Clone Name | bart08g03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | 5NG4_PINTA (Q6J163) Auxin-induced protein 5NG4 | 35 | 0.10 | 2 | NOTC1_RAT (Q07008) Neurogenic locus notch homolog protein 1 prec... | 30 | 3.3 | 3 | NOTC1_MOUSE (Q01705) Neurogenic locus notch homolog protein 1 pr... | 30 | 3.3 | 4 | PPDK_GIALA (P51776) Pyruvate, phosphate dikinase (EC 2.7.9.1) (P... | 30 | 5.6 |
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>5NG4_PINTA (Q6J163) Auxin-induced protein 5NG4| Length = 410 Score = 35.4 bits (80), Expect = 0.10 Identities = 37/134 (27%), Positives = 54/134 (40%), Gaps = 1/134 (0%) Frame = +1 Query: 139 ERHKPCVAMVLVQLFYSLVDMALKTAYGLGMRPIVFVAYRQGIXXXXXXXXXXXXRGLTL 318 ER K AM+ +Q Y+ + + A +G+ +VF YR I Sbjct: 15 ERVKLHAAMLALQFGYAGFHIVSRAALNMGVSKVVFPVYRN-ILALMLIGPCAYFLEKKE 73 Query: 319 RPMAVGPRXXXXXXXXXXXXXTGQY-FYFMGLHLASPSMARATTNLAPGITFAIAAVIGL 495 RP A+ TGQ + + L P+ A A N P ITF +AA + L Sbjct: 74 RP-ALTLSFLIQFFLLALCGITGQSRILSLRIVLHIPTFASAIQNSVPAITFIMAAALRL 132 Query: 496 EKVDLRSSRSIAQI 537 EKV + +A+I Sbjct: 133 EKVHISRRDGLAKI 146
>NOTC1_RAT (Q07008) Neurogenic locus notch homolog protein 1 precursor (Notch 1)| [Contains: Notch 1 extracellular truncation; Notch 1 intracellular domain] Length = 2531 Score = 30.4 bits (67), Expect = 3.3 Identities = 10/22 (45%), Positives = 17/22 (77%) Frame = +1 Query: 37 WLPRVRRGGIPGQWSLLAPGIS 102 WLPR++ G +P Q++ L PG++ Sbjct: 2300 WLPRLQNGMVPSQYNPLRPGVT 2321
>NOTC1_MOUSE (Q01705) Neurogenic locus notch homolog protein 1 precursor (Notch 1)| (Motch A) (mT14) (p300) [Contains: Notch 1 extracellular truncation; Notch 1 intracellular domain] Length = 2531 Score = 30.4 bits (67), Expect = 3.3 Identities = 10/22 (45%), Positives = 17/22 (77%) Frame = +1 Query: 37 WLPRVRRGGIPGQWSLLAPGIS 102 WLPR++ G +P Q++ L PG++ Sbjct: 2300 WLPRLQNGMVPSQYNPLRPGVT 2321
>PPDK_GIALA (P51776) Pyruvate, phosphate dikinase (EC 2.7.9.1) (Pyruvate,| orthophosphate dikinase) Length = 884 Score = 29.6 bits (65), Expect = 5.6 Identities = 10/20 (50%), Positives = 16/20 (80%) Frame = -1 Query: 228 AEPVGRLERHVHQRVEELHQ 169 AE + + RH+H+RVE+LH+ Sbjct: 647 AEDMNKKHRHIHERVEDLHE 666 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,717,812 Number of Sequences: 219361 Number of extensions: 557685 Number of successful extensions: 1803 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1724 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1801 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4200495993 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)