ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart08g01 |
|---|---|
| Clone Library Name | barley_pub |
>ATPO_IPOBA (P22778) ATP synthase delta chain, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 244 Score = 137 bits (346), Expect = 2e-32 Identities = 71/123 (57%), Positives = 84/123 (68%) Frame = +1 Query: 199 ENKIKVPKALYGGTGXYXXXXXXXXXXXXXXEKVESEIGDVVGAVKKSPMFSQFIKDSSV 378 E KIKVP +YG +G Y EKVESE+ D+V A KKSP FSQF++D SV Sbjct: 53 EQKIKVPLTMYGVSGNYASALYLAAVKSNTLEKVESELYDLVEASKKSPTFSQFMRDPSV 112 Query: 379 PKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLKFVERIAERFVDLTMAHRGEVKVVV 558 P TRV A+ EI A+AKF D TQNFL +LA NGRLK ++RI +RF +LTMAHRGEVK V Sbjct: 113 PVDTRVNAIKEICAQAKFGDTTQNFLLILAENGRLKHIDRIVKRFKELTMAHRGEVKATV 172 Query: 559 RTV 567 TV Sbjct: 173 TTV 175
>ATPO_ARATH (Q96251) ATP synthase delta chain, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 238 Score = 111 bits (278), Expect = 1e-24 Identities = 63/167 (37%), Positives = 99/167 (59%), Gaps = 6/167 (3%) Frame = +1 Query: 85 ARHLRSGLPLLXARLAATESAAVAQVS------RGLATXVDKPAENKIKVPKALYGGTGX 246 A RSG+ +A T+S + + R AT + N +KVP AL G G Sbjct: 2 ANRFRSGISFFKT-IAVTDSVSSVRSKSLFPALRTYATASAQTTAN-VKVPIALVGENGN 59 Query: 247 YXXXXXXXXXXXXXXEKVESEIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEA 426 + EK+E+++ +++ A+K +P+F+QF KD SVP+ TR+ A+ + +A Sbjct: 60 FASWLYIAAVKMNSLEKIETDLSEMIEAMKTAPIFAQFTKDPSVPRGTRLAAIRDACDQA 119 Query: 427 KFSDITQNFLSVLASNGRLKFVERIAERFVDLTMAHRGEVKVVVRTV 567 KF++ T+NFLS+LA NG+LK ++ I ++F+ LT AHRG+VKV+V TV Sbjct: 120 KFAEPTKNFLSLLAENGKLKNLDAIVKKFMQLTNAHRGDVKVLVTTV 166
>ATPO_BOVIN (P13621) ATP synthase O subunit, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 213 Score = 75.1 bits (183), Expect = 1e-13 Identities = 43/146 (29%), Positives = 73/146 (50%) Frame = +1 Query: 127 LAATESAAVAQVSRGLATXVDKPAENKIKVPKALYGGTGXYXXXXXXXXXXXXXXEKVES 306 +AA + ++Q R +T V +P ++ P +YG G Y E+VE Sbjct: 1 MAALAVSGLSQQVRCFSTSVVRPFAKLVRPPVQIYGIEGRYATALYSAASKQNKLEQVEK 60 Query: 307 EIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLK 486 E+ V G + K P + + + V ++ +VK+++++ A+ KFS +T N +++LA NGRL Sbjct: 61 ELLRV-GQILKEPKMAASLLNPYVKRSVKVKSLSDMTAKEKFSPLTSNLINLLAENGRLT 119 Query: 487 FVERIAERFVDLTMAHRGEVKVVVRT 564 + F + HRGEV V T Sbjct: 120 NTPAVISAFSTMMSVHRGEVPCTVTT 145
>ATPO_RAT (Q06647) ATP synthase O subunit, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 213 Score = 72.8 bits (177), Expect = 6e-13 Identities = 41/146 (28%), Positives = 73/146 (50%) Frame = +1 Query: 127 LAATESAAVAQVSRGLATXVDKPAENKIKVPKALYGGTGXYXXXXXXXXXXXXXXEKVES 306 +AA ++ +++ R +T V +P ++ P +YG G Y ++VE Sbjct: 1 MAAPATSVLSRQVRSFSTSVVRPFSKLVRPPVQVYGIEGRYATALYSAASKQKRLDQVEK 60 Query: 307 EIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLK 486 E+ V G + K P S + + + ++ +VK++ +I + KFS +T N +++LA NGRL Sbjct: 61 ELLRV-GQLLKDPKVSLAVLNPYIKRSIKVKSLKDITTKEKFSPLTANLMNLLAENGRLG 119 Query: 487 FVERIAERFVDLTMAHRGEVKVVVRT 564 + + F + HRGEV V T Sbjct: 120 NTQGVISAFSTIMSVHRGEVPCTVTT 145
>ATPO_MOUSE (Q9DB20) ATP synthase O subunit, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 213 Score = 72.4 bits (176), Expect = 8e-13 Identities = 42/146 (28%), Positives = 71/146 (48%) Frame = +1 Query: 127 LAATESAAVAQVSRGLATXVDKPAENKIKVPKALYGGTGXYXXXXXXXXXXXXXXEKVES 306 +AA ++ +++ R +T V +P ++ P +YG G Y ++VE Sbjct: 1 MAAPAASGLSRQVRSFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKEKKLDQVEK 60 Query: 307 EIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLK 486 E+ V G + K P S + + + + +VK++ +I KFS +T N +++LA NGRL Sbjct: 61 ELLRV-GQLLKDPKVSLAVLNPYIKRTVKVKSLNDITKREKFSPLTANLMNLLAENGRLG 119 Query: 487 FVERIAERFVDLTMAHRGEVKVVVRT 564 + I F + HRGEV V T Sbjct: 120 NTQGIISAFSTIMSVHRGEVPCTVTT 145
>ATPO_HUMAN (P48047) ATP synthase O subunit, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 213 Score = 69.7 bits (169), Expect = 5e-12 Identities = 40/144 (27%), Positives = 71/144 (49%) Frame = +1 Query: 127 LAATESAAVAQVSRGLATXVDKPAENKIKVPKALYGGTGXYXXXXXXXXXXXXXXEKVES 306 +AA + +++ R +T V +P ++ P +YG G Y E+VE Sbjct: 1 MAAPAVSGLSRQVRCFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKQNKLEQVEK 60 Query: 307 EIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLK 486 E+ V + K P + + + V ++ +VK++ +I A+ +FS +T N +++LA NGRL Sbjct: 61 ELLRVA-QILKEPKVAASVLNPYVKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLS 119 Query: 487 FVERIAERFVDLTMAHRGEVKVVV 558 + + F + HRGEV V Sbjct: 120 NTQGVVSAFSTMMSVHRGEVPCTV 143
>ATPO_PONPY (Q5RD23) ATP synthase O subunit, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 213 Score = 68.9 bits (167), Expect = 9e-12 Identities = 40/144 (27%), Positives = 71/144 (49%) Frame = +1 Query: 127 LAATESAAVAQVSRGLATXVDKPAENKIKVPKALYGGTGXYXXXXXXXXXXXXXXEKVES 306 +A + +++ R +T V +P ++ P +YG G Y E+VE Sbjct: 1 MATPAVSGLSRQVRCFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKQNKLEQVEK 60 Query: 307 EIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLK 486 E+ V + K P + + + V ++ +VK++ +I A+ +FS +T N +++LA NGRL Sbjct: 61 ELLRVA-QILKEPKVAAPVLNPYVKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLS 119 Query: 487 FVERIAERFVDLTMAHRGEVKVVV 558 + + F + AHRGEV V Sbjct: 120 NTQGVVSAFSTMMSAHRGEVPCTV 143
>ATPO_DROME (Q24439) ATP synthase O subunit, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 209 Score = 58.5 bits (140), Expect = 1e-08 Identities = 34/138 (24%), Positives = 63/138 (45%) Frame = +1 Query: 151 VAQVSRGLATXVDKPAENKIKVPKALYGGTGXYXXXXXXXXXXXXXXEKVESEIGDVVGA 330 +A +SR L++ A+ +K P ++G G Y ++VE ++ + Sbjct: 7 LALLSRTLSSAA---AQATVKPPVQVFGLEGRYATALYSAASKLSQLDQVEKDLTALQAT 63 Query: 331 VKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLKFVERIAER 510 ++ +++ + K A+ E + +F+ T N L +LA NGRLK ++ + Sbjct: 64 IRSDKKLREYVTSPIINKKVMATALKEASEKLRFAPATVNLLGLLADNGRLKKLDTVINA 123 Query: 511 FVDLTMAHRGEVKVVVRT 564 + + AHRGEV V T Sbjct: 124 YKTIMAAHRGEVVCEVVT 141
>ATPO_NEUCR (Q9P602) ATP synthase subunit 5, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) (ATP synthase chain 5) Length = 220 Score = 56.6 bits (135), Expect = 5e-08 Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 1/122 (0%) Frame = +1 Query: 196 AENKIKVPKALYGGTGXYXXXXXXXXXXXXXXEKVESEIGDVVGAVKKSPMFSQFIKDSS 375 A +K+K P L+G G Y E I + + K P + ++ + Sbjct: 27 ASSKVKPPVTLFGLDGTYATALYTAAVKTSALEPTAKAISSLGNLLAKDPKLASILETPT 86 Query: 376 VPKATRVKAVTEIFAEAKFSDIT-QNFLSVLASNGRLKFVERIAERFVDLTMAHRGEVKV 552 + A + V E+ S+ T +NFL+ LA N RL + + +F +L A RGEV++ Sbjct: 87 LSPADKSAIVAELQKSVGVSNETVKNFLATLAENNRLGLLPSVVAKFSELMSAARGEVEM 146 Query: 553 VV 558 VV Sbjct: 147 VV 148
>ATPO_SCHPO (O74479) ATP synthase subunit 5, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) (ATP synthase chain 5) Length = 216 Score = 53.1 bits (126), Expect = 5e-07 Identities = 30/114 (26%), Positives = 51/114 (44%) Frame = +1 Query: 217 PKALYGGTGXYXXXXXXXXXXXXXXEKVESEIGDVVGAVKKSPMFSQFIKDSSVPKATRV 396 P LYG G Y + VE + + G +++ P F Q+I + + + Sbjct: 33 PVQLYGLDGSYASSLYTAAVKESKLDNVEKALNKLSGVLQQRPEFEQYISSPWLTREDKK 92 Query: 397 KAVTEIFAEAKFSDITQNFLSVLASNGRLKFVERIAERFVDLTMAHRGEVKVVV 558 V+ + + +NF +VL N RL + RI ++F L A RGE++V + Sbjct: 93 ILVSSLTQMTGNEPLLKNFYNVLLDNHRLYLLTRIQKQFSTLMRAKRGEIEVKI 146
>ATPO_KLULA (O74190) ATP synthase subunit 5, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) (ATP synthase chain 5) Length = 206 Score = 52.0 bits (123), Expect = 1e-06 Identities = 33/134 (24%), Positives = 52/134 (38%) Frame = +1 Query: 163 SRGLATXVDKPAENKIKVPKALYGGTGXYXXXXXXXXXXXXXXEKVESEIGDVVGAVKKS 342 SR + A+ +K P L+G G Y E S + + V K Sbjct: 3 SRVFVRSMAASAKAGVKPPVQLFGLDGTYATALFTAASKTTSVEAAASSLNALKETVAKD 62 Query: 343 PMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLKFVERIAERFVDL 522 + +++ ++ R V + + QN L VLA N RL +E + +F L Sbjct: 63 TKLTSILENPALSAEDRNIVVDTLSKKINLDQSVQNLLKVLAENNRLSLLEHVTSQFSKL 122 Query: 523 TMAHRGEVKVVVRT 564 T A+ G V+ V T Sbjct: 123 TDAYHGLVQATVTT 136
>ATPO_ASHGO (Q75EZ3) ATP synthase subunit 5, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) (ATP synthase chain 5) Length = 207 Score = 50.8 bits (120), Expect = 3e-06 Identities = 33/135 (24%), Positives = 51/135 (37%), Gaps = 1/135 (0%) Frame = +1 Query: 163 SRGLATXVDKPAENKIKVPKALYGGTGXYXXXXXXXXXXXXXXEKVESEIGDVVGAVKKS 342 SR + A+ +K P L+G G Y E + + + K Sbjct: 3 SRVFVRSLAAAAKAGVKPPIQLFGLEGTYASALFTAASKTTSIESAGKALASLSKTIAKD 62 Query: 343 PMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDIT-QNFLSVLASNGRLKFVERIAERFVD 519 + + ++P R V + + D QN + VLA N RL ++ +A F Sbjct: 63 AKLGAILANPALPAGDRTVVVQTLAQKTPGMDAAVQNLMQVLAENNRLNLLQGVAGEFTK 122 Query: 520 LTMAHRGEVKVVVRT 564 LT AH G V+ V T Sbjct: 123 LTDAHNGLVQATVTT 137
>ATPO_CANGA (Q6FSD5) ATP synthase subunit 5, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) (ATP synthase chain 5) Length = 207 Score = 44.7 bits (104), Expect = 2e-04 Identities = 30/135 (22%), Positives = 51/135 (37%), Gaps = 1/135 (0%) Frame = +1 Query: 163 SRGLATXVDKPAENKIKVPKALYGGTGXYXXXXXXXXXXXXXXEKVESEIGDVVGAVKKS 342 SR A+ +K P L+G G Y E S + + +K+ Sbjct: 3 SRVFVRAASNAAKAGVKPPVKLFGVEGTYASALFTAASKETSVESASSSLVKLSSLIKED 62 Query: 343 PMFSQFIKDSSVPKATRVKAVTEIF-AEAKFSDITQNFLSVLASNGRLKFVERIAERFVD 519 +++ ++ R V + + A N L VLA N +L ++I+ +F Sbjct: 63 AKLKHIMENPALSTKDRAVVVDSLVKSSANLDKPVVNLLKVLAENNKLGLFDKISSQFSI 122 Query: 520 LTMAHRGEVKVVVRT 564 L AH G ++ V T Sbjct: 123 LNDAHNGLIRGSVTT 137
>ATPO_YEAST (P09457) ATP synthase subunit 5, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) (ATP synthase chain 5) Length = 212 Score = 41.2 bits (95), Expect = 0.002 Identities = 31/115 (26%), Positives = 43/115 (37%), Gaps = 1/115 (0%) Frame = +1 Query: 217 PKALYGGTGXYXXXXXXXXXXXXXXEKVESEIGDVVGAVKKSPMFSQFIKDSSVPKATRV 396 P L+G G Y + + V VKK+P + + ++ R Sbjct: 26 PVRLFGVEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNPALSLKDRN 85 Query: 397 KAVTEIFAEAKFSD-ITQNFLSVLASNGRLKFVERIAERFVDLTMAHRGEVKVVV 558 + I K D N L VL+ N RL E+IA F L AH G +K V Sbjct: 86 SVIDAIVETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLKGTV 140
>ATPD_RHORU (P05438) ATP synthase delta chain (EC 3.6.3.14)| Length = 186 Score = 36.2 bits (82), Expect = 0.067 Identities = 22/85 (25%), Positives = 44/85 (51%) Frame = +1 Query: 292 EKVESEIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLAS 471 ++V +++ + + +S + I + + + KA+T + +A F +I +NFL V+A+ Sbjct: 30 DQVSADLRSLKAMLDESGDLRRVIASPVIGRDDQRKALTALAEKAGFHEIVRNFLGVVAA 89 Query: 472 NGRLKFVERIAERFVDLTMAHRGEV 546 R V + F++ A RGEV Sbjct: 90 KHRSFAVPGMIGAFLERLAARRGEV 114
>ATPD_OCHNE (Q40610) ATP synthase delta chain, chloroplast (EC 3.6.3.14)| Length = 179 Score = 35.8 bits (81), Expect = 0.088 Identities = 14/57 (24%), Positives = 37/57 (64%) Frame = +1 Query: 355 QFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLKFVERIAERFVDLT 525 +F+ + + + + + ++ E + S ++ NFL +L + GR+ F+++IA++F++L+ Sbjct: 46 KFLGNPLITRERKKNVLKDVLGE-QISSVSLNFLMLLVNRGRVAFLDKIAQKFLELS 101
>POLG_CSFVB (P21530) Genome polyprotein [Contains: N-terminal protease (EC| 3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Nonstructural protein 2 Length = 3898 Score = 32.7 bits (73), Expect = 0.74 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 1/85 (1%) Frame = +1 Query: 304 SEIGDVVGA-VKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGR 480 + +G V G VK P+F Q D P R A E F EA+F ++T+ V S+G+ Sbjct: 73 NHLGPVSGIYVKPGPVFYQ---DYMGPVYHR--APLEFFDEAQFCEVTKRIGRVTGSDGK 127 Query: 481 LKFVERIAERFVDLTMAHRGEVKVV 555 L + + + L +A RGE + + Sbjct: 128 LYHIYVCIDGCILLKLAKRGEPRTL 152
>MRAW_SALTI (Q8Z9H4) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 313 Score = 31.2 bits (69), Expect = 2.2 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 9/79 (11%) Frame = +1 Query: 307 EIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQ---NFLSVLASNG 477 E+ +VV A +KD ATR I+ ++ +I Q + LSVLAS G Sbjct: 182 ELAEVVAAATP-------VKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLASGG 234 Query: 478 RLKFV------ERIAERFV 516 RL + +RI +RF+ Sbjct: 235 RLSIISFHSLEDRIVKRFM 253
>ATPD_STRR6 (P0A2Z5) ATP synthase delta chain (EC 3.6.3.14)| Length = 178 Score = 30.8 bits (68), Expect = 2.8 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 12/93 (12%) Frame = +1 Query: 292 EKVESEIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLAS 471 +++ S++ + V+K+ + S F+K +V ++ + K + F + S + QNF+ VLA Sbjct: 27 DRIFSDLTQIKQVVEKTGLPS-FLKQVAVDESDKEKTIA--FFQDSVSPLLQNFIQVLAY 83 Query: 472 NGR-----------LKFVERIAERF-VDLTMAH 534 N R L +E+ RF V +T AH Sbjct: 84 NHRANLFYDVLVDCLNRLEKETNRFEVTITSAH 116
>ATPD_STRPN (P0A2Z4) ATP synthase delta chain (EC 3.6.3.14)| Length = 178 Score = 30.8 bits (68), Expect = 2.8 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 12/93 (12%) Frame = +1 Query: 292 EKVESEIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLAS 471 +++ S++ + V+K+ + S F+K +V ++ + K + F + S + QNF+ VLA Sbjct: 27 DRIFSDLTQIKQVVEKTGLPS-FLKQVAVDESDKEKTIA--FFQDSVSPLLQNFIQVLAY 83 Query: 472 NGR-----------LKFVERIAERF-VDLTMAH 534 N R L +E+ RF V +T AH Sbjct: 84 NHRANLFYDVLVDCLNRLEKETNRFEVTITSAH 116
>RASA3_BOVIN (Q28013) Ras GTPase-activating protein 3 (GAP1(IP4BP)) (Ins| P4-binding protein) Length = 834 Score = 30.8 bits (68), Expect = 2.8 Identities = 13/33 (39%), Positives = 22/33 (66%) Frame = +1 Query: 382 KATRVKAVTEIFAEAKFSDITQNFLSVLASNGR 480 K + + A E F E K++D +NFL +++S+GR Sbjct: 534 KESYMAAFYEFFNEQKYADAVKNFLDLISSSGR 566
>ATPD_SORBI (Q07300) ATP synthase delta chain, chloroplast precursor (EC| 3.6.3.14) Length = 247 Score = 30.8 bits (68), Expect = 2.8 Identities = 29/148 (19%), Positives = 58/148 (39%), Gaps = 2/148 (1%) Frame = +1 Query: 130 AATESAAVAQVSRGLATXVDKPAENK--IKVPKALYGGTGXYXXXXXXXXXXXXXXEKVE 303 AA SA+ A+ +RGL + P + + P+A Y E+ Sbjct: 28 AAPRSASFARAARGLPSLRLAPPRRRGDLVRPRA-EAAADSYASALSEVAVENGTLEQTV 86 Query: 304 SEIGDVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRL 483 S++ + + + ++F + +VP+ + + EI + NF++V+ N R Sbjct: 87 SDL-EKLQKIFADETVAEFFDNPTVPREEKTALIDEIAKSYELQPHVVNFINVVVDNFRA 145 Query: 484 KFVERIAERFVDLTMAHRGEVKVVVRTV 567 + I F ++ + G V +V Sbjct: 146 TILPEIVVEFENIFNSLTGTEVATVTSV 173
>SEC10_YEAST (Q06245) Exocyst complex component SEC10| Length = 871 Score = 30.4 bits (67), Expect = 3.7 Identities = 17/58 (29%), Positives = 28/58 (48%) Frame = +1 Query: 322 VGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLKFVE 495 V +K + S ++ SS+PK K V E ++E +++ +NF S N K E Sbjct: 196 VKLMKNLLILSSKLETSSIPKTINTKLVIEKYSEMMENELLENFNSAYRENNFTKLNE 253
>UBP32_HUMAN (Q8NFA0) Ubiquitin carboxyl-terminal hydrolase 32 (EC 3.1.2.15)| (Ubiquitin thioesterase 32) (Ubiquitin-specific-processing protease 32) (Deubiquitinating enzyme 32) (NY-REN-60 antigen) Length = 1604 Score = 29.6 bits (65), Expect = 6.3 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 3/38 (7%) Frame = +3 Query: 210 KGSKSSVW--WHRXLR*CVVPCSSQRXFVGKS*IR-DW 314 K S W W+R R C + C R F+G + I DW Sbjct: 1162 KDGNSCAWCPWYRFCRGCKIDCGEDRAFIGNAYIAVDW 1199
>STAB1_HUMAN (Q9NY15) Stabilin-1 precursor (FEEL-1 protein) (MS-1 antigen)| Length = 2570 Score = 29.6 bits (65), Expect = 6.3 Identities = 19/69 (27%), Positives = 21/69 (30%) Frame = +3 Query: 357 IHKGLISAKSNQGEGCNRNIR*SQVF*HHTEFLVCTGVQWKTEIC*THCGEIC*FDHGTQ 536 +H L G GC+RN C WK C H G C Sbjct: 1931 VHPSLWGRPQGLGRGCHRN---------------CVTTTWKPSCCPGHYGSEC---QACP 1972 Query: 537 GGGESCCQD 563 GG S C D Sbjct: 1973 GGPSSPCSD 1981
>TRRAP_HUMAN (Q9Y4A5) Transformation/transcription domain-associated protein| (350/400 kDa PCAF-associated factor) (PAF350/400) (STAF40) (Tra1 homolog) Length = 3859 Score = 29.6 bits (65), Expect = 6.3 Identities = 23/78 (29%), Positives = 36/78 (46%) Frame = +1 Query: 316 DVVGAVKKSPMFSQFIKDSSVPKATRVKAVTEIFAEAKFSDITQNFLSVLASNGRLKFVE 495 D +KK F + D + P T++K + E+ ++NF +V +S F+E Sbjct: 13 DQTTLMKKYLQFVAALTDVNTPDETKLKMMQEV---------SENFENVTSSPQYSTFLE 63 Query: 496 RIAERFVDLTMAHRGEVK 549 I RF LT GEV+ Sbjct: 64 HIIPRF--LTFLQDGEVQ 79
>RASA3_MOUSE (Q60790) Ras GTPase-activating protein 3 (GAP1(IP4BP)) (Ins| P4-binding protein) (GapIII) Length = 834 Score = 29.3 bits (64), Expect = 8.2 Identities = 11/24 (45%), Positives = 18/24 (75%) Frame = +1 Query: 409 EIFAEAKFSDITQNFLSVLASNGR 480 E F E K++D +NFL +++S+GR Sbjct: 543 EFFNEQKYADAVKNFLDLISSSGR 566
>RASA3_HUMAN (Q14644) Ras GTPase-activating protein 3 (GAP1(IP4BP)) (Ins| P4-binding protein) Length = 834 Score = 29.3 bits (64), Expect = 8.2 Identities = 11/24 (45%), Positives = 18/24 (75%) Frame = +1 Query: 409 EIFAEAKFSDITQNFLSVLASNGR 480 E F E K++D +NFL +++S+GR Sbjct: 543 EFFNEQKYADAVKNFLDLISSSGR 566 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.131 0.346 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,969,519 Number of Sequences: 219361 Number of extensions: 1051775 Number of successful extensions: 2539 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 2460 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2530 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
