ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart08h08 |
|---|---|
| Clone Library Name | barley_pub |
>COGT2_ARATH (Q9SK82) Cytokinin-O-glucosyltransferase 2 (EC 2.4.1.-) (Zeatin| O-glucosyltransferase 2) Length = 489 Score = 58.5 bits (140), Expect = 9e-09 Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 9/132 (6%) Frame = +1 Query: 127 QGHINPMLRLAAALHSRGLAVTILHP--------ETRAPDRRKLPADYRLVTIPDNIP-P 279 QGHINPM+R+A LH+RG VT ++ +R + +R +I D +P Sbjct: 22 QGHINPMMRVAKLLHARGFYVTFVNTVYNHNRFLRSRGSNALDGLPSFRFESIADGLPET 81 Query: 280 ELAASEDIASFVFALNKNCAAPFRDYXXXXXXXXXXXXXXXXXFVVADVDWFAPLSVARE 459 ++ A++DI + + KNC APFR+ +V+D L VA E Sbjct: 82 DMDATQDITALCESTMKNCLAPFRE---LLQRINAGDNVPPVSCIVSDGCMSFTLDVAEE 138 Query: 460 LGVAALALMTTS 495 LGV + TTS Sbjct: 139 LGVPEVLFWTTS 150
>CNGT2_ARATH (Q9FIA0) Cytokinin-N-glucosyltransferase 2 (EC 2.4.1.-)| Length = 450 Score = 56.6 bits (135), Expect = 4e-08 Identities = 37/121 (30%), Positives = 54/121 (44%) Frame = +1 Query: 127 QGHINPMLRLAAALHSRGLAVTILHPETRAPDRRKLPADYRLVTIPDNIPPELAASEDIA 306 QG INPML+LA LH RG ++T++H AP P + + IPD + E + + Sbjct: 18 QGCINPMLQLANILHVRGFSITVIHTRFNAPKASSHPL-FTFLQIPDGL-SETEIQDGVM 75 Query: 307 SFVFALNKNCAAPFRDYXXXXXXXXXXXXXXXXXFVVADVDWFAPLSVARELGVAALALM 486 S + +N N +PFRD ++ D W SV+ L + L L Sbjct: 76 SLLAQINLNAESPFRD--CLRKVLLESKESERVTCLIDDCGWLFTQSVSESLKLPRLVLC 133 Query: 487 T 489 T Sbjct: 134 T 134
>CNGT1_ARATH (Q9FI99) Cytokinin-N-glucosyltransferase 1 (EC 2.4.1.-)| Length = 464 Score = 56.2 bits (134), Expect = 5e-08 Identities = 30/76 (39%), Positives = 41/76 (53%) Frame = +1 Query: 127 QGHINPMLRLAAALHSRGLAVTILHPETRAPDRRKLPADYRLVTIPDNIPPELAASEDIA 306 QG INPML+LA L+SRG ++TI+H AP P + + I D + S D+ Sbjct: 17 QGCINPMLQLAKILYSRGFSITIIHTRFNAPKSSDHPL-FTFLQIRDGLSESQTQSRDLL 75 Query: 307 SFVFALNKNCAAPFRD 354 + LN NC PFR+ Sbjct: 76 LQLTLLNNNCQIPFRE 91
>LGT_CITUN (Q9MB73) Limonoid UDP-glucosyltransferase (EC 2.4.1.210) (Limonoid| glucosyltransferase) (Limonoid GTase) (LGTase) Length = 511 Score = 34.7 bits (78), Expect = 0.14 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +1 Query: 130 GHINPMLRLAAALHSRGLAVTILHPETRAPDRRK 231 GH+NP+LRL L S+G +T+ PE+ RK Sbjct: 18 GHVNPLLRLGRLLASKGFFLTLTTPESFGKQMRK 51
>IAAG_MAIZE (Q41819) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121)| (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) Length = 471 Score = 34.3 bits (77), Expect = 0.19 Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 2/125 (1%) Frame = +1 Query: 127 QGHINPMLRLAAALHSRGLAVTILHPE--TRAPDRRKLPADYRLVTIPDNIPPELAASED 300 QGH+NPM++ A L S+G+A T++ R D PA ++ + A++ Sbjct: 13 QGHMNPMVQFAKRLASKGVATTLVTTRFIQRTADVDAHPAMVEAIS-DGHDEGGFASAAG 71 Query: 301 IASFVFALNKNCAAPFRDYXXXXXXXXXXXXXXXXXFVVADVDWFAPLSVARELGVAALA 480 +A + L K AA + DW P VAR +G+ A+ Sbjct: 72 VAEY---LEKQAAAASASLASLVEARASSADAFTCVVYDSYEDWVLP--VARRMGLPAVP 126 Query: 481 LMTTS 495 T S Sbjct: 127 FSTQS 131
>ISY1_ASPFU (Q4WUJ6) Pre-mRNA-splicing factor isy1| Length = 243 Score = 32.3 bits (72), Expect = 0.71 Identities = 19/54 (35%), Positives = 27/54 (50%) Frame = -2 Query: 318 EDEGRDVLGRGELRRYVVRDGDQAVVRRELPAVRRAGLRVEDGDGEAAGV*RGG 157 +DEGR++ G G+ RY R + V+ A R G R + + E G RGG Sbjct: 102 DDEGREIPGGGKGYRYFGRARELPGVKEMFEAAARRGRRPPEEEEEEEGKGRGG 155
>CZOG_SORBI (Q6JAH0) Putative cis-zeatin O-glucosyltransferase (EC 2.4.1.215)| Length = 466 Score = 31.2 bits (69), Expect = 1.6 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 12/87 (13%) Frame = +1 Query: 127 QGHINPMLRLAAALHSRGLAVTILHPETRAPDRRKL----------PADYRLVTIP--DN 270 QGH+N +L L+ L SRGL+V P R ++ + +P D+ Sbjct: 19 QGHLNQLLHLSLLLASRGLSVHYAAPPPHVRQARARVHGWDPKALGSIEFHDLDVPAYDS 78 Query: 271 IPPELAASEDIASFVFALNKNCAAPFR 351 PP+LAA + + + + AA R Sbjct: 79 PPPDLAAPSPFPNHLMPMFEAFAAAAR 105
>ISY1_EMENI (Q5B423) Pre-mRNA-splicing factor isy1| Length = 256 Score = 30.8 bits (68), Expect = 2.1 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Frame = -2 Query: 318 EDEGRDVLGRGELRRYVVRDGDQAVVRRELPAVRRAG---LRVEDGDGEAAGV*RGG 157 +DEGR++ G G+ RY R + V+ L A R G E+ DG+ G RGG Sbjct: 112 DDEGREIPGGGKGYRYFGRARELPGVKEMLEAAARRGRGPAEEEEDDGKTVG--RGG 166
>SRPG_SYNP7 (Q59966) Cysteine synthase, plasmid (EC 2.5.1.47) (O-acetylserine| sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase) Length = 329 Score = 29.6 bits (65), Expect = 4.6 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = +1 Query: 139 NPMLRLAAALHSRGLAVTILHPETRAPDRRKLPADY 246 N + LA +RG+ +T+ PET + +RRKL A Y Sbjct: 78 NTGIALAFVAAARGIPLTLTMPETMSLERRKLLAAY 113
>RPOB_LACLA (Q9CEN6) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1196 Score = 29.6 bits (65), Expect = 4.6 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = -2 Query: 318 EDEGRDV-LGRGELRRYVVRDGDQAVVRRELPAVRRAGLRVEDGD 187 E E RD LG E+ R + GD+A+ + + R G V+DGD Sbjct: 792 ESETRDTKLGPEEITREIPNVGDEALKNLDESGIIRIGAEVKDGD 836
>TETM_STRLI (Q02652) Tetracycline resistance protein tetM| Length = 639 Score = 29.6 bits (65), Expect = 4.6 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Frame = -2 Query: 363 GQVVPERRRTVLVQREDEGRDVLGRGELRRYVVRDGDQAVVRRELPAVR-RAGLRVED 193 G+V P RRR ++RE +GR G + R V GD + + A+ GLRV D Sbjct: 282 GEVHP-RRRLTFLRRESDGRTTEVSGRVTRLDVVGGDATLTAGNIAALTVPGGLRVGD 338
>UREE_BORPE (Q7VUD4) Urease accessory protein ureE| Length = 205 Score = 28.9 bits (63), Expect = 7.8 Identities = 21/55 (38%), Positives = 24/55 (43%) Frame = -2 Query: 369 GTGQVVPERRRTVLVQREDEGRDVLGRGELRRYVVRDGDQAVVRRELPAVRRAGL 205 G + ERRR+ DEGR LG R +RDGD V V RA L Sbjct: 23 GVTLTLAERRRSRQRLDLDEGRGELGMAIERGQTLRDGDVLVAEDGTYVVVRAAL 77
>UREE_BORPA (Q7W418) Urease accessory protein ureE| Length = 205 Score = 28.9 bits (63), Expect = 7.8 Identities = 21/55 (38%), Positives = 24/55 (43%) Frame = -2 Query: 369 GTGQVVPERRRTVLVQREDEGRDVLGRGELRRYVVRDGDQAVVRRELPAVRRAGL 205 G + ERRR+ DEGR LG R +RDGD V V RA L Sbjct: 23 GVTLTLAERRRSRQRLDLDEGRGELGMAIERGQTLRDGDVLVAEDGTYVVVRAAL 77
>UREE_BORBR (Q7WFF2) Urease accessory protein ureE| Length = 205 Score = 28.9 bits (63), Expect = 7.8 Identities = 21/55 (38%), Positives = 24/55 (43%) Frame = -2 Query: 369 GTGQVVPERRRTVLVQREDEGRDVLGRGELRRYVVRDGDQAVVRRELPAVRRAGL 205 G + ERRR+ DEGR LG R +RDGD V V RA L Sbjct: 23 GVTLTLAERRRSRQRLDLDEGRGELGMAIERGQTLRDGDVLVAEDGTYVVVRAAL 77
>CYSK_MYCTU (P0A534) Cysteine synthase A (EC 2.5.1.47) (O-acetylserine| sulfhydrylase A) (O-acetylserine (Thiol)-lyase A) (CSase A) Length = 310 Score = 28.9 bits (63), Expect = 7.8 Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 4/100 (4%) Frame = +1 Query: 19 LQCIHHTTHSRPNTITMAPSSTNRGXXXXXXXXXXYQGHINPMLRLAAALHSRGLAVTIL 198 LQ +P+TI + P+S N G + LA +RG + Sbjct: 52 LQAAEQAGLIKPDTIILEPTSGNTG------------------IALAMVCAARGYRCVLT 93 Query: 199 HPETRAPDRRKLPADY--RLVTIP--DNIPPELAASEDIA 306 PET + +RR L Y L+ P D + +A +E++A Sbjct: 94 MPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELA 133
>CYSK_MYCBO (P0A535) Cysteine synthase A (EC 2.5.1.47) (O-acetylserine| sulfhydrylase A) (O-acetylserine (Thiol)-lyase A) (CSase A) Length = 310 Score = 28.9 bits (63), Expect = 7.8 Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 4/100 (4%) Frame = +1 Query: 19 LQCIHHTTHSRPNTITMAPSSTNRGXXXXXXXXXXYQGHINPMLRLAAALHSRGLAVTIL 198 LQ +P+TI + P+S N G + LA +RG + Sbjct: 52 LQAAEQAGLIKPDTIILEPTSGNTG------------------IALAMVCAARGYRCVLT 93 Query: 199 HPETRAPDRRKLPADY--RLVTIP--DNIPPELAASEDIA 306 PET + +RR L Y L+ P D + +A +E++A Sbjct: 94 MPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELA 133 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,803,025 Number of Sequences: 219361 Number of extensions: 687896 Number of successful extensions: 2361 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 2291 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2354 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3465624120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
