ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart08h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC146523.2| Oryza sativa (japonica cultivar-group) chromosome... 192 8e-46
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 192 8e-46
3dbj|AK069996.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 8e-46
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 192 8e-46
5ref|NM_185146.1| Oryza sativa (japonica cultivar-group), mRNA 54 4e-04
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 54 4e-04
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
8gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genom... 54 4e-04
9gb|AC145367.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.028
10dbj|AK105931.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.028
11dbj|AK099588.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.028
12ref|XM_450076.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.11
13gb|AF425074.1| Oncorhynchus mykiss SWS1 opsin mRNA, complete cds 46 0.11
14dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
15dbj|AP005744.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
16dbj|AK059022.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
17gb|AY345975.1| Stevia rebaudiana UDP-glycosyltransferase 85A8 mR... 44 0.43
18gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 44 0.43
19gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 44 0.43
20gb|AF512431.1| Saccharothrix mutabilis subsp. capreolus nonribos... 42 1.7
21dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
22gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
23emb|AL831812.5|CNS08CAP Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.7
24ref|XM_463421.1| Oryza sativa (japonica cultivar-group), predic... 40 6.7
25ref|XM_468692.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.7
26gb|AY765463.1| Arabidopsis thaliana UDP-glucuronosyltransferase ... 40 6.7
27gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genom... 40 6.7
28gb|DQ148458.1| Phalaenopsis hybrid cultivar flavonoid 3'5'-hydro... 40 6.7
29gb|AY328909.1| Oryza sativa (japonica cultivar-group) BRITTLE CU... 40 6.7
30emb|CR377229.8| Zebrafish DNA sequence from clone CH211-273M23 i... 40 6.7
31emb|AL671969.39| Mouse DNA sequence from clone RP23-339O7 on chr... 40 6.7
32dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 40 6.7
33gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 6.7
34dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
35gb|AF546139.1|AF546140S2 Amycolatopsis orientalis PksE (pksE) an... 40 6.7
36gb|AC068562.4|T16E15 Sequence of BAC T16E15 from Arabidopsis tha... 40 6.7
37dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
38emb|BX247902.6| Zebrafish DNA sequence from clone CH211-231D21 i... 40 6.7
39dbj|AK071819.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
40gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.7
41gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.7 
>gb|AC146523.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0045D11 map near 50283S, complete sequence
          Length = 148306

 Score =  192 bits (97), Expect = 8e-46
 Identities = 217/257 (84%)
 Strand = Plus / Minus

                                                                         
Query: 94    cgccgccgcgtggtcctcctaccgctgccataccaaggccacatcaaccccatgctacgc 153
             |||||||||||| | || || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 71120 cgccgccgcgtgctgctgctcccgctgccataccacggccacatcaaccccatgctccgc 71061

                                                                         
Query: 154   ctggccgccgcgctacactcccgcggcctcgccgtcaccatcctccacccggagacccgc 213
             || ||||||||||| |||  ||||||||||||||||||| || ||||| ||||||| |||
Sbjct: 71060 ctcgccgccgcgctgcacgaccgcggcctcgccgtcaccgtcgtccacacggagacgcgc 71001

                                                                         
Query: 214   gcgccggaccgccggaagctcccggcggactaccgcctggtcaccatcccggacaacata 273
             ||||| ||||||||||  ||||| || |  | |   ||||| ||| | ||||||  | | 
Sbjct: 71000 gcgcccgaccgccggagcctccccgccgggtgcgagctggtgaccgtgccggacggcctc 70941

                                                                         
Query: 274   ccgccggagctcgccgcgtccgaggacatcgcgtccttcgtcttcgcgctgaacaagaac 333
             ||||||||||| ||||||||||  |||||| |||| ||||| ||||||||||||| ||||
Sbjct: 70940 ccgccggagctggccgcgtccggcgacatcccgtcgttcgtgttcgcgctgaacaggaac 70881

                              
Query: 334   tgtgcggcgccgttccg 350
             || ||||||||||||||
Sbjct: 70880 tgcgcggcgccgttccg 70864



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                         
Query: 415   gtcgccgacgtcgactggttcgcgccgctctccgtcgccagggagctgggcgtggccgcg 474
             |||||||||||||||||||||||||||||| |||  || |||||||| |||||| | |||
Sbjct: 70796 gtcgccgacgtcgactggttcgcgccgctcgccgcggcgagggagctcggcgtgccggcg 70737

                                   
Query: 475   ctggctctcatgaccaccagcg 496
             ||||| || ||||||| |||||
Sbjct: 70736 ctggcgctgatgaccagcagcg 70715
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  192 bits (97), Expect = 8e-46
 Identities = 217/257 (84%)
 Strand = Plus / Minus

                                                                            
Query: 94       cgccgccgcgtggtcctcctaccgctgccataccaaggccacatcaaccccatgctacgc 153
                |||||||||||| | || || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 13938283 cgccgccgcgtgctgctgctcccgctgccataccacggccacatcaaccccatgctccgc 13938224

                                                                            
Query: 154      ctggccgccgcgctacactcccgcggcctcgccgtcaccatcctccacccggagacccgc 213
                || ||||||||||| |||  ||||||||||||||||||| || ||||| ||||||| |||
Sbjct: 13938223 ctcgccgccgcgctgcacgaccgcggcctcgccgtcaccgtcgtccacacggagacgcgc 13938164

                                                                            
Query: 214      gcgccggaccgccggaagctcccggcggactaccgcctggtcaccatcccggacaacata 273
                ||||| ||||||||||  ||||| || |  | |   ||||| ||| | ||||||  | | 
Sbjct: 13938163 gcgcccgaccgccggagcctccccgccgggtgcgagctggtgaccgtgccggacggcctc 13938104

                                                                            
Query: 274      ccgccggagctcgccgcgtccgaggacatcgcgtccttcgtcttcgcgctgaacaagaac 333
                ||||||||||| ||||||||||  |||||| |||| ||||| ||||||||||||| ||||
Sbjct: 13938103 ccgccggagctggccgcgtccggcgacatcccgtcgttcgtgttcgcgctgaacaggaac 13938044

                                 
Query: 334      tgtgcggcgccgttccg 350
                || ||||||||||||||
Sbjct: 13938043 tgcgcggcgccgttccg 13938027



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                            
Query: 415      gtcgccgacgtcgactggttcgcgccgctctccgtcgccagggagctgggcgtggccgcg 474
                |||||||||||||||||||||||||||||| |||  || |||||||| |||||| | |||
Sbjct: 13937959 gtcgccgacgtcgactggttcgcgccgctcgccgcggcgagggagctcggcgtgccggcg 13937900

                                      
Query: 475      ctggctctcatgaccaccagcg 496
                ||||| || ||||||| |||||
Sbjct: 13937899 ctggcgctgatgaccagcagcg 13937878



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 84/104 (80%)
 Strand = Plus / Minus

                                                                            
Query: 98       gccgcgtggtcctcctaccgctgccataccaaggccacatcaaccccatgctacgcctgg 157
                |||||||||||||| | ||| |||| ||||  ||||||| || ||||||| | | ||| |
Sbjct: 14097363 gccgcgtggtcctcttcccgatgccgtacccgggccacaccatccccatgttccacctcg 14097304

                                                            
Query: 158      ccgccgcgctacactcccgcggcctcgccgtcaccatcctccac 201
                |||||| ||| | |||||| ||| || || ||||| ||||||||
Sbjct: 14097303 ccgccgtgctccgctcccgtggcttctccatcaccgtcctccac 14097260
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>dbj|AK069996.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040B08, full
           insert sequence
          Length = 1502

 Score =  192 bits (97), Expect = 8e-46
 Identities = 217/257 (84%)
 Strand = Plus / Plus

                                                                       
Query: 94  cgccgccgcgtggtcctcctaccgctgccataccaaggccacatcaaccccatgctacgc 153
           |||||||||||| | || || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 49  cgccgccgcgtgctgctgctcccgctgccataccacggccacatcaaccccatgctccgc 108

                                                                       
Query: 154 ctggccgccgcgctacactcccgcggcctcgccgtcaccatcctccacccggagacccgc 213
           || ||||||||||| |||  ||||||||||||||||||| || ||||| ||||||| |||
Sbjct: 109 ctcgccgccgcgctgcacgaccgcggcctcgccgtcaccgtcgtccacacggagacgcgc 168

                                                                       
Query: 214 gcgccggaccgccggaagctcccggcggactaccgcctggtcaccatcccggacaacata 273
           ||||| ||||||||||  ||||| || |  | |   ||||| ||| | ||||||  | | 
Sbjct: 169 gcgcccgaccgccggagcctccccgccgggtgcgagctggtgaccgtgccggacggcctc 228

                                                                       
Query: 274 ccgccggagctcgccgcgtccgaggacatcgcgtccttcgtcttcgcgctgaacaagaac 333
           ||||||||||| ||||||||||  |||||| |||| ||||| ||||||||||||| ||||
Sbjct: 229 ccgccggagctggccgcgtccggcgacatcccgtcgttcgtgttcgcgctgaacaggaac 288

                            
Query: 334 tgtgcggcgccgttccg 350
           || ||||||||||||||
Sbjct: 289 tgcgcggcgccgttccg 305



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                       
Query: 415 gtcgccgacgtcgactggttcgcgccgctctccgtcgccagggagctgggcgtggccgcg 474
           |||||||||||||||||||||||||||||| |||  || |||||||| |||||| | |||
Sbjct: 373 gtcgccgacgtcgactggttcgcgccgctcgccgcggcgagggagctcggcgtgccggcg 432

                                 
Query: 475 ctggctctcatgaccaccagcg 496
           ||||| || ||||||| |||||
Sbjct: 433 ctggcgctgatgaccagcagcg 454
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  192 bits (97), Expect = 8e-46
 Identities = 217/257 (84%)
 Strand = Plus / Minus

                                                                            
Query: 94       cgccgccgcgtggtcctcctaccgctgccataccaaggccacatcaaccccatgctacgc 153
                |||||||||||| | || || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 14020285 cgccgccgcgtgctgctgctcccgctgccataccacggccacatcaaccccatgctccgc 14020226

                                                                            
Query: 154      ctggccgccgcgctacactcccgcggcctcgccgtcaccatcctccacccggagacccgc 213
                || ||||||||||| |||  ||||||||||||||||||| || ||||| ||||||| |||
Sbjct: 14020225 ctcgccgccgcgctgcacgaccgcggcctcgccgtcaccgtcgtccacacggagacgcgc 14020166

                                                                            
Query: 214      gcgccggaccgccggaagctcccggcggactaccgcctggtcaccatcccggacaacata 273
                ||||| ||||||||||  ||||| || |  | |   ||||| ||| | ||||||  | | 
Sbjct: 14020165 gcgcccgaccgccggagcctccccgccgggtgcgagctggtgaccgtgccggacggcctc 14020106

                                                                            
Query: 274      ccgccggagctcgccgcgtccgaggacatcgcgtccttcgtcttcgcgctgaacaagaac 333
                ||||||||||| ||||||||||  |||||| |||| ||||| ||||||||||||| ||||
Sbjct: 14020105 ccgccggagctggccgcgtccggcgacatcccgtcgttcgtgttcgcgctgaacaggaac 14020046

                                 
Query: 334      tgtgcggcgccgttccg 350
                || ||||||||||||||
Sbjct: 14020045 tgcgcggcgccgttccg 14020029



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                            
Query: 415      gtcgccgacgtcgactggttcgcgccgctctccgtcgccagggagctgggcgtggccgcg 474
                |||||||||||||||||||||||||||||| |||  || |||||||| |||||| | |||
Sbjct: 14019961 gtcgccgacgtcgactggttcgcgccgctcgccgcggcgagggagctcggcgtgccggcg 14019902

                                      
Query: 475      ctggctctcatgaccaccagcg 496
                ||||| || ||||||| |||||
Sbjct: 14019901 ctggcgctgatgaccagcagcg 14019880



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 84/104 (80%)
 Strand = Plus / Minus

                                                                            
Query: 98       gccgcgtggtcctcctaccgctgccataccaaggccacatcaaccccatgctacgcctgg 157
                |||||||||||||| | ||| |||| ||||  ||||||| || ||||||| | | ||| |
Sbjct: 14179365 gccgcgtggtcctcttcccgatgccgtacccgggccacaccatccccatgttccacctcg 14179306

                                                            
Query: 158      ccgccgcgctacactcccgcggcctcgccgtcaccatcctccac 201
                |||||| ||| | |||||| ||| || || ||||| ||||||||
Sbjct: 14179305 ccgccgtgctccgctcccgtggcttctccatcaccgtcctccac 14179262
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>ref|NM_185146.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1413

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                       
Query: 115 ccgctgccataccaaggccacatcaaccccatgctacgcctggccgccgcgctacactcc 174
           ||||| || ||||| |||||||||||||||||||| || || |||| ||  || | | ||
Sbjct: 85  ccgctcccgtaccagggccacatcaaccccatgctccggctcgccggcgtcctccgcgcc 144

                                      
Query: 175 cgcggcctcgccgtcaccatcctccac 201
           |||||| ||||||||||| || |||||
Sbjct: 145 cgcggcttcgccgtcaccgtcttccac 171
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                            
Query: 115      ccgctgccataccaaggccacatcaaccccatgctacgcctggccgccgcgctacactcc 174
                ||||| || ||||| |||||||||||||||||||| || || |||| ||  || | | ||
Sbjct: 34333140 ccgctcccgtaccagggccacatcaaccccatgctccggctcgccggcgtcctccgcgcc 34333199

                                           
Query: 175      cgcggcctcgccgtcaccatcctccac 201
                |||||| ||||||||||| || |||||
Sbjct: 34333200 cgcggcttcgccgtcaccgtcttccac 34333226



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 173      cccgcggcctcgccgtcacc 192
                ||||||||||||||||||||
Sbjct: 17071216 cccgcggcctcgccgtcacc 17071197
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                            
Query: 115      ccgctgccataccaaggccacatcaaccccatgctacgcctggccgccgcgctacactcc 174
                ||||| || ||||| |||||||||||||||||||| || || |||| ||  || | | ||
Sbjct: 34423612 ccgctcccgtaccagggccacatcaaccccatgctccggctcgccggcgtcctccgcgcc 34423671

                                           
Query: 175      cgcggcctcgccgtcaccatcctccac 201
                |||||| ||||||||||| || |||||
Sbjct: 34423672 cgcggcttcgccgtcaccgtcttccac 34423698



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 173      cccgcggcctcgccgtcacc 192
                ||||||||||||||||||||
Sbjct: 17064785 cccgcggcctcgccgtcacc 17064766
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>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence,
            complete sequence
          Length = 143205

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                        
Query: 115  ccgctgccataccaaggccacatcaaccccatgctacgcctggccgccgcgctacactcc 174
            ||||| || ||||| |||||||||||||||||||| || || |||| ||  || | | ||
Sbjct: 1858 ccgctcccgtaccagggccacatcaaccccatgctccggctcgccggcgtcctccgcgcc 1799

                                       
Query: 175  cgcggcctcgccgtcaccatcctccac 201
            |||||| ||||||||||| || |||||
Sbjct: 1798 cgcggcttcgccgtcaccgtcttccac 1772
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>gb|AC145367.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0064J09 map near 50283S, complete sequence
          Length = 111122

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 84/104 (80%)
 Strand = Plus / Minus

                                                                         
Query: 98    gccgcgtggtcctcctaccgctgccataccaaggccacatcaaccccatgctacgcctgg 157
             |||||||||||||| | ||| |||| ||||  ||||||| || ||||||| | | ||| |
Sbjct: 85771 gccgcgtggtcctcttcccgatgccgtacccgggccacaccatccccatgttccacctcg 85712

                                                         
Query: 158   ccgccgcgctacactcccgcggcctcgccgtcaccatcctccac 201
             |||||| ||| | |||||| ||| || || ||||| ||||||||
Sbjct: 85711 ccgccgtgctccgctcccgtggcttctccatcaccgtcctccac 85668
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>dbj|AK105931.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B02, full
           insert sequence
          Length = 1509

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                       
Query: 98  gccgcgtggtcctcctaccgctgccataccaaggccacatcaaccccatgctacgcctgg 157
           |||||||||||||| | ||| |||| ||||  ||||||| || ||||||| | | ||| |
Sbjct: 21  gccgcgtggtcctcttcccgatgccgtacccgggccacaccatccccatgttccacctcg 80

                                                       
Query: 158 ccgccgcgctacactcccgcggcctcgccgtcaccatcctccac 201
           |||||| ||| | |||||| ||| || || ||||| ||||||||
Sbjct: 81  ccgccgtgctccgctcccgtggcttctccatcaccgtcctccac 124
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>dbj|AK099588.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043F17, full
           insert sequence
          Length = 1534

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                       
Query: 98  gccgcgtggtcctcctaccgctgccataccaaggccacatcaaccccatgctacgcctgg 157
           |||||||||||||| | ||| |||| ||||  ||||||| || ||||||| | | ||| |
Sbjct: 35  gccgcgtggtcctcttcccgatgccgtacccgggccacaccatccccatgttccacctcg 94

                                                       
Query: 158 ccgccgcgctacactcccgcggcctcgccgtcaccatcctccac 201
           |||||| ||| | |||||| ||| || || ||||| ||||||||
Sbjct: 95  ccgccgtgctccgctcccgtggcttctccatcaccgtcctccac 138
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>ref|XM_450076.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1579

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 127 caaggccacatcaaccccatgct 149
           |||||||||||||||||||||||
Sbjct: 80  caaggccacatcaaccccatgct 102
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>gb|AF425074.1| Oncorhynchus mykiss SWS1 opsin mRNA, complete cds
          Length = 1293

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 241 gactaccgcctggtcaccatccc 263
           |||||||||||||||||||||||
Sbjct: 878 gactaccgcctggtcaccatccc 900
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 127     caaggccacatcaaccccatgct 149
               |||||||||||||||||||||||
Sbjct: 1451989 caaggccacatcaaccccatgct 1451967
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>dbj|AP005744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1512_E04
          Length = 157848

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 127   caaggccacatcaaccccatgct 149
             |||||||||||||||||||||||
Sbjct: 70102 caaggccacatcaaccccatgct 70080
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>dbj|AK059022.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B05, full
           insert sequence
          Length = 1579

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 127 caaggccacatcaaccccatgct 149
           |||||||||||||||||||||||
Sbjct: 80  caaggccacatcaaccccatgct 102
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>gb|AY345975.1| Stevia rebaudiana UDP-glycosyltransferase 85A8 mRNA, complete cds
          Length = 1598

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 126 ccaaggccacatcaaccccatg 147
           ||||||||||||||||||||||
Sbjct: 57  ccaaggccacatcaaccccatg 78
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 63      caccatggcgccgagcagcacc 84
               ||||||||||||||||||||||
Sbjct: 1685073 caccatggcgccgagcagcacc 1685094
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 246     ccgcctggtcaccatcccggac 267
               ||||||||||||||||||||||
Sbjct: 2080370 ccgcctggtcaccatcccggac 2080349
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>gb|AF512431.1| Saccharothrix mutabilis subsp. capreolus nonribosomal peptide
             synthetase gene cluster, partial sequence
          Length = 28890

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 342   gccgttccgggactacctggc 362
             |||||||||||||||||||||
Sbjct: 20259 gccgttccgggactacctggc 20279



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   gccgttccgggactacctgg 361
             ||||||||||||||||||||
Sbjct: 13174 gccgttccgggactacctgg 13193
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 403      ctcgccttcgttgtcgccgac 423
                |||||||||||||||||||||
Sbjct: 16470118 ctcgccttcgttgtcgccgac 16470098
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 403      ctcgccttcgttgtcgccgac 423
                |||||||||||||||||||||
Sbjct: 16423351 ctcgccttcgttgtcgccgac 16423331
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>emb|AL831812.5|CNS08CAP Oryza sativa chromosome 12, . BAC OSJNBa0054H15 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 155947

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 403    ctcgccttcgttgtcgccgac 423
              |||||||||||||||||||||
Sbjct: 103672 ctcgccttcgttgtcgccgac 103692
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>ref|XM_463421.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1455

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 cccgcggcctcgccgtcacc 192
           ||||||||||||||||||||
Sbjct: 113 cccgcggcctcgccgtcacc 132
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>ref|XM_468692.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 459

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 cccgcggcctcgccgtcacc 192
           ||||||||||||||||||||
Sbjct: 155 cccgcggcctcgccgtcacc 174
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>gb|AY765463.1| Arabidopsis thaliana UDP-glucuronosyltransferase (UGT5) mRNA,
           complete cds
          Length = 1293

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 127 caaggccacatcaaccccatgcta 150
           ||||||||||||||||| ||||||
Sbjct: 64  caaggccacatcaacccgatgcta 87
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>gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genomic sequence, complete
              sequence
          Length = 157662

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 173    cccgcggcctcgccgtcacc 192
              ||||||||||||||||||||
Sbjct: 101962 cccgcggcctcgccgtcacc 101943
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>gb|DQ148458.1| Phalaenopsis hybrid cultivar flavonoid 3'5'-hydroxylase mRNA,
            complete cds
          Length = 1818

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 174  ccgcggcctcgccgtcacca 193
            ||||||||||||||||||||
Sbjct: 1698 ccgcggcctcgccgtcacca 1679
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>gb|AY328909.1| Oryza sativa (japonica cultivar-group) BRITTLE CULM1 (BC1) gene,
           complete cds
          Length = 4498

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 173 cccgcggcctcgccgtcacc 192
           ||||||||||||||||||||
Sbjct: 787 cccgcggcctcgccgtcacc 768
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>emb|CR377229.8| Zebrafish DNA sequence from clone CH211-273M23 in linkage group 17,
             complete sequence
          Length = 142019

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     aacaaagttttcctcctctg 21
             ||||||||||||||||||||
Sbjct: 93387 aacaaagttttcctcctctg 93368
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>emb|AL671969.39| Mouse DNA sequence from clone RP23-339O7 on chromosome 11 Contains part
             of a novel gene and the Nmu2r gene for neuromedin U
             receptor 2, complete sequence
          Length = 118473

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aaacaaagttttcctcctct 20
             ||||||||||||||||||||
Sbjct: 63514 aaacaaagttttcctcctct 63495
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>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 35      acacaacgcactcacggcct 54
               ||||||||||||||||||||
Sbjct: 1946745 acacaacgcactcacggcct 1946764
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 177     cggcctcgccgtcaccatcc 196
               ||||||||||||||||||||
Sbjct: 4006069 cggcctcgccgtcaccatcc 4006088
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 173      cccgcggcctcgccgtcacc 192
                ||||||||||||||||||||
Sbjct: 28842804 cccgcggcctcgccgtcacc 28842785
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>gb|AF546139.1|AF546140S2 Amycolatopsis orientalis PksE (pksE) and TebC (tebC) genes, complete
            cds
          Length = 6262

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 418  gccgacgtcgactggttcgcgccg 441
            ||||| ||||||||||||||||||
Sbjct: 4906 gccgaggtcgactggttcgcgccg 4929
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>gb|AC068562.4|T16E15 Sequence of BAC T16E15 from Arabidopsis thaliana chromosome 1,
            complete sequence
          Length = 40951

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 127  caaggccacatcaaccccatgcta 150
            ||||||||||||||||| ||||||
Sbjct: 6600 caaggccacatcaacccgatgcta 6623
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>dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1116_H09
          Length = 110086

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   cccgcggcctcgccgtcacc 192
             ||||||||||||||||||||
Sbjct: 60847 cccgcggcctcgccgtcacc 60828
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>emb|BX247902.6| Zebrafish DNA sequence from clone CH211-231D21 in linkage group 8,
             complete sequence
          Length = 160910

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     aacaaagttttcctcctctg 21
             ||||||||||||||||||||
Sbjct: 48095 aacaaagttttcctcctctg 48076
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>dbj|AK071819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114N14, full
           insert sequence
          Length = 1727

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 cccgcggcctcgccgtcacc 192
           ||||||||||||||||||||
Sbjct: 174 cccgcggcctcgccgtcacc 193
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 301     atcgcgtccttcgtcttcgc 320
               ||||||||||||||||||||
Sbjct: 1396231 atcgcgtccttcgtcttcgc 1396212
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 65      ccatggcgccgagcagcacc 84
               ||||||||||||||||||||
Sbjct: 2863875 ccatggcgccgagcagcacc 2863894


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,948,363
Number of Sequences: 3902068
Number of extensions: 2948363
Number of successful extensions: 64354
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63330
Number of HSP's gapped (non-prelim): 1020
length of query: 496
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 474
effective length of database: 17,147,199,772
effective search space: 8127772691928
effective search space used: 8127772691928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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