>RHM1_ARATH (Q9SYM5) Probable rhamnose biosynthetic enzyme 1 (EC 4.2.1.-) (EC|
           1.1.1.-)
          Length = 669

 Score =  244 bits (624), Expect = 8e-65
 Identities = 114/152 (75%), Positives = 130/152 (85%), Gaps = 1/152 (0%)
 Frame = +1

Query: 67  TNGS-SPPALKFLIYGRTGWIGGLLGKLCTAQGIPFAYGAGRLENRAQLEADIDEVAPTH 243
           +NG+   P+LKFLIYG+TGWIGGLLGK+C  QGI + YG GRLE+R+ L  DI  V PTH
Sbjct: 376 SNGTPQKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRSSLLQDIQSVKPTH 435

Query: 244 VFNAAGVTGRPNVDWCETHRVETIRANVCGTLTLADVCRARGLVLINYATGCIFEYDAXH 423
           VFN+AGVTGRPNVDWCE+H+ ETIRANV GTLTLADVCR  GL+++N+ATGCIFEYD  H
Sbjct: 436 VFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMMNFATGCIFEYDDKH 495

Query: 424 PLGSGVGFKEEDTPNFVGSFYSKTKAMVEELL 519
           P GSG+GFKEEDTPNF GSFYSKTKAMVEELL
Sbjct: 496 PEGSGIGFKEEDTPNFTGSFYSKTKAMVEELL 527

>RHM3_ARATH (Q9LH76) Probable rhamnose biosynthetic enzyme 3 (EC 4.2.1.-) (EC|
           1.1.1.-)
          Length = 664

 Score =  241 bits (615), Expect = 9e-64
 Identities = 110/144 (76%), Positives = 125/144 (86%)
 Frame = +1

Query: 88  ALKFLIYGRTGWIGGLLGKLCTAQGIPFAYGAGRLENRAQLEADIDEVAPTHVFNAAGVT 267
           +LKFLIYG+TGW+GGLLGKLC  QGIP+ YG GRLE+RA L ADI  + P+HVFNAAG+T
Sbjct: 379 SLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIADIRSIKPSHVFNAAGLT 438

Query: 268 GRPNVDWCETHRVETIRANVCGTLTLADVCRARGLVLINYATGCIFEYDAXHPLGSGVGF 447
           GRPNVDWCE+H+ ETIR NV GTLTLADVCR   L+++N+ATGCIFEYDA HP GSG+GF
Sbjct: 439 GRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDAAHPEGSGIGF 498

Query: 448 KEEDTPNFVGSFYSKTKAMVEELL 519
           KEED PNF GSFYSKTKAMVEELL
Sbjct: 499 KEEDKPNFTGSFYSKTKAMVEELL 522

>RHM2_ARATH (Q9LPG6) Probable rhamnose biosynthetic enzyme 2 (EC 4.2.1.-) (EC|
           1.1.1.-) (RHAMNOSE BIOSYNTHESIS 2 protein) (NDP-rhamnose
           synthase) (MUCILAGE-MODIFIED4 protein) (UDP-L-rhamnose
           synthase MUM4)
          Length = 667

 Score =  239 bits (610), Expect = 3e-63
 Identities = 113/152 (74%), Positives = 127/152 (83%), Gaps = 2/152 (1%)
 Frame = +1

Query: 70  NGSS--PPALKFLIYGRTGWIGGLLGKLCTAQGIPFAYGAGRLENRAQLEADIDEVAPTH 243
           NG S    +LKFLIYG+TGW+GGLLGKLC  QGI + YG GRLE+RA L ADI  + PTH
Sbjct: 374 NGDSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRASLVADIRSIKPTH 433

Query: 244 VFNAAGVTGRPNVDWCETHRVETIRANVCGTLTLADVCRARGLVLINYATGCIFEYDAXH 423
           VFNAAG+TGRPNVDWCE+H+ ETIR NV GTLTLADVCR   L+++N+ATGCIFEYDA H
Sbjct: 434 VFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDATH 493

Query: 424 PLGSGVGFKEEDTPNFVGSFYSKTKAMVEELL 519
           P GSG+GFKEED PNF GSFYSKTKAMVEELL
Sbjct: 494 PEGSGIGFKEEDKPNFFGSFYSKTKAMVEELL 525

>ARLY_HELHP (Q7VFF8) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)|
           (ASAL)
          Length = 472

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +1

Query: 85  PALKFLIYGRTGWI-GGLLGKLCTAQGIPFAYGAGRLENR 201
           P +  L+ G++G + G L+G LC  +G+PFAY     E++
Sbjct: 286 PDVPELLRGKSGRVYGELMGLLCVMKGLPFAYNKDTQEDK 325

>JPH1_MOUSE (Q9ET80) Junctophilin-1 (Junctophilin type 1) (JP-1)|
          Length = 660

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -2

Query: 458 SSSLNPTPEPSGWXASYSKMQPVA*LMSTRPRARQTSASV 339
           SS+L P P P+ W    S  +PVA    T P+A+++  ++
Sbjct: 576 SSALVPRPSPNKWGPPKSVTKPVAKESKTEPKAKKSELAI 615

>REPS2_MOUSE (Q80XA6) RalBP1-associated Eps domain-containing protein 2|
           (RalBP1-interacting protein 2) (Partner of RalBP1)
          Length = 521

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 15  PPFPLPSRISPFRHGDLHQRLLAAGAQVPHLRPHRLD 125
           PP P P++  P    DLH +L  A +Q     P ++D
Sbjct: 380 PPRPCPTQSEPVSEADLHSQLNRAPSQAAESSPTKMD 416

>Y219_HAEIN (P44577) Hypothetical protein HI0219|
          Length = 213

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +1

Query: 52  AMAISTNGSSPPALKFLIYGRTGWIGGLLGKLCT-AQGIPFAYGAGRL 192
           A  + T G S   L FLI     W+  L G L T A G P+  G GRL
Sbjct: 139 AGGLLTFGMSIVTLSFLITTPEAWVPNLGGDLPTPAYGFPYLSGVGRL 186

>ARLY_OCEIH (Q8ELT9) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)|
           (ASAL)
          Length = 459

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +1

Query: 85  PALKFLIYGRTGWI-GGLLGKLCTAQGIPFAYGAGRLENR 201
           P +  L+ G+TG + G L+G L T +G+P AY     E++
Sbjct: 285 PDVAELVRGKTGRVYGHLMGMLTTLKGLPLAYNKDMQEDK 324

>ERYA1_SACER (Q03131) Erythronolide synthase, modules 1 and 2 (EC 2.3.1.94) (ORF|
            1) (6-deoxyerythronolide B synthase I) (DEBS 1)
          Length = 3491

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 38/138 (27%), Positives = 53/138 (38%), Gaps = 35/138 (25%)
 Frame = +1

Query: 52   AMAISTNGSSPPALKFLIYGRTGWIGGLLGKLCTAQGIPF----------AYGAGRLENR 201
            A A +T+    P    L+ G TG +GG + +    +G P           A GAG L   
Sbjct: 1600 AAAPATDDEWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELV-- 1657

Query: 202  AQLEA----------DI--------------DEVAPTHVFNAAGVTGRPNVDWCETHRVE 309
            A+LEA          D+              D+V  + VF+AA       VD     R+E
Sbjct: 1658 AELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIE 1717

Query: 310  -TIRANVCGTLTLADVCR 360
               RA V G   L ++ R
Sbjct: 1718 RASRAKVLGARNLHELTR 1735

>AT10A_MOUSE (O54827) Probable phospholipid-transporting ATPase VA (EC 3.6.3.1)|
           (P-locus fat-associated ATPase)
          Length = 1508

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
 Frame = +1

Query: 91  LKFLIYGRTGWI--GGLLGKLCTAQGIPFAYGAGRLENRAQLEADIDE---VAPTHVFNA 255
           +K++   +TG +    ++ + CT  GI +++ A         EAD +E   V+     + 
Sbjct: 425 IKYIFSDKTGTLTENKMVFRRCTVSGIEYSHDANAQRLARYQEADSEEEEVVSKVGTISH 484

Query: 256 AGVTGRPNVDWCETHRVETIRAN 324
            G TG     W  TH+ ++I+++
Sbjct: 485 RGSTGSHQSIWM-THKTQSIKSH 506

>ISPE_GLOVI (Q7NPF3) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC|
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 302

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 33  SRISPFRHGDLHQRLLAAGAQVPHLRPHRLDRGS 134
           +RI+P  H DL + +L A  QV  LR H +  G+
Sbjct: 212 ARIAPLLHNDLERAVLPAYPQVSALREHLVSAGA 245

>SYI_COLP3 (Q486U0) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 953

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +1

Query: 382 NYATGCIFEYDAXHPLGSGVGFKEEDTPNFVGSFYSKTKAMVEELL 519
           ++  G +++ +  +P+G+  G   EDTP   G    K  A V ELL
Sbjct: 348 DFVVGKLYDLEVANPVGAN-GVYLEDTPLLAGQHVFKANASVVELL 392

>ARLY_LACPL (P59617) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)|
           (ASAL)
          Length = 467

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
 Frame = +1

Query: 85  PALKFLIYGRTGWI-GGLLGKLCTAQGIPFAYGAGRLENRAQLEADIDEVAPT----HVF 249
           P +  LI G++G + G L+G L   +GIP AY     E++   E   D V       HVF
Sbjct: 288 PDMAELIRGKSGRVYGNLMGLLTVMKGIPLAYNKDLQEDK---EGAFDTVTTVLTSLHVF 344

Query: 250 NAAGVTGRPNVD 285
                T   N D
Sbjct: 345 TGMLATLTVNED 356

>LOLB_NEIMB (P57024) Outer-membrane lipoprotein lolB precursor|
          Length = 193

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
 Frame = +1

Query: 253 AAGVTGRPNVDWCETHRVETIRANVCGTLTLADVCRARGLVLINYATGCIFEYDAXHPLG 432
           A G     N DW     VETI  N     TL  +C+ R   L     G +++ ++   L 
Sbjct: 46  AEGKGSYANFDWTYQPPVETININTPLGSTLGQLCQDRDGALAVDGKGNVYQAESAEELS 105

Query: 433 SG-VGFK 450
              VGFK
Sbjct: 106 RQLVGFK 112

>LOLB_NEIMA (P57023) Outer-membrane lipoprotein lolB precursor|
          Length = 193

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
 Frame = +1

Query: 253 AAGVTGRPNVDWCETHRVETIRANVCGTLTLADVCRARGLVLINYATGCIFEYDAXHPLG 432
           A G     N DW     VETI  N     TL  +C+ R   L     G +++ ++   L 
Sbjct: 46  AEGKGSYANFDWTYQPPVETININTPLGSTLGQLCQDRDGALAVDGKGNVYQAESAEELS 105

Query: 433 SG-VGFK 450
              VGFK
Sbjct: 106 RQLVGFK 112

>GAL10_SCHPO (Q9HDU3) GAL10 bifunctional protein [Includes: UDP-glucose|
           4-epimerase (EC 5.1.3.2) (Galactowaldenase); Aldose
           1-epimerase (EC 5.1.3.3) (Mutarotase)]
          Length = 713

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
 Frame = +1

Query: 322 NVCGTLTLADVCRARGLVLINYAT-----GCIFEYDAXHPLGSGVGFKEEDTPNFVGSFY 486
           N+CGT+TL +V R   +  + +++     G    +D   P+        E  PN   + Y
Sbjct: 105 NICGTITLLNVMREHRVKTVVFSSSATVYGDATRFDNMIPI-------PESCPNDPTNPY 157

Query: 487 SKTKAMVEELL 519
            KTK  +E ++
Sbjct: 158 GKTKYAIENII 168


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,281,493
Number of Sequences: 219361
Number of extensions: 914674
Number of successful extensions: 3102
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3101
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3927707336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)