ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart08g04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468454.1| Oryza sativa (japonica cultivar-group), mRNA 309 4e-81
2dbj|AK058380.1| Oryza sativa (japonica cultivar-group) cDNA clon... 309 4e-81
3dbj|AK069150.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
5dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
6dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
7gb|AC023688.4| Drosophila melanogaster X BAC RP98-42F7 (Roswell ... 48 0.027
8ref|NM_132553.1| Drosophila melanogaster CG1950-RA (CG1950), mRNA 48 0.027
9gb|AY089303.1| Drosophila melanogaster AT10439 full insert cDNA 48 0.027
10gb|AE003488.3| Drosophila melanogaster chromosome X, section 40 ... 48 0.027
11ref|XM_514069.1| PREDICTED: Pan troglodytes LOC457596 (LOC457596... 46 0.10
12gb|BC015521.1| Homo sapiens ubiquitin carboxyl-terminal hydrolas... 46 0.10
13gb|BC006891.1| Mus musculus ubiquitin carboxyl-terminal esterase... 46 0.10
14ref|XM_536116.2| PREDICTED: Canis familiaris similar to ubiquiti... 46 0.10
15ref|NM_015984.1| Homo sapiens ubiquitin carboxyl-terminal hydrol... 46 0.10
16gb|BC025369.2| Homo sapiens ubiquitin carboxyl-terminal hydrolas... 46 0.10
17gb|BT007900.1| Synthetic construct Homo sapiens ubiquitin carbox... 46 0.10
18gb|BT006790.1| Homo sapiens ubiquitin carboxyl-terminal hydrolas... 46 0.10
19emb|CR860359.1| Pongo pygmaeus mRNA; cDNA DKFZp459M0513 (from cl... 46 0.10
20gb|AC092945.6| Homo sapiens 12 BAC RP11-290O5 (Roswell Park Canc... 46 0.10
21emb|CR606979.1| full-length cDNA clone CS0DJ001YI19 of T cells (... 46 0.10
22gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete... 46 0.10
23gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, comple... 46 0.10
24ref|NM_019562.1| Mus musculus ubiquitin carboxyl-terminal estera... 46 0.10
25dbj|AK007860.1| Mus musculus 10 day old male pancreas cDNA, RIKE... 46 0.10
26dbj|AK017925.1| Mus musculus adult male thymus cDNA, RIKEN full-... 46 0.10
27dbj|AK011117.1| Mus musculus 13 days embryo liver cDNA, RIKEN fu... 46 0.10
28gb|AF151828.1|AF151828 Homo sapiens CGI-70 protein mRNA, complet... 46 0.10
29gb|AF157320.1|AF157320 Homo sapiens AD-019 protein mRNA, complet... 46 0.10
30gb|AY891492.1| Synthetic construct Homo sapiens clone FLH023503.... 46 0.10
31gb|AY888857.1| Synthetic construct Homo sapiens clone FLH023506.... 46 0.10
32dbj|AK024751.1| Homo sapiens cDNA: FLJ21098 fis, clone CAS04026,... 46 0.10
33gb|AF175903.1|AF175903 Mus musculus ubiquitin C-terminal hydrola... 46 0.10
34gb|AF148447.1|AF148447 Mus musculus ubiquitin C-terminal hydrola... 46 0.10
35gb|AF147717.1|AF147717 Homo sapiens ubiquitin C-terminal hydrola... 46 0.10
36gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.41
37emb|AL136370.4| Human DNA sequence from clone RP11-101E13 on chr... 44 0.41
38gb|AC093920.4| Oryza sativa (japonica cultivar-group) chromosome... 44 0.41
39dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
40dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
41gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 dapto... 44 0.41
42ref|XM_573467.1| PREDICTED: Rattus norvegicus ubiquitin carboxyl... 44 0.41
43gb|BC088841.1| Rattus norvegicus ubiquitin carboxyl-terminal hyd... 44 0.41
44gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.41
45emb|BX813303.2|CNS0B0PK Oryza sativa chromosome 12, . Partial se... 44 0.41
46ref|NM_001012149.1| Rattus norvegicus ubiquitin carboxyl-termina... 44 0.41
47emb|AL732643.6|CNS08C9I Oryza sativa chromosome 12, . BAC OSJNBa... 44 0.41
48emb|AL592403.6| Mouse DNA sequence from clone RP23-90A8 on chrom... 44 0.41
49gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 42 1.6
50ref|XR_003386.1| PREDICTED: Mus musculus similar to sterile alph... 42 1.6
51ref|XM_985521.1| PREDICTED: Mus musculus similar to sterile alph... 42 1.6
52emb|CR729364.1|CNS0GPQ2 Tetraodon nigroviridis full-length cDNA 42 1.6
53emb|CR728743.2|CNS0GP8T Tetraodon nigroviridis full-length cDNA 42 1.6
54emb|CR725893.2|CNS0GN1N Tetraodon nigroviridis full-length cDNA 42 1.6
55emb|CR725393.1|CNS0GMNR Tetraodon nigroviridis full-length cDNA 42 1.6
56emb|CR725002.2|CNS0GMCW Tetraodon nigroviridis full-length cDNA 42 1.6
57emb|CR724028.2|CNS0GLLU Tetraodon nigroviridis full-length cDNA 42 1.6
58emb|CR724851.1|CNS0GM8P Tetraodon nigroviridis full-length cDNA 42 1.6
59emb|CR703168.2|CNS0G5IK Tetraodon nigroviridis full-length cDNA 42 1.6
60emb|CR686440.2|CNS0FSLW Tetraodon nigroviridis full-length cDNA 42 1.6
61emb|AL132868.24|HSA262P20 Human DNA sequence from clone RP11-262... 42 1.6
62gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 1.6
63gb|AC132381.4| Mus musculus BAC clone RP23-424F5 from chromosome... 42 1.6
64ref|XM_347035.2| PREDICTED: Rattus norvegicus similar to mKIAA09... 42 1.6
65dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.6
66gb|AC156028.2| Mus musculus BAC clone RP23-61A11 from chromosome... 42 1.6
67ref|XM_550091.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
68gb|DQ214854.1| Taeniopygia guttata clone 0063P0025G11 ubiquitin ... 40 6.5
69gb|DQ214853.1| Taeniopygia guttata clone 0063P0027D06 ubiquitin ... 40 6.5
70ref|NM_192819.1| Oryza sativa (japonica cultivar-group), predic... 40 6.5
71gb|AC137606.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
72gb|AC112971.8| Mus musculus chromosome 1, clone RP24-444M12, com... 40 6.5
73gb|AC137624.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
74gb|AC113084.12| Mus musculus chromosome 1, clone RP23-292F19, co... 40 6.5
75gb|AY197678.1| Elm yellows phytoplasma strain EY627 ribosomal pr... 40 6.5
76gb|AY197677.1| Elm yellows phytoplasma strain EY626 ribosomal pr... 40 6.5
77gb|AY197676.1| Elm yellows phytoplasma strain EY125 ribosomal pr... 40 6.5
78gb|AY197675.1| Elm yellows phytoplasma strain EY1 ribosomal prot... 40 6.5
79gb|AY197674.1| Hemp dogbane yellows phytoplasma strain HD1 ribos... 40 6.5
80gb|AY197673.1| Spartium witches'-broom phytoplasma strain SpaWB2... 40 6.5
81gb|AY197672.1| Spartium witches'-broom phytoplasma strain SpaWB2... 40 6.5
82gb|AY197671.1| Rubus stunt phytoplasma strain RuSR19 ribosomal p... 40 6.5
83gb|AY197670.1| Rubus stunt phytoplasma strain RuS971 ribosomal p... 40 6.5
84gb|AY197669.1| Rubus stunt phytoplasma strain RuS400 ribosomal p... 40 6.5
85gb|AY197668.1| Rubus stunt phytoplasma strain RUS ribosomal prot... 40 6.5
86gb|AY197667.1| Alder yellows phytoplasma strain ALY1068 ribosoma... 40 6.5
87gb|AY197666.1| Alder yellows phytoplasma strain ALY ribosomal pr... 40 6.5
88gb|AY197665.1| Flavescence doree phytoplasma strain FD-C ribosom... 40 6.5
89gb|AY197664.1| Flavescence doree phytoplasma strain FD-D ribosom... 40 6.5
90gb|AY197663.1| Flavescence doree phytoplasma strain FD70 ribosom... 40 6.5
91gb|AY197662.1| Alder yellows phytoplasma strain ALY882 ribosomal... 40 6.5
92gb|AC137967.14| Mus musculus chromosome 10, clone RP24-323I24, c... 40 6.5
93gb|AF385627.1| Flavescence doree phytoplasma ribosomal protein L... 40 6.5
94gb|AC098712.3| Mus musculus BAC clone RP23-2A21 from 10, complet... 40 6.5
95ref|NM_010250.2| Mus musculus gamma-aminobutyric acid (GABA-A) r... 40 6.5
96gb|AF396938.1| Elm yellows phytoplasma ribosomal protein S3 (rps... 40 6.5
97gb|AF396937.1| Flavescence doree phytoplasma strain AT4 ribosoma... 40 6.5
98gb|AF396936.1| Alder yellows phytoplasma ribosomal protein S3 (r... 40 6.5
99gb|AF396951.1| Flavescence doree phytoplasma strain VR2 ribosoma... 40 6.5
100gb|AF396950.1| Flavescence doree phytoplasma ribosomal protein S... 40 6.5
101gb|AF396949.1| Elm witches'-broom phytoplasma ribosomal protein ... 40 6.5
102gb|AF396948.1| Flavescence doree phytoplasma strain PN6 ribosoma... 40 6.5
103gb|AF396947.1| Flavescence doree phytoplasma strain TV51 ribosom... 40 6.5
104gb|AF396946.1| Flavescence doree phytoplasma strain TV46 ribosom... 40 6.5
105gb|AF396945.1| Flavescence doree phytoplasma strain AL202 riboso... 40 6.5
106gb|AF396944.1| Rubus stunt phytoplasma ribosomal protein S3 (rps... 40 6.5
107gb|AF396943.1| Flavescence doree phytoplasma strain PC2 ribosoma... 40 6.5
108gb|AF396942.1| Flavescence doree phytoplasma strain PV259 riboso... 40 6.5
109gb|AF396940.1| Flavescence doree phytoplasma strain FD88 ribosom... 40 6.5
110gb|AF396939.1| Flavescence doree phytoplasma strain FD70 ribosom... 40 6.5
111gb|BT009226.1| Triticum aestivum clone wle1n.pk0085.f11:fis, ful... 40 6.5
112emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete ... 40 6.5
113emb|AL645752.9| Mouse DNA sequence from clone RP23-244K22 on chr... 40 6.5
114gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 6.5
115gb|AC100786.2| Homo sapiens chromosome 17, clone CTD-2514K5, com... 40 6.5
116dbj|AK141596.1| Mus musculus adult male hippocampus cDNA, RIKEN ... 40 6.5
117gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.5
118gb|AC157804.7| Mus musculus chromosome 1, clone RP24-318G19, com... 40 6.5
119gb|AC137898.6| Homo sapiens chromosome 17, clone RP11-101O21, co... 40 6.5
120dbj|AK039496.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 40 6.5
121gb|U96172.1|COU96172 Crithidia oncopelti mini-exon gene repeat 40 6.5
122dbj|AK090121.1| Mus musculus bone marrow stroma cell CRL-2028 SR... 40 6.5
123dbj|AK034095.1| Mus musculus adult male diencephalon cDNA, RIKEN... 40 6.5
124gb|AC129563.14| Mus musculus chromosome 15, clone RP23-223M20, c... 40 6.5
125dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
126dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
127dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.5
128gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.5
129dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
130gb|AC116691.12| Mus musculus chromosome 1, clone RP24-312I13, co... 40 6.5
131emb|BX537133.3| Zebrafish DNA sequence from clone DKEY-90M5 in l... 40 6.5
132emb|AL121768.4|CNS01DSB Human chromosome 14 DNA sequence BAC R-9... 40 6.5
133gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 6.5
134gb|AC145913.3| Gallus gallus BAC clone CH261-50N9 from chromosom... 40 6.5
135gb|M86566.1|MUSGABA1A Mouse GABA-A receptor alpha-1 subunit mRNA... 40 6.5
136dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 6.5
137gb|S70397.1|S70397 {FRA16A, folate-sensitive fragile site} [huma... 40 6.5
138emb|X61430.1|MMGABAA1S M.musculus mRNA for GABA-A receptor alpha... 40 6.5
139gb|M63436.1|MUSGABAAS Mouse GABA-a/benzodiazepine (GABA-a/BZ) re... 40 6.5 
>ref|XM_468454.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1452

 Score =  309 bits (156), Expect = 4e-81
 Identities = 259/294 (88%)
 Strand = Plus / Plus

                                                                       
Query: 181 gcgaggatgtcgtggtgcacgatcgagtccgaccccggtgttttcaccgagttgattcag 240
           ||||||||||||||||||||||| ||||| || ||||||||||||||||| ||||| |||
Sbjct: 195 gcgaggatgtcgtggtgcacgattgagtctgatcccggtgttttcaccgaattgatccag 254

                                                                       
Query: 241 gagatgcaagtaaaaggtgtacaggtggaggagctttactctctcgatgtggactctctt 300
           |||||||||||||||||||| |||||||| || ||||||||||| |||||||||||| ||
Sbjct: 255 gagatgcaagtaaaaggtgttcaggtggaagaactttactctcttgatgtggactctatt 314

                                                                       
Query: 301 agtcaactacagccagtgtatgggttaatttttctcttcaagtggatgcctggaggaaat 360
           ||| |||| | |||||| |||||| ||||||||||||||||||||||| |||| | ||| 
Sbjct: 315 agtgaactgcggccagtttatgggctaatttttctcttcaagtggatggctggggaaaag 374

                                                                       
Query: 361 gatgaacggcctgttgtcagcgacccanacccaaacctcttttttgctcgccaggtgatc 420
           |||||||||||||| ||||  || ||| |||||||||| || |||||| ||||||| |||
Sbjct: 375 gatgaacggcctgtcgtcaaagatccaaacccaaaccttttctttgctagccaggtcatc 434

                                                                 
Query: 421 acgaatgcatgtgccactcangctatcctctcaatcctcatgaaccgcccagaa 474
            | ||||||||||| ||||| ||||| || |||||||||||||| |||||||||
Sbjct: 435 cctaatgcatgtgctactcaagctattctgtcaatcctcatgaatcgcccagaa 488
to top
>dbj|AK058380.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-H04, full
           insert sequence
          Length = 1452

 Score =  309 bits (156), Expect = 4e-81
 Identities = 259/294 (88%)
 Strand = Plus / Plus

                                                                       
Query: 181 gcgaggatgtcgtggtgcacgatcgagtccgaccccggtgttttcaccgagttgattcag 240
           ||||||||||||||||||||||| ||||| || ||||||||||||||||| ||||| |||
Sbjct: 195 gcgaggatgtcgtggtgcacgattgagtctgatcccggtgttttcaccgaattgatccag 254

                                                                       
Query: 241 gagatgcaagtaaaaggtgtacaggtggaggagctttactctctcgatgtggactctctt 300
           |||||||||||||||||||| |||||||| || ||||||||||| |||||||||||| ||
Sbjct: 255 gagatgcaagtaaaaggtgttcaggtggaagaactttactctcttgatgtggactctatt 314

                                                                       
Query: 301 agtcaactacagccagtgtatgggttaatttttctcttcaagtggatgcctggaggaaat 360
           ||| |||| | |||||| |||||| ||||||||||||||||||||||| |||| | ||| 
Sbjct: 315 agtgaactgcggccagtttatgggctaatttttctcttcaagtggatggctggggaaaag 374

                                                                       
Query: 361 gatgaacggcctgttgtcagcgacccanacccaaacctcttttttgctcgccaggtgatc 420
           |||||||||||||| ||||  || ||| |||||||||| || |||||| ||||||| |||
Sbjct: 375 gatgaacggcctgtcgtcaaagatccaaacccaaaccttttctttgctagccaggtcatc 434

                                                                 
Query: 421 acgaatgcatgtgccactcangctatcctctcaatcctcatgaaccgcccagaa 474
            | ||||||||||| ||||| ||||| || |||||||||||||| |||||||||
Sbjct: 435 cctaatgcatgtgctactcaagctattctgtcaatcctcatgaatcgcccagaa 488
to top
>dbj|AK069150.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004L19, full
            insert sequence
          Length = 2320

 Score =  198 bits (100), Expect = 1e-47
 Identities = 185/214 (86%)
 Strand = Plus / Plus

                                                                        
Query: 261  acaggtggaggagctttactctctcgatgtggactctcttagtcaactacagccagtgta 320
            ||||||||| || ||||||||||| |||||||||||| ||||| |||| | |||||| ||
Sbjct: 1056 acaggtggaagaactttactctcttgatgtggactctattagtgaactgcggccagttta 1115

                                                                        
Query: 321  tgggttaatttttctcttcaagtggatgcctggaggaaatgatgaacggcctgttgtcag 380
            |||| ||||||||||||||||||||||| |||| | ||| |||||||||||||| |||| 
Sbjct: 1116 tgggctaatttttctcttcaagtggatggctggggaaaaggatgaacggcctgtcgtcaa 1175

                                                                        
Query: 381  cgacccanacccaaacctcttttttgctcgccaggtgatcacgaatgcatgtgccactca 440
             || ||| |||||||||| || |||||| ||||||| ||| | ||||||||||| |||||
Sbjct: 1176 agatccaaacccaaaccttttctttgctagccaggtcatccctaatgcatgtgctactca 1235

                                              
Query: 441  ngctatcctctcaatcctcatgaaccgcccagaa 474
             ||||| || |||||||||||||| |||||||||
Sbjct: 1236 agctattctgtcaatcctcatgaatcgcccagaa 1269



 Score =  123 bits (62), Expect = 6e-25
 Identities = 80/86 (93%)
 Strand = Plus / Plus

                                                                       
Query: 181 gcgaggatgtcgtggtgcacgatcgagtccgaccccggtgttttcaccgagttgattcag 240
           ||||||||||||||||||||||| ||||| || ||||||||||||||||| ||||| |||
Sbjct: 249 gcgaggatgtcgtggtgcacgattgagtctgatcccggtgttttcaccgaattgatccag 308

                                     
Query: 241 gagatgcaagtaaaaggtgtacaggt 266
           |||||||||||||||||||| |||||
Sbjct: 309 gagatgcaagtaaaaggtgttcaggt 334
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 91/105 (86%)
 Strand = Plus / Plus

                                                                            
Query: 312      gccagtgtatgggttaatttttctcttcaagtggatgcctggaggaaatgatgaacggcc 371
                |||||| |||||| ||||||||||||||||||||||| |||| | ||| |||||||||||
Sbjct: 35313740 gccagtttatgggctaatttttctcttcaagtggatggctggggaaaaggatgaacggcc 35313799

                                                             
Query: 372      tgttgtcagcgacccanacccaaacctcttttttgctcgccaggt 416
                ||| ||||  || ||| |||||||||| || |||||| |||||||
Sbjct: 35313800 tgtcgtcaaagatccaaacccaaaccttttctttgctagccaggt 35313844



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                                  
Query: 217      ggtgttttcaccgagttgattcaggagatgcaagtaaaaggtgtacaggt 266
                |||||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 35312839 ggtgttttcaccgaattgatccaggagatgcaagtaaaaggtgttcaggt 35312888



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                            
Query: 410      gccaggtgatcacgaatgcatgtgccactcangctatcctctcaatcctcatgaaccgcc 469
                ||||||| ||| | ||||||||||| ||||| ||||| || |||||||||||||| ||||
Sbjct: 35313919 gccaggtcatccctaatgcatgtgctactcaagctattctgtcaatcctcatgaatcgcc 35313978

                     
Query: 470      cagaa 474
                |||||
Sbjct: 35313979 cagaa 35313983



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                                
Query: 261      acaggtggaggagctttactctctcgatgtggactctcttagtcaact 308
                ||||||||| || ||||||||||| |||||||||||| ||||| ||||
Sbjct: 35313610 acaggtggaagaactttactctcttgatgtggactctattagtgaact 35313657



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                        
Query: 181      gcgaggatgtcgtggtgcacgatcgagtccgaccccggtg 220
                ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 35312307 gcgaggatgtcgtggtgcacgattgagtctgatcccggtg 35312346
to top
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1119_A01
          Length = 108727

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 91/105 (86%)
 Strand = Plus / Plus

                                                                         
Query: 312   gccagtgtatgggttaatttttctcttcaagtggatgcctggaggaaatgatgaacggcc 371
             |||||| |||||| ||||||||||||||||||||||| |||| | ||| |||||||||||
Sbjct: 64074 gccagtttatgggctaatttttctcttcaagtggatggctggggaaaaggatgaacggcc 64133

                                                          
Query: 372   tgttgtcagcgacccanacccaaacctcttttttgctcgccaggt 416
             ||| ||||  || ||| |||||||||| || |||||| |||||||
Sbjct: 64134 tgtcgtcaaagatccaaacccaaaccttttctttgctagccaggt 64178



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                               
Query: 217   ggtgttttcaccgagttgattcaggagatgcaagtaaaaggtgtacaggt 266
             |||||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 63173 ggtgttttcaccgaattgatccaggagatgcaagtaaaaggtgttcaggt 63222



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                         
Query: 410   gccaggtgatcacgaatgcatgtgccactcangctatcctctcaatcctcatgaaccgcc 469
             ||||||| ||| | ||||||||||| ||||| ||||| || |||||||||||||| ||||
Sbjct: 64253 gccaggtcatccctaatgcatgtgctactcaagctattctgtcaatcctcatgaatcgcc 64312

                  
Query: 470   cagaa 474
             |||||
Sbjct: 64313 cagaa 64317



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 261   acaggtggaggagctttactctctcgatgtggactctcttagtcaact 308
             ||||||||| || ||||||||||| |||||||||||| ||||| ||||
Sbjct: 63944 acaggtggaagaactttactctcttgatgtggactctattagtgaact 63991



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 181   gcgaggatgtcgtggtgcacgatcgagtccgaccccggtg 220
             ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 62641 gcgaggatgtcgtggtgcacgattgagtctgatcccggtg 62680
to top
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0474F11
          Length = 139544

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 91/105 (86%)
 Strand = Plus / Plus

                                                                          
Query: 312    gccagtgtatgggttaatttttctcttcaagtggatgcctggaggaaatgatgaacggcc 371
              |||||| |||||| ||||||||||||||||||||||| |||| | ||| |||||||||||
Sbjct: 125790 gccagtttatgggctaatttttctcttcaagtggatggctggggaaaaggatgaacggcc 125849

                                                           
Query: 372    tgttgtcagcgacccanacccaaacctcttttttgctcgccaggt 416
              ||| ||||  || ||| |||||||||| || |||||| |||||||
Sbjct: 125850 tgtcgtcaaagatccaaacccaaaccttttctttgctagccaggt 125894



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                                
Query: 217    ggtgttttcaccgagttgattcaggagatgcaagtaaaaggtgtacaggt 266
              |||||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 124889 ggtgttttcaccgaattgatccaggagatgcaagtaaaaggtgttcaggt 124938



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                          
Query: 410    gccaggtgatcacgaatgcatgtgccactcangctatcctctcaatcctcatgaaccgcc 469
              ||||||| ||| | ||||||||||| ||||| ||||| || |||||||||||||| ||||
Sbjct: 125969 gccaggtcatccctaatgcatgtgctactcaagctattctgtcaatcctcatgaatcgcc 126028

                   
Query: 470    cagaa 474
              |||||
Sbjct: 126029 cagaa 126033



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                              
Query: 261    acaggtggaggagctttactctctcgatgtggactctcttagtcaact 308
              ||||||||| || ||||||||||| |||||||||||| ||||| ||||
Sbjct: 125660 acaggtggaagaactttactctcttgatgtggactctattagtgaact 125707



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                      
Query: 181    gcgaggatgtcgtggtgcacgatcgagtccgaccccggtg 220
              ||||||||||||||||||||||| ||||| || |||||||
Sbjct: 124357 gcgaggatgtcgtggtgcacgattgagtctgatcccggtg 124396
to top
>gb|AC023688.4| Drosophila melanogaster X BAC RP98-42F7 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 186714

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 398   tcttttttgctcgccaggtgatcacgaatgcatgtgccac 437
             |||| |||||||||||||||||  ||||||| ||||||||
Sbjct: 47001 tcttctttgctcgccaggtgataccgaatgcctgtgccac 47040
to top
>ref|NM_132553.1| Drosophila melanogaster CG1950-RA (CG1950), mRNA
          Length = 1298

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 398 tcttttttgctcgccaggtgatcacgaatgcatgtgccac 437
           |||| |||||||||||||||||  ||||||| ||||||||
Sbjct: 385 tcttctttgctcgccaggtgataccgaatgcctgtgccac 424
to top
>gb|AY089303.1| Drosophila melanogaster AT10439 full insert cDNA
          Length = 1318

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 398 tcttttttgctcgccaggtgatcacgaatgcatgtgccac 437
           |||| |||||||||||||||||  ||||||| ||||||||
Sbjct: 385 tcttctttgctcgccaggtgataccgaatgcctgtgccac 424
to top
>gb|AE003488.3| Drosophila melanogaster chromosome X, section 40 of 74 of the complete
             sequence
          Length = 315134

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 398   tcttttttgctcgccaggtgatcacgaatgcatgtgccac 437
             |||| |||||||||||||||||  ||||||| ||||||||
Sbjct: 39109 tcttctttgctcgccaggtgataccgaatgcctgtgccac 39070
to top
>ref|XM_514069.1| PREDICTED: Pan troglodytes LOC457596 (LOC457596), mRNA
          Length = 2148

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 311 agccagtgtatgggttaatttttctcttcaagtgg 345
           |||||||  |||||||||||||||| |||||||||
Sbjct: 398 agccagttcatgggttaatttttcttttcaagtgg 432
to top
>gb|BC015521.1| Homo sapiens ubiquitin carboxyl-terminal hydrolase L5, mRNA (cDNA
           clone MGC:9314 IMAGE:3912584), complete cds
          Length = 1649

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 311 agccagtgtatgggttaatttttctcttcaagtgg 345
           |||||||  |||||||||||||||| |||||||||
Sbjct: 206 agccagttcatgggttaatttttcttttcaagtgg 240
to top
>gb|BC006891.1| Mus musculus ubiquitin carboxyl-terminal esterase L5, mRNA (cDNA
           clone MGC:6295 IMAGE:2650799), complete cds
          Length = 1307

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 311 agccagtgtatgggttaatttttctcttcaagtgg 345
           |||||||  |||||||||||||||| |||||||||
Sbjct: 216 agccagttcatgggttaatttttcttttcaagtgg 250
to top
>ref|XM_536116.2| PREDICTED: Canis familiaris similar to ubiquitin C-terminal
           hydrolase UCH37 (LOC478958), mRNA
          Length = 1510

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 311 agccagtgtatgggttaatttttctcttcaagtgg 345
           |||||||  |||||||||||||||| |||||||||
Sbjct: 254 agccagttcatgggttaatttttcttttcaagtgg 288
to top
>ref|NM_015984.1| Homo sapiens ubiquitin carboxyl-terminal hydrolase L5 (UCHL5), mRNA
          Length = 1728

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 311 agccagtgtatgggttaatttttctcttcaagtgg 345
           |||||||  |||||||||||||||| |||||||||
Sbjct: 271 agccagttcatgggttaatttttcttttcaagtgg 305
to top
>gb|BC025369.2| Homo sapiens ubiquitin carboxyl-terminal hydrolase L5, mRNA (cDNA
           clone MGC:15155 IMAGE:3937407), complete cds
          Length = 1607

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 311 agccagtgtatgggttaatttttctcttcaagtgg 345
           |||||||  |||||||||||||||| |||||||||
Sbjct: 251 agccagttcatgggttaatttttcttttcaagtgg 285
to top
>gb|BT007900.1| Synthetic construct Homo sapiens ubiquitin carboxyl-terminal
           hydrolase L5 mRNA, partial cds
          Length = 987

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 311 agccagtgtatgggttaatttttctcttcaagtgg 345
           |||||||  |||||||||||||||| |||||||||
Sbjct: 140 agccagttcatgggttaatttttcttttcaagtgg 174
to top
>gb|BT006790.1| Homo sapiens ubiquitin carboxyl-terminal hydrolase L5 mRNA,
           complete cds
          Length = 987

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 311 agccagtgtatgggttaatttttctcttcaagtgg 345
           |||||||  |||||||||||||||| |||||||||
Sbjct: 140 agccagttcatgggttaatttttcttttcaagtgg 174
to top
>emb|CR860359.1| Pongo pygmaeus mRNA; cDNA DKFZp459M0513 (from clone DKFZp459M0513)
          Length = 1680

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 311 agccagtgtatgggttaatttttctcttcaagtgg 345
           |||||||  |||||||||||||||| |||||||||
Sbjct: 146 agccagttcatgggttaatttttcttttcaagtgg 180
to top
>gb|AC092945.6| Homo sapiens 12 BAC RP11-290O5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 146969

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 320   atgggttaatttttctcttcaagtgga 346
             |||||||||||||||| ||||||||||
Sbjct: 92123 atgggttaatttttcttttcaagtgga 92097
to top
>emb|CR606979.1| full-length cDNA clone CS0DJ001YI19 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 1607

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 311 agccagtgtatgggttaatttttctcttcaagtgg 345
           |||||||  |||||||||||||||| |||||||||
Sbjct: 208 agccagttcatgggttaatttttcttttcaagtgg 242
to top
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence
          Length = 102653

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 12    cgtcagcacgcccgcgccgccgc 34
             |||||||||||||||||||||||
Sbjct: 80354 cgtcagcacgcccgcgccgccgc 80376
to top
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence
          Length = 79677

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 12    cgtcagcacgcccgcgccgccgc 34
             |||||||||||||||||||||||
Sbjct: 49519 cgtcagcacgcccgcgccgccgc 49497
to top
>ref|NM_019562.1| Mus musculus ubiquitin carboxyl-terminal esterase L5 (Uchl5), mRNA
          Length = 1143

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 311 agccagtgtatgggttaatttttctcttcaagtgg 345
           |||||||  |||||||||||||||| |||||||||
Sbjct: 206 agccagttcatgggttaatttttcttttcaagtgg 240
to top
>dbj|AK007860.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
           enriched library, clone:1810054K05 product:ubiquitin
           carboxyl-terminal esterase L5, full insert sequence
          Length = 1124

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 311 agccagtgtatgggttaatttttctcttcaagtgg 345
           |||||||  |||||||||||||||| |||||||||
Sbjct: 77  agccagttcatgggttaatttttcttttcaagtgg 111
to top
>dbj|AK017925.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
           library, clone:5830413B11 product:ubiquitin
           carboxyl-terminal esterase L5, full insert sequence
          Length = 1847

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 311 agccagtgtatgggttaatttttctcttcaagtgg 345
           |||||||  |||||||||||||||| |||||||||
Sbjct: 261 agccagttcatgggttaatttttcttttcaagtgg 295
to top
>dbj|AK011117.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched
           library, clone:2510049D03 product:ubiquitin
           carboxyl-terminal esterase L5, full insert sequence
          Length = 1155

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 311 agccagtgtatgggttaatttttctcttcaagtgg 345
           |||||||  |||||||||||||||| |||||||||
Sbjct: 230 agccagttcatgggttaatttttcttttcaagtgg 264
to top
>gb|AF151828.1|AF151828 Homo sapiens CGI-70 protein mRNA, complete cds
          Length = 1170

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 311 agccagtgtatgggttaatttttctcttcaagtgg 345
           |||||||  |||||||||||||||| |||||||||
Sbjct: 153 agccagttcatgggttaatttttcttttcaagtgg 187
to top
>gb|AF157320.1|AF157320 Homo sapiens AD-019 protein mRNA, complete cds
          Length = 1318

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 311 agccagtgtatgggttaatttttctcttcaagtgg 345
           |||||||  |||||||||||||||| |||||||||
Sbjct: 288 agccagttcatgggttaatttttcttttcaagtgg 322
to top
>gb|AY891492.1| Synthetic construct Homo sapiens clone FLH023503.01L ubiquitin
           carboxyl-terminal hydrolase L5 (UCHL5) mRNA, partial cds
          Length = 987

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 311 agccagtgtatgggttaatttttctcttcaagtgg 345
           |||||||  |||||||||||||||| |||||||||
Sbjct: 140 agccagttcatgggttaatttttcttttcaagtgg 174
to top
>gb|AY888857.1| Synthetic construct Homo sapiens clone FLH023506.01X ubiquitin
           carboxyl-terminal hydrolase L5 (UCHL5) mRNA, complete
           cds
          Length = 987

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 311 agccagtgtatgggttaatttttctcttcaagtgg 345
           |||||||  |||||||||||||||| |||||||||
Sbjct: 140 agccagttcatgggttaatttttcttttcaagtgg 174
to top
>dbj|AK024751.1| Homo sapiens cDNA: FLJ21098 fis, clone CAS04026, highly similar to
           AF147717 Homo sapiens ubiquitin C-terminal hydrolase
           UCH37 (UCH37) mRNA
          Length = 1672

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 311 agccagtgtatgggttaatttttctcttcaagtgg 345
           |||||||  |||||||||||||||| |||||||||
Sbjct: 219 agccagttcatgggttaatttttcttttcaagtgg 253
to top
>gb|AF175903.1|AF175903 Mus musculus ubiquitin C-terminal hydrolase UCH-L5 mRNA, complete
           cds
          Length = 1329

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 311 agccagtgtatgggttaatttttctcttcaagtgg 345
           |||||||  |||||||||||||||| |||||||||
Sbjct: 215 agccagttcatgggttaatttttcttttcaagtgg 249
to top
>gb|AF148447.1|AF148447 Mus musculus ubiquitin C-terminal hydrolase UCH37 (UCH37) mRNA,
           complete cds
          Length = 1143

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 311 agccagtgtatgggttaatttttctcttcaagtgg 345
           |||||||  |||||||||||||||| |||||||||
Sbjct: 206 agccagttcatgggttaatttttcttttcaagtgg 240
to top
>gb|AF147717.1|AF147717 Homo sapiens ubiquitin C-terminal hydrolase UCH37 (UCH37) mRNA,
           complete cds
          Length = 1728

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 311 agccagtgtatgggttaatttttctcttcaagtgg 345
           |||||||  |||||||||||||||| |||||||||
Sbjct: 271 agccagttcatgggttaatttttcttttcaagtgg 305
to top
>gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1111_A10,
              complete sequence
          Length = 155106

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 26     cgccgccgccccctcccgtcgccgctgccg 55
              |||||||||| || ||||||||||||||||
Sbjct: 148499 cgccgccgccaccgcccgtcgccgctgccg 148528
to top
>emb|AL136370.4| Human DNA sequence from clone RP11-101E13 on chromosome 1q31.2-31.3
             Contains a zinc finger protein 101 (ZNF101) pseudogene,
             the UCHL5 gene for ubiquitin carboxyl-terminal hydrolase
             L5, the SSA2 gene for Sjogren syndrome antigen A2 (60kDa,
             ribonucleoprotein autoantigen SS-A/Ro), the GLRX2 gene for
             glutaredoxin 2 and two CpG islands, complete sequence
          Length = 147978

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 320   atgggttaatttttctcttcaagtgg 345
             |||||||||||||||| |||||||||
Sbjct: 71776 atgggttaatttttcttttcaagtgg 71801
to top
>gb|AC093920.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1725_E07,
             complete sequence
          Length = 87244

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 26    cgccgccgccccctcccgtcgccgctgccg 55
             |||||||||| || ||||||||||||||||
Sbjct: 49278 cgccgccgccaccgcccgtcgccgctgccg 49307
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 22       cccgcgccgccgccccctcccg 43
                ||||||||||||||||||||||
Sbjct: 10226776 cccgcgccgccgccccctcccg 10226755
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 26      cgccgccgccccctcccgtcgccgctgccg 55
               |||||||||| || ||||||||||||||||
Sbjct: 5233996 cgccgccgccaccgcccgtcgccgctgccg 5234025



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 230     agttgattcaggagatgcaa 249
               ||||||||||||||||||||
Sbjct: 8631859 agttgattcaggagatgcaa 8631840
to top
>gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 daptomycin biosynthetic
             gene cluster, partial sequence
          Length = 127559

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 79    ctcgccgtctccacagcccccggcgcgcgcggag 112
             |||||||||||| |||||| ||||||| ||||||
Sbjct: 35843 ctcgccgtctcctcagccctcggcgcgagcggag 35810
to top
>ref|XM_573467.1| PREDICTED: Rattus norvegicus ubiquitin carboxyl-terminal hydrolase
           L5 (predicted) (Uchl5_predicted), mRNA
          Length = 1853

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 320 atgggttaatttttctcttcaagtgg 345
           |||||||||||||||| |||||||||
Sbjct: 262 atgggttaatttttcttttcaagtgg 287
to top
>gb|BC088841.1| Rattus norvegicus ubiquitin carboxyl-terminal hydrolase L5, mRNA
           (cDNA clone MGC:105874 IMAGE:7125859), complete cds
          Length = 1824

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 320 atgggttaatttttctcttcaagtgg 345
           |||||||||||||||| |||||||||
Sbjct: 232 atgggttaatttttcttttcaagtgg 257
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 22       cccgcgccgccgccccctcccg 43
                ||||||||||||||||||||||
Sbjct: 10226658 cccgcgccgccgccccctcccg 10226637
to top
>emb|BX813303.2|CNS0B0PK Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0089G08
             of library OSJNBa from chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 13001

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 22    cccgcgccgccgccccctcccg 43
             ||||||||||||||||||||||
Sbjct: 12383 cccgcgccgccgccccctcccg 12404
to top
>ref|NM_001012149.1| Rattus norvegicus ubiquitin carboxyl-terminal hydrolase L5 (Uchl5),
           mRNA
          Length = 1824

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 320 atgggttaatttttctcttcaagtgg 345
           |||||||||||||||| |||||||||
Sbjct: 232 atgggttaatttttcttttcaagtgg 257
to top
>emb|AL732643.6|CNS08C9I Oryza sativa chromosome 12, . BAC OSJNBa0094N04 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 92382

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 22    cccgcgccgccgccccctcccg 43
             ||||||||||||||||||||||
Sbjct: 90978 cccgcgccgccgccccctcccg 90957
to top
>emb|AL592403.6| Mouse DNA sequence from clone RP23-90A8 on chromosome 1, complete
             sequence
          Length = 165527

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 320   atgggttaatttttctcttcaagtgg 345
             |||||||||||||||| |||||||||
Sbjct: 94934 atgggttaatttttcttttcaagtgg 94959
to top
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 18      cacgcccgcgccgccgccccc 38
               |||||||||||||||||||||
Sbjct: 1609159 cacgcccgcgccgccgccccc 1609139



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 19      acgcccgcgccgccgccccc 38
               ||||||||||||||||||||
Sbjct: 2000645 acgcccgcgccgccgccccc 2000664
to top
>ref|XR_003386.1| PREDICTED: Mus musculus similar to sterile alpha motif domain
          containing 1 (LOC671345), mRNA
          Length = 1720

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                           
Query: 18 cacgcccgcgccgccgccccctcccgtcgccgc 50
          ||||||||| ||||||||| | |||||||||||
Sbjct: 21 cacgcccgccccgccgcccgcgcccgtcgccgc 53
to top
>ref|XM_985521.1| PREDICTED: Mus musculus similar to sterile alpha motif domain
           containing 1 (LOC666704), mRNA
          Length = 2071

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 18  cacgcccgcgccgccgccccctcccgtcgccgc 50
           ||||||||| ||||||||| | |||||||||||
Sbjct: 372 cacgcccgccccgccgcccgcgcccgtcgccgc 404
to top
>emb|CR729364.1|CNS0GPQ2 Tetraodon nigroviridis full-length cDNA
          Length = 1220

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 58  gactgacggaactcctccagg 78
           |||||||||||||||||||||
Sbjct: 479 gactgacggaactcctccagg 459
to top
>emb|CR728743.2|CNS0GP8T Tetraodon nigroviridis full-length cDNA
          Length = 1247

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 58  gactgacggaactcctccagg 78
           |||||||||||||||||||||
Sbjct: 491 gactgacggaactcctccagg 471
to top
>emb|CR725893.2|CNS0GN1N Tetraodon nigroviridis full-length cDNA
          Length = 1194

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 58  gactgacggaactcctccagg 78
           |||||||||||||||||||||
Sbjct: 465 gactgacggaactcctccagg 445
to top
>emb|CR725393.1|CNS0GMNR Tetraodon nigroviridis full-length cDNA
          Length = 1221

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 58  gactgacggaactcctccagg 78
           |||||||||||||||||||||
Sbjct: 463 gactgacggaactcctccagg 443
to top
>emb|CR725002.2|CNS0GMCW Tetraodon nigroviridis full-length cDNA
          Length = 1088

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 58  gactgacggaactcctccagg 78
           |||||||||||||||||||||
Sbjct: 447 gactgacggaactcctccagg 427
to top
>emb|CR724028.2|CNS0GLLU Tetraodon nigroviridis full-length cDNA
          Length = 1243

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 58  gactgacggaactcctccagg 78
           |||||||||||||||||||||
Sbjct: 488 gactgacggaactcctccagg 468
to top
>emb|CR724851.1|CNS0GM8P Tetraodon nigroviridis full-length cDNA
          Length = 1185

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 58  gactgacggaactcctccagg 78
           |||||||||||||||||||||
Sbjct: 472 gactgacggaactcctccagg 452
to top
>emb|CR703168.2|CNS0G5IK Tetraodon nigroviridis full-length cDNA
          Length = 1189

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 58  gactgacggaactcctccagg 78
           |||||||||||||||||||||
Sbjct: 435 gactgacggaactcctccagg 415
to top
>emb|CR686440.2|CNS0FSLW Tetraodon nigroviridis full-length cDNA
          Length = 1224

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 58  gactgacggaactcctccagg 78
           |||||||||||||||||||||
Sbjct: 466 gactgacggaactcctccagg 446
to top
>emb|AL132868.24|HSA262P20 Human DNA sequence from clone RP11-262P20 on chromosome 4, complete
             sequence
          Length = 193444

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 20    cgcccgcgccgccgccccctcccgt 44
             ||||||||||||||||||| |||||
Sbjct: 12845 cgcccgcgccgccgcccccgcccgt 12821
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 15      cagcacgcccgcgccgccgcc 35
               |||||||||||||||||||||
Sbjct: 5133298 cagcacgcccgcgccgccgcc 5133318
to top
>gb|AC132381.4| Mus musculus BAC clone RP23-424F5 from chromosome 1, complete sequence
          Length = 207002

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 23    ccgcgccgccgccccctcccg 43
             |||||||||||||||||||||
Sbjct: 86694 ccgcgccgccgccccctcccg 86674
to top
>ref|XM_347035.2| PREDICTED: Rattus norvegicus similar to mKIAA0945 protein
           (LOC362194), mRNA
          Length = 3900

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 19  acgcccgcgccgccgccccct 39
           |||||||||||||||||||||
Sbjct: 530 acgcccgcgccgccgccccct 510
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 23      ccgcgccgccgccccctcccg 43
               |||||||||||||||||||||
Sbjct: 6246733 ccgcgccgccgccccctcccg 6246753
to top
>gb|AC156028.2| Mus musculus BAC clone RP23-61A11 from chromosome 8, complete sequence
          Length = 212724

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 18     cacgcccgcgccgccgccccctcccgtcgccgc 50
              ||||||||| ||||||||| | |||||||||||
Sbjct: 164754 cacgcccgccccgccgcccgcgcccgtcgccgc 164786
to top
>ref|XM_550091.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2559

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 31  ccgccccctcccgtcgccgc 50
           ||||||||||||||||||||
Sbjct: 291 ccgccccctcccgtcgccgc 272
to top
>gb|DQ214854.1| Taeniopygia guttata clone 0063P0025G11 ubiquitin C-terminal
           hydrolase L5 (UCH37) variant 2-like mRNA, complete
           sequence
          Length = 923

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 328 atttttctcttcaagtggatgcctggag 355
           ||||||||||||||||||  ||||||||
Sbjct: 238 atttttctcttcaagtggcagcctggag 265
to top
>gb|DQ214853.1| Taeniopygia guttata clone 0063P0027D06 ubiquitin C-terminal
           hydrolase L5 (UCH37) variant 2-like mRNA, complete
           sequence
          Length = 1132

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 328 atttttctcttcaagtggatgcctggag 355
           ||||||||||||||||||  ||||||||
Sbjct: 203 atttttctcttcaagtggcagcctggag 230
to top
>ref|NM_192819.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2100

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 31 ccgccccctcccgtcgccgctgcc 54
          |||||||||||| |||||||||||
Sbjct: 30 ccgccccctcccctcgccgctgcc 53
to top
>gb|AC137606.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0004B23,
              complete sequence
          Length = 153136

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 230    agttgattcaggagatgcaa 249
              ||||||||||||||||||||
Sbjct: 117431 agttgattcaggagatgcaa 117412
to top
>gb|AC112971.8| Mus musculus chromosome 1, clone RP24-444M12, complete sequence
          Length = 161310

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 20    cgcccgcgccgccgccccctcccg 43
             ||||||||| ||||||||||||||
Sbjct: 65164 cgcccgcgcagccgccccctcccg 65141
to top
>gb|AC137624.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0680F01,
             complete sequence
          Length = 156691

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   agttgattcaggagatgcaa 249
             ||||||||||||||||||||
Sbjct: 40282 agttgattcaggagatgcaa 40263
to top
>gb|AC113084.12| Mus musculus chromosome 1, clone RP23-292F19, complete sequence
          Length = 247962

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    gcccgcgccgccgccccctc 40
             ||||||||||||||||||||
Sbjct: 22009 gcccgcgccgccgccccctc 21990
to top
>gb|AY197678.1| Elm yellows phytoplasma strain EY627 ribosomal protein S19 (rps19)
           gene, partial cds; and ribosomal protein L22 (rpl22) and
           ribosomal protein S3 (rps3) genes, complete cds
          Length = 1199

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 386 attcaggagatgcaagtaaa 405
to top
>gb|AY197677.1| Elm yellows phytoplasma strain EY626 ribosomal protein S19 (rps19)
           gene, partial cds; and ribosomal protein L22 (rpl22) and
           ribosomal protein S3 (rps3) genes, complete cds
          Length = 1199

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 386 attcaggagatgcaagtaaa 405
to top
>gb|AY197676.1| Elm yellows phytoplasma strain EY125 ribosomal protein S19 (rps19)
           gene, partial cds; and ribosomal protein L22 (rpl22) and
           ribosomal protein S3 (rps3) genes, complete cds
          Length = 1199

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 386 attcaggagatgcaagtaaa 405
to top
>gb|AY197675.1| Elm yellows phytoplasma strain EY1 ribosomal protein S19 (rps19)
           gene, partial cds; and ribosomal protein L22 (rpl22) and
           ribosomal protein S3 (rps3) genes, complete cds
          Length = 1199

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 386 attcaggagatgcaagtaaa 405
to top
>gb|AY197674.1| Hemp dogbane yellows phytoplasma strain HD1 ribosomal protein S19
           (rps19) gene, partial cds; and ribosomal protein L22
           (rpl22) and ribosomal protein S3 (rps3) genes, complete
           cds
          Length = 1199

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 386 attcaggagatgcaagtaaa 405
to top
>gb|AY197673.1| Spartium witches'-broom phytoplasma strain SpaWB251 ribosomal
           protein S19 (rps19) gene, partial cds; and ribosomal
           protein L22 (rpl22) and ribosomal protein S3 (rps3)
           genes, complete cds
          Length = 1193

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 386 attcaggagatgcaagtaaa 405
to top
>gb|AY197672.1| Spartium witches'-broom phytoplasma strain SpaWB229 ribosomal
           protein S19 (rps19) gene, partial cds; and ribosomal
           protein L22 (rpl22) and ribosomal protein S3 (rps3)
           genes, complete cds
          Length = 1193

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 386 attcaggagatgcaagtaaa 405
to top
>gb|AY197671.1| Rubus stunt phytoplasma strain RuSR19 ribosomal protein S19 (rps19)
           gene, partial cds; and ribosomal protein L22 (rpl22) and
           ribosomal protein S3 (rps3) genes, complete cds
          Length = 1200

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 386 attcaggagatgcaagtaaa 405
to top
>gb|AY197670.1| Rubus stunt phytoplasma strain RuS971 ribosomal protein S19 (rps19)
           gene, partial cds; and ribosomal protein L22 (rpl22) and
           ribosomal protein S3 (rps3) genes, complete cds
          Length = 1200

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 386 attcaggagatgcaagtaaa 405
to top
>gb|AY197669.1| Rubus stunt phytoplasma strain RuS400 ribosomal protein S19 (rps19)
           gene, partial cds; and ribosomal protein L22 (rpl22) and
           ribosomal protein S3 (rps3) genes, complete cds
          Length = 1200

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 386 attcaggagatgcaagtaaa 405
to top
>gb|AY197668.1| Rubus stunt phytoplasma strain RUS ribosomal protein S19 (rps19)
           gene, partial cds; and ribosomal protein L22 (rpl22) and
           ribosomal protein S3 (rps3) genes, complete cds
          Length = 1200

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 386 attcaggagatgcaagtaaa 405
to top
>gb|AY197667.1| Alder yellows phytoplasma strain ALY1068 ribosomal protein S19
           (rps19) gene, partial cds; and ribosomal protein L22
           (rpl22) and ribosomal protein S3 (rps3) genes, complete
           cds
          Length = 1199

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 386 attcaggagatgcaagtaaa 405
to top
>gb|AY197666.1| Alder yellows phytoplasma strain ALY ribosomal protein S19 (rps19)
           gene, partial cds; and ribosomal protein L22 (rpl22) and
           ribosomal protein S3 (rps3) genes, complete cds
          Length = 1199

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 386 attcaggagatgcaagtaaa 405
to top
>gb|AY197665.1| Flavescence doree phytoplasma strain FD-C ribosomal protein S19
           (rps19) gene, partial cds; and ribosomal protein L22
           (rpl22) and ribosomal protein S3 (rps3) genes, complete
           cds
          Length = 1198

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 386 attcaggagatgcaagtaaa 405
to top
>gb|AY197664.1| Flavescence doree phytoplasma strain FD-D ribosomal protein S19
           (rps19) gene, partial cds; and ribosomal protein L22
           (rpl22) and ribosomal protein S3 (rps3) genes, complete
           cds
          Length = 1198

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 386 attcaggagatgcaagtaaa 405
to top
>gb|AY197663.1| Flavescence doree phytoplasma strain FD70 ribosomal protein S19
           (rps19) gene, partial cds; and ribosomal protein L22
           (rpl22) and ribosomal protein S3 (rps3) genes, complete
           cds
          Length = 1198

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 386 attcaggagatgcaagtaaa 405
to top
>gb|AY197662.1| Alder yellows phytoplasma strain ALY882 ribosomal protein S19
           (rps19) gene, partial cds; and ribosomal protein L22
           (rpl22) and ribosomal protein S3 (rps3) genes, complete
           cds
          Length = 1198

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 386 attcaggagatgcaagtaaa 405
to top
>gb|AC137967.14| Mus musculus chromosome 10, clone RP24-323I24, complete sequence
          Length = 199669

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 318    gtatgggttaatttttctct 337
              ||||||||||||||||||||
Sbjct: 135253 gtatgggttaatttttctct 135234
to top
>gb|AF385627.1| Flavescence doree phytoplasma ribosomal protein L22 gene, partial
           cds; and ribosomal protein S3 gene, complete cds
          Length = 826

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 47  attcaggagatgcaagtaaa 66
to top
>gb|AC098712.3| Mus musculus BAC clone RP23-2A21 from 10, complete sequence
          Length = 205054

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   gtatgggttaatttttctct 337
             ||||||||||||||||||||
Sbjct: 63926 gtatgggttaatttttctct 63907
to top
>ref|NM_010250.2| Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit alpha
            1 (Gabra1), mRNA
          Length = 4150

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  aatttttctcttcaagtgga 346
            ||||||||||||||||||||
Sbjct: 1528 aatttttctcttcaagtgga 1509
to top
>gb|AF396938.1| Elm yellows phytoplasma ribosomal protein S3 (rps3) gene, complete
           cds
          Length = 825

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 47  attcaggagatgcaagtaaa 66
to top
>gb|AF396937.1| Flavescence doree phytoplasma strain AT4 ribosomal protein S3
           (rps3) gene, complete cds
          Length = 825

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 47  attcaggagatgcaagtaaa 66
to top
>gb|AF396936.1| Alder yellows phytoplasma ribosomal protein S3 (rps3) gene,
           complete cds
          Length = 825

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 47  attcaggagatgcaagtaaa 66
to top
>gb|AF396951.1| Flavescence doree phytoplasma strain VR2 ribosomal protein S3
           (rps3) gene, complete cds
          Length = 825

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 47  attcaggagatgcaagtaaa 66
to top
>gb|AF396950.1| Flavescence doree phytoplasma ribosomal protein S3 (rps3) gene,
           complete cds
          Length = 825

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 47  attcaggagatgcaagtaaa 66
to top
>gb|AF396949.1| Elm witches'-broom phytoplasma ribosomal protein S3 (rps3) gene,
           complete cds
          Length = 825

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 47  attcaggagatgcaagtaaa 66
to top
>gb|AF396948.1| Flavescence doree phytoplasma strain PN6 ribosomal protein S3
           (rps3) gene, complete cds
          Length = 825

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 47  attcaggagatgcaagtaaa 66
to top
>gb|AF396947.1| Flavescence doree phytoplasma strain TV51 ribosomal protein S3
           (rps3) gene, complete cds
          Length = 825

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 47  attcaggagatgcaagtaaa 66
to top
>gb|AF396946.1| Flavescence doree phytoplasma strain TV46 ribosomal protein S3
           (rps3) gene, complete cds
          Length = 825

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 47  attcaggagatgcaagtaaa 66
to top
>gb|AF396945.1| Flavescence doree phytoplasma strain AL202 ribosomal protein S3
           (rps3) gene, complete cds
          Length = 825

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 47  attcaggagatgcaagtaaa 66
to top
>gb|AF396944.1| Rubus stunt phytoplasma ribosomal protein S3 (rps3) gene, complete
           cds
          Length = 825

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 47  attcaggagatgcaagtaaa 66
to top
>gb|AF396943.1| Flavescence doree phytoplasma strain PC2 ribosomal protein S3
           (rps3) gene, complete cds
          Length = 825

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 47  attcaggagatgcaagtaaa 66
to top
>gb|AF396942.1| Flavescence doree phytoplasma strain PV259 ribosomal protein S3
           (rps3) gene, complete cds
          Length = 825

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 47  attcaggagatgcaagtaaa 66
to top
>gb|AF396940.1| Flavescence doree phytoplasma strain FD88 ribosomal protein S3
           (rps3) gene, complete cds
          Length = 825

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 47  attcaggagatgcaagtaaa 66
to top
>gb|AF396939.1| Flavescence doree phytoplasma strain FD70 ribosomal protein S3
           (rps3) gene, complete cds
          Length = 825

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 attcaggagatgcaagtaaa 254
           ||||||||||||||||||||
Sbjct: 47  attcaggagatgcaagtaaa 66
to top
>gb|BT009226.1| Triticum aestivum clone wle1n.pk0085.f11:fis, full insert mRNA
           sequence
          Length = 1123

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  ccgcgccgccgccccctccc 42
           ||||||||||||||||||||
Sbjct: 113 ccgcgccgccgccccctccc 132
to top
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    cacgcccgcgccgccgcccc 37
             ||||||||||||||||||||
Sbjct: 35766 cacgcccgcgccgccgcccc 35785
to top
>emb|AL645752.9| Mouse DNA sequence from clone RP23-244K22 on chromosome 11 Contains
            the 5' end of the Gabra1 gene for gamma-aminobutyric acid
            (GABA-A) receptor, subunit alpha 1, complete sequence
          Length = 116840

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 327  aatttttctcttcaagtgga 346
            ||||||||||||||||||||
Sbjct: 9718 aatttttctcttcaagtgga 9737
to top
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 20      cgcccgcgccgccgccccctcccg 43
               ||||| ||||||||||||||||||
Sbjct: 1959486 cgcccccgccgccgccccctcccg 1959463
to top
>gb|AC100786.2| Homo sapiens chromosome 17, clone CTD-2514K5, complete sequence
          Length = 177163

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 339    caagtggatgcctggaggaa 358
              ||||||||||||||||||||
Sbjct: 139112 caagtggatgcctggaggaa 139131
to top
>dbj|AK141596.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched
            library, clone:C630037M06 product:gamma-aminobutyric acid
            (GABA-A) receptor, subunit alpha 1, full insert sequence
          Length = 4542

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  aatttttctcttcaagtgga 346
            ||||||||||||||||||||
Sbjct: 1387 aatttttctcttcaagtgga 1368
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     acgcccgcgccgccgccccc 38
              ||||||||||||||||||||
Sbjct: 597195 acgcccgcgccgccgccccc 597214
to top
>gb|AC157804.7| Mus musculus chromosome 1, clone RP24-318G19, complete sequence
          Length = 180563

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 20     cgcccgcgccgccgccccctcccg 43
              ||||||||| ||||||||||||||
Sbjct: 137890 cgcccgcgcagccgccccctcccg 137867
to top
>gb|AC137898.6| Homo sapiens chromosome 17, clone RP11-101O21, complete sequence
          Length = 133040

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    caagtggatgcctggaggaa 358
              ||||||||||||||||||||
Sbjct: 130131 caagtggatgcctggaggaa 130112
to top
>dbj|AK039496.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length
           enriched library, clone:A330050J23
           product:gamma-aminobutyric acid (GABA-A) receptor,
           subunit alpha 1, full insert sequence
          Length = 2400

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 327 aatttttctcttcaagtgga 346
           ||||||||||||||||||||
Sbjct: 811 aatttttctcttcaagtgga 792
to top
>gb|U96172.1|COU96172 Crithidia oncopelti mini-exon gene repeat
          Length = 763

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 141 ttcgcctccctcgctcgctgctgc 164
           |||||||| |||||||||||||||
Sbjct: 229 ttcgcctcgctcgctcgctgctgc 206
to top
>dbj|AK090121.1| Mus musculus bone marrow stroma cell CRL-2028 SR-4987 cDNA, RIKEN
           full-length enriched library, clone:G431001G23
           product:unclassifiable, full insert sequence
          Length = 8936

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  ccgcgccgccgccccctccc 42
           ||||||||||||||||||||
Sbjct: 219 ccgcgccgccgccccctccc 238
to top
>dbj|AK034095.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched
            library, clone:9330156B19 product:gamma-aminobutyric acid
            (GABA-A) receptor, subunit alpha 1, full insert sequence
          Length = 4150

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  aatttttctcttcaagtgga 346
            ||||||||||||||||||||
Sbjct: 1528 aatttttctcttcaagtgga 1509
to top
>gb|AC129563.14| Mus musculus chromosome 15, clone RP23-223M20, complete sequence
          Length = 175021

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    ccgcgccgccgccccctccc 42
             ||||||||||||||||||||
Sbjct: 76421 ccgcgccgccgccccctccc 76402
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 31       ccgccccctcccgtcgccgctgcc 54
                |||||||||||| |||||||||||
Sbjct: 24619149 ccgccccctcccctcgccgctgcc 24619126



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 31      ccgccccctcccgtcgccgc 50
               ||||||||||||||||||||
Sbjct: 2260790 ccgccccctcccgtcgccgc 2260771
to top
>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1040D09
          Length = 148102

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 31    ccgccccctcccgtcgccgctgcc 54
             |||||||||||| |||||||||||
Sbjct: 45112 ccgccccctcccctcgccgctgcc 45089
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 17      gcacgcccgcgccgccgccc 36
               ||||||||||||||||||||
Sbjct: 8449917 gcacgcccgcgccgccgccc 8449936
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 17      gcacgcccgcgccgccgccc 36
               ||||||||||||||||||||
Sbjct: 4433741 gcacgcccgcgccgccgccc 4433722



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     gcacgcccgcgccgccgccc 36
              ||||||||||||||||||||
Sbjct: 822163 gcacgcccgcgccgccgccc 822182
to top
>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0019D06
          Length = 167405

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    ccgccccctcccgtcgccgc 50
             ||||||||||||||||||||
Sbjct: 44374 ccgccccctcccgtcgccgc 44355
to top
>gb|AC116691.12| Mus musculus chromosome 1, clone RP24-312I13, complete sequence
          Length = 154587

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    ccgcgccgccgccccctccc 42
             ||||||||||||||||||||
Sbjct: 23073 ccgcgccgccgccccctccc 23092
to top
>emb|BX537133.3| Zebrafish DNA sequence from clone DKEY-90M5 in linkage group 20, complete
              sequence
          Length = 249791

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 145    cctccctcgctcgctgctgcgccg 168
              |||||| |||||||||||||||||
Sbjct: 223712 cctcccccgctcgctgctgcgccg 223735
to top
>emb|AL121768.4|CNS01DSB Human chromosome 14 DNA sequence BAC R-976B16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 213239

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 27     gccgccgccccctcccgtcgccgc 50
              ||||||||| ||||||||||||||
Sbjct: 172041 gccgccgccgcctcccgtcgccgc 172018
to top
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     acgcccgcgccgccgccccc 38
              ||||||||||||||||||||
Sbjct: 482660 acgcccgcgccgccgccccc 482679
to top
>gb|AC145913.3| Gallus gallus BAC clone CH261-50N9 from chromosome unknown, complete
              sequence
          Length = 182816

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 22     cccgcgccgccgccccctcccgtc 45
              |||||||||||||||| |||||||
Sbjct: 135614 cccgcgccgccgccccatcccgtc 135637
to top
>gb|M86566.1|MUSGABA1A Mouse GABA-A receptor alpha-1 subunit mRNA, complete cds
          Length = 1728

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 327 aatttttctcttcaagtgga 346
           ||||||||||||||||||||
Sbjct: 895 aatttttctcttcaagtgga 876
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 32     cgccccctcccgtcgccgctgccg 55
              |||||||||||| |||||||||||
Sbjct: 228584 cgccccctcccgccgccgctgccg 228561
to top
>gb|S70397.1|S70397 {FRA16A, folate-sensitive fragile site} [human, Genomic, 160 nt]
          Length = 160

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 26 cgccgccgccccctcccgtcgccgctgc 53
          |||||||||| |||| ||||||||||||
Sbjct: 43 cgccgccgccgcctcgcgtcgccgctgc 70
to top
>emb|X61430.1|MMGABAA1S M.musculus mRNA for GABA-A receptor alpha 1 subunit
          Length = 1555

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 327 aatttttctcttcaagtgga 346
           ||||||||||||||||||||
Sbjct: 783 aatttttctcttcaagtgga 764
to top
>gb|M63436.1|MUSGABAAS Mouse GABA-a/benzodiazepine (GABA-a/BZ) receptor alpha-1 subunit mRNA
          Length = 2664

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  aatttttctcttcaagtgga 346
            ||||||||||||||||||||
Sbjct: 1200 aatttttctcttcaagtgga 1181


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,601,354
Number of Sequences: 3902068
Number of extensions: 3601354
Number of successful extensions: 79232
Number of sequences better than 10.0: 139
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77818
Number of HSP's gapped (non-prelim): 1414
length of query: 479
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 457
effective length of database: 17,147,199,772
effective search space: 7836270295804
effective search space used: 7836270295804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top