Clone Name | bart09a02 |
---|---|
Clone Library Name | barley_pub |
>PSB7_RAT (Q9JHW0) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 175 bits (444), Expect = 5e-44 Identities = 92/142 (64%), Positives = 103/142 (72%) Frame = +2 Query: 74 RNNFLXXXXXXXXXXLPKATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNC 253 RN L LPKA TGTTI G ++ + GIVLGADTRATEG +VADKNC Sbjct: 21 RNAVLEADFAKKGFKLPKARKTGTTIAGVVYKD------GIVLGADTRATEGMVVADKNC 74 Query: 254 EKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQ 433 KIH+ISP I CCGAGTAADT+ TT LISSN+ELHSL TGR PRVVTA L QML+RYQ Sbjct: 75 SKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQ 134 Query: 434 GQIGAALVLGGYDHTGPQLFTV 499 G IGAALVLGG D TGP L+++ Sbjct: 135 GYIGAALVLGGVDVTGPHLYSI 156
>PSB7_MOUSE (P70195) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 175 bits (444), Expect = 5e-44 Identities = 92/142 (64%), Positives = 103/142 (72%) Frame = +2 Query: 74 RNNFLXXXXXXXXXXLPKATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNC 253 RN L LPKA TGTTI G ++ + GIVLGADTRATEG +VADKNC Sbjct: 21 RNAVLEADFAKKGFKLPKARKTGTTIAGVVYKD------GIVLGADTRATEGMVVADKNC 74 Query: 254 EKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQ 433 KIH+ISP I CCGAGTAADT+ TT LISSN+ELHSL TGR PRVVTA L QML+RYQ Sbjct: 75 SKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQ 134 Query: 434 GQIGAALVLGGYDHTGPQLFTV 499 G IGAALVLGG D TGP L+++ Sbjct: 135 GYIGAALVLGGVDVTGPHLYSI 156
>PSB7_HUMAN (Q99436) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 174 bits (442), Expect = 9e-44 Identities = 91/142 (64%), Positives = 102/142 (71%) Frame = +2 Query: 74 RNNFLXXXXXXXXXXLPKATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNC 253 RN L LPK TGTTI G ++ + GIVLGADTRATEG +VADKNC Sbjct: 21 RNAVLEADFAKRGYKLPKVRKTGTTIAGVVYKD------GIVLGADTRATEGMVVADKNC 74 Query: 254 EKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQ 433 KIH+ISP I CCGAGTAADT+ TT LISSN+ELHSL TGR PRVVTA L QML+RYQ Sbjct: 75 SKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQ 134 Query: 434 GQIGAALVLGGYDHTGPQLFTV 499 G IGAALVLGG D TGP L+++ Sbjct: 135 GYIGAALVLGGVDVTGPHLYSI 156
>PSB7_SCHPO (Q09841) Probable proteasome subunit beta type 7 precursor (EC| 3.4.25.1) Length = 267 Score = 174 bits (440), Expect = 2e-43 Identities = 90/126 (71%), Positives = 100/126 (79%) Frame = +2 Query: 122 PKATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAG 301 PKATSTGTTIVG + + IVLGADTRAT GPI+ADKNC+K+H ISP I C GAG Sbjct: 29 PKATSTGTTIVGVIAKDC------IVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAG 82 Query: 302 TAADTEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAALVLGGYDHTG 481 TAADTEF T++ISSNIELHSL T RKPRVVTA+T L Q L+RYQG IGA LVLGGYD G Sbjct: 83 TAADTEFVTSMISSNIELHSLYTNRKPRVVTALTMLKQHLFRYQGHIGAYLVLGGYDCKG 142 Query: 482 PQLFTV 499 P LFT+ Sbjct: 143 PHLFTI 148
>PSB7_YEAST (P25043) Proteasome component PUP1 precursor (EC 3.4.25.1)| (Macropain subunit PUP1) (Proteinase YSCE subunit PUP1) (Multicatalytic endopeptidase complex subunit PUP1) Length = 261 Score = 159 bits (403), Expect = 3e-39 Identities = 85/142 (59%), Positives = 99/142 (69%) Frame = +2 Query: 74 RNNFLXXXXXXXXXXLPKATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNC 253 RNNFL PKATSTGTTIVG F N G+V+ ADTR+T+GPIVADKNC Sbjct: 11 RNNFLAENSHTQ----PKATSTGTTIVGVKFNN------GVVIAADTRSTQGPIVADKNC 60 Query: 254 EKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQ 433 K+H ISP I C GAGTAADTE T LI SNIELHSL T R+PRVV+A+ L Q L++YQ Sbjct: 61 AKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTSREPRVVSALQMLKQHLFKYQ 120 Query: 434 GQIGAALVLGGYDHTGPQLFTV 499 G IGA L++ G D TG LF++ Sbjct: 121 GHIGAYLIVAGVDPTGSHLFSI 142
>PSB7B_ARATH (Q7DLS1) Proteasome subunit beta type 7-B precursor (EC 3.4.25.1)| (Proteasome subunit beta type 2) (20S proteasome beta subunit B-2) (Proteasome component FC) Length = 274 Score = 156 bits (395), Expect = 3e-38 Identities = 78/126 (61%), Positives = 92/126 (73%) Frame = +2 Query: 122 PKATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAG 301 P TGTTIVG +F + G++LGADTRATEGPIVADKNCEKIHY++P I CCGAG Sbjct: 33 PSFLKTGTTIVGLIFKD------GVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAG 86 Query: 302 TAADTEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAALVLGGYDHTG 481 TAADTE T ++SS + LH TGR RVVTA+T L + L+ YQG + AALVLGG D TG Sbjct: 87 TAADTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVDITG 146 Query: 482 PQLFTV 499 P L T+ Sbjct: 147 PHLHTI 152
>PSB7A_ARATH (O23710) Proteasome subunit beta type 7-A precursor (EC 3.4.25.1)| (Proteasome subunit beta type 2) (20S proteasome beta subunit B-1) (Proteasome component FA) (Proteasome component FB) Length = 273 Score = 156 bits (394), Expect = 3e-38 Identities = 77/126 (61%), Positives = 92/126 (73%) Frame = +2 Query: 122 PKATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAG 301 P TGTTIVG +F + G++LGADTRATEGPIVADKNCEKIHY++P I CCGAG Sbjct: 33 PSFLKTGTTIVGLIFKD------GVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAG 86 Query: 302 TAADTEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAALVLGGYDHTG 481 TAADTE T ++SS + LH TGR RV+TA+T L + L+ YQG + AALVLGG D TG Sbjct: 87 TAADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVDITG 146 Query: 482 PQLFTV 499 P L T+ Sbjct: 147 PHLHTI 152
>PSB10_HUMAN (P40306) Proteasome subunit beta type 10 precursor (EC 3.4.25.1)| (Proteasome MECl-1) (Macropain subunit MECl-1) (Multicatalytic endopeptidase complex subunit MECl-1) Length = 273 Score = 152 bits (383), Expect = 6e-37 Identities = 72/127 (56%), Positives = 93/127 (73%) Frame = +2 Query: 119 LPKATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGA 298 +P A TGTTI G +F + G++LGADTRAT +VADK+CEKIH+I+P I CCGA Sbjct: 32 VPHARKTGTTIAGLVFQD------GVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGA 85 Query: 299 GTAADTEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAALVLGGYDHT 478 G AAD E TT +++S +ELH+L TGR+PRV T L Q L+RYQG +GA+L++GG D T Sbjct: 86 GVAADAEMTTRMVASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLIVGGVDLT 145 Query: 479 GPQLFTV 499 GPQL+ V Sbjct: 146 GPQLYGV 152
>PSB10_MOUSE (O35955) Proteasome subunit beta type 10 precursor (EC 3.4.25.1)| (Proteasome MECl-1) (Macropain subunit MECl-1) (Multicatalytic endopeptidase complex subunit MECl-1) Length = 273 Score = 151 bits (381), Expect = 1e-36 Identities = 73/127 (57%), Positives = 92/127 (72%) Frame = +2 Query: 119 LPKATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGA 298 +P A TGTTI G +F + G++LGADTRAT +VADK+CEKIH+I+P I CCGA Sbjct: 32 VPHARKTGTTIAGLVFRD------GVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGA 85 Query: 299 GTAADTEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAALVLGGYDHT 478 G AADTE TT + +S +ELH+L TGR+PRV T L Q L+RYQG +GA+LV+GG D Sbjct: 86 GVAADTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLVVGGVDLN 145 Query: 479 GPQLFTV 499 GPQL+ V Sbjct: 146 GPQLYEV 152
>PSB6_MOUSE (Q60692) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Macropain delta chain) (Multicatalytic endopeptidase complex delta chain) (Proteasome subunit Y) Length = 238 Score = 79.3 bits (194), Expect = 5e-15 Identities = 43/126 (34%), Positives = 70/126 (55%), Gaps = 1/126 (0%) Frame = +2 Query: 125 KATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGT 304 + STGTTI+ F G+VLGAD+R T G +A++ +K+ I I CC +G+ Sbjct: 28 REVSTGTTIMAVQFNG------GVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGS 81 Query: 305 AADTEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAALVLGGYD-HTG 481 AADT+ ++ + HS+ P V TA + +M YRY+ + A +++ G+D G Sbjct: 82 AADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEG 141 Query: 482 PQLFTV 499 Q+++V Sbjct: 142 GQVYSV 147
>PSB6_HUMAN (P28072) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Macropain delta chain) (Multicatalytic endopeptidase complex delta chain) (Proteasome subunit Y) Length = 239 Score = 79.0 bits (193), Expect = 7e-15 Identities = 43/126 (34%), Positives = 70/126 (55%), Gaps = 1/126 (0%) Frame = +2 Query: 125 KATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGT 304 + STGTTI+ F G+VLGAD+R T G +A++ +K+ I I CC +G+ Sbjct: 29 REVSTGTTIMAVQFDG------GVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGS 82 Query: 305 AADTEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAALVLGGYD-HTG 481 AADT+ ++ + HS+ P V TA + +M YRY+ + A +++ G+D G Sbjct: 83 AADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEG 142 Query: 482 PQLFTV 499 Q+++V Sbjct: 143 GQVYSV 148
>PSB6_RAT (P28073) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Macropain delta chain) (Multicatalytic endopeptidase complex delta chain) (Proteasome subunit Y) (Proteasome chain 5) Length = 238 Score = 79.0 bits (193), Expect = 7e-15 Identities = 43/126 (34%), Positives = 70/126 (55%), Gaps = 1/126 (0%) Frame = +2 Query: 125 KATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGT 304 + STGTTI+ F G+VLGAD+R T G +A++ +K+ I I CC +G+ Sbjct: 28 REVSTGTTIMAVQFDG------GVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGS 81 Query: 305 AADTEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAALVLGGYD-HTG 481 AADT+ ++ + HS+ P V TA + +M YRY+ + A +++ G+D G Sbjct: 82 AADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEG 141 Query: 482 PQLFTV 499 Q+++V Sbjct: 142 GQVYSV 147
>PSB9_SALSA (Q9DD33) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Low molecular mass protein 2) Length = 217 Score = 73.2 bits (178), Expect = 4e-13 Identities = 36/121 (29%), Positives = 67/121 (55%) Frame = +2 Query: 119 LPKATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGA 298 L + TGTTI+ F G+VLG+D+R + G V ++ K+ + I C + Sbjct: 11 LSEEVKTGTTIIAIEFDG------GVVLGSDSRVSAGETVVNRVMNKLSLLHDKIYCALS 64 Query: 299 GTAADTEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAALVLGGYDHT 478 G+AAD + +++ +++HS+ G P+V +A T + + Y+Y+ ++ A L++ G+D Sbjct: 65 GSAADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKR 124 Query: 479 G 481 G Sbjct: 125 G 125
>PSB9_ONCMY (Q9PT26) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Low molecular mass protein 2) Length = 217 Score = 72.4 bits (176), Expect = 6e-13 Identities = 36/121 (29%), Positives = 66/121 (54%) Frame = +2 Query: 119 LPKATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGA 298 L + TGTTI+ F G+VLG+D+R + G V ++ K+ + I C + Sbjct: 11 LSEEVKTGTTIIAIEFDG------GVVLGSDSRVSAGETVVNRVMNKLSLLHDKIYCALS 64 Query: 299 GTAADTEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAALVLGGYDHT 478 G+AAD + +++ +++HS+ G P+V +A T + + Y+Y+ + A L++ G+D Sbjct: 65 GSAADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEDLSAHLIVAGWDKR 124 Query: 479 G 481 G Sbjct: 125 G 125
>PSB6_SCHPO (O43063) Probable proteasome subunit beta type 6 precursor (EC| 3.4.25.1) Length = 226 Score = 72.0 bits (175), Expect = 8e-13 Identities = 37/121 (30%), Positives = 67/121 (55%), Gaps = 1/121 (0%) Frame = +2 Query: 140 GTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTE 319 GTTI + + G++L AD+R T G +A++ +K+ ++ I CC +G+AADT+ Sbjct: 24 GTTITALRYKD------GVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQ 77 Query: 320 FTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAALVLGGYDH-TGPQLFT 496 L+ + ++ + G P V TA T +M Y+ + + A L++ GYD TG +++ Sbjct: 78 TVADLLKYYLSMYRIQFGHDPSVHTAATLASEMCYQNKNMLSAGLIVAGYDEKTGGDVYS 137 Query: 497 V 499 + Sbjct: 138 I 138
>PSB9_ORYLA (Q8UW64) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Low molecular mass protein 2) Length = 217 Score = 68.9 bits (167), Expect = 7e-12 Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 1/126 (0%) Frame = +2 Query: 119 LPKATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGA 298 + + TGTTI+ F G+VLG+D+R + G V ++ K+ + I C + Sbjct: 11 ISEEVKTGTTIIAIEFNG------GVVLGSDSRVSAGDSVVNRVMNKLSPLHDKIYCALS 64 Query: 299 GTAADTEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAALVLGGYD-H 475 G+AAD + +++ +++HSL P+V +A T + + Y+Y+ ++ A L++ G+D Sbjct: 65 GSAADAQTIAEMVNYQLDVHSLEIDEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDRR 124 Query: 476 TGPQLF 493 G Q+F Sbjct: 125 DGGQVF 130
>PSB6_YEAST (P38624) Proteasome component PRE3 precursor (EC 3.4.25.1)| (Macropain subunit PRE3) (Proteinase YSCE subunit PRE3) (Multicatalytic endopeptidase complex subunit PRE3) Length = 215 Score = 65.1 bits (157), Expect = 1e-10 Identities = 34/113 (30%), Positives = 63/113 (55%) Frame = +2 Query: 134 STGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAAD 313 S GT+I+ F + G++LGAD+R T G +A++ +K+ + I CC +G+AAD Sbjct: 17 SLGTSIMAVTFKD------GVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAAD 70 Query: 314 TEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAALVLGGYD 472 T+ ++ ++EL++ G P TA + ++ Y + + A +++ GYD Sbjct: 71 TQAIADIVQYHLELYTSQYG-TPSTETAASVFKELCYENKDNLTAGIIVAGYD 122
>PSB5A_ARATH (O23717) Proteasome subunit beta type 5-A precursor (EC 3.4.25.1)| (20S proteasome beta subunit E-1) (Proteasome epsilon-1 chain) (Proteasome component E) Length = 274 Score = 63.2 bits (152), Expect = 4e-10 Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 1/121 (0%) Frame = +2 Query: 140 GTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTE 319 GTT + +F G+++ AD+RA+ G ++ ++ +KI I+P + AG AAD + Sbjct: 57 GTTTLAFIF------KGGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQ 110 Query: 320 FTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQ-IGAALVLGGYDHTGPQLFT 496 F + LH L R+ V A L MLY Y+G + ++ G+D TGP L+ Sbjct: 111 FWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYY 170 Query: 497 V 499 V Sbjct: 171 V 171
>PSB5B_ARATH (Q9LIP2) Proteasome subunit beta type 5-B precursor (EC 3.4.25.1)| (20S proteasome beta subunit E-2) (Proteasome epsilon-2 chain) Length = 273 Score = 62.8 bits (151), Expect = 5e-10 Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 1/121 (0%) Frame = +2 Query: 140 GTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTE 319 GTT + +F G+++ AD+RA+ G ++ ++ +KI I+P + AG AAD + Sbjct: 57 GTTTLAFIFKE------GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQ 110 Query: 320 FTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQ-IGAALVLGGYDHTGPQLFT 496 F + LH L R+ V A L MLY Y+G + ++ G+D TGP L+ Sbjct: 111 FWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYY 170 Query: 497 V 499 V Sbjct: 171 V 171
>PSB5_SPIOL (O24361) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (20S proteasome subunit E) (Proteasome epsilon chain) Length = 272 Score = 62.8 bits (151), Expect = 5e-10 Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 1/121 (0%) Frame = +2 Query: 140 GTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTE 319 GTT + +F + G+++ AD+RA+ G ++ ++ +KI I+P + AG AAD + Sbjct: 55 GTTTLAFIFKH------GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQ 108 Query: 320 FTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQ-IGAALVLGGYDHTGPQLFT 496 F + LH L R+ V A L +LY Y+G + ++ G+D TGP L+ Sbjct: 109 FWHRNLGIKCRLHELANKRRISVTGASKLLANILYNYRGMGLSVGTMIAGWDETGPGLYY 168 Query: 497 V 499 V Sbjct: 169 V 169
>PSB5_RAT (P28075) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome epsilon chain) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome subunit X) (Proteasome chain 6) Length = 208 Score = 62.8 bits (151), Expect = 5e-10 Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 1/104 (0%) Frame = +2 Query: 191 GIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGT 370 G+++ AD+RAT GP +A + +K+ I+P + AG AAD F L++ ++ L Sbjct: 15 GVIVAADSRATAGPYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRN 74 Query: 371 GRKPRVVTAMTXLXQMLYRYQGQ-IGAALVLGGYDHTGPQLFTV 499 + V A L M+Y+Y+G + ++ G+D GP L+ V Sbjct: 75 KERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYV 118
>PSB9_RAT (P28077) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 62.4 bits (150), Expect = 6e-10 Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 1/120 (0%) Frame = +2 Query: 137 TGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADT 316 TGTTI+ F G+V+G+D+R + G V ++ +K+ + I C +G+AAD Sbjct: 19 TGTTIMAVEFDG------GVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIYCALSGSAADA 72 Query: 317 EFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAALVLGGYD-HTGPQLF 493 + + + +ELH L P V+ A + + Y+Y+ + A L++ G+D H G Q++ Sbjct: 73 QAIADMAAYQLELHGLELEEPPLVLAAANIVKNISYKYREDLLAHLMVAGWDQHEGGQVY 132
>PSB9_HUMAN (P28065) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 62.0 bits (149), Expect = 8e-10 Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Frame = +2 Query: 119 LPKA--TSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCC 292 LP+A TGTTI+ F G+V+G+D+R + G V ++ +K+ + I C Sbjct: 11 LPRAGEVHTGTTIMAVEFDG------GVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCA 64 Query: 293 GAGTAADTEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAALVLGGYD 472 +G+AAD + + + +ELH + P V+ A + + Y+Y+ + A L++ G+D Sbjct: 65 LSGSAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWD 124
>PSB6_ARATH (Q8LD27) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome subunit beta type 1) (20S proteasome beta subunit A-1) (Proteasome component CD) Length = 233 Score = 62.0 bits (149), Expect = 8e-10 Identities = 31/113 (27%), Positives = 60/113 (53%) Frame = +2 Query: 134 STGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAAD 313 S GTTI+G + G+VLGAD+R + G VA++ +KI ++ + C +G+AAD Sbjct: 10 SMGTTIIGVTYNG------GVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAAD 63 Query: 314 TEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAALVLGGYD 472 ++ + + + H++ G+ V + + + Y + + L++GG+D Sbjct: 64 SQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWD 116
>PSB6_TOBAC (P93395) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Tobacco cryptogein-induced protein 7) (tcI 7) Length = 234 Score = 61.2 bits (147), Expect = 1e-09 Identities = 31/113 (27%), Positives = 60/113 (53%) Frame = +2 Query: 134 STGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAAD 313 S GTTI+G + G+VLGAD+R + G VA++ +KI ++ + C +G+AAD Sbjct: 11 SMGTTIIGVTYNG------GVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAAD 64 Query: 314 TEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAALVLGGYD 472 ++ + + + H++ G+ V A + Y + ++ +++GG+D Sbjct: 65 SQIVSDYVRYFLHQHTIQLGQPATVKVAANLTRLLSYNNKDRLQTGMIIGGWD 117
>PSB9_MUSPL (O35523) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 60.8 bits (146), Expect = 2e-09 Identities = 34/116 (29%), Positives = 60/116 (51%) Frame = +2 Query: 125 KATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGT 304 K TGTTI+ F G+V+G+D+R + G V ++ +K+ + I C +G+ Sbjct: 15 KEVHTGTTIMAVEFDG------GVVVGSDSRVSAGEAVVNRVFDKLSPLHQRIFCALSGS 68 Query: 305 AADTEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAALVLGGYD 472 AAD + + + +ELH L P V+ A + + Y+Y+ + A L++ G+D Sbjct: 69 AADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWD 124
>PSB5_MOUSE (O55234) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome epsilon chain) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome subunit X) (Proteasome chain 6) Length = 209 Score = 59.7 bits (143), Expect = 4e-09 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 1/104 (0%) Frame = +2 Query: 191 GIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGT 370 G+++ AD+RAT G +A + +K+ I+P + AG AAD F L++ ++ L Sbjct: 15 GVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRN 74 Query: 371 GRKPRVVTAMTXLXQMLYRYQGQ-IGAALVLGGYDHTGPQLFTV 499 + V A L M+Y+Y+G + ++ G+D GP L+ V Sbjct: 75 KERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYV 118
>PSB9_MUSSI (O35524) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 59.7 bits (143), Expect = 4e-09 Identities = 33/112 (29%), Positives = 59/112 (52%) Frame = +2 Query: 137 TGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADT 316 TGTTI+ F G+V+G+D+R + G V ++ +K+ + I C +G+AAD Sbjct: 19 TGTTIMAVEFDG------GVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADA 72 Query: 317 EFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAALVLGGYD 472 + + + +ELH L P V+ A + + Y+Y+ + A L++ G+D Sbjct: 73 QAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWD 124
>PSB9_MUSMB (O35522) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 59.7 bits (143), Expect = 4e-09 Identities = 33/112 (29%), Positives = 59/112 (52%) Frame = +2 Query: 137 TGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADT 316 TGTTI+ F G+V+G+D+R + G V ++ +K+ + I C +G+AAD Sbjct: 19 TGTTIMAVEFDG------GVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADA 72 Query: 317 EFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAALVLGGYD 472 + + + +ELH L P V+ A + + Y+Y+ + A L++ G+D Sbjct: 73 QAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWD 124
>PSB9_MUSDU (O35521) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 59.7 bits (143), Expect = 4e-09 Identities = 33/112 (29%), Positives = 59/112 (52%) Frame = +2 Query: 137 TGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADT 316 TGTTI+ F G+V+G+D+R + G V ++ +K+ + I C +G+AAD Sbjct: 19 TGTTIMAVEFDG------GVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIFCALSGSAADA 72 Query: 317 EFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAALVLGGYD 472 + + + +ELH L P V+ A + + Y+Y+ + A L++ G+D Sbjct: 73 QAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWD 124
>PSB9_MOUSE (P28076) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) (LMP-2d) Length = 219 Score = 59.7 bits (143), Expect = 4e-09 Identities = 33/112 (29%), Positives = 59/112 (52%) Frame = +2 Query: 137 TGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADT 316 TGTTI+ F G+V+G+D+R + G V ++ +K+ + I C +G+AAD Sbjct: 19 TGTTIMAVEFDG------GVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADA 72 Query: 317 EFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAALVLGGYD 472 + + + +ELH L P V+ A + + Y+Y+ + A L++ G+D Sbjct: 73 QAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWD 124
>PSB5_HUMAN (P28074) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome epsilon chain) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome subunit X) (Proteasome chain 6) (Proteasome subunit MB1) Length = 208 Score = 59.7 bits (143), Expect = 4e-09 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 1/104 (0%) Frame = +2 Query: 191 GIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGT 370 G+++ AD+RAT G +A + +K+ I+P + AG AAD F L++ ++ L Sbjct: 15 GVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRN 74 Query: 371 GRKPRVVTAMTXLXQMLYRYQGQ-IGAALVLGGYDHTGPQLFTV 499 + V A L M+Y+Y+G + ++ G+D GP L+ V Sbjct: 75 KERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYV 118
>PSB5_CHICK (P34065) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome chain 1) (Macropain chain 1) (Multicatalytic endopeptidase complex chain 1) (Proteasome subunit C1) (Fragment) Length = 256 Score = 58.5 bits (140), Expect = 9e-09 Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 1/121 (0%) Frame = +2 Query: 140 GTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTE 319 GTT + F + G+V+ D+RAT G +A + +K+ I+P + AG AAD Sbjct: 55 GTTTLAFKFAH------GVVVAVDSRATAGSYIASQTVQKVIEINPSLLGTMAGGAADCS 108 Query: 320 FTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQ-IGAALVLGGYDHTGPQLFT 496 F L++ ++ L V A L M+Y+Y+G + ++ G+D GP L+ Sbjct: 109 FWERLLARQCRVYELRNKEPISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYY 168 Query: 497 V 499 V Sbjct: 169 V 169
>PSMB_PYRFU (Q8U125) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 206 Score = 57.4 bits (137), Expect = 2e-08 Identities = 44/122 (36%), Positives = 59/122 (48%), Gaps = 2/122 (1%) Frame = +2 Query: 140 GTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTE 319 GTT VG + G+VL ADTRA+ G I+ KN KIH I + GAG D Sbjct: 10 GTTTVGLVCKE------GVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDIL 63 Query: 320 FTTALISSNIELHSLGTGRKPRVVTAMTXLXQML--YRYQGQIGAALVLGGYDHTGPQLF 493 L+ + L+ G++ V T L +L +Y +G LV GGYD P+LF Sbjct: 64 NLVRLLKAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLV-GGYDEK-PRLF 121 Query: 494 TV 499 +V Sbjct: 122 SV 123
>PSB8_CANFA (Q5W416) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 57.4 bits (137), Expect = 2e-08 Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 1/104 (0%) Frame = +2 Query: 191 GIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGT 370 G+++ D+RAT G ++ K+ I+P + +G AAD ++ L++ L+ L Sbjct: 83 GVIVAVDSRATAGNYISSSRVNKVIEINPSLLGTMSGCAADCQYWERLLAKECRLYYLRN 142 Query: 371 GRKPRVVTAMTXLXQMLYRYQG-QIGAALVLGGYDHTGPQLFTV 499 G + V A L M+Y+Y+G + ++ G+D GP L+ V Sbjct: 143 GERISVSAASKLLSNMVYQYRGMDLSMGSMICGWDKKGPGLYYV 186
>PSMB_ARCFU (Q9P996) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 213 Score = 56.6 bits (135), Expect = 4e-08 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 2/122 (1%) Frame = +2 Query: 140 GTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTE 319 GTT VG + + G+V+ + RAT G +A K +KI+ I+ + AG+ D + Sbjct: 11 GTTTVGLVCKD------GVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQ 64 Query: 320 FTTALISSNIELHSLGTGRKPRVVTAMTXLXQML--YRYQGQIGAALVLGGYDHTGPQLF 493 F +I L+ + RKP V T +L YRY + L++GG D G ++ Sbjct: 65 FLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYL-VQLLIGGIDSEGKSIY 123 Query: 494 TV 499 ++ Sbjct: 124 SI 125
>PSB5_YEAST (P30656) Proteasome component PRE2 precursor (EC 3.4.25.1)| (Macropain subunit PRE2) (Proteinase YSCE subunit PRE2) (Multicatalytic endopeptidase complex subunit PRE2) Length = 287 Score = 53.9 bits (128), Expect = 2e-07 Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 2/105 (1%) Frame = +2 Query: 191 GIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGT 370 GI++ D+RAT G VA + +K+ I+P + AG AAD +F + S LH L Sbjct: 86 GIIVAVDSRATAGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELRE 145 Query: 371 GRKPRVVTAMTXLXQMLYRYQGQ-IGAALVLGGYDH-TGPQLFTV 499 + V A L ++Y+Y+G + ++ GY GP ++ V Sbjct: 146 KERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYV 190
>PSB8_MOUSE (P28063) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 53.9 bits (128), Expect = 2e-07 Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 1/104 (0%) Frame = +2 Query: 191 GIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGT 370 G+++ D+RAT G ++ K+ I+P + +G AAD ++ L++ L+ L Sbjct: 83 GVIVAVDSRATAGSYISSLRMNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRN 142 Query: 371 GRKPRVVTAMTXLXQMLYRYQGQ-IGAALVLGGYDHTGPQLFTV 499 G + V A L M+ +Y+G + ++ G+D GP L+ V Sbjct: 143 GERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKGPGLYYV 186
>PSB8_RAT (P28064) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 52.8 bits (125), Expect = 5e-07 Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 1/104 (0%) Frame = +2 Query: 191 GIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGT 370 G+++ D+RA+ G +A K+ I+P + +G AAD ++ L++ L+ L Sbjct: 83 GVIVAVDSRASAGSYIATIRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRN 142 Query: 371 GRKPRVVTAMTXLXQMLYRYQGQ-IGAALVLGGYDHTGPQLFTV 499 G + V A L M+ +Y+G + ++ G+D GP L+ V Sbjct: 143 GERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKGPGLYYV 186
>PSMB_PYRAB (Q9V0N9) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 207 Score = 52.0 bits (123), Expect = 9e-07 Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 1/121 (0%) Frame = +2 Query: 140 GTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTE 319 GTT VG + + G+VL AD RA+ G IV KN KIH I + GAG D Sbjct: 10 GTTTVGIVCSD------GVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDIL 63 Query: 320 FTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQG-QIGAALVLGGYDHTGPQLFT 496 L+ + +L+ +G++ V T L ML + A ++GG+D P+L++ Sbjct: 64 NLVRLLRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGFDEK-PRLYS 122 Query: 497 V 499 V Sbjct: 123 V 123
>PSMB_METTE (Q9P992) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 210 Score = 51.2 bits (121), Expect = 1e-06 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 1/121 (0%) Frame = +2 Query: 140 GTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTE 319 GTT VG + T GIVL ++ RAT G +A K +K++ I + AG+ D + Sbjct: 9 GTTTVGVVC------TDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQ 62 Query: 320 FTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQ-GQIGAALVLGGYDHTGPQLFT 496 L+S +L+ + + T + L R + + L++GG D GP +++ Sbjct: 63 QLVRLVSVESQLYKMRRDESMTIKGITTLMSNFLSRNRYYPMMVQLLIGGVDKNGPGIYS 122 Query: 497 V 499 + Sbjct: 123 L 123
>PSB5_SCHPO (P30655) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome component pts1) (Macropain subunit pts1) (Multicatalytic endopeptidase complex subunit pts1) Length = 272 Score = 51.2 bits (121), Expect = 1e-06 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 1/104 (0%) Frame = +2 Query: 191 GIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGT 370 GIV+ D+RA+ GP++A + +K+ I+P + AG AAD +F ++ LH L Sbjct: 72 GIVVCVDSRASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQFWETVLGMECRLHQLRN 131 Query: 371 GRKPRVVTAMTXLXQMLYRYQGQ-IGAALVLGGYDHTGPQLFTV 499 V A L + Y Y+G + +L G G L+ + Sbjct: 132 KELISVSAASKILSNITYSYKGYGLSMGTMLAGTGKGGTALYYI 175
>PSB8_HUMAN (P28062) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 50.4 bits (119), Expect = 3e-06 Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 1/104 (0%) Frame = +2 Query: 191 GIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGT 370 G++ D+RA+ G ++ K+ I+P + +G AAD ++ L++ L+ L Sbjct: 83 GVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRN 142 Query: 371 GRKPRVVTAMTXLXQMLYRYQGQ-IGAALVLGGYDHTGPQLFTV 499 G + V A L M+ +Y+G + ++ G+D GP L+ V Sbjct: 143 GERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPGLYYV 186
>PSMB_PYRHO (O50110) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 207 Score = 50.1 bits (118), Expect = 3e-06 Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 2/122 (1%) Frame = +2 Query: 140 GTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTE 319 GTT VG + + G+VL AD RA+ G I+ +N KIH I + GAG D Sbjct: 10 GTTTVGIVCKD------GVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGDIL 63 Query: 320 FTTALISSNIELHSLGTGRKPRVVTAMTXLXQML--YRYQGQIGAALVLGGYDHTGPQLF 493 L+ + +L+ +G++ V T L ++ +Y + A ++GGYD P+L+ Sbjct: 64 NLVRLLRAEAKLYYSQSGKRMSVKALATLLANIMNGAKYFPYL-AWFLVGGYDEK-PKLY 121 Query: 494 TV 499 +V Sbjct: 122 SV 123
>PSMB_SULSO (Q9UXF3) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 208 Score = 45.1 bits (105), Expect = 1e-04 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 2/122 (1%) Frame = +2 Query: 140 GTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTE 319 GTT VG + G++L AD RA+ G VA+K K+ YI+ I AG+ AD + Sbjct: 14 GTTTVGIRVND------GVILAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQ 67 Query: 320 FTTALISSNIELHSLGTGRKPRVVTAMTXLXQML--YRYQGQIGAALVLGGYDHTGPQLF 493 F ++ + +S+ + T L +L +Y I +++GGYD P+LF Sbjct: 68 FIYDVLKNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYI-VQILIGGYDDQ-PRLF 125 Query: 494 TV 499 + Sbjct: 126 NL 127
>PSA5B_ARATH (Q42134) Proteasome subunit alpha type 5-B (EC 3.4.25.1) (20S| proteasome alpha subunit E-2) (Proteasome component Z) Length = 237 Score = 39.7 bits (91), Expect = 0.005 Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 8/109 (7%) Frame = +2 Query: 191 GIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGT 370 G+VL + R T P++ + EKI I I C +G AD + H Sbjct: 45 GVVLAVEKRITS-PLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSY 103 Query: 371 GRKPRVVTAMTXLXQMLYRY-QGQ-------IGAALVLGGYDHTGPQLF 493 G V + L + R+ +G+ G +L++ G+D GP L+ Sbjct: 104 GEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHDENGPSLY 152
>PSA5A_ARATH (O81149) Proteasome subunit alpha type 5-A (EC 3.4.25.1) (20S| proteasome alpha subunit E-1) Length = 237 Score = 39.7 bits (91), Expect = 0.005 Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 8/109 (7%) Frame = +2 Query: 191 GIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGT 370 G+VL + R T P++ + EKI I I C +G AD + H Sbjct: 45 GVVLAVEKRITS-PLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSY 103 Query: 371 GRKPRVVTAMTXLXQMLYRY-QGQ-------IGAALVLGGYDHTGPQLF 493 G V + L + R+ +G+ G +L++ G+D GP L+ Sbjct: 104 GEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHDENGPSLY 152
>PSA5_SOYBN (Q9M4T8) Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S| proteasome alpha subunit E) (20S proteasome subunit alpha-5) Length = 237 Score = 38.9 bits (89), Expect = 0.008 Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 8/109 (7%) Frame = +2 Query: 191 GIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGT 370 G+VL + R T P++ + EKI I I C +G AD + H Sbjct: 45 GVVLAVEKRITS-PLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSY 103 Query: 371 GRKPRVVTAMTXLXQMLYRY--------QGQIGAALVLGGYDHTGPQLF 493 G V + L + R+ G +L++ G+D GP L+ Sbjct: 104 GEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLY 152
>PSA5_ORYSA (Q9LSU1) Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S| proteasome alpha subunit E) (20S proteasome subunit alpha-5) Length = 237 Score = 38.5 bits (88), Expect = 0.010 Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 8/109 (7%) Frame = +2 Query: 191 GIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGT 370 G+VL + R T P++ + EKI I I C +G AD + H Sbjct: 45 GVVLAVEKRVTS-PLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSY 103 Query: 371 GRKPRVVTAMTXLXQMLYRY--------QGQIGAALVLGGYDHTGPQLF 493 G V + + + R+ G +L++ G+D GP L+ Sbjct: 104 GEPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLY 152
>PSMA1_HALMA (Q5V2X8) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 38.1 bits (87), Expect = 0.013 Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 5/128 (3%) Frame = +2 Query: 125 KATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGT 304 +A GT +G + G+VL D R P++ + EKIH I AG Sbjct: 31 EAVKRGTASIGVRTSD------GVVLAVDKRI-RSPLMERSSVEKIHKADDHIGIASAGH 83 Query: 305 AADTEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQG-----QIGAALVLGGY 469 AD +++ L G V T + + +Y G AL++GG Sbjct: 84 VADARQLIDFARRQAQVNQLRYGEPVGVETLTKEITDYIQQYTQVGGARPFGVALIIGGI 143 Query: 470 DHTGPQLF 493 + P+LF Sbjct: 144 VNGEPRLF 151
>PSMA1_HALVO (Q9V2V6) Proteasome alpha-1 subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha-1 subunit) Length = 252 Score = 37.7 bits (86), Expect = 0.017 Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 5/106 (4%) Frame = +2 Query: 191 GIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGT 370 G+VL AD R+ P++ + EKIH I AG AD +++ L Sbjct: 47 GVVLAADKRS-RSPLMEPTSVEKIHKADDHIGIASAGHVADARQLIDFARHQSQVNRLRY 105 Query: 371 GRKPRVVTAMTXLXQMLYRYQG-----QIGAALVLGGYDHTGPQLF 493 G + T + + +Y G AL++GG ++ P+L+ Sbjct: 106 GEPIGIETLTKEVTDHIQQYTQVGGARPFGVALLIGGVENGTPRLY 151
>PSA5_MOUSE (Q9Z2U1) Proteasome subunit alpha type 5 (EC 3.4.25.1) (Proteasome| zeta chain) (Macropain zeta chain) (Multicatalytic endopeptidase complex zeta chain) Length = 241 Score = 37.0 bits (84), Expect = 0.029 Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 12/135 (8%) Frame = +2 Query: 125 KATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGT 304 +A G+T +G + G+ L + R T P++ + EKI I I C +G Sbjct: 29 EAIKLGSTAIGI------QTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDAHIGCAMSGL 81 Query: 305 AADTEFTTALISSNIELHSLG-TGRKPRVVTAMTXLXQMLYRYQGQ-----------IGA 448 AD + T + + +E + T + V ++T L G+ G Sbjct: 82 IADAK--TLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGV 139 Query: 449 ALVLGGYDHTGPQLF 493 AL+ GG D GPQLF Sbjct: 140 ALLFGGVDEKGPQLF 154
>PSA5_HUMAN (P28066) Proteasome subunit alpha type 5 (EC 3.4.25.1) (Proteasome| zeta chain) (Macropain zeta chain) (Multicatalytic endopeptidase complex zeta chain) Length = 241 Score = 37.0 bits (84), Expect = 0.029 Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 12/135 (8%) Frame = +2 Query: 125 KATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGT 304 +A G+T +G + G+ L + R T P++ + EKI I I C +G Sbjct: 29 EAIKLGSTAIGI------QTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDAHIGCAMSGL 81 Query: 305 AADTEFTTALISSNIELHSLG-TGRKPRVVTAMTXLXQMLYRYQGQ-----------IGA 448 AD + T + + +E + T + V ++T L G+ G Sbjct: 82 IADAK--TLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGV 139 Query: 449 ALVLGGYDHTGPQLF 493 AL+ GG D GPQLF Sbjct: 140 ALLFGGVDEKGPQLF 154
>PSA3_ORYSA (Q9LSU0) Proteasome subunit alpha type 3 (EC 3.4.25.1) (20S| proteasome alpha subunit G) (20S proteasome subunit alpha-7) Length = 249 Score = 36.6 bits (83), Expect = 0.038 Identities = 34/130 (26%), Positives = 49/130 (37%), Gaps = 5/130 (3%) Frame = +2 Query: 125 KATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGT 304 KA T+VG + GIVLG + T ++ N +IH + AG Sbjct: 29 KAVDNSGTVVGIKCKD------GIVLGVEKLVTSKMMLEGSN-RRIHSVHWHSGLAVAGL 81 Query: 305 AADTEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQM-----LYRYQGQIGAALVLGGY 469 AAD + S + G V + LY + G ++LGGY Sbjct: 82 AADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYWWLRPFGCGVILGGY 141 Query: 470 DHTGPQLFTV 499 D GPQL+ + Sbjct: 142 DRDGPQLYMI 151
>PSA5_RAT (P34064) Proteasome subunit alpha type 5 (EC 3.4.25.1) (Proteasome| zeta chain) (Macropain zeta chain) (Multicatalytic endopeptidase complex zeta chain) Length = 241 Score = 36.2 bits (82), Expect = 0.050 Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 12/113 (10%) Frame = +2 Query: 191 GIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLG- 367 G+ L + R T P++ + EKI I I C +G AD + T + + +E + Sbjct: 45 GVCLAVEKRITS-PLMEPSSIEKIVEIDAHIGCAMSGLIADAK--TLIDKARVETQNHWF 101 Query: 368 TGRKPRVVTAMTXLXQMLYRYQGQ-----------IGAALVLGGYDHTGPQLF 493 T + V ++T L G+ G AL+ GG D GPQLF Sbjct: 102 TYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLF 154
>TPIS_METBR (O74025) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 226 Score = 36.2 bits (82), Expect = 0.050 Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 15/87 (17%) Frame = +2 Query: 119 LPKATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPI--------------VADKNCE 256 + KA S G + V C NIE +A L D A E P + +K E Sbjct: 111 IKKADSLGLSTVVCT-NNIETSSAAATLNPDFVAIEPPELIGSGIPVSKPEPEIVEKTVE 169 Query: 257 KIHYISPXIR-CCGAGTAADTEFTTAL 334 IH I+P +R CGAG + + A+ Sbjct: 170 SIHNINPEVRVLCGAGISTGDDLKAAI 196
>PSB4_DROME (Q9VNA5) Probable proteasome subunit beta type 4 (EC 3.4.25.1)| Length = 268 Score = 35.8 bits (81), Expect = 0.065 Identities = 27/122 (22%), Positives = 59/122 (48%), Gaps = 4/122 (3%) Frame = +2 Query: 128 ATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTA 307 +++TGT+++G + + G++L ADT + G + +N E++ ++ I G+G Sbjct: 53 SSTTGTSVLGIRYDS------GVMLAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDF 106 Query: 308 ADTEFTTALISSN-IELHSLGTGRKPRVVTAMTXLXQMLYRYQGQIGAA---LVLGGYDH 475 AD + I IE + + + + + ++LY + ++ +V+GG D+ Sbjct: 107 ADIQSIKRNIDQKMIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDN 166 Query: 476 TG 481 G Sbjct: 167 EG 168
>PSA3_ARATH (O23715) Proteasome subunit alpha type 3 (EC 3.4.25.1) (Proteasome| subunit alpha type 7) (20S proteasome alpha subunit G-1) (Proteasome component 8) (DiDi 17A-2a) Length = 249 Score = 35.4 bits (80), Expect = 0.085 Identities = 33/130 (25%), Positives = 48/130 (36%), Gaps = 5/130 (3%) Frame = +2 Query: 125 KATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGT 304 KA T+VG + GIV+G + ++ N +IH + AG Sbjct: 29 KAVDNSGTVVGIKCKD------GIVMGVEKLIASKMMLPGSN-RRIHSVHRHAGMAVAGL 81 Query: 305 AADTEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQM-----LYRYQGQIGAALVLGGY 469 AAD A S + G V + LY + G ++LGGY Sbjct: 82 AADGRQIVARAKSEARSYESVYGDAVPVKELSERVASYVHLCTLYWWLRPFGCGVILGGY 141 Query: 470 DHTGPQLFTV 499 D GPQL+ + Sbjct: 142 DRDGPQLYMI 151
>PSA3_SPIOL (O24362) Proteasome subunit alpha type 3 (EC 3.4.25.1) (20S| proteasome alpha subunit G) (20S proteasome subunit alpha-7) (Proteasome component C8) Length = 249 Score = 35.0 bits (79), Expect = 0.11 Identities = 30/108 (27%), Positives = 41/108 (37%), Gaps = 5/108 (4%) Frame = +2 Query: 191 GIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGT 370 GIVLG + ++ N +IH + AG AAD A S + Sbjct: 45 GIVLGVEKLIQSKMMLPGSN-RRIHSVHRHSGMAVAGLAADGRQIVARAKSEATNYESVY 103 Query: 371 GRKPRVVTAMTXLXQM-----LYRYQGQIGAALVLGGYDHTGPQLFTV 499 G V + LY + G ++LGGYD GPQL+ V Sbjct: 104 GEAVPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMV 151
>PSA4_YEAST (P23638) Proteasome component Y13 (EC 3.4.25.1) (Macropain subunit| Y13) (Proteinase YSCE subunit 13) (Multicatalytic endopeptidase complex subunit Y13) Length = 258 Score = 34.7 bits (78), Expect = 0.14 Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 13/119 (10%) Frame = +2 Query: 179 AGTA-------GIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTE--FTTA 331 AGTA GIVL A+ + T + D + EK++ ++ I AG AD E TA Sbjct: 32 AGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEILINTA 91 Query: 332 LISSNIELHSLGTGRKPRVVTAMTXLXQMLYRYQGQI---GAALVLGGY-DHTGPQLFT 496 I + L + ++ + Y G + G + + GY D G QL+T Sbjct: 92 RIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYT 150
>PSMA_PYRHO (O59219) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 34.7 bits (78), Expect = 0.14 Identities = 34/128 (26%), Positives = 52/128 (40%), Gaps = 5/128 (3%) Frame = +2 Query: 125 KATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGT 304 +A G T VG G+VL + R T ++ ++ EKI I I +G Sbjct: 31 EAVKRGATAVGVKCNE------GVVLAVEKRITSR-LIEPESYEKIFQIDDHIAAASSGI 83 Query: 305 AADTEFTTALISSNIELHSLGTGRKPR---VVTAMTXLXQMLYRYQG--QIGAALVLGGY 469 AD ++H L G +V + L QM +Y G GAAL++ G Sbjct: 84 IADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGV 143 Query: 470 DHTGPQLF 493 + P+L+ Sbjct: 144 NEK-PELY 150
>PSMA2_HALMA (Q5V1D4) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 244 Score = 34.3 bits (77), Expect = 0.19 Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 5/106 (4%) Frame = +2 Query: 191 GIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGT 370 G+V+ AD A P++ + EKIH I + AG AD + +++ L Sbjct: 46 GVVIAADRHA-RSPLIERDSIEKIHEIDSHVGVASAGHVADARQLIDVARRQSQVNRLRY 104 Query: 371 GRKPRVVTAMTXLXQMLYRY-----QGQIGAALVLGGYDHTGPQLF 493 V + + + +Y G AL++ G + P+LF Sbjct: 105 DEPASVESLTKEITDYIQQYTQTGGARPFGVALLVAGIEDGEPRLF 150
>PSB2_DROME (Q9VQE5) Probable proteasome subunit beta type 2 (EC 3.4.25.1)| Length = 210 Score = 33.9 bits (76), Expect = 0.25 Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 4/103 (3%) Frame = +2 Query: 194 IVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGTG 373 ++L +DT + + + KIH +S G DT T IS N+ L+ + G Sbjct: 15 VMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHLYKISHG 74 Query: 374 RKPRVVTAMTXLXQMLYRY---QGQIGAALVLGGYDHT-GPQL 490 +A + L Y + A++L GYD GP L Sbjct: 75 YHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAVEGPDL 117
>PSMA_PYRAB (Q9V122) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 33.9 bits (76), Expect = 0.25 Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 5/128 (3%) Frame = +2 Query: 125 KATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGT 304 +A G T VG + G+VL + R T ++ ++ EKI I I +G Sbjct: 31 EAVKRGATAVGVKCKD------GVVLAVEKRITSR-LIEPESYEKIFQIDDHIAAASSGI 83 Query: 305 AADTEFTTALISSNIELHSLGTGRKPR---VVTAMTXLXQMLYRYQG--QIGAALVLGGY 469 AD ++H L G +V + L QM +Y G GAAL++ G Sbjct: 84 IADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGV 143 Query: 470 DHTGPQLF 493 + P+L+ Sbjct: 144 NDK-PELY 150
>PSA4_SCHPO (Q09682) Probable proteasome subunit alpha type 4 (EC 3.4.25.1)| Length = 248 Score = 33.9 bits (76), Expect = 0.25 Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 7/108 (6%) Frame = +2 Query: 191 GIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGT 370 GIVL A+ + T + +++ EK+++I + C AG AD + + L T Sbjct: 42 GIVLAAEKKVTSKLLEQEESAEKLYHIGDNMLCAVAGLTADANILIN-YARRVGQQYLQT 100 Query: 371 GRK----PRVVTAMTXLXQMLYRYQG--QIGAALVLGGYDH-TGPQLF 493 + ++V + L Q +Y G G + + G+DH G QLF Sbjct: 101 FNEEMPCEQLVRRVCDLKQGYTQYGGLRPFGVSFLYAGWDHIRGYQLF 148
>RGS20_HUMAN (O76081) Regulator of G-protein signaling 20 (RGS20) (Regulator of| Gz-selective protein signaling 1) (Gz-selective GTPase-activating protein) (G(z)GAP) Length = 388 Score = 33.5 bits (75), Expect = 0.32 Identities = 18/54 (33%), Positives = 26/54 (48%) Frame = -2 Query: 195 MPAVPASMLPNRQPTMVVPVEVALGRELLTPAEDEARKLLRPEXEKSKPLEEDA 34 +PA+PA+ L + + + LG L P + LRP +KP EEDA Sbjct: 108 LPALPAARLSRGHEELPGRLSLLLGAALALPGRPSGGRPLRPPHPVAKPREEDA 161
>PSA7_CAEEL (Q95005) Proteasome subunit alpha type 7 (EC 3.4.25.1) (Proteasome| subunit alpha 4) Length = 253 Score = 33.1 bits (74), Expect = 0.42 Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 6/129 (4%) Frame = +2 Query: 125 KATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGT 304 +A G+T VG G IV+G + ++ + D+ KIH I + AG Sbjct: 25 EAVKKGSTAVGV------RGKDCIVIGVEKKSIPA-LQDDRTIRKIHMIDDHVMLAFAGL 77 Query: 305 AADTEFTTALISSNIELHSLGTGRKPRVVTAMTXLXQMLYRY-----QGQIGAALVLGGY 469 +AD + + L V + R+ + G ++++GG+ Sbjct: 78 SADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLIGGF 137 Query: 470 DHTG-PQLF 493 DH G P+LF Sbjct: 138 DHDGTPRLF 146
>PSA2B_ARATH (Q8L4A7) Proteasome subunit alpha type 2-B (EC 3.4.25.1) (20S| proteasome alpha subunit B-2) Length = 235 Score = 32.7 bits (73), Expect = 0.55 Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 6/130 (4%) Frame = +2 Query: 128 ATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTA 307 A +G T +G N G+V+ + + +V + + +KI +++P I +G Sbjct: 28 AVGSGQTSLGIKASN------GVVIATEKKLPS-ILVDEASVQKIQHLTPNIGTVYSGMG 80 Query: 308 ADTEFTTALISSNIELHSLGTGRKPRVVTAM---TXLXQMLYRYQGQI---GAALVLGGY 469 D E + L ++P VT + T + G + G +L++ GY Sbjct: 81 PDFRVLVRKSRKQAEQY-LRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGY 139 Query: 470 DHTGPQLFTV 499 D GPQL+ V Sbjct: 140 DDKGPQLYQV 149
>PSA2A_ARATH (O23708) Proteasome subunit alpha type 2-A (EC 3.4.25.1) (20S| proteasome alpha subunit B) (Proteasome component 3) Length = 235 Score = 32.7 bits (73), Expect = 0.55 Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 6/130 (4%) Frame = +2 Query: 128 ATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTA 307 A +G T +G N G+V+ + + +V + + +KI +++P I +G Sbjct: 28 AVGSGQTSLGIKASN------GVVIATEKKLPS-ILVDEASVQKIQHLTPNIGVVYSGMG 80 Query: 308 ADTEFTTALISSNIELHSLGTGRKPRVVTAM---TXLXQMLYRYQGQI---GAALVLGGY 469 D E + L ++P VT + T + G + G +L++ GY Sbjct: 81 PDFRVLVRKSRKQAEQY-LRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGY 139 Query: 470 DHTGPQLFTV 499 D GPQL+ V Sbjct: 140 DDKGPQLYQV 149
>PSB2_YEAST (P22141) Proteasome component C11 (EC 3.4.25.1) (Macropain subunit| C11) (Proteinase YSCE subunit 11) (Multicatalytic endopeptidase complex subunit C11) Length = 198 Score = 32.3 bits (72), Expect = 0.72 Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 5/107 (4%) Frame = +2 Query: 194 IVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGTG 373 ++L + T G V + +K +SP AG A DT I +NI+L+S+ Sbjct: 13 VILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQANIQLYSIRED 72 Query: 374 RKPRVVTAMTXLXQML---YRYQGQIGAALVLGGYD--HTGPQLFTV 499 + + + Q L R + +++GGYD P+L+ + Sbjct: 73 YELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQI 119
>SORL_HUMAN (Q92673) Sortilin-related receptor precursor (Sorting protein-related| receptor containing LDLR class A repeats) (SorLA) (SorLA-1) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding Length = 2214 Score = 32.0 bits (71), Expect = 0.94 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = -3 Query: 284 GXEGKCNGSFRSSCPLLSDPRSPSYRHQ-GRCQRFRLRCYQ 165 G +GS +CPLL++ + S Q GRC RF C+Q Sbjct: 1440 GYRDCADGSDEEACPLLANVTAASTPTQLGRCDRFEFECHQ 1480
>R1AB_CVH22 (Q05002) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)| [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: p9; p87; p195 (EC 3.4.22.-) (Papain-like proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2; 3C-like proteinase (EC 3.4 Length = 6758 Score = 31.2 bits (69), Expect = 1.6 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = -1 Query: 271 NVMDLFAVLVRYYRTLGRPRIGTKDDASGSG 179 NV D +A LV YY+ +G+ RI T GSG Sbjct: 5253 NVSDAYANLVPYYQLIGKQRITTIQGPPGSG 5283
>ICAL_BOVIN (P20811) Calpastatin (Calpain inhibitor)| Length = 705 Score = 30.8 bits (68), Expect = 2.1 Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = -2 Query: 111 LTPAEDEARKLLRPEXE-KSKPLEEDALVD-MGEDVD 7 L PA D+ K L PE E K KPL E L+D + ED D Sbjct: 329 LKPATDKDGKPLLPEAEEKPKPLSESELIDELSEDFD 365
>VPRT_HTL1C (P14074) Protease (EC 3.4.23.-)| Length = 302 Score = 30.8 bits (68), Expect = 2.1 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = -2 Query: 198 TMPAVPASMLPNRQPTMVVPVEVALGRELLTPAEDEARKLLRP--EXEKSKPLEEDALVD 25 T P +LPN+ PT ++PV P + R +++ + + S P +AL+D Sbjct: 82 TSPPTLQQVLPNQDPTSILPV---------IPLDPARRPVIKAQIDTQTSHPKTIEALLD 132 Query: 24 MGEDVDV 4 G D+ V Sbjct: 133 TGADMTV 139
>ICAL_SHEEP (Q95208) Calpastatin (Calpain inhibitor)| Length = 723 Score = 30.8 bits (68), Expect = 2.1 Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = -2 Query: 111 LTPAEDEARKLLRPEXE-KSKPLEEDALVD-MGEDVD 7 L PA D+ K L PE E K KPL E L+D + ED D Sbjct: 344 LKPATDKDGKPLLPEAEEKPKPLSESELIDELSEDFD 380
>PSMA_SULSO (Q9UXC6) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 241 Score = 30.8 bits (68), Expect = 2.1 Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 6/129 (4%) Frame = +2 Query: 125 KATSTGTTIVGCLFGNIEAGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGT 304 +A G T +G + +V+ ++ R + + D + EK+ I + C AG Sbjct: 31 EAVKKGWTAIGI------KSKSSVVIASEKRKAQSLLDVD-SIEKVFLIDDHVGCSFAGL 83 Query: 305 AADTEFTTALISSNIELHSLGTGRKPRVVTAMTX----LXQMLYRYQG--QIGAALVLGG 466 A+D + NI L +P + +T + QM ++ G G ALV+ G Sbjct: 84 ASDGRVLIDY-ARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAG 142 Query: 467 YDHTGPQLF 493 D + P+LF Sbjct: 143 IDKSVPKLF 151
>IE62_VZVD (P09310) Transcriptional transactivator IE62 (Immediate-early| protein 62) (IE62) Length = 1310 Score = 30.8 bits (68), Expect = 2.1 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Frame = -2 Query: 240 ATIGPSVALVSAPRTMPAVPASMLPNRQPTMVVPVEVALGREL-LTPAEDEARKLLRPEX 64 AT A +S P PA+ P+ QP+ A R L + P +D +L P Sbjct: 634 ATGSSPAARISRGHPSPTTPATQAPDPQPS-------AAARSLSVCPPDD---RLRTPRK 683 Query: 63 EKSKPLEEDALVD 25 KS+P+E +L+D Sbjct: 684 RKSQPVESRSLLD 696
>ICAL_PIG (P12675) Calpastatin (Calpain inhibitor)| Length = 713 Score = 30.4 bits (67), Expect = 2.7 Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = -2 Query: 111 LTPAEDEARKLLRPEXE-KSKPLEEDALVD-MGEDVD 7 L PA D+ K L PE E K KPL E L+D + ED D Sbjct: 344 LKPAMDKDGKPLLPEAEEKPKPLSESELIDELSEDFD 380
>VL96_IRV1 (P22856) L96 protein| Length = 867 Score = 29.6 bits (65), Expect = 4.7 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Frame = -2 Query: 228 PSVALVSAPRTMPAVPASMLPNRQPTMVVPVE-VALGRELLTPAEDEARKLLRPEXEKSK 52 PS+ P +P + S+ P P + PV+ ++ RELL A D+ +R + + Sbjct: 797 PSIVPSLKPSVVPKLTPSIAPKIPPPVFGPVKPLSSTRELLEEA-DKVHPYVREDISQLA 855 Query: 51 PLEEDALVDMG 19 EE LV +G Sbjct: 856 RAEEQILVSLG 866
>PSB1_ARATH (P42742) Proteasome subunit beta type 1 (EC 3.4.25.1) (Proteasome| subunit beta type 6) (20S proteasome beta subunit F-1) (TAS-G39.20) (TAS-F22/FAFP98) (Proteasome component C5) Length = 223 Score = 29.6 bits (65), Expect = 4.7 Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 1/102 (0%) Frame = +2 Query: 179 AGTAGIVLGADTRATEGPIVADKNCEKIHYISPXIRCCGAGTAADTEFTTALISSNIELH 358 AG+ V+ ADTR + G + ++ KIH ++ +G AD + ++ S ++ Sbjct: 22 AGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKVLKSRHLIY 81 Query: 359 SLGTGRKPRVVTAMTXLXQMLY-RYQGQIGAALVLGGYDHTG 481 ++ L LY + A VLGG D G Sbjct: 82 QHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEG 123
>BTBD4_HUMAN (Q86UZ6) BTB/POZ domain-containing protein 4 (Zinc finger protein| 340) Length = 589 Score = 29.6 bits (65), Expect = 4.7 Identities = 18/58 (31%), Positives = 18/58 (31%) Frame = -3 Query: 389 RHGVCDRCRENGARCWMK*AQS*TRYRQPYRHHSSGXEGKCNGSFRSSCPLLSDPRSP 216 RHGVC C G P H G EG F P L DP P Sbjct: 497 RHGVCTDCAGRG-------------MAGPLDHGGGGGEGSPEALFPGDGPYLEDPEDP 541
>TCPQ_MOUSE (P42932) T-complex protein 1 subunit theta (TCP-1-theta)| (CCT-theta) Length = 547 Score = 29.3 bits (64), Expect = 6.1 Identities = 12/40 (30%), Positives = 21/40 (52%) Frame = +2 Query: 251 CEKIHYISPXIRCCGAGTAADTEFTTALISSNIELHSLGT 370 C+K H I P + CC A D + ++L+ ++I G+ Sbjct: 135 CKKAHEILPELVCCSAKNLRDVDEVSSLLRTSIMSKQYGS 174
>SORL_RABIT (Q95209) Sortilin-related receptor precursor (Sorting protein-related| receptor containing LDLR class A repeats) (SorLA) (SorLA-1) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding Length = 2213 Score = 29.3 bits (64), Expect = 6.1 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = -3 Query: 284 GXEGKCNGSFRSSCPLLSDPRSPSYRHQ-GRCQRFRLRCYQ 165 G +GS +CP L + + S Q GRC RF C+Q Sbjct: 1439 GYRDCADGSDEEACPSLPNVTATSSPSQPGRCDRFEFECHQ 1479
>TUB8_SOLTU (P33191) Induced stolen tip protein TUB8 (Fragment)| Length = 211 Score = 29.3 bits (64), Expect = 6.1 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 3/72 (4%) Frame = -2 Query: 243 SATIGPSVALVSAPRTMPAVPASMLPNRQPTMVVPVEVALGRELLTPAEDEARKLLRPEX 64 +A + +V V+AP PA +P PVE A + AE E + PE Sbjct: 100 TAAVAAAVEPVAAPVEEPAAAEEPAAAEEPVAAAPVEEAAAPK----AEPEEAPVSEPEA 155 Query: 63 EKSK---PLEED 37 EK++ P+ E+ Sbjct: 156 EKAEEASPVSEE 167
>BAB1_DROME (Q9W0K7) Protein bric-a-brac 1| Length = 977 Score = 29.3 bits (64), Expect = 6.1 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%) Frame = -2 Query: 240 ATIGPSVALVSAPRTMPAV--PASMLPNRQPTMVV 142 A+I P+++ S PR P+ PA +LPN P+M V Sbjct: 772 ASISPALSSGSGPRHAPSPCGPAGLLPNLPPSMAV 806
>POT14_HUMAN (Q6S5H5) Prostate, ovary, testis expressed protein on chromosome 14| Length = 594 Score = 29.3 bits (64), Expect = 6.1 Identities = 27/105 (25%), Positives = 31/105 (29%), Gaps = 5/105 (4%) Frame = +1 Query: 187 RWHR---PWCRYEGDRGSDSSGQELRKDPLHFPSXPLLWCRYGCRYRVHDCAHFIQHRAP 357 +W R PWCR G +SG S WCR H P Sbjct: 26 KWCRHCFPWCRGSGKSNVGTSGDHDDSAMKTLRSKMGKWCR---------------HCFP 70 Query: 358 FSRH--RSQTPCRDGHDDXXADALPIPRTNWCCSRSGWLRPHGSS 486 + R +S HDD L WCC R G S Sbjct: 71 WCRGSGKSNVGTSGDHDDSAMKTLRSKMGKWCCHCFPCCRGSGKS 115
>RON_MOUSE (Q62190) Macrophage-stimulating protein receptor precursor (EC| 2.7.10.1) (MSP receptor) (p185-Ron) (Stem cell-derived tyrosine kinase) (CDw136 antigen) [Contains: Macrophage-stimulating protein receptor alpha chain; Macrophage-stimulating prote Length = 1378 Score = 28.9 bits (63), Expect = 7.9 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +3 Query: 129 PPRRERPSSAACLVTSKPEPLASSLVP 209 PP + +PS C TSKP PL+ +P Sbjct: 1351 PPEQVQPSPQHCRSTSKPRPLSEPPLP 1377
>MEIS3_HUMAN (Q99687) Homeobox protein Meis3 (Meis1-related protein 2)| Length = 375 Score = 28.9 bits (63), Expect = 7.9 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = -2 Query: 231 GPSVALVSAPRTMPAVPASMLPNRQPTMVVP 139 GP+ AL S P T+PAVP P+R P + P Sbjct: 17 GPA-ALASFPETVPAVPGPYGPHRPPQPLPP 46
>V70K_EPMV (P20129) 70 kDa protein| Length = 649 Score = 28.9 bits (63), Expect = 7.9 Identities = 28/89 (31%), Positives = 39/89 (43%) Frame = +3 Query: 117 LSLKPPRRERPSSAACLVTSKPEPLASSLVPIXXXXXXXXXXXXXXXXXXXFPLXSAAVV 296 LSL P R S++ C + P+P A+S P P +A+ Sbjct: 258 LSLCTPPRPAKSTSPCNNSQLPKPTAASDKP------------------AILPTAAASTQ 299 Query: 297 PVRLPIPSSRLRSFHPTSSSILSAPVANP 383 P L P+SRLR T++S LSAP + P Sbjct: 300 PGLL--PNSRLRR---TATSHLSAPTSPP 323 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,066,049 Number of Sequences: 219361 Number of extensions: 1310323 Number of successful extensions: 4653 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 4378 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4625 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3523384522 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)