DNA methyltransferase MmuI) (DNA MTase MmuI) (MCMT) (M.MmuI) (Met-1) Length = 1620 Score = 27.7 bits (60), Expect = 8.5 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -3 Query: 199 LAEHAVGDDEAEQEDVRQVPDPGALARGQHRQQ 101 LA DDE +DV ++P P L +G+ ++Q Sbjct: 697 LAVKEADDDEEADDDVSEMPSPKKLHQGKKKKQ 729 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.136 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,119,209 Number of Sequences: 219361 Number of extensions: 391951 Number of successful extensions: 1487 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1413 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1475 length of database: 80,573,946 effective HSP length: 46 effective length of database: 70,483,340 effective search space used: 1691600160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits)