Clone Name	bart09a03
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|DQ023305.1| Aegilops tauschii beta1 proteasome-7D mRNA, compl...	545	e-152
2	dbj|AK104152.1| Oryza sativa (japonica cultivar-group) cDNA clon...	478	e-132
3	ref|XM_507536.1| PREDICTED Oryza sativa (japonica cultivar-group...	448	e-123
4	ref|XM_468000.1| Oryza sativa (japonica cultivar-group), mRNA	448	e-123
5	ref|XM_506995.2| PREDICTED Oryza sativa (japonica cultivar-group...	448	e-123
6	dbj|AK104505.1| Oryza sativa (japonica cultivar-group) cDNA clon...	448	e-123
7	dbj|AK103425.1| Oryza sativa (japonica cultivar-group) cDNA clon...	448	e-123
8	dbj|AK059837.1| Oryza sativa (japonica cultivar-group) cDNA clon...	448	e-123
9	dbj|AB026563.1| Oryza sativa (japonica cultivar-group) OsPBA1 mR...	448	e-123
10	gb|AY103685.1| Zea mays PCO069906 mRNA sequence	385	e-103
11	gb|DQ023303.1| Aegilops tauschii beta1 proteasome-1D gene, compl...	220	3e-54
12	gb|DQ023304.1| Aegilops tauschii beta1 proteasome-7D gene, compl...	184	2e-43
13	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	157	4e-35
14	dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic D...	157	4e-35
15	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	135	2e-28
16	dbj|AP004080.3| Oryza sativa (japonica cultivar-group) genomic D...	135	2e-28
17	emb|Y09505.1|NTY09505 N.tabacum mRNA for delta proteasome subunit	121	2e-24
18	ref|NM_119279.3| Arabidopsis thaliana PBA1; endopeptidase/ pepti...	111	2e-21
19	ref|NM_001036682.1| Arabidopsis thaliana PBA1; endopeptidase/ pe...	111	2e-21
20	emb|Y13694.1|ATY13694 Arabidopsis thaliana mRNA for proteasome s...	111	2e-21
21	gb|AY058240.1| Arabidopsis thaliana AT4g31300/F8F16_120 mRNA, co...	111	2e-21
22	gb|AY052354.1| Arabidopsis thaliana AT4g31300/F8F16_120 mRNA, co...	111	2e-21
23	emb|BX829148.1|CNS0A2OL Arabidopsis thaliana Full-length cDNA Co...	111	2e-21
24	emb|BX828596.1|CNS0A2KF Arabidopsis thaliana Full-length cDNA Co...	111	2e-21
25	emb|BX841557.1|CNS09YGA Arabidopsis thaliana Full-length cDNA Co...	111	2e-21
26	emb|BX841537.1|CNS09YG8 Arabidopsis thaliana Full-length cDNA Co...	111	2e-21
27	gb|AY086241.1| Arabidopsis thaliana clone 229 mRNA, complete seq...	111	2e-21
28	gb|AF043529.1|AF043529 Arabidopsis thaliana 20S proteasome subun...	111	2e-21
29	gb|AY518884.1| Brassica napus putative proteasome 20S beta1 subu...	101	2e-18
30	gb|AY518885.1| Brassica napus putative proteasome 20S beta1.1 su...	86	1e-13
31	emb|AL161578.2|ATCHRIV74 Arabidopsis thaliana DNA chromosome 4, ...	76	1e-10
32	emb|AL021633.2|ATF8F16 Arabidopsis thaliana DNA chromosome 4, BA...	76	1e-10
33	emb|AJ586793.1| Humulus lupulus microsatellite DNA, clone EMFV021	70	8e-09
34	emb|Z99979.1|MAZ99979 Musa acuminata mRNA for unknown ripening-r...	66	1e-07
35	emb|CR940307.5| M.truncatula DNA sequence from clone MTH2-21G21 ...	56	1e-04
36	gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequ...	48	0.028
37	ref|XM_662679.1| Cryptosporidium hominis TU502 proteasome B type...	44	0.44
38	emb|AL109630.2|DMBR7A4 Drosophila melanogaster BAC clone BACR7A4	44	0.44
39	emb|BX571738.12| Zebrafish DNA sequence from clone CH211-64K10 i...	44	0.44
40	gb|AC104287.8| Drosophila melanogaster X BAC RP98-29P19 (Roswell...	44	0.44
41	gb|AC097726.4| Drosophila melanogaster X BAC RP98-5N14 (Roswell ...	44	0.44
42	ref|XM_626319.1| Cryptosporidium parvum Iowa II Pre3p/proteasome...	44	0.44
43	gb|AF097521.1|AF097521 Cryptosporidium parvum proteasome B type ...	44	0.44
44	gb|AE003419.2| Drosophila melanogaster chromosome X, section 3 o...	44	0.44
45	emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete ...	42	1.7
46	gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome	42	1.7
47	gb|AF104994.1|AF104994 Streptomyces coelicolor A3(2) periplasmic...	42	1.7
48	ref|NM_188321.1| Oryza sativa (japonica cultivar-group), predic...	40	6.8
49	ref|XM_464899.1| Oryza sativa (japonica cultivar-group), mRNA	40	6.8
50	gb|AC117264.2| Oryza sativa (japonica cultivar-group) chromosome...	40	6.8
51	gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome	40	6.8
52	gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co...	40	6.8
53	gb|AC183432.1| Ornithorhynchus anatinus BAC clone OABb-35B8 from...	40	6.8
54	emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos...	40	6.8
55	emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete ...	40	6.8
56	dbj|AB121977.1| Xanthobacter polyaromaticivorans dbd gene cluste...	40	6.8
57	gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp...	40	6.8
58	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	40	6.8
59	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	40	6.8
60	gb|AF245428.1|AF245428 Buxus liukiuensis 18S ribosomal RNA gene,...	40	6.8
61	gb|AF245414.1|AF245414 Buxus microphylla subsp. sinica 18S ribos...	40	6.8
62	gb|AF245413.1|AF245413 Buxus riparia 18S ribosomal RNA gene, par...	40	6.8
63	gb|AF245412.1|AF245412 Buxus microphylla var. japonica 18S ribos...	40	6.8
64	dbj|AP003105.2| Oryza sativa (japonica cultivar-group) genomic D...	40	6.8
65	dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic D...	40	6.8
66	dbj|AP005777.2| Oryza sativa (japonica cultivar-group) genomic D...	40	6.8
67	dbj|AK120469.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	6.8
68	dbj|AK108155.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	6.8
69	emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome	40	6.8
70	emb|AL831776.3| Mouse DNA sequence from clone RP23-307M2 on chro...	40	6.8

---

>gb|DQ023305.1| Aegilops tauschii beta1 proteasome-7D mRNA, complete cds
          Length = 1029

 Score =  545 bits (275), Expect = e-152
 Identities = 383/418 (91%), Gaps = 6/418 (1%)
 Strand = Plus / Plus

                                                                       
Query: 92  ccgccatggacgccgcctc---gctcatgggc---ccctcctctgccgacgcgcccaccg 145
           |||||||||||||||||||   ||||||||||   |||||||| ||||||||||||||||
Sbjct: 83  ccgccatggacgccgcctcctcgctcatgggcggcccctcctccgccgacgcgcccaccg 142

                                                                       
Query: 146 acggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcc 205
           |||| |||||||| |||||||| ||||||||||| |||||||||| ||||||||||||||
Sbjct: 143 acggcgagcaccgcatgggcaccaccatcgtcggggtctgctacgccggcggcgtcgtcc 202

                                                                       
Query: 206 tcgccgccgactccnggaccagcaccggaatgtatgtggcgaaccgtgcttcggacaaga 265
           |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 203 tcgccgccgactccaggaccagcaccggaatgtatgtggcaaaccgtgcttcggacaaga 262

                                                                       
Query: 266 ttagtcaactgactgataatgtctacgtctgccgctctggatctgctgctgacacacaaa 325
           ||||||| || |||||||||||||| |||||||| ||||||||||||||||| |||||| 
Sbjct: 263 ttagtcagctcactgataatgtctatgtctgccgttctggatctgctgctgatacacaag 322

                                                                       
Query: 326 ttatttcggattatgtacgttattttctccaccagcacacaatccagcttgggcaaccag 385
           ||||||| |||||||| || |||||||||||||| |||||||| ||||||||||||||||
Sbjct: 323 ttatttcagattatgtgcgctattttctccaccaacacacaattcagcttgggcaaccag 382

                                                                       
Query: 386 ctaccgtgaaagttgcatcccacttagttaggttattggcctatcaaaacaagagcatgt 445
           ||||||||||||| |||||| |||| ||||||||  |||||||||| |||||||||||||
Sbjct: 383 ctaccgtgaaagtcgcatccaacttggttaggttgctggcctatcagaacaagagcatgt 442

                                                                     
Query: 446 tgcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaatttactc 503
           | ||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 443 tacaagctggaatgatagttggtggatgggataagtatgagggaggccaaatttactc 500



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 36 cgctccacatctcgctcgctcgctcaccgc 65
          ||||||| ||||||||||||||||| ||||
Sbjct: 29 cgctccaaatctcgctcgctcgctcgccgc 58

---

>dbj|AK104152.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-C07, full
           insert sequence
          Length = 999

 Score =  478 bits (241), Expect = e-132
 Identities = 336/368 (91%)
 Strand = Plus / Plus

                                                                       
Query: 132 cgacgcgcccaccgacggggagcaccggatgggcacaaccatcgtcggcgtctgctacga 191
           |||||| ||||||  |||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 154 cgacgcccccacctccggggagcaccggatggggaccaccatcgtcggcgtctgctacga 213

                                                                       
Query: 192 cggcggcgtcgtcctcgccgccgactccnggaccagcaccggaatgtatgtggcgaaccg 251
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 214 cggcggcgtcgtcctcgccgccgactcccggaccagcaccggaatgtatgtggcgaaccg 273

                                                                       
Query: 252 tgcttcggacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgc 311
           ||| || ||||| |||| |||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 274 tgcatctgacaaaattactcaactgactgacaatgtgtacgtctgccgctctggatctgc 333

                                                                       
Query: 312 tgctgacacacaaattatttcggattatgtacgttattttctccaccagcacacaatcca 371
           ||| ||||||||| | |||||||| |||||||| |||||||||||||| |||||||| ||
Sbjct: 334 tgccgacacacaagtcatttcggaatatgtacgctattttctccaccaacacacaattca 393

                                                                       
Query: 372 gcttgggcaaccagctaccgtgaaagttgcatcccacttagttaggttattggcctatca 431
           |||||||||||||||||| |||||||||||| || ||||| ||||||| ||||| |||||
Sbjct: 394 gcttgggcaaccagctactgtgaaagttgcagccaacttaattaggttgttggcttatca 453

                                                                       
Query: 432 aaacaagagcatgttgcaagctggaatgatagttggtggatgggacaaatacgagggagg 491
            ||||||| ||||||||||||||| ||||| |||||||||||||| ||||| ||||| ||
Sbjct: 454 gaacaagaacatgttgcaagctggcatgattgttggtggatgggataaatatgagggtgg 513

                   
Query: 492 ccaaattt 499
           ||||||||
Sbjct: 514 ccaaattt 521

---

>ref|XM_507536.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1079_F11.26
           mRNA
          Length = 1070

 Score =  448 bits (226), Expect = e-123
 Identities = 321/353 (90%)
 Strand = Plus / Plus

                                                                       
Query: 147 cggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcct 206
           |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 208 cggggagcaccggatggggaccaccatcgtcggcgtctgctacgacggcggcgtcgtcct 267

                                                                       
Query: 207 cgccgccgactccnggaccagcaccggaatgtatgtggcgaaccgtgcttcggacaagat 266
           ||||||||| ||| | ||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 268 cgccgccgattccagaaccagcaccggaatgtatgtggcaaaccgtgcgtcggacaagat 327

                                                                       
Query: 267 tagtcaactgactgataatgtctacgtctgccgctctggatctgctgctgacacacaaat 326
           || ||| || ||||| ||||| ||| ||||||||||||||||||||||||| |||||| |
Sbjct: 328 tactcagctaactgacaatgtgtacatctgccgctctggatctgctgctgatacacaagt 387

                                                                       
Query: 327 tatttcggattatgtacgttattttctccaccagcacacaatccagcttgggcaaccagc 386
            ||||| ||||||||||| |||||||||||||| |||||||| ||||||||||| |||||
Sbjct: 388 aatttccgattatgtacgctattttctccaccaacacacaattcagcttgggcagccagc 447

                                                                       
Query: 387 taccgtgaaagttgcatcccacttagttaggttattggcctatcaaaacaagagcatgtt 446
           |||||||||||||||| || ||||| ||||||| ||||| ||||| ||||||| ||||||
Sbjct: 448 taccgtgaaagttgcagccaacttaattaggttgttggcttatcagaacaagaacatgtt 507

                                                                
Query: 447 gcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaattt 499
           ||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||
Sbjct: 508 gcaagctggcatgattgttggtggatgggataaatatgagggaggccaaattt 560

---

>ref|XM_468000.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1040

 Score =  448 bits (226), Expect = e-123
 Identities = 321/353 (90%)
 Strand = Plus / Plus

                                                                       
Query: 147 cggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcct 206
           |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 172 cggggagcaccggatggggaccaccatcgtcggcgtctgctacgacggcggcgtcgtcct 231

                                                                       
Query: 207 cgccgccgactccnggaccagcaccggaatgtatgtggcgaaccgtgcttcggacaagat 266
           ||||||||| ||| | ||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 232 cgccgccgattccagaaccagcaccggaatgtatgtggcaaaccgtgcgtcggacaagat 291

                                                                       
Query: 267 tagtcaactgactgataatgtctacgtctgccgctctggatctgctgctgacacacaaat 326
           || ||| || ||||| ||||| ||| ||||||||||||||||||||||||| |||||| |
Sbjct: 292 tactcagctaactgacaatgtgtacatctgccgctctggatctgctgctgatacacaagt 351

                                                                       
Query: 327 tatttcggattatgtacgttattttctccaccagcacacaatccagcttgggcaaccagc 386
            ||||| ||||||||||| |||||||||||||| |||||||| ||||||||||| |||||
Sbjct: 352 aatttccgattatgtacgctattttctccaccaacacacaattcagcttgggcagccagc 411

                                                                       
Query: 387 taccgtgaaagttgcatcccacttagttaggttattggcctatcaaaacaagagcatgtt 446
           |||||||||||||||| || ||||| ||||||| ||||| ||||| ||||||| ||||||
Sbjct: 412 taccgtgaaagttgcagccaacttaattaggttgttggcttatcagaacaagaacatgtt 471

                                                                
Query: 447 gcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaattt 499
           ||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||
Sbjct: 472 gcaagctggcatgattgttggtggatgggataaatatgagggaggccaaattt 524

---

>ref|XM_506995.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1079_F11.26
           mRNA
          Length = 1085

 Score =  448 bits (226), Expect = e-123
 Identities = 321/353 (90%)
 Strand = Plus / Plus

                                                                       
Query: 147 cggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcct 206
           |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 160 cggggagcaccggatggggaccaccatcgtcggcgtctgctacgacggcggcgtcgtcct 219

                                                                       
Query: 207 cgccgccgactccnggaccagcaccggaatgtatgtggcgaaccgtgcttcggacaagat 266
           ||||||||| ||| | ||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 220 cgccgccgattccagaaccagcaccggaatgtatgtggcaaaccgtgcgtcggacaagat 279

                                                                       
Query: 267 tagtcaactgactgataatgtctacgtctgccgctctggatctgctgctgacacacaaat 326
           || ||| || ||||| ||||| ||| ||||||||||||||||||||||||| |||||| |
Sbjct: 280 tactcagctaactgacaatgtgtacatctgccgctctggatctgctgctgatacacaagt 339

                                                                       
Query: 327 tatttcggattatgtacgttattttctccaccagcacacaatccagcttgggcaaccagc 386
            ||||| ||||||||||| |||||||||||||| |||||||| ||||||||||| |||||
Sbjct: 340 aatttccgattatgtacgctattttctccaccaacacacaattcagcttgggcagccagc 399

                                                                       
Query: 387 taccgtgaaagttgcatcccacttagttaggttattggcctatcaaaacaagagcatgtt 446
           |||||||||||||||| || ||||| ||||||| ||||| ||||| ||||||| ||||||
Sbjct: 400 taccgtgaaagttgcagccaacttaattaggttgttggcttatcagaacaagaacatgtt 459

                                                                
Query: 447 gcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaattt 499
           ||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||
Sbjct: 460 gcaagctggcatgattgttggtggatgggataaatatgagggaggccaaattt 512

---

>dbj|AK104505.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F11, full
           insert sequence
          Length = 1040

 Score =  448 bits (226), Expect = e-123
 Identities = 321/353 (90%)
 Strand = Plus / Plus

                                                                       
Query: 147 cggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcct 206
           |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 172 cggggagcaccggatggggaccaccatcgtcggcgtctgctacgacggcggcgtcgtcct 231

                                                                       
Query: 207 cgccgccgactccnggaccagcaccggaatgtatgtggcgaaccgtgcttcggacaagat 266
           ||||||||| ||| | ||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 232 cgccgccgattccagaaccagcaccggaatgtatgtggcaaaccgtgcgtcggacaagat 291

                                                                       
Query: 267 tagtcaactgactgataatgtctacgtctgccgctctggatctgctgctgacacacaaat 326
           || ||| || ||||| ||||| ||| ||||||||||||||||||||||||| |||||| |
Sbjct: 292 tactcagctaactgacaatgtgtacatctgccgctctggatctgctgctgatacacaagt 351

                                                                       
Query: 327 tatttcggattatgtacgttattttctccaccagcacacaatccagcttgggcaaccagc 386
            ||||| ||||||||||| |||||||||||||| |||||||| ||||||||||| |||||
Sbjct: 352 aatttccgattatgtacgctattttctccaccaacacacaattcagcttgggcagccagc 411

                                                                       
Query: 387 taccgtgaaagttgcatcccacttagttaggttattggcctatcaaaacaagagcatgtt 446
           |||||||||||||||| || ||||| ||||||| ||||| ||||| ||||||| ||||||
Sbjct: 412 taccgtgaaagttgcagccaacttaattaggttgttggcttatcagaacaagaacatgtt 471

                                                                
Query: 447 gcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaattt 499
           ||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||
Sbjct: 472 gcaagctggcatgattgttggtggatgggataaatatgagggaggccaaattt 524

---

>dbj|AK103425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128K18, full
           insert sequence
          Length = 1084

 Score =  448 bits (226), Expect = e-123
 Identities = 321/353 (90%)
 Strand = Plus / Plus

                                                                       
Query: 147 cggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcct 206
           |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 160 cggggagcaccggatggggaccaccatcgtcggcgtctgctacgacggcggcgtcgtcct 219

                                                                       
Query: 207 cgccgccgactccnggaccagcaccggaatgtatgtggcgaaccgtgcttcggacaagat 266
           ||||||||| ||| | ||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 220 cgccgccgattccagaaccagcaccggaatgtatgtggcaaaccgtgcgtcggacaagat 279

                                                                       
Query: 267 tagtcaactgactgataatgtctacgtctgccgctctggatctgctgctgacacacaaat 326
           || ||| || ||||| ||||| ||| ||||||||||||||||||||||||| |||||| |
Sbjct: 280 tactcagctaactgacaatgtgtacatctgccgctctggatctgctgctgatacacaagt 339

                                                                       
Query: 327 tatttcggattatgtacgttattttctccaccagcacacaatccagcttgggcaaccagc 386
            ||||| ||||||||||| |||||||||||||| |||||||| ||||||||||| |||||
Sbjct: 340 aatttccgattatgtacgctattttctccaccaacacacaattcagcttgggcagccagc 399

                                                                       
Query: 387 taccgtgaaagttgcatcccacttagttaggttattggcctatcaaaacaagagcatgtt 446
           |||||||||||||||| || ||||| ||||||| ||||| ||||| ||||||| ||||||
Sbjct: 400 taccgtgaaagttgcagccaacttaattaggttgttggcttatcagaacaagaacatgtt 459

                                                                
Query: 447 gcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaattt 499
           ||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||
Sbjct: 460 gcaagctggcatgattgttggtggatgggataaatatgagggaggccaaattt 512

---

>dbj|AK059837.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C07, full
           insert sequence
          Length = 1070

 Score =  448 bits (226), Expect = e-123
 Identities = 321/353 (90%)
 Strand = Plus / Plus

                                                                       
Query: 147 cggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcct 206
           |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 208 cggggagcaccggatggggaccaccatcgtcggcgtctgctacgacggcggcgtcgtcct 267

                                                                       
Query: 207 cgccgccgactccnggaccagcaccggaatgtatgtggcgaaccgtgcttcggacaagat 266
           ||||||||| ||| | ||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 268 cgccgccgattccagaaccagcaccggaatgtatgtggcaaaccgtgcgtcggacaagat 327

                                                                       
Query: 267 tagtcaactgactgataatgtctacgtctgccgctctggatctgctgctgacacacaaat 326
           || ||| || ||||| ||||| ||| ||||||||||||||||||||||||| |||||| |
Sbjct: 328 tactcagctaactgacaatgtgtacatctgccgctctggatctgctgctgatacacaagt 387

                                                                       
Query: 327 tatttcggattatgtacgttattttctccaccagcacacaatccagcttgggcaaccagc 386
            ||||| ||||||||||| |||||||||||||| |||||||| ||||||||||| |||||
Sbjct: 388 aatttccgattatgtacgctattttctccaccaacacacaattcagcttgggcagccagc 447

                                                                       
Query: 387 taccgtgaaagttgcatcccacttagttaggttattggcctatcaaaacaagagcatgtt 446
           |||||||||||||||| || ||||| ||||||| ||||| ||||| ||||||| ||||||
Sbjct: 448 taccgtgaaagttgcagccaacttaattaggttgttggcttatcagaacaagaacatgtt 507

                                                                
Query: 447 gcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaattt 499
           ||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||
Sbjct: 508 gcaagctggcatgattgttggtggatgggataaatatgagggaggccaaattt 560

---

>dbj|AB026563.1| Oryza sativa (japonica cultivar-group) OsPBA1 mRNA for beta 1
           subunit of 20S proteasome, complete cds
          Length = 1068

 Score =  448 bits (226), Expect = e-123
 Identities = 321/353 (90%)
 Strand = Plus / Plus

                                                                       
Query: 147 cggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcct 206
           |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 191 cggggagcaccggatggggaccaccatcgtcggcgtctgctacgacggcggcgtcgtcct 250

                                                                       
Query: 207 cgccgccgactccnggaccagcaccggaatgtatgtggcgaaccgtgcttcggacaagat 266
           ||||||||| ||| | ||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 251 cgccgccgattccagaaccagcaccggaatgtatgtggcaaaccgtgcgtcggacaagat 310

                                                                       
Query: 267 tagtcaactgactgataatgtctacgtctgccgctctggatctgctgctgacacacaaat 326
           || ||| || ||||| ||||| ||| ||||||||||||||||||||||||| |||||| |
Sbjct: 311 tactcagctaactgacaatgtgtacatctgccgctctggatctgctgctgatacacaagt 370

                                                                       
Query: 327 tatttcggattatgtacgttattttctccaccagcacacaatccagcttgggcaaccagc 386
            ||||| ||||||||||| |||||||||||||| |||||||| ||||||||||| |||||
Sbjct: 371 aatttccgattatgtacgctattttctccaccaacacacaattcagcttgggcagccagc 430

                                                                       
Query: 387 taccgtgaaagttgcatcccacttagttaggttattggcctatcaaaacaagagcatgtt 446
           |||||||||||||||| || ||||| ||||||| ||||| ||||| ||||||| ||||||
Sbjct: 431 taccgtgaaagttgcagccaacttaattaggttgttggcttatcagaacaagaacatgtt 490

                                                                
Query: 447 gcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaattt 499
           ||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||
Sbjct: 491 gcaagctggcatgattgttggtggatgggataaatatgagggaggccaaattt 543

---

>gb|AY103685.1| Zea mays PCO069906 mRNA sequence
          Length = 1201

 Score =  385 bits (194), Expect = e-103
 Identities = 313/353 (88%)
 Strand = Plus / Plus

                                                                       
Query: 147 cggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcct 206
           |||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 241 cggggagcaccggatggggactaccatcgtcggggtctgctacgagggcggcgtcgtcct 300

                                                                       
Query: 207 cgccgccgactccnggaccagcaccggaatgtatgtggcgaaccgtgcttcggacaagat 266
            | |||||| ||| |||||||||| ||||||||||| || ||||||||||| ||||||||
Sbjct: 301 gggcgccgattccaggaccagcactggaatgtatgtagccaaccgtgcttcagacaagat 360

                                                                       
Query: 267 tagtcaactgactgataatgtctacgtctgccgctctggatctgctgctgacacacaaat 326
           || ||||||||| || ||||| || ||||| |||||||||||||||||||| |||||| |
Sbjct: 361 tactcaactgacagacaatgtgtatgtctgtcgctctggatctgctgctgatacacaagt 420

                                                                       
Query: 327 tatttcggattatgtacgttattttctccaccagcacacaatccagcttgggcaaccagc 386
            ||||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 421 catttcggattatgtacgctatttcctccaccaacacacaatccagcttggacaaccagc 480

                                                                       
Query: 387 taccgtgaaagttgcatcccacttagttaggttattggcctatcaaaacaagagcatgtt 446
           |||||| ||||||||| || ||||  |||||||  | || ||||| ||||||| ||||||
Sbjct: 481 taccgttaaagttgcagccaacttgattaggttgctagcttatcagaacaagaacatgtt 540

                                                                
Query: 447 gcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaattt 499
           ||||||||| ||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 541 gcaagctggcatgattgttggaggatgggacaagtacgagggaggccaaattt 593

---

>gb|DQ023303.1| Aegilops tauschii beta1 proteasome-1D gene, complete cds
          Length = 4452

 Score =  220 bits (111), Expect = 3e-54
 Identities = 134/142 (94%)
 Strand = Plus / Plus

                                                                       
Query: 92  ccgccatggacgccgcctcgctcatgggcccctcctctgccgacgcgcccaccgacgggg 151
           ||||||||||||||||||||||||||||||||||||| ||||||||  || |||||||||
Sbjct: 792 ccgccatggacgccgcctcgctcatgggcccctcctccgccgacgccgcccccgacgggg 851

                                                                       
Query: 152 agcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcctcgccg 211
           |||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 852 agcaccggatgggcaccaccatcgtgggcgtctgctacgacggcggcgtcgtgctcgccg 911

                                 
Query: 212 ccgactccnggaccagcaccgg 233
           |||||||| |||||||||||||
Sbjct: 912 ccgactccaggaccagcaccgg 933



 Score =  141 bits (71), Expect = 3e-30
 Identities = 77/79 (97%)
 Strand = Plus / Plus

                                                                        
Query: 232  ggaatgtatgtggcgaaccgtgcttcggacaagattagtcaactgactgataatgtctac 291
            |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1471 ggaatgtatgtggcaaaccgtgcttcggacaagattagtcagctgactgataatgtctac 1530

                               
Query: 292  gtctgccgctctggatctg 310
            |||||||||||||||||||
Sbjct: 1531 gtctgccgctctggatctg 1549



 Score =  133 bits (67), Expect = 6e-28
 Identities = 67/67 (100%)
 Strand = Plus / Plus

                                                                        
Query: 437  agagcatgttgcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaa 496
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2404 agagcatgttgcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaa 2463

                   
Query: 497  tttactc 503
            |||||||
Sbjct: 2464 tttactc 2470



 Score =  129 bits (65), Expect = 1e-26
 Identities = 71/73 (97%)
 Strand = Plus / Plus

                                                                        
Query: 366  aatccagcttgggcaaccagctaccgtgaaagttgcatcccacttagttaggttattggc 425
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2229 aatccagcttgggcaaccagctaccgtgaaagttgcatccaacttagttaggttattggc 2288

                         
Query: 426  ctatcaaaacaag 438
            |||||| ||||||
Sbjct: 2289 ctatcagaacaag 2301



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 54/56 (96%)
 Strand = Plus / Plus

                                                                    
Query: 310  gctgctgacacacaaattatttcggattatgtacgttattttctccaccagcacac 365
            ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 2012 gctgctgacacacaagttatttcggattatgttcgttattttctccaccagcacac 2067



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 36  cgctccacatctcgctcgctcgc 58
           |||||||||||||||||||||||
Sbjct: 738 cgctccacatctcgctcgctcgc 760

---

>gb|DQ023304.1| Aegilops tauschii beta1 proteasome-7D gene, complete cds
          Length = 6037

 Score =  184 bits (93), Expect = 2e-43
 Identities = 135/148 (91%), Gaps = 6/148 (4%)
 Strand = Plus / Plus

                                                                        
Query: 92   ccgccatggacgccgcctc---gctcatgggc---ccctcctctgccgacgcgcccaccg 145
            |||||||||||||||||||   ||||||||||   |||||||| ||||||||||||||||
Sbjct: 1326 ccgccatggacgccgcctcctcgctcatgggcggcccctcctccgccgacgcgcccaccg 1385

                                                                        
Query: 146  acggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcc 205
            |||| |||||||| |||||||| ||||||||||| |||||||||| ||||||||||||||
Sbjct: 1386 acggcgagcaccgcatgggcaccaccatcgtcggggtctgctacgccggcggcgtcgtcc 1445

                                        
Query: 206  tcgccgccgactccnggaccagcaccgg 233
            |||||||||||||| |||||||||||||
Sbjct: 1446 tcgccgccgactccaggaccagcaccgg 1473



 Score =  117 bits (59), Expect = 4e-23
 Identities = 74/79 (93%)
 Strand = Plus / Plus

                                                                        
Query: 232  ggaatgtatgtggcgaaccgtgcttcggacaagattagtcaactgactgataatgtctac 291
            |||||||||||||| |||||||||||||||||||||||||| || |||||||||||||| 
Sbjct: 2762 ggaatgtatgtggcaaaccgtgcttcggacaagattagtcagctcactgataatgtctat 2821

                               
Query: 292  gtctgccgctctggatctg 310
            |||||||| ||||||||||
Sbjct: 2822 gtctgccgttctggatctg 2840



 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Plus

                                                                        
Query: 437  agagcatgttgcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaa 496
            |||||||||| ||||||||||||||||||||||||||||| || || |||||||||||||
Sbjct: 3611 agagcatgttacaagctggaatgatagttggtggatgggataagtatgagggaggccaaa 3670

                   
Query: 497  tttactc 503
            |||||||
Sbjct: 3671 tttactc 3677



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                        
Query: 370  cagcttgggcaaccagctaccgtgaaagttgcatcccacttagttaggttattggcctat 429
            ||||||||||||||||||||||||||||| |||||| |||| ||||||||  ||||||||
Sbjct: 3462 cagcttgggcaaccagctaccgtgaaagtcgcatccaacttggttaggttgctggcctat 3521

                     
Query: 430  caaaacaag 438
            || ||||||
Sbjct: 3522 cagaacaag 3530



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                    
Query: 310  gctgctgacacacaaattatttcggattatgtacgttattttctccaccagcacac 365
            |||||||| |||||| ||||||| |||||||| || |||||||||||||| |||||
Sbjct: 3241 gctgctgatacacaagttatttcagattatgtgcgctattttctccaccaacacac 3296



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 36   cgctccacatctcgctcgctcgctcaccgc 65
            ||||||| ||||||||||||||||| ||||
Sbjct: 1272 cgctccaaatctcgctcgctcgctcgccgc 1301

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  157 bits (79), Expect = 4e-35
 Identities = 96/102 (94%)
 Strand = Plus / Minus

                                                                           
Query: 132     cgacgcgcccaccgacggggagcaccggatgggcacaaccatcgtcggcgtctgctacga 191
               |||||| ||||||  |||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 2093484 cgacgcccccacctccggggagcaccggatggggaccaccatcgtcggcgtctgctacga 2093425

                                                         
Query: 192     cggcggcgtcgtcctcgccgccgactccnggaccagcaccgg 233
               |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2093424 cggcggcgtcgtcctcgccgccgactcccggaccagcaccgg 2093383



 Score =  109 bits (55), Expect = 9e-21
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                           
Query: 232     ggaatgtatgtggcgaaccgtgcttcggacaagattagtcaactgactgataatgtctac 291
               ||||||||||||||||||||||| || ||||| |||| |||||||||||| ||||| |||
Sbjct: 2092756 ggaatgtatgtggcgaaccgtgcatctgacaaaattactcaactgactgacaatgtgtac 2092697

                                  
Query: 292     gtctgccgctctggatctg 310
               |||||||||||||||||||
Sbjct: 2092696 gtctgccgctctggatctg 2092678



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                           
Query: 370     cagcttgggcaaccagctaccgtgaaagttgcatcccacttagttaggttattggcctat 429
               |||||||||||||||||||| |||||||||||| || ||||| ||||||| ||||| |||
Sbjct: 2092104 cagcttgggcaaccagctactgtgaaagttgcagccaacttaattaggttgttggcttat 2092045

                        
Query: 430     caaaacaag 438
               || ||||||
Sbjct: 2092044 cagaacaag 2092036



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                          
Query: 441     catgttgcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaattt 499
               ||||||||||||||| ||||| |||||||||||||| ||||| ||||| ||||||||||
Sbjct: 2091901 catgttgcaagctggcatgattgttggtggatgggataaatatgagggtggccaaattt 2091843



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                       
Query: 310     gctgctgacacacaaattatttcggattatgtacgttattttctccaccagcacac 365
               ||||| ||||||||| | |||||||| |||||||| |||||||||||||| |||||
Sbjct: 2092346 gctgccgacacacaagtcatttcggaatatgtacgctattttctccaccaacacac 2092291

---

>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0041F13
          Length = 163230

 Score =  157 bits (79), Expect = 4e-35
 Identities = 96/102 (94%)
 Strand = Plus / Minus

                                                                          
Query: 132    cgacgcgcccaccgacggggagcaccggatgggcacaaccatcgtcggcgtctgctacga 191
              |||||| ||||||  |||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 114346 cgacgcccccacctccggggagcaccggatggggaccaccatcgtcggcgtctgctacga 114287

                                                        
Query: 192    cggcggcgtcgtcctcgccgccgactccnggaccagcaccgg 233
              |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 114286 cggcggcgtcgtcctcgccgccgactcccggaccagcaccgg 114245



 Score =  109 bits (55), Expect = 9e-21
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                          
Query: 232    ggaatgtatgtggcgaaccgtgcttcggacaagattagtcaactgactgataatgtctac 291
              ||||||||||||||||||||||| || ||||| |||| |||||||||||| ||||| |||
Sbjct: 113618 ggaatgtatgtggcgaaccgtgcatctgacaaaattactcaactgactgacaatgtgtac 113559

                                 
Query: 292    gtctgccgctctggatctg 310
              |||||||||||||||||||
Sbjct: 113558 gtctgccgctctggatctg 113540



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                          
Query: 370    cagcttgggcaaccagctaccgtgaaagttgcatcccacttagttaggttattggcctat 429
              |||||||||||||||||||| |||||||||||| || ||||| ||||||| ||||| |||
Sbjct: 112966 cagcttgggcaaccagctactgtgaaagttgcagccaacttaattaggttgttggcttat 112907

                       
Query: 430    caaaacaag 438
              || ||||||
Sbjct: 112906 cagaacaag 112898



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                         
Query: 441    catgttgcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaattt 499
              ||||||||||||||| ||||| |||||||||||||| ||||| ||||| ||||||||||
Sbjct: 112763 catgttgcaagctggcatgattgttggtggatgggataaatatgagggtggccaaattt 112705



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                      
Query: 310    gctgctgacacacaaattatttcggattatgtacgttattttctccaccagcacac 365
              ||||| ||||||||| | |||||||| |||||||| |||||||||||||| |||||
Sbjct: 113208 gctgccgacacacaagtcatttcggaatatgtacgctattttctccaccaacacac 113153

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  135 bits (68), Expect = 2e-28
 Identities = 82/87 (94%)
 Strand = Plus / Minus

                                                                            
Query: 147      cggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcct 206
                |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 32486884 cggggagcaccggatggggaccaccatcgtcggcgtctgctacgacggcggcgtcgtcct 32486825

                                           
Query: 207      cgccgccgactccnggaccagcaccgg 233
                ||||||||| ||| | |||||||||||
Sbjct: 32486824 cgccgccgattccagaaccagcaccgg 32486798



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 71/79 (89%)
 Strand = Plus / Minus

                                                                            
Query: 232      ggaatgtatgtggcgaaccgtgcttcggacaagattagtcaactgactgataatgtctac 291
                |||||||||||||| |||||||| ||||||||||||| ||| || ||||| ||||| |||
Sbjct: 32486123 ggaatgtatgtggcaaaccgtgcgtcggacaagattactcagctaactgacaatgtgtac 32486064

                                   
Query: 292      gtctgccgctctggatctg 310
                 ||||||||||||||||||
Sbjct: 32486063 atctgccgctctggatctg 32486045



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                           
Query: 441      catgttgcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaattt 499
                ||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||
Sbjct: 32485289 catgttgcaagctggcatgattgttggtggatgggataaatatgagggaggccaaattt 32485231



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                            
Query: 370      cagcttgggcaaccagctaccgtgaaagttgcatcccacttagttaggttattggcctat 429
                ||||||||||| ||||||||||||||||||||| || ||||| ||||||| ||||| |||
Sbjct: 32485544 cagcttgggcagccagctaccgtgaaagttgcagccaacttaattaggttgttggcttat 32485485

                         
Query: 430      caaaacaag 438
                || ||||||
Sbjct: 32485484 cagaacaag 32485476



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                        
Query: 310      gctgctgacacacaaattatttcggattatgtacgttattttctccaccagcacac 365
                |||||||| |||||| | ||||| ||||||||||| |||||||||||||| |||||
Sbjct: 32485729 gctgctgatacacaagtaatttccgattatgtacgctattttctccaccaacacac 32485674



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 192     cggcggcgtcgtcctcgccg 211
               ||||||||||||||||||||
Sbjct: 9105826 cggcggcgtcgtcctcgccg 9105807

---

>dbj|AP004080.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1079_F11
          Length = 122402

 Score =  135 bits (68), Expect = 2e-28
 Identities = 82/87 (94%)
 Strand = Plus / Minus

                                                                         
Query: 147   cggggagcaccggatgggcacaaccatcgtcggcgtctgctacgacggcggcgtcgtcct 206
             |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 90277 cggggagcaccggatggggaccaccatcgtcggcgtctgctacgacggcggcgtcgtcct 90218

                                        
Query: 207   cgccgccgactccnggaccagcaccgg 233
             ||||||||| ||| | |||||||||||
Sbjct: 90217 cgccgccgattccagaaccagcaccgg 90191



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 71/79 (89%)
 Strand = Plus / Minus

                                                                         
Query: 232   ggaatgtatgtggcgaaccgtgcttcggacaagattagtcaactgactgataatgtctac 291
             |||||||||||||| |||||||| ||||||||||||| ||| || ||||| ||||| |||
Sbjct: 89516 ggaatgtatgtggcaaaccgtgcgtcggacaagattactcagctaactgacaatgtgtac 89457

                                
Query: 292   gtctgccgctctggatctg 310
              ||||||||||||||||||
Sbjct: 89456 atctgccgctctggatctg 89438



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                        
Query: 441   catgttgcaagctggaatgatagttggtggatgggacaaatacgagggaggccaaattt 499
             ||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||
Sbjct: 88682 catgttgcaagctggcatgattgttggtggatgggataaatatgagggaggccaaattt 88624



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                         
Query: 370   cagcttgggcaaccagctaccgtgaaagttgcatcccacttagttaggttattggcctat 429
             ||||||||||| ||||||||||||||||||||| || ||||| ||||||| ||||| |||
Sbjct: 88937 cagcttgggcagccagctaccgtgaaagttgcagccaacttaattaggttgttggcttat 88878

                      
Query: 430   caaaacaag 438
             || ||||||
Sbjct: 88877 cagaacaag 88869



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                     
Query: 310   gctgctgacacacaaattatttcggattatgtacgttattttctccaccagcacac 365
             |||||||| |||||| | ||||| ||||||||||| |||||||||||||| |||||
Sbjct: 89122 gctgctgatacacaagtaatttccgattatgtacgctattttctccaccaacacac 89067

---

>emb|Y09505.1|NTY09505 N.tabacum mRNA for delta proteasome subunit
          Length = 978

 Score =  121 bits (61), Expect = 2e-24
 Identities = 153/184 (83%)
 Strand = Plus / Plus

                                                                       
Query: 191 acggcggcgtcgtcctcgccgccgactccnggaccagcaccggaatgtatgtggcgaacc 250
           |||||||||| || |||| |||||| ||  | ||||||||||||||||||||||||||  
Sbjct: 109 acggcggcgttgtactcggcgccgattctcgcaccagcaccggaatgtatgtggcgaata 168

                                                                       
Query: 251 gtgcttcggacaagattagtcaactgactgataatgtctacgtctgccgctctggatctg 310
           | |||||||| ||||||| ||| |||||||||||||||||||| |||||||| ||||| |
Sbjct: 169 gggcttcggataagattactcagctgactgataatgtctacgtttgccgctccggatcag 228

                                                                       
Query: 311 ctgctgacacacaaattatttcggattatgtacgttattttctccaccagcacacaatcc 370
           | || ||  | |||||| |||| || ||||| ||||| || || ||||| ||||| || |
Sbjct: 229 cagcagattcccaaattgtttcagactatgttcgttacttcctacaccaacacacgatac 288

               
Query: 371 agct 374
           ||||
Sbjct: 289 agct 292

---

>ref|NM_119279.3| Arabidopsis thaliana PBA1; endopeptidase/ peptidase/ threonine
           endopeptidase AT4G31300 (PBA1) transcript variant
           AT4G31300.1 mRNA, complete cds
          Length = 1045

 Score =  111 bits (56), Expect = 2e-21
 Identities = 103/119 (86%)
 Strand = Plus / Plus

                                                                       
Query: 199 gtcgtcctcgccgccgactccnggaccagcaccggaatgtatgtggcgaaccgtgcttcg 258
           ||||||||||  ||||||||  | ||||||||||| ||||| || ||||| || ||||| 
Sbjct: 234 gtcgtcctcggagccgactcacgtaccagcaccggtatgtacgtagcgaatcgagcttct 293

                                                                      
Query: 259 gacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgctgctga 317
           || |||||||  |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 294 gataagattacacaactgacagataatgtctacgtctgccgctctggatcggctgctga 352

---

>ref|NM_001036682.1| Arabidopsis thaliana PBA1; endopeptidase/ peptidase/ threonine
           endopeptidase AT4G31300 (PBA1) transcript variant
           AT4G31300.2 mRNA, complete cds
          Length = 1087

 Score =  111 bits (56), Expect = 2e-21
 Identities = 103/119 (86%)
 Strand = Plus / Plus

                                                                       
Query: 199 gtcgtcctcgccgccgactccnggaccagcaccggaatgtatgtggcgaaccgtgcttcg 258
           ||||||||||  ||||||||  | ||||||||||| ||||| || ||||| || ||||| 
Sbjct: 234 gtcgtcctcggagccgactcacgtaccagcaccggtatgtacgtagcgaatcgagcttct 293

                                                                      
Query: 259 gacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgctgctga 317
           || |||||||  |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 294 gataagattacacaactgacagataatgtctacgtctgccgctctggatcggctgctga 352

---

>emb|Y13694.1|ATY13694 Arabidopsis thaliana mRNA for proteasome subunit prcd
          Length = 946

 Score =  111 bits (56), Expect = 2e-21
 Identities = 103/119 (86%)
 Strand = Plus / Plus

                                                                       
Query: 199 gtcgtcctcgccgccgactccnggaccagcaccggaatgtatgtggcgaaccgtgcttcg 258
           ||||||||||  ||||||||  | ||||||||||| ||||| || ||||| || ||||| 
Sbjct: 141 gtcgtcctcggagccgactcacgtaccagcaccggtatgtacgtagcgaatcgagcttct 200

                                                                      
Query: 259 gacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgctgctga 317
           || |||||||  |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 gataagattacacaactgacagataatgtctacgtctgccgctctggatcggctgctga 259

---

>gb|AY058240.1| Arabidopsis thaliana AT4g31300/F8F16_120 mRNA, complete cds
          Length = 702

 Score =  111 bits (56), Expect = 2e-21
 Identities = 103/119 (86%)
 Strand = Plus / Plus

                                                                       
Query: 199 gtcgtcctcgccgccgactccnggaccagcaccggaatgtatgtggcgaaccgtgcttcg 258
           ||||||||||  ||||||||  | ||||||||||| ||||| || ||||| || ||||| 
Sbjct: 70  gtcgtcctcggagccgactcacgtaccagcaccggtatgtacgtagcgaatcgagcttct 129

                                                                      
Query: 259 gacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgctgctga 317
           || |||||||  |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 130 gataagattacacaactgacagataatgtctacgtctgccgctctggatcggctgctga 188

---

>gb|AY052354.1| Arabidopsis thaliana AT4g31300/F8F16_120 mRNA, complete cds
          Length = 1019

 Score =  111 bits (56), Expect = 2e-21
 Identities = 103/119 (86%)
 Strand = Plus / Plus

                                                                       
Query: 199 gtcgtcctcgccgccgactccnggaccagcaccggaatgtatgtggcgaaccgtgcttcg 258
           ||||||||||  ||||||||  | ||||||||||| ||||| || ||||| || ||||| 
Sbjct: 234 gtcgtcctcggagccgactcacgtaccagcaccggtatgtacgtagcgaatcgagcttct 293

                                                                      
Query: 259 gacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgctgctga 317
           || |||||||  |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 294 gataagattacacaactgacagataatgtctacgtctgccgctctggatcggctgctga 352

---

>emb|BX829148.1|CNS0A2OL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL75ZG07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 952

 Score =  111 bits (56), Expect = 2e-21
 Identities = 103/119 (86%)
 Strand = Plus / Plus

                                                                       
Query: 199 gtcgtcctcgccgccgactccnggaccagcaccggaatgtatgtggcgaaccgtgcttcg 258
           ||||||||||  ||||||||  | ||||||||||| ||||| || ||||| || ||||| 
Sbjct: 141 gtcgtcctcggagccgactcacgtaccagcaccggtatgtacgtagcgaatcgagcttct 200

                                                                      
Query: 259 gacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgctgctga 317
           || |||||||  |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 gataagattacacaactgacagataatgtctacgtctgccgctctggatcggctgctga 259

---

>emb|BX828596.1|CNS0A2KF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL1ZC05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 924

 Score =  111 bits (56), Expect = 2e-21
 Identities = 103/119 (86%)
 Strand = Plus / Plus

                                                                       
Query: 199 gtcgtcctcgccgccgactccnggaccagcaccggaatgtatgtggcgaaccgtgcttcg 258
           ||||||||||  ||||||||  | ||||||||||| ||||| || ||||| || ||||| 
Sbjct: 121 gtcgtcctcggagccgactcacgtaccagcaccggtatgtacgtagcgaatcgagcttct 180

                                                                      
Query: 259 gacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgctgctga 317
           || |||||||  |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 gataagattacacaactgacagataatgtctacgtctgccgctctggatcggctgctga 239

---

>emb|BX841557.1|CNS09YGA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH42ZF01 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 841

 Score =  111 bits (56), Expect = 2e-21
 Identities = 103/119 (86%)
 Strand = Plus / Plus

                                                                       
Query: 199 gtcgtcctcgccgccgactccnggaccagcaccggaatgtatgtggcgaaccgtgcttcg 258
           ||||||||||  ||||||||  | ||||||||||| ||||| || ||||| || ||||| 
Sbjct: 138 gtcgtcctcggagccgactcacgtaccagcaccggtatgtacgtagcgaatcgagcttct 197

                                                                      
Query: 259 gacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgctgctga 317
           || |||||||  |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 198 gataagattacacaactgacagataatgtctacgtctgccgctctggatcggctgctga 256

---

>emb|BX841537.1|CNS09YG8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS52ZD02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 887

 Score =  111 bits (56), Expect = 2e-21
 Identities = 103/119 (86%)
 Strand = Plus / Plus

                                                                       
Query: 199 gtcgtcctcgccgccgactccnggaccagcaccggaatgtatgtggcgaaccgtgcttcg 258
           ||||||||||  ||||||||  | ||||||||||| ||||| || ||||| || ||||| 
Sbjct: 84  gtcgtcctcggagccgactcacgtaccagcaccggtatgtacgtagcgaatcgagcttct 143

                                                                      
Query: 259 gacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgctgctga 317
           || |||||||  |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 144 gataagattacacaactgacagataatgtctacgtctgccgctctggatcggctgctga 202

---

>gb|AY086241.1| Arabidopsis thaliana clone 229 mRNA, complete sequence
          Length = 963

 Score =  111 bits (56), Expect = 2e-21
 Identities = 103/119 (86%)
 Strand = Plus / Plus

                                                                       
Query: 199 gtcgtcctcgccgccgactccnggaccagcaccggaatgtatgtggcgaaccgtgcttcg 258
           ||||||||||  ||||||||  | ||||||||||| ||||| || ||||| || ||||| 
Sbjct: 152 gtcgtcctcggagccgactcacgtaccagcaccggtatgtacgtagcgaatcgagcttct 211

                                                                      
Query: 259 gacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgctgctga 317
           || |||||||  |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 212 gataagattacacaactgacagataatgtctacgtctgccgctctggatcggctgctga 270

---

>gb|AF043529.1|AF043529 Arabidopsis thaliana 20S proteasome subunit PBA1 (PBA1) mRNA,
           complete cds
          Length = 1035

 Score =  111 bits (56), Expect = 2e-21
 Identities = 103/119 (86%)
 Strand = Plus / Plus

                                                                       
Query: 199 gtcgtcctcgccgccgactccnggaccagcaccggaatgtatgtggcgaaccgtgcttcg 258
           ||||||||||  ||||||||  | ||||||||||| ||||| || ||||| || ||||| 
Sbjct: 222 gtcgtcctcggagccgactcacgtaccagcaccggtatgtacgtagcgaatcgagcttct 281

                                                                      
Query: 259 gacaagattagtcaactgactgataatgtctacgtctgccgctctggatctgctgctga 317
           || |||||||  |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 282 gataagattacacaactgacagataatgtctacgtctgccgctctggatcggctgctga 340

---

>gb|AY518884.1| Brassica napus putative proteasome 20S beta1 subunit mRNA, partial
           cds
          Length = 526

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Plus

                                                                       
Query: 223 accagcaccggaatgtatgtggcgaaccgtgcttcggacaagattagtcaactgactgat 282
           ||||||||||| |||||||| ||||| || ||||| |||||||| | |||||| ||||| 
Sbjct: 1   accagcaccggtatgtatgtagcgaatcgagcttcagacaagatcactcaactcactgac 60

                                              
Query: 283 aatgtctacgtctgccgctctggatctgctgctga 317
           ||||||||||||||||| |||||||| ||||||||
Sbjct: 61  aatgtctacgtctgccgttctggatcggctgctga 95

---

>gb|AY518885.1| Brassica napus putative proteasome 20S beta1.1 subunit mRNA,
           partial cds
          Length = 518

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                       
Query: 223 accagcaccggaatgtatgtggcgaaccgtgcttcggacaagattagtcaactgactgat 282
           ||||||||||| |||||||| ||||| || ||||| || ||||| |  ||||| ||||| 
Sbjct: 1   accagcaccggtatgtatgtagcgaatcgagcttcagataagatcacacaactcactgac 60

                                              
Query: 283 aatgtctacgtctgccgctctggatctgctgctga 317
           ||||||||||||||||| |||||||| ||||||||
Sbjct: 61  aatgtctacgtctgccgttctggatcggctgctga 95

---

>emb|AL161578.2|ATCHRIV74 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 74
          Length = 194920

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                          
Query: 235    atgtatgtggcgaaccgtgcttcggacaagattagtcaactgactgataatgtctacgtc 294
              ||||| || ||||| || ||||| || |||||||  |||||||| |||||||||||||||
Sbjct: 145071 atgtacgtagcgaatcgagcttctgataagattacacaactgacagataatgtctacgtc 145130

                            
Query: 295    tgccgctctggatc 308
              ||||||||||||||
Sbjct: 145131 tgccgctctggatc 145144

---

>emb|AL021633.2|ATF8F16 Arabidopsis thaliana DNA chromosome 4, BAC clone F8F16 (ESSA project)
          Length = 93038

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                         
Query: 235   atgtatgtggcgaaccgtgcttcggacaagattagtcaactgactgataatgtctacgtc 294
             ||||| || ||||| || ||||| || |||||||  |||||||| |||||||||||||||
Sbjct: 28969 atgtacgtagcgaatcgagcttctgataagattacacaactgacagataatgtctacgtc 29028

                           
Query: 295   tgccgctctggatc 308
             ||||||||||||||
Sbjct: 29029 tgccgctctggatc 29042

---

>emb|AJ586793.1| Humulus lupulus microsatellite DNA, clone EMFV021
          Length = 547

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                       
Query: 238 tatgtggcgaaccgtgcttcggacaagattagtcaactgactgataatgtctacgtctgc 297
           ||||| || |||||||| ||||||||||||| ||| || ||||||||||||||||| || 
Sbjct: 438 tatgttgctaaccgtgcatcggacaagattactcagctcactgataatgtctacgtttgt 379

                      
Query: 298 cgctctggatc 308
           ||||| |||||
Sbjct: 378 cgctccggatc 368



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 329 tttcggattatgtacgttattttctccaccagcacac 365
           ||||||| ||||| ||||||||||| || ||||||||
Sbjct: 82  tttcggactatgtgcgttattttcttcatcagcacac 46

---

>emb|Z99979.1|MAZ99979 Musa acuminata mRNA for unknown ripening-related protein (clone
           pBAN EU97)
          Length = 736

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 107/132 (81%)
 Strand = Plus / Plus

                                                                       
Query: 186 ctacgacggcggcgtcgtcctcgccgccgactccnggaccagcaccggaatgtatgtggc 245
           |||||||||||| ||||||||||  ||||| ||  |||| ||||| ||||||||||| ||
Sbjct: 56  ctacgacggcggtgtcgtcctcggagccgattcgaggacgagcacaggaatgtatgtcgc 115

                                                                       
Query: 246 gaaccgtgcttcggacaagattagtcaactgactgataatgtctacgtctgccgctctgg 305
            || || || ||||| ||||| |  ||  |||| || ||||||||| | |||||||||||
Sbjct: 116 taatcgggcgtcggataagatcacacagttgacggacaatgtctacatatgccgctctgg 175

                       
Query: 306 atctgctgctga 317
           ||| || |||||
Sbjct: 176 atcggcagctga 187



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 463 gttggtggatgggacaaatacgagggaggccaaat 497
           ||||||||||||||||||||||| ||||| |||||
Sbjct: 333 gttggtggatgggacaaatacgaaggaggtcaaat 367

---

>emb|CR940307.5| M.truncatula DNA sequence from clone MTH2-21G21 on chromosome 3,
             complete sequence
          Length = 115223

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 277   actgataatgtctacgtctgccgctctggatc 308
             |||||||||||||||||||| |||||||||||
Sbjct: 61756 actgataatgtctacgtctgtcgctctggatc 61787

---

>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence
          Length = 505334

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 171    catcgtcggcgtctgctacgacggcggcgtcg 202
              |||||||||| ||||||||| |||||||||||
Sbjct: 406531 catcgtcggcttctgctacggcggcggcgtcg 406500

---

>ref|XM_662679.1| Cryptosporidium hominis TU502 proteasome B type subunit
           (Chro.20097) partial mRNA
          Length = 633

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 295 tgccgctctggatctgctgctgacacacaaattatttc 332
           ||||| ||||||||||| || ||||| |||||||||||
Sbjct: 169 tgccgttctggatctgcagcagacacccaaattatttc 206

---

>emb|AL109630.2|DMBR7A4 Drosophila melanogaster BAC clone BACR7A4
          Length = 212370

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 307    tctgctgctgacacacaaatta 328
              ||||||||||||||||||||||
Sbjct: 144104 tctgctgctgacacacaaatta 144083

---

>emb|BX571738.12| Zebrafish DNA sequence from clone CH211-64K10 in linkage group 16,
              complete sequence
          Length = 141217

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 334    gattatgtacgttattttctccacca 359
              |||||||||| |||||||||||||||
Sbjct: 123123 gattatgtacattattttctccacca 123098

---

>gb|AC104287.8| Drosophila melanogaster X BAC RP98-29P19 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 169557

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 307    tctgctgctgacacacaaatta 328
              ||||||||||||||||||||||
Sbjct: 147306 tctgctgctgacacacaaatta 147327

---

>gb|AC097726.4| Drosophila melanogaster X BAC RP98-5N14 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 146717

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 307    tctgctgctgacacacaaatta 328
              ||||||||||||||||||||||
Sbjct: 144473 tctgctgctgacacacaaatta 144452

---

>ref|XM_626319.1| Cryptosporidium parvum Iowa II Pre3p/proteasome regulatory subunit
           beta type 6, NTN hydrolase fold (cgd2_860), partial mRNA
          Length = 747

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 295 tgccgctctggatctgctgctgacacacaaattatttc 332
           ||||| ||||||||||| || ||||| |||||||||||
Sbjct: 283 tgccgttctggatctgcagcagacacccaaattatttc 320

---

>gb|AF097521.1|AF097521 Cryptosporidium parvum proteasome B type subunit (PB) gene,
           complete cds
          Length = 1281

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 295 tgccgctctggatctgctgctgacacacaaattatttc 332
           ||||| ||||||||||| || ||||| |||||||||||
Sbjct: 483 tgccgttctggatctgcagcagacacccaaattatttc 520

---

>gb|AE003419.2| Drosophila melanogaster chromosome X, section 3 of 74 of the complete
              sequence
          Length = 306598

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 307    tctgctgctgacacacaaatta 328
              ||||||||||||||||||||||
Sbjct: 120800 tctgctgctgacacacaaatta 120779

---

>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 87    gatctccgccatggacgccgcctcg 111
             ||||||||||||| |||||||||||
Sbjct: 36997 gatctccgccatgtacgccgcctcg 37021

---

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 196     ggcgtcgtcctcgccgccgac 216
               |||||||||||||||||||||
Sbjct: 2883743 ggcgtcgtcctcgccgccgac 2883723

---

>gb|AF104994.1|AF104994 Streptomyces coelicolor A3(2) periplasmic binding protein (atrA),
            permease (AtrB), ATP-binding protein (atrC),
            methyltransferase (metZ), signal peptidase, Ni-containing
            superoxide dismutase (sodN), puromycin
            N-acetyltransferase (pat), and geranyl transferase (gtr)
            genes, complete cds; and unknown genes
          Length = 8568

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 87   gatctccgccatggacgccgcctcg 111
            ||||||||||||| |||||||||||
Sbjct: 1745 gatctccgccatgtacgccgcctcg 1721

---

>ref|NM_188321.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 327

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 195 cggcgtcgtcctcgccgccg 214
           ||||||||||||||||||||
Sbjct: 188 cggcgtcgtcctcgccgccg 207

---

>ref|XM_464899.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 936

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 192 cggcggcgtcgtcctcgccg 211
           ||||||||||||||||||||
Sbjct: 102 cggcggcgtcgtcctcgccg 83

---

>gb|AC117264.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_D04,
              complete sequence
          Length = 168424

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    cggcgtcgtcctcgccgccg 214
              ||||||||||||||||||||
Sbjct: 113285 cggcgtcgtcctcgccgccg 113266

---

>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 71      agggttcgagtccgtcgatc 90
               ||||||||||||||||||||
Sbjct: 3011606 agggttcgagtccgtcgatc 3011587

---

>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 192     cggcggcgtcgtcctcgccg 211
               ||||||||||||||||||||
Sbjct: 2508260 cggcggcgtcgtcctcgccg 2508279

---

>gb|AC183432.1| Ornithorhynchus anatinus BAC clone OABb-35B8 from chromosome unknown,
              complete sequence
          Length = 142253

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    tcatgggcccctcctctgcc 132
              ||||||||||||||||||||
Sbjct: 108688 tcatgggcccctcctctgcc 108669

---

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 192    cggcggcgtcgtcctcgccg 211
              ||||||||||||||||||||
Sbjct: 688300 cggcggcgtcgtcctcgccg 688319

---

>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   cggcggcgtcgtcctcgccg 211
             ||||||||||||||||||||
Sbjct: 32726 cggcggcgtcgtcctcgccg 32745

---

>dbj|AB121977.1| Xanthobacter polyaromaticivorans dbd gene cluster (dbdA, dbdB, dbdCa,
            dbdCb, dbdCc, dbdD, dbdE), complete and partial cds
          Length = 6407

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 93   cgccatggacgccgcctcgc 112
            ||||||||||||||||||||
Sbjct: 5580 cgccatggacgccgcctcgc 5561

---

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 192     cggcggcgtcgtcctcgccg 211
               ||||||||||||||||||||
Sbjct: 1937633 cggcggcgtcgtcctcgccg 1937614

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 195      cggcgtcgtcctcgccgccg 214
                ||||||||||||||||||||
Sbjct: 15458264 cggcgtcgtcctcgccgccg 15458245

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 195     cggcgtcgtcctcgccgccg 214
               ||||||||||||||||||||
Sbjct: 5684886 cggcgtcgtcctcgccgccg 5684905

---

>gb|AF245428.1|AF245428 Buxus liukiuensis 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 930

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 190 gacggcggcgtcgtcctcgc 209
           ||||||||||||||||||||
Sbjct: 711 gacggcggcgtcgtcctcgc 730

---

>gb|AF245414.1|AF245414 Buxus microphylla subsp. sinica 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, 5.8S ribosomal
           RNA gene and internal transcribed spacer 2, complete
           sequence; and 26S ribosomal RNA gene, partial sequence
          Length = 902

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 190 gacggcggcgtcgtcctcgc 209
           ||||||||||||||||||||
Sbjct: 705 gacggcggcgtcgtcctcgc 724

---

>gb|AF245413.1|AF245413 Buxus riparia 18S ribosomal RNA gene, partial sequence; internal
           transcribed spacer 1, 5.8S ribosomal RNA gene and
           internal transcribed spacer 2, complete sequence; and
           26S ribosomal RNA gene, partial sequence
          Length = 946

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 190 gacggcggcgtcgtcctcgc 209
           ||||||||||||||||||||
Sbjct: 752 gacggcggcgtcgtcctcgc 771

---

>gb|AF245412.1|AF245412 Buxus microphylla var. japonica 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, 5.8S ribosomal
           RNA gene and internal transcribed spacer 2, complete
           sequence; and 26S ribosomal RNA gene, partial sequence
          Length = 916

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 190 gacggcggcgtcgtcctcgc 209
           ||||||||||||||||||||
Sbjct: 720 gacggcggcgtcgtcctcgc 739

---

>dbj|AP003105.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0489A05
          Length = 158815

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 195    cggcgtcgtcctcgccgccg 214
              ||||||||||||||||||||
Sbjct: 150359 cggcgtcgtcctcgccgccg 150378

---

>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0451C06
          Length = 151773

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 195  cggcgtcgtcctcgccgccg 214
            ||||||||||||||||||||
Sbjct: 9588 cggcgtcgtcctcgccgccg 9607

---

>dbj|AP005777.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBb0026F09
          Length = 124371

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 192  cggcggcgtcgtcctcgccg 211
            ||||||||||||||||||||
Sbjct: 8589 cggcggcgtcgtcctcgccg 8570

---

>dbj|AK120469.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109F03, full
           insert sequence
          Length = 810

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 195 cggcgtcgtcctcgccgccg 214
           ||||||||||||||||||||
Sbjct: 295 cggcgtcgtcctcgccgccg 314

---

>dbj|AK108155.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-G06, full
           insert sequence
          Length = 924

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 195 cggcgtcgtcctcgccgccg 214
           ||||||||||||||||||||
Sbjct: 249 cggcgtcgtcctcgccgccg 268

---

>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 192     cggcggcgtcgtcctcgccgccga 215
               ||||||||||||| ||||||||||
Sbjct: 2441084 cggcggcgtcgtcatcgccgccga 2441107

---

>emb|AL831776.3| Mouse DNA sequence from clone RP23-307M2 on chromosome 4, complete
              sequence
          Length = 204136

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 344    gttattttctccaccagcacacaa 367
              ||||||||||||||||||| ||||
Sbjct: 182057 gttattttctccaccagcagacaa 182034


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,322,496
Number of Sequences: 3902068
Number of extensions: 3322496
Number of successful extensions: 84396
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83690
Number of HSP's gapped (non-prelim): 701
length of query: 505
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 483
effective length of database: 17,147,199,772
effective search space: 8282097489876
effective search space used: 8282097489876
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---