ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart08f12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|D13153.1|WHTCYS1 Triticum aestivum mRNA for O-acetylserine (thiol) lyase Length = 1371 Score = 690 bits (348), Expect = 0.0 Identities = 418/440 (95%), Gaps = 1/440 (0%) Strand = Plus / Plus Query: 31 gcggccgccacttcgtccacctccagctccgggaggaccgcttcgctgccaaatcgctcg 90 ||||||||||||||||||| ||||||||||||||||| | ||| |||| | ||||||||| Sbjct: 1 gcggccgccacttcgtccagctccagctccgggaggatcacttggctgtcgaatcgctcg 60 Query: 91 tcgggcggcgggatgggggaggcttcgacgccggcgatcgccagggatgtcaccgagctg 150 ||| |||||||||||||||||| || | ||||||||||||| |||||||||||||||| Sbjct: 61 tcga-cggcgggatgggggaggcgtcatctccggcgatcgccaaggatgtcaccgagctg 119 Query: 151 atcgggaacacgccgctggtgtacctcaacaaggtgacggacgggtgcgtggggcgcgtc 210 ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 120 atcgggaacacgccgttggtgtacctcaacaaggtgaccgacgggtgcgtggggcgcgtc 179 Query: 211 gccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacagc 270 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 180 gccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattggatacagc 239 Query: 271 atgatcaccgacgcagaggagaaggggttcatcgtcccaggcaagagtgtgctgattgag 330 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 atgatcaccgacgcggaggagaaggggttcatcgtcccaggcaagagtgtgctgattgag 299 Query: 331 ccaaccactggcaacacaggcattgggctggccttcatggctgctgcccagggttacaga 390 ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 300 ccaaccagtggcaacacaggcattgggctggccttcatggctgctgcgaagggttacaga 359 Query: 391 cttgtactcacgatgcccgcctccatgagtatggagaggagaatcatcctgaaggctttt 450 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 360 cttgtactcacaatgcccgcctccatgagtatggagaggagaatcatcttgaaggctttt 419 Query: 451 ggtgctgagctgatcctcac 470 |||||||||||||||||||| Sbjct: 420 ggtgctgagctgatcctcac 439
>gb|BT009041.1| Triticum aestivum clone wdk5c.pk006.c9:fis, full insert mRNA sequence Length = 1355 Score = 668 bits (337), Expect = 0.0 Identities = 413/437 (94%), Gaps = 1/437 (0%) Strand = Plus / Plus Query: 34 gccgccacttcgtccacctccagctccgggaggaccgcttcgctgccaaatcgctcgtcg 93 |||||||||||||||| |||| ||||| | |||| | |||||||| |||||||||||||| Sbjct: 7 gccgccacttcgtccagctccggctccagaaggatcacttcgctgtcaaatcgctcgtcg 66 Query: 94 ggcggcgggatgggggaggcttcgacgccggcgatcgccagggatgtcaccgagctgatc 153 |||||||||||||||||| || | ||||||||||||| ||||||||||||||||||| Sbjct: 67 a-cggcgggatgggggaggcgtcatctccggcgatcgccaaggatgtcaccgagctgatc 125 Query: 154 gggaacacgccgctggtgtacctcaacaaggtgacggacgggtgcgtggggcgcgtcgcc 213 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 126 gggaacacgccgctggtgtacctcaacaaggtgaccgacgggtgcgtggggcgcgtcgcc 185 Query: 214 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacagcatg 273 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 186 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattggatacagcatg 245 Query: 274 atcaccgacgcagaggagaaggggttcatcgtcccaggcaagagtgtgctgattgagcca 333 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 246 atcaccgacgcggaggagaaggggttcatcgtcccaggcaagagtgtcctgattgagcca 305 Query: 334 accactggcaacacaggcattgggctggccttcatggctgctgcccagggttacagactt 393 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 306 accagtggcaacacaggcattgggctggccttcatggctgctgccaagggttacagactt 365 Query: 394 gtactcacgatgcccgcctccatgagtatggagaggagaatcatcctgaaggcttttggt 453 |||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||| Sbjct: 366 gtactcacaatgcccgcatccatgagtatggagaggagaatcatcttgaaggcttttggt 425 Query: 454 gctgagctgatcctcac 470 ||||||||| ||||||| Sbjct: 426 gctgagctggtcctcac 442
>emb|AJ622893.1| Triticum durum partial mRNA for DRP6 protein (drg6 gene) Length = 466 Score = 519 bits (262), Expect = e-144 Identities = 289/298 (96%) Strand = Plus / Minus Query: 173 acctcaacaaggtgacggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatgg 232 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 acctcaacaaggtgaccgacgggtgcgtggggcgcgtcgccgccaagctcgagtccatgg 407 Query: 233 agccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagaggaga 292 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 406 agccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcggaggaga 347 Query: 293 aggggttcatcgtcccaggcaagagtgtgctgattgagccaaccactggcaacacaggca 352 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 346 agaggttcatcgtcccaggcaagagtgtgctgattgagccaaccagtggcaacacaggca 287 Query: 353 ttgggctggccttcatggctgctgcccagggttacagacttgtactcacgatgcccgcct 412 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 286 ttgggctggccttcatggctgctgcgaagggttacagacttgtactcacaatgcccgcct 227 Query: 413 ccatgagtatggagaggagaatcatcctgaaggcttttggtgctgagctgatcctcac 470 ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 226 ccatgagtacggagaggagaatcatcttgaaggcttttggtgctgagctgatcctcac 169
>dbj|AK099598.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045K17, full insert sequence Length = 1281 Score = 420 bits (212), Expect = e-114 Identities = 302/332 (90%) Strand = Plus / Plus Query: 127 atcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctcaacaaggtg 186 ||||||| ||||||||||||| |||| |||||||||||| |||||||||||||| |||| Sbjct: 92 atcgccaaggatgtcaccgagttgattgggaacacgccgttggtgtacctcaaccgggtg 151 Query: 187 acggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatggagccctgctccagc 246 ||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 152 acggatgggtgcgtcgggcgcgtcgcggccaagctcgagtccatggagccatgctccagc 211 Query: 247 gtcaaggacaggattgggtacagcatgatcaccgacgcagaggagaaggggttcatcgtc 306 |||||||| |||||||| ||||| |||||||| || ||||||||||||||| | ||| Sbjct: 212 gtcaaggataggattggatacagtatgatcactgatgcagaggagaaggggctgatcact 271 Query: 307 ccaggcaagagtgtgctgattgagccaaccactggcaacacaggcattgggctggccttc 366 ||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||| Sbjct: 272 ccaggcaagagtgtgctgattgagccaactagtggcaacacaggcattggactggccttc 331 Query: 367 atggctgctgcccagggttacagacttgtactcacgatgcccgcctccatgagtatggag 426 ||||||||||| |||||||||| ||||||||||||||||| ||||||||||| |||||| Sbjct: 332 atggctgctgcaaagggttacaggcttgtactcacgatgccggcctccatgagcatggag 391 Query: 427 aggagaatcatcctgaaggcttttggtgctga 458 ||||||||||| ||||||||||||||||||| Sbjct: 392 aggagaatcatattgaaggcttttggtgctga 423
>dbj|AK061993.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-C03, full insert sequence Length = 1280 Score = 420 bits (212), Expect = e-114 Identities = 302/332 (90%) Strand = Plus / Plus Query: 127 atcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctcaacaaggtg 186 ||||||| ||||||||||||| |||| |||||||||||| |||||||||||||| |||| Sbjct: 91 atcgccaaggatgtcaccgagttgattgggaacacgccgttggtgtacctcaaccgggtg 150 Query: 187 acggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatggagccctgctccagc 246 ||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 151 acggatgggtgcgtcgggcgcgtcgcggccaagctcgagtccatggagccatgctccagc 210 Query: 247 gtcaaggacaggattgggtacagcatgatcaccgacgcagaggagaaggggttcatcgtc 306 |||||||| |||||||| ||||| |||||||| || ||||||||||||||| | ||| Sbjct: 211 gtcaaggataggattggatacagtatgatcactgatgcagaggagaaggggctgatcact 270 Query: 307 ccaggcaagagtgtgctgattgagccaaccactggcaacacaggcattgggctggccttc 366 ||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||| Sbjct: 271 ccaggcaagagtgtgctgattgagccaactagtggcaacacaggcattggactggccttc 330 Query: 367 atggctgctgcccagggttacagacttgtactcacgatgcccgcctccatgagtatggag 426 ||||||||||| |||||||||| ||||||||||||||||| ||||||||||| |||||| Sbjct: 331 atggctgctgcaaagggttacaggcttgtactcacgatgccggcctccatgagcatggag 390 Query: 427 aggagaatcatcctgaaggcttttggtgctga 458 ||||||||||| ||||||||||||||||||| Sbjct: 391 aggagaatcatattgaaggcttttggtgctga 422
>gb|AF073695.1|AF073695 Oryza sativa cysteine synthase (rcs1) mRNA, complete cds Length = 1290 Score = 420 bits (212), Expect = e-114 Identities = 302/332 (90%) Strand = Plus / Plus Query: 127 atcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctcaacaaggtg 186 ||||||| ||||||||||||| |||| |||||||||||| |||||||||||||| |||| Sbjct: 86 atcgccaaggatgtcaccgagttgattgggaacacgccgttggtgtacctcaaccgggtg 145 Query: 187 acggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatggagccctgctccagc 246 ||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 146 acggatgggtgcgtcgggcgcgtcgcggccaagctcgagtccatggagccatgctccagc 205 Query: 247 gtcaaggacaggattgggtacagcatgatcaccgacgcagaggagaaggggttcatcgtc 306 |||||||| |||||||| ||||| |||||||| || ||||||||||||||| | ||| Sbjct: 206 gtcaaggataggattggatacagtatgatcactgatgcagaggagaaggggctgatcact 265 Query: 307 ccaggcaagagtgtgctgattgagccaaccactggcaacacaggcattgggctggccttc 366 ||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||| Sbjct: 266 ccaggcaagagtgtgctgattgagccaactagtggcaacacaggcattggactggccttc 325 Query: 367 atggctgctgcccagggttacagacttgtactcacgatgcccgcctccatgagtatggag 426 ||||||||||| |||||||||| ||||||||||||||||| ||||||||||| |||||| Sbjct: 326 atggctgctgcaaagggttacaggcttgtactcacgatgccggcctccatgagcatggag 385 Query: 427 aggagaatcatcctgaaggcttttggtgctga 458 ||||||||||| ||||||||||||||||||| Sbjct: 386 aggagaatcatattgaaggcttttggtgctga 417
>gb|AY103651.1| Zea mays PCO145346 mRNA sequence Length = 1483 Score = 373 bits (188), Expect = e-100 Identities = 302/340 (88%) Strand = Plus / Plus Query: 119 cgccggcgatcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctca 178 ||||| ||||||||| ||| ||||||||| |||||||||||||||||||||||||||||| Sbjct: 234 cgccgtcgatcgccaaggacgtcaccgagttgatcgggaacacgccgctggtgtacctca 293 Query: 179 acaaggtgacggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatggagccct 238 |||||||||| || |||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 294 acaaggtgaccgatgggtgcgtcggccgcgtcgccgccaagctcgagtccatggagccct 353 Query: 239 gctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagaggagaaggggt 298 |||||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||| Sbjct: 354 gctccagcgtcaaggataggattggctacagcatgatcacggacgcagaggagaaagggc 413 Query: 299 tcatcgtcccaggcaagagtgtgctgattgagccaaccactggcaacacaggcattgggc 358 | || |||||| |||||| |||||||| ||||| | ||||||||||||||||| | Sbjct: 414 tgattactccaggcgtgagtgttctgattgaaccaactagcggcaacacaggcattggac 473 Query: 359 tggccttcatggctgctgcccagggttacagacttgtactcacgatgcccgcctccatga 418 ||||||| |||||||||||| |||| |||| |||| |||||| ||||| |||||||||| Sbjct: 474 tggcctttatggctgctgccaagggctacaaacttacactcacaatgcctgcctccatga 533 Query: 419 gtatggagaggagaatcatcctgaaggcttttggtgctga 458 | ||||||||||| ||||| ||||||||||||||||||| Sbjct: 534 gcatggagaggaggatcatattgaaggcttttggtgctga 573
>gb|BT016496.1| Zea mays clone Contig329 mRNA sequence Length = 1500 Score = 365 bits (184), Expect = 9e-98 Identities = 301/340 (88%) Strand = Plus / Plus Query: 119 cgccggcgatcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctca 178 ||||| ||||||||| ||| ||||||||| |||||||||| ||||||||||||||||||| Sbjct: 231 cgccgtcgatcgccaaggacgtcaccgagttgatcgggaatacgccgctggtgtacctca 290 Query: 179 acaaggtgacggacgggtgcgtggggcgcgtcgccgccaagctcgagtccatggagccct 238 |||||||||| || |||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 291 acaaggtgaccgatgggtgcgtcggccgcgtcgccgccaagctcgagtccatggagccct 350 Query: 239 gctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagaggagaaggggt 298 |||||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||| Sbjct: 351 gctccagcgtcaaggataggattggctacagcatgatcacggacgcagaggagaaagggc 410 Query: 299 tcatcgtcccaggcaagagtgtgctgattgagccaaccactggcaacacaggcattgggc 358 | || |||||| |||||| |||||||| ||||| | ||||||||||||||||| | Sbjct: 411 tgattactccaggcgtgagtgttctgattgaaccaactagcggcaacacaggcattggac 470 Query: 359 tggccttcatggctgctgcccagggttacagacttgtactcacgatgcccgcctccatga 418 ||||||| |||||||||||| |||| |||| |||| |||||| ||||| |||||||||| Sbjct: 471 tggcctttatggctgctgccaagggctacaaacttacactcacaatgcctgcctccatga 530 Query: 419 gtatggagaggagaatcatcctgaaggcttttggtgctga 458 | ||||||||||| ||||| ||||||||||||||||||| Sbjct: 531 gcatggagaggaggatcatattgaaggcttttggtgctga 570
>emb|X85803.1|ZMCSOATL Z.mays mRNA for cysteine synthase Length = 1319 Score = 343 bits (173), Expect = 3e-91 Identities = 301/341 (88%), Gaps = 2/341 (0%) Strand = Plus / Plus Query: 119 cgccggcgatcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctca 178 ||||| ||||||||| ||| ||||||||| |||||||||||||||||||||||||||||| Sbjct: 86 cgccgtcgatcgccaaggacgtcaccgagttgatcgggaacacgccgctggtgtacctca 145 Query: 179 acaaggtgacggacgggtgcgtggggcgc-gtcgccgccaagctcgagtccatggagccc 237 |||||||||| || |||||||| || ||| ||||| |||||||||||||||||||||||| Sbjct: 146 acaaggtgaccgatgggtgcgtcggccgcagtcgc-gccaagctcgagtccatggagccc 204 Query: 238 tgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagaggagaagggg 297 ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||| Sbjct: 205 tgctccagcgtcaaggataggattggctacagcatgatcacggacgcagaggagaaaggg 264 Query: 298 ttcatcgtcccaggcaagagtgtgctgattgagccaaccactggcaacacaggcattggg 357 | || |||||| |||||| |||||||| ||||| | ||||||||||||||||| Sbjct: 265 ctgattactccaggcgtgagtgttctgattgaaccaactagcggcaacacaggcattgga 324 Query: 358 ctggccttcatggctgctgcccagggttacagacttgtactcacgatgcccgcctccatg 417 |||||||| |||||||||||| |||| |||| |||| |||||| ||||| ||||||||| Sbjct: 325 ctggcctttatggctgctgccaagggctacaaacttacactcacaatgcctgcctccatg 384 Query: 418 agtatggagaggagaatcatcctgaaggcttttggtgctga 458 || ||||||||||| ||||| ||||||||||||||||||| Sbjct: 385 agcatggagaggaggatcatattgaaggcttttggtgctga 425
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 208 bits (105), Expect = 1e-50 Identities = 135/145 (93%) Strand = Plus / Minus Query: 314 agagtgtgctgattgagccaaccactggcaacacaggcattgggctggccttcatggctg 373 |||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||| Sbjct: 26734468 agagtgtgctgattgagccaactagtggcaacacaggcattggactggccttcatggctg 26734409 Query: 374 ctgcccagggttacagacttgtactcacgatgcccgcctccatgagtatggagaggagaa 433 |||| |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 26734408 ctgcaaagggttacaggcttgtactcacgatgccggcctccatgagcatggagaggagaa 26734349 Query: 434 tcatcctgaaggcttttggtgctga 458 |||| ||||||||||||||||||| Sbjct: 26734348 tcatattgaaggcttttggtgctga 26734324 Score = 147 bits (74), Expect = 4e-32 Identities = 98/106 (92%) Strand = Plus / Minus Query: 149 tgatcgggaacacgccgctggtgtacctcaacaaggtgacggacgggtgcgtggggcgcg 208 |||| |||||||||||| |||||||||||||| ||||||||| |||||||| ||||||| Sbjct: 26736261 tgattgggaacacgccgttggtgtacctcaaccgggtgacggatgggtgcgtcgggcgcg 26736202 Query: 209 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 254 |||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 26736201 tcgcggccaagctcgagtccatggagccatgctccagcgtcaagga 26736156 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 254 acaggattgggtacagcatgatcaccgacgcagaggagaagggg 297 |||||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 26735956 acaggattggatacagtatgatcactgatgcagaggagaagggg 26735913
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 208 bits (105), Expect = 1e-50 Identities = 135/145 (93%) Strand = Plus / Minus Query: 314 agagtgtgctgattgagccaaccactggcaacacaggcattgggctggccttcatggctg 373 |||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||| Sbjct: 26662638 agagtgtgctgattgagccaactagtggcaacacaggcattggactggccttcatggctg 26662579 Query: 374 ctgcccagggttacagacttgtactcacgatgcccgcctccatgagtatggagaggagaa 433 |||| |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 26662578 ctgcaaagggttacaggcttgtactcacgatgccggcctccatgagcatggagaggagaa 26662519 Query: 434 tcatcctgaaggcttttggtgctga 458 |||| ||||||||||||||||||| Sbjct: 26662518 tcatattgaaggcttttggtgctga 26662494 Score = 147 bits (74), Expect = 4e-32 Identities = 98/106 (92%) Strand = Plus / Minus Query: 149 tgatcgggaacacgccgctggtgtacctcaacaaggtgacggacgggtgcgtggggcgcg 208 |||| |||||||||||| |||||||||||||| ||||||||| |||||||| ||||||| Sbjct: 26664431 tgattgggaacacgccgttggtgtacctcaaccgggtgacggatgggtgcgtcgggcgcg 26664372 Query: 209 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 254 |||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 26664371 tcgcggccaagctcgagtccatggagccatgctccagcgtcaagga 26664326 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 254 acaggattgggtacagcatgatcaccgacgcagaggagaagggg 297 |||||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 26664126 acaggattggatacagtatgatcactgatgcagaggagaagggg 26664083
>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 83015 Score = 208 bits (105), Expect = 1e-50 Identities = 135/145 (93%) Strand = Plus / Plus Query: 314 agagtgtgctgattgagccaaccactggcaacacaggcattgggctggccttcatggctg 373 |||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||| Sbjct: 36656 agagtgtgctgattgagccaactagtggcaacacaggcattggactggccttcatggctg 36715 Query: 374 ctgcccagggttacagacttgtactcacgatgcccgcctccatgagtatggagaggagaa 433 |||| |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 36716 ctgcaaagggttacaggcttgtactcacgatgccggcctccatgagcatggagaggagaa 36775 Query: 434 tcatcctgaaggcttttggtgctga 458 |||| ||||||||||||||||||| Sbjct: 36776 tcatattgaaggcttttggtgctga 36800 Score = 147 bits (74), Expect = 4e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 149 tgatcgggaacacgccgctggtgtacctcaacaaggtgacggacgggtgcgtggggcgcg 208 |||| |||||||||||| |||||||||||||| ||||||||| |||||||| ||||||| Sbjct: 34863 tgattgggaacacgccgttggtgtacctcaaccgggtgacggatgggtgcgtcgggcgcg 34922 Query: 209 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 254 |||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 34923 tcgcggccaagctcgagtccatggagccatgctccagcgtcaagga 34968 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 254 acaggattgggtacagcatgatcaccgacgcagaggagaagggg 297 |||||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 35168 acaggattggatacagtatgatcactgatgcagaggagaagggg 35211
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104849 Score = 208 bits (105), Expect = 1e-50 Identities = 135/145 (93%) Strand = Plus / Plus Query: 314 agagtgtgctgattgagccaaccactggcaacacaggcattgggctggccttcatggctg 373 |||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||| Sbjct: 64510 agagtgtgctgattgagccaactagtggcaacacaggcattggactggccttcatggctg 64569 Query: 374 ctgcccagggttacagacttgtactcacgatgcccgcctccatgagtatggagaggagaa 433 |||| |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 64570 ctgcaaagggttacaggcttgtactcacgatgccggcctccatgagcatggagaggagaa 64629 Query: 434 tcatcctgaaggcttttggtgctga 458 |||| ||||||||||||||||||| Sbjct: 64630 tcatattgaaggcttttggtgctga 64654 Score = 147 bits (74), Expect = 4e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 149 tgatcgggaacacgccgctggtgtacctcaacaaggtgacggacgggtgcgtggggcgcg 208 |||| |||||||||||| |||||||||||||| ||||||||| |||||||| ||||||| Sbjct: 62717 tgattgggaacacgccgttggtgtacctcaaccgggtgacggatgggtgcgtcgggcgcg 62776 Query: 209 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 254 |||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 62777 tcgcggccaagctcgagtccatggagccatgctccagcgtcaagga 62822 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 254 acaggattgggtacagcatgatcaccgacgcagaggagaagggg 297 |||||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 63022 acaggattggatacagtatgatcactgatgcagaggagaagggg 63065
>ref|XM_469737.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1343 Score = 101 bits (51), Expect = 2e-18 Identities = 198/247 (80%) Strand = Plus / Plus Query: 209 tcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtaca 268 |||| |||||||| ||| |||||||||||||||||| |||||||| |||||||| || | Sbjct: 228 tcgctgccaagcttgagatcatggagccctgctccagtgtcaaggataggattggttata 287 Query: 269 gcatgatcaccgacgcagaggagaaggggttcatcgtcccaggcaagagtgtgctgattg 328 ||||||| || || ||||| |||||||| |||| ||||| |||||||| |||||| Sbjct: 288 gcatgattacagatgcagaagagaagggtctcattactccaggaaagagtgttttgattg 347 Query: 329 agccaaccactggcaacacaggcattgggctggccttcatggctgctgcccagggttaca 388 |||| || | ||| || || || ||||| || || ||||||||||||||| ||||||| | Sbjct: 348 agcctactagtggaaatactggtattggccttgctttcatggctgctgccaagggttata 407 Query: 389 gacttgtactcacgatgcccgcctccatgagtatggagaggagaatcatcctgaaggctt 448 || | || || ||||| || |||||||| ||||| ||||| ||||| || ||||| | Sbjct: 408 agctaatcctgacaatgccagcatccatgagcatggaaaggaggatcattcttaaggcct 467 Query: 449 ttggtgc 455 | ||||| Sbjct: 468 tcggtgc 474
>gb|AF073697.1|AF073697 Oryza sativa cysteine synthase (rcs3) mRNA, complete cds Length = 1363 Score = 101 bits (51), Expect = 2e-18 Identities = 198/247 (80%) Strand = Plus / Plus Query: 209 tcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtaca 268 |||| |||||||| ||| |||||||||||||||||| |||||||| |||||||| || | Sbjct: 242 tcgctgccaagcttgagatcatggagccctgctccagtgtcaaggataggattggttata 301 Query: 269 gcatgatcaccgacgcagaggagaaggggttcatcgtcccaggcaagagtgtgctgattg 328 ||||||| || || ||||| |||||||| |||| ||||| |||||||| |||||| Sbjct: 302 gcatgattacagatgcagaagagaagggtctcattactccaggaaagagtgttttgattg 361 Query: 329 agccaaccactggcaacacaggcattgggctggccttcatggctgctgcccagggttaca 388 |||| || | ||| || || || ||||| || || ||||||||||||||| ||||||| | Sbjct: 362 agcctactagtggaaatactggtattggccttgctttcatggctgctgccaagggttata 421 Query: 389 gacttgtactcacgatgcccgcctccatgagtatggagaggagaatcatcctgaaggctt 448 || | || || ||||| || |||||||| ||||| ||||| ||||| || ||||| | Sbjct: 422 agctaatcctgacaatgccagcatccatgagcatggaaaggaggatcattcttaaggcct 481 Query: 449 ttggtgc 455 | ||||| Sbjct: 482 tcggtgc 488
>dbj|AK071279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084C02, full insert sequence Length = 1337 Score = 93.7 bits (47), Expect = 5e-16 Identities = 197/247 (79%) Strand = Plus / Plus Query: 209 tcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtaca 268 |||| |||||||| ||| |||||||||||||||||| |||||||| |||||||| || | Sbjct: 217 tcgctgccaagcttgagatcatggagccctgctccagtgtcaaggataggattggttata 276 Query: 269 gcatgatcaccgacgcagaggagaaggggttcatcgtcccaggcaagagtgtgctgattg 328 ||||||| || || ||||| |||||||| |||| ||||| |||||||| |||| | Sbjct: 277 gcatgattacagatgcagaagagaagggtctcattactccaggaaagagtgttttgatcg 336 Query: 329 agccaaccactggcaacacaggcattgggctggccttcatggctgctgcccagggttaca 388 |||| || | ||| || || || ||||| || || ||||||||||||||| ||||||| | Sbjct: 337 agcctactagtggaaatactggtattggccttgctttcatggctgctgccaagggttata 396 Query: 389 gacttgtactcacgatgcccgcctccatgagtatggagaggagaatcatcctgaaggctt 448 || | || || ||||| || |||||||| ||||| ||||| ||||| || ||||| | Sbjct: 397 agctaatcctgacaatgccagcatccatgagcatggaaaggaggatcattcttaaggcct 456 Query: 449 ttggtgc 455 | ||||| Sbjct: 457 tcggtgc 463
>gb|AY353092.1| Populus x canescens O-acetylserine (thiol)lyase mRNA, partial cds Length = 1192 Score = 79.8 bits (40), Expect = 7e-12 Identities = 118/144 (81%) Strand = Plus / Plus Query: 247 gtcaaggacaggattgggtacagcatgatcaccgacgcagaggagaaggggttcatcgtc 306 ||||| |||||||||||||| || |||||||| || ||||||||||||||| | ||| Sbjct: 43 gtcaaagacaggattgggtatagtatgatcacagatgcagaggagaaggggcttatcaag 102 Query: 307 ccaggcaagagtgtgctgattgagccaaccactggcaacacaggcattgggctggccttc 366 | || ||||||| ||||||||||| || | |||||| || ||||| |||||||| ||| Sbjct: 103 gcgggtgagagtgtcctgattgagcctacgagtggcaatactggcatagggctggcattc 162 Query: 367 atggctgctgcccagggttacaga 390 ||||| ||||| |||| |||||| Sbjct: 163 atggcagctgctaagggctacaga 186
>gb|DQ336288.1| Vitis pseudoreticulata cysteine synthase mRNA, complete cds Length = 756 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 229 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 288 |||||||| ||||| || |||||||||||||| |||||||| |||||||| || ||||| Sbjct: 124 atggagccttgctctagtgtcaaggacaggatcgggtacagtatgatcacagatgcagaa 183 Query: 289 gagaaggg 296 |||||||| Sbjct: 184 gagaaggg 191
>emb|Y10847.1|BJY10847 Brassica juncea mRNA for O-acetylserine(thiol) lyase, clone OAS-TL6 Length = 1238 Score = 65.9 bits (33), Expect = 1e-07 Identities = 165/209 (78%) Strand = Plus / Plus Query: 229 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 288 ||||| ||||||||||||||||| ||||||||||| | ||||||||| | || |||||| Sbjct: 138 atggaaccctgctccagcgtcaaagacaggattggttttagcatgatctctgatgcagag 197 Query: 289 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaaccactggcaacaca 348 | ||||| | || ||||| |||||||| ||||||||||||| | ||| ||||| Sbjct: 198 aaaaagggtctgattaaaccaggagagagtgtgttgattgagccaacgagtggaaacacg 257 Query: 349 ggcattgggctggccttcatggctgctgcccagggttacagacttgtactcacgatgccc 408 || ||||| |||| |||| ||| |||||| |||| |||| ||| | | || ||||| Sbjct: 258 ggagttgggttggcattcacggcggctgccaagggctacaagcttattattaccatgcca 317 Query: 409 gcctccatgagtatggagaggagaatcat 437 || || |||||||| ||||| |||||||| Sbjct: 318 gcttcaatgagtattgagagaagaatcat 346
>gb|AY112530.1| Zea mays CL5251_1 mRNA sequence Length = 1258 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 208 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 267 ||||| || ||||||||| ||||||||||||| ||||||||||||||||| |||||| Sbjct: 88 gtcgctgctaagctcgagattatggagccctgctgtagcgtcaaggacaggatagggtac 147 Query: 268 agcatgatcaccgacgc 284 || ||||| | |||||| Sbjct: 148 agtatgataaacgacgc 164
>gb|AF078693.1|AF078693 Chlamydomonas reinhardtii putative O-acetylserine(thiol)lyase precursor (Crcys-1A) mRNA, nuclear gene encoding organellar protein, complete cds Length = 1492 Score = 63.9 bits (32), Expect = 4e-07 Identities = 128/160 (80%) Strand = Plus / Plus Query: 209 tcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtaca 268 ||||||||||||| ||| |||||||||||||| | ||| ||||||||||| || |||| Sbjct: 251 tcgccgccaagctggagatcatggagccctgctgctccgttaaggacaggatcggctaca 310 Query: 269 gcatgatcaccgacgcagaggagaaggggttcatcgtcccaggcaagagtgtgctgattg 328 |||||||| | ||| ||| || |||| ||||| ||| ||||||| ||| ||| | | Sbjct: 311 gcatgatctcgagcgcggagaaggagggcctcatcaccccgggcaagactgtcctggtgg 370 Query: 329 agccaaccactggcaacacaggcattgggctggccttcat 368 |||| ||| | || ||||| ||||| || ||||||||||| Sbjct: 371 agcccacctcgggtaacaccggcatcggtctggccttcat 410 Score = 40.1 bits (20), Expect = 6.4 Identities = 50/60 (83%) Strand = Plus / Plus Query: 127 atcgccagggatgtcaccgagctgatcgggaacacgccgctggtgtacctcaacaaggtg 186 ||||||| ||||||||||||||||| || || || || |||| ||||| ||||||||| Sbjct: 169 atcgccaccgatgtcaccgagctgattggcaagacccctatggtctacctgaacaaggtg 228
>emb|Y10845.1|BJY10845 Brassica juncea mRNA for O-acetylserine(thiol) lyase, clone OAS-TL4 Length = 1280 Score = 58.0 bits (29), Expect = 3e-05 Identities = 143/181 (79%) Strand = Plus / Plus Query: 208 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 267 ||||| || ||||||||| ||||| || |||||||| ||||| ||||||||||| | Sbjct: 167 gtcgctgctaagctcgagatgatggaaccttgctccagtgtcaaagacaggattggtttt 226 Query: 268 agcatgatcaccgacgcagaggagaaggggttcatcgtcccaggcaagagtgtgctgatt 327 ||||||||| | || |||||| | ||||| | ||| ||||| |||||||||||||| Sbjct: 227 agcatgatctctgatgcagagcaaaagggtctgatcaaaccaggagagagtgtgctgatt 286 Query: 328 gagccaaccactggcaacacaggcattgggctggccttcatggctgctgcccagggttac 387 |||||||| | ||| ||||| || ||||| | || |||| ||| |||||| |||| ||| Sbjct: 287 gagccaacgagtggaaacaccggagttgggttagcgttcacggcggctgccaaggggtac 346 Query: 388 a 388 | Sbjct: 347 a 347
>gb|AF452451.1| Glycine max cysteine synthase mRNA, complete cds Length = 1267 Score = 56.0 bits (28), Expect = 1e-04 Identities = 127/160 (79%) Strand = Plus / Plus Query: 229 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 288 |||||||| ||||| || || ||||||||||||||||| || ||||| | || ||||| Sbjct: 205 atggagccatgctctagtgtgaaggacaggattgggtatagtatgattgctgatgcagaa 264 Query: 289 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaaccactggcaacaca 348 |||||||| | ||| || || |||||||| || ||||||||||| | ||| || || Sbjct: 265 gagaagggacttatcacacctggaaagagtgtcctcattgagccaacaagtggtaatact 324 Query: 349 ggcattgggctggccttcatggctgctgcccagggttaca 388 |||||||| | ||||||||||| || ||| |||||||| Sbjct: 325 ggcattggattagccttcatggcagcagccaggggttaca 364
>gb|AY107771.1| Zea mays PCO121395 mRNA sequence Length = 1573 Score = 56.0 bits (28), Expect = 1e-04 Identities = 91/112 (81%) Strand = Plus / Plus Query: 146 agctgatcgggaacacgccgctggtgtacctcaacaaggtgacggacgggtgcgtggggc 205 |||||||||||| || ||| |||||||||| ||||||||||| || ||||||| | | Sbjct: 374 agctgatcgggaggaccccgatggtgtacctgaacaaggtgaccgaggggtgcggcgccc 433 Query: 206 gcgtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacag 257 | || || ||||||||||||| | || |||| | || ||||||||| ||||| Sbjct: 434 gggtggctgccaagctcgagttcctgcagccgtccttcagcgtcaaagacag 485
>dbj|AB040503.1| Allium tuberosum Bsas1 mRNA for cysteine synthase, complete cds Length = 1671 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 229 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 288 |||||||| || || || || |||||||||||||||||||||||||| || || |||||| Sbjct: 540 atggagccttgttctagtgttaaggacaggattgggtacagcatgattactgaggcagag 599
>emb|BX827385.1|CNS0A2GK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS48ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1229 Score = 54.0 bits (27), Expect = 4e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 229 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 288 ||||| || ||||| |||||||| ||||||||||| | |||||||| | || ||||| Sbjct: 179 atggaaccgtgctctagcgtcaaagacaggattggttttagcatgatttctgatgcagaa 238 Query: 289 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaac 335 |||||||| | ||| ||||| |||||||||||||||||||||| Sbjct: 239 gagaagggtcttatcaaaccaggagagagtgtgctgattgagccaac 285
>ref|XM_416752.1| PREDICTED: Gallus gallus similar to hypothetical protein (LOC418545), mRNA Length = 1751 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 328 gagccaaccactggcaacacaggcattgggctggcctt 365 ||||||||| |||| |||||||| |||||||||||||| Sbjct: 522 gagccaacctctggaaacacaggaattgggctggcctt 559
>gb|BT014392.1| Lycopersicon esculentum clone 133697R, mRNA sequence Length = 1384 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 326 ttgagccaaccactggcaacacaggcattgggctggccttcatggctgct 375 ||||||| || | ||| ||||||||||||||||| |||||||| |||||| Sbjct: 432 ttgagcctacgagtggaaacacaggcattgggcttgccttcattgctgct 481
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 209 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 254 |||| |||||||| ||| |||||||||||||||||| |||||||| Sbjct: 30468420 tcgctgccaagcttgagatcatggagccctgctccagtgtcaagga 30468465 Score = 44.1 bits (22), Expect = 0.41 Identities = 112/142 (78%) Strand = Plus / Plus Query: 314 agagtgtgctgattgagccaaccactggcaacacaggcattgggctggccttcatggctg 373 ||||||| |||||||||| || | ||| || || || ||||| || || |||||||||| Sbjct: 30469031 agagtgttttgattgagcctactagtggaaatactggtattggccttgctttcatggctg 30469090 Query: 374 ctgcccagggttacagacttgtactcacgatgcccgcctccatgagtatggagaggagaa 433 ||||| ||||||| | || | || || ||||| || |||||||| ||||| ||||| | Sbjct: 30469091 ctgccaagggttataagctaatcctgacaatgccagcatccatgagcatggaaaggagga 30469150 Query: 434 tcatcctgaaggcttttggtgc 455 |||| || ||||| || ||||| Sbjct: 30469151 tcattcttaaggccttcggtgc 30469172
>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete sequence Length = 149380 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 209 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 254 |||| |||||||| ||| |||||||||||||||||| |||||||| Sbjct: 8595 tcgctgccaagcttgagatcatggagccctgctccagtgtcaagga 8550 Score = 44.1 bits (22), Expect = 0.41 Identities = 112/142 (78%) Strand = Plus / Minus Query: 314 agagtgtgctgattgagccaaccactggcaacacaggcattgggctggccttcatggctg 373 ||||||| |||||||||| || | ||| || || || ||||| || || |||||||||| Sbjct: 7984 agagtgttttgattgagcctactagtggaaatactggtattggccttgctttcatggctg 7925 Query: 374 ctgcccagggttacagacttgtactcacgatgcccgcctccatgagtatggagaggagaa 433 ||||| ||||||| | || | || || ||||| || |||||||| ||||| ||||| | Sbjct: 7924 ctgccaagggttataagctaatcctgacaatgccagcatccatgagcatggaaaggagga 7865 Query: 434 tcatcctgaaggcttttggtgc 455 |||| || ||||| || ||||| Sbjct: 7864 tcattcttaaggccttcggtgc 7843
>emb|CR353850.1| Gallus gallus finished cDNA, clone ChEST821g21 Length = 780 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 328 gagccaaccactggcaacacaggcattgggctggcctt 365 ||||||||| |||| |||||||| |||||||||||||| Sbjct: 565 gagccaacctctggaaacacaggaattgggctggcctt 602
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 209 tcgccgccaagctcgagtccatggagccctgctccagcgtcaagga 254 |||| |||||||| ||| |||||||||||||||||| |||||||| Sbjct: 30559842 tcgctgccaagcttgagatcatggagccctgctccagtgtcaagga 30559887 Score = 44.1 bits (22), Expect = 0.41 Identities = 112/142 (78%) Strand = Plus / Plus Query: 314 agagtgtgctgattgagccaaccactggcaacacaggcattgggctggccttcatggctg 373 ||||||| |||||||||| || | ||| || || || ||||| || || |||||||||| Sbjct: 30560453 agagtgttttgattgagcctactagtggaaatactggtattggccttgctttcatggctg 30560512 Query: 374 ctgcccagggttacagacttgtactcacgatgcccgcctccatgagtatggagaggagaa 433 ||||| ||||||| | || | || || ||||| || |||||||| ||||| ||||| | Sbjct: 30560513 ctgccaagggttataagctaatcctgacaatgccagcatccatgagcatggaaaggagga 30560572 Query: 434 tcatcctgaaggcttttggtgc 455 |||| || ||||| || ||||| Sbjct: 30560573 tcattcttaaggccttcggtgc 30560594
>dbj|AB029513.2| Solanum tuberosum PCS-2-2 mRNA for plastidic cysteine synthase 2, complete cds Length = 1375 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 326 ttgagccaaccactggcaacacaggcattgggctggccttcatggctgct 375 ||||||| || | ||| ||||||||||||||||| |||||||| |||||| Sbjct: 458 ttgagcctacaagtggaaacacaggcattgggcttgccttcattgctgct 507
>dbj|AB029512.2| Solanum tuberosum PCS-2-1 mRNA for plastidic cysteine synthase 1, complete cds Length = 1378 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 326 ttgagccaaccactggcaacacaggcattgggctggccttcatggctgct 375 ||||||| || | ||| ||||||||||||||||| |||||||| |||||| Sbjct: 458 ttgagcctacaagtggaaacacaggcattgggcttgccttcattgctgct 507
>gb|AF044173.1|AF044173 Solanum tuberosum cysteine synthase mRNA, nuclear gene encoding plastid protein, complete cds Length = 1404 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 326 ttgagccaaccactggcaacacaggcattgggctggccttcatggctgct 375 ||||||| || | ||| ||||||||||||||||| |||||||| |||||| Sbjct: 424 ttgagcctacaagtggaaacacaggcattgggcttgccttcattgctgct 473
>emb|AM087457.1| Nicotiana tabacum partial mRNA for putative chloroplast cysteine synthase 1 precursor (oas1 gene) Length = 1271 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 343 aacacaggcattgggctggccttcatggctgct 375 ||||||||||||||||| |||||||| |||||| Sbjct: 355 aacacaggcattgggcttgccttcattgctgct 387 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 229 atggagccctgctccagcgtcaaggacaggattgggtacagcatgat 275 |||||||| |||| ||| |||||||||||||| |||| ||| ||||| Sbjct: 241 atggagccatgctgcagtgtcaaggacaggatagggttcagtatgat 287
>gb|AY325893.1| Porphyra purpurea cysteine synthase (CS) mRNA, complete cds Length = 1466 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 214 gccaagctcgagtccatggagccctgctc 242 ||||||||||||||||||||||| ||||| Sbjct: 422 gccaagctcgagtccatggagccgtgctc 450
>emb|AJ580401.1|AHA580401 Arabidopsis halleri subsp. halleri partial mRNA for putative o-acetylserine thiol lyase (oasa1 gene) Length = 916 Score = 50.1 bits (25), Expect = 0.007 Identities = 163/209 (77%) Strand = Plus / Plus Query: 229 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 288 ||||| || ||||| ||||| || ||||||||||| | ||||||||| | || ||||| Sbjct: 65 atggaaccatgctctagcgttaaagacaggattggtttcagcatgatttctgatgcagaa 124 Query: 289 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaaccactggcaacaca 348 ||||||| | ||| ||||| |||||||||||||||||||||| | ||| ||||| Sbjct: 125 aagaagggtcttatcaaaccaggagagagtgtgctgattgagccaacaagtggaaacacc 184 Query: 349 ggcattgggctggccttcatggctgctgcccagggttacagacttgtactcacgatgccc 408 || ||||| | || |||| ||| |||||| |||| |||| ||| | | || ||||| Sbjct: 185 ggagttgggttagcattcacggcagctgccaagggctacaagcttattattaccatgcca 244 Query: 409 gcctccatgagtatggagaggagaatcat 437 || || |||||||| ||||| |||||||| Sbjct: 245 gcttcgatgagtattgagagaagaatcat 273
>ref|NM_180692.1| Arabidopsis thaliana OASC; cysteine synthase AT3G59760 (OASC) transcript variant AT3G59760.2 mRNA, complete cds Length = 1553 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 214 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 269 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 495 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 550
>ref|NM_115838.3| Arabidopsis thaliana OASC; cysteine synthase AT3G59760 (OASC) transcript variant AT3G59760.3 mRNA, complete cds Length = 1558 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 214 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 269 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 495 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 550
>ref|NM_180691.1| Arabidopsis thaliana OASC; cysteine synthase AT3G59760 (OASC) transcript variant AT3G59760.1 mRNA, complete cds Length = 1544 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 214 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 269 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 495 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 550
>ref|NM_189518.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1230 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Plus Query: 208 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 267 ||||| || ||||||||| ||||||||||| | ||| |||||||||||||| || ||| Sbjct: 301 gtcgctgctaagctcgagattatggagccctgttgcagtgtcaaggacaggataggatac 360 Query: 268 agcatgat 275 || ||||| Sbjct: 361 agtatgat 368
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 26 cagcagcggccgccacttcgtcca 49 |||||||||||||||||||||||| Sbjct: 1430058 cagcagcggccgccacttcgtcca 1430081
>emb|X81973.1|ATCSMRNA A.thaliana mRNA for cysteine synthase Length = 1564 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 214 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 269 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 454 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 509
>emb|X66860.1|SOCYSK S.oleracea cysk mRNA for O-acetylserine(thiol) lyase Length = 1432 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 228 catggagccctgctccagcgtcaaggacaggattgggtacagcatgat 275 |||||| || |||| ||| ||||||||||||||||| ||||| ||||| Sbjct: 353 catggaaccttgctgcagtgtcaaggacaggattggctacagtatgat 400 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 403 atgcccgcctccatgagtatggagaggagaatcatcctgaaggcttttggtgctgag 459 ||||| || |||||||||||||| |||||| | ||| |||| || ||||| |||||| Sbjct: 528 atgccagcttccatgagtatggaaaggagagttatcttgaaagcatttggagctgag 584
>emb|AJ271727.1|ATH271727 Arabidopsis thaliana partial mRNA for O-acetylserine (thiol) lyase (oasC gene) Length = 1377 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 214 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 269 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 295 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 350
>gb|AY128885.1| Arabidopsis thaliana cysteine synthase (At3g59760) mRNA, complete cds Length = 1460 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 214 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 269 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 424 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 479
>gb|AY099721.1| Arabidopsis thaliana cysteine synthase (At3g59760) mRNA, complete cds Length = 1556 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 214 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 269 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 494 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 549
>emb|BX823399.1|CNS0A6L6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS32ZE09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1500 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 214 gccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtacag 269 ||||| |||||| ||||||||| || | ||| |||||||| |||||||||||||| Sbjct: 462 gccaaactcgagatcatggagccatgttgcagtgtcaaggataggattgggtacag 517
>dbj|AK104704.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-D03, full insert sequence Length = 1555 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Plus Query: 208 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 267 ||||| || ||||||||| ||||||||||| | ||| |||||||||||||| || ||| Sbjct: 353 gtcgctgctaagctcgagattatggagccctgttgcagtgtcaaggacaggataggatac 412 Query: 268 agcatgat 275 || ||||| Sbjct: 413 agtatgat 420
>dbj|AK099217.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013079H24, full insert sequence Length = 1562 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Plus Query: 208 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 267 ||||| || ||||||||| ||||||||||| | ||| |||||||||||||| || ||| Sbjct: 364 gtcgctgctaagctcgagattatggagccctgttgcagtgtcaaggacaggataggatac 423 Query: 268 agcatgat 275 || ||||| Sbjct: 424 agtatgat 431
>dbj|AK065652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035B06, full insert sequence Length = 2104 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Plus Query: 208 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 267 ||||| || ||||||||| ||||||||||| | ||| |||||||||||||| || ||| Sbjct: 895 gtcgctgctaagctcgagattatggagccctgttgcagtgtcaaggacaggataggatac 954 Query: 268 agcatgat 275 || ||||| Sbjct: 955 agtatgat 962
>dbj|AK065007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E19, full insert sequence Length = 1602 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Plus Query: 208 gtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattgggtac 267 ||||| || ||||||||| ||||||||||| | ||| |||||||||||||| || ||| Sbjct: 401 gtcgctgctaagctcgagattatggagccctgttgcagtgtcaaggacaggataggatac 460 Query: 268 agcatgat 275 || ||||| Sbjct: 461 agtatgat 468
>dbj|D14722.1|SPICYSSY Spinacia oleracea mRNA for chloroplast cysteine synthase, complete cds Length = 1484 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 228 catggagccctgctccagcgtcaaggacaggattgggtacagcatgat 275 |||||| || |||| ||| ||||||||||||||||| ||||| ||||| Sbjct: 361 catggaaccttgctgcagtgtcaaggacaggattggctacagtatgat 408 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 403 atgcccgcctccatgagtatggagaggagaatcatcctgaaggcttttggtgctgag 459 ||||| || |||||||||||||| |||||| | ||| |||| || ||||| |||||| Sbjct: 536 atgccagcttccatgagtatggaaaggagagttatcttgaaagcatttggagctgag 592
>gb|L05184.1|SPIOACET Spinacia oleracea chlorplast O-acetylserine-(thiol)-lyase mRNA, complete cds Length = 1446 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 228 catggagccctgctccagcgtcaaggacaggattgggtacagcatgat 275 |||||| || |||| ||| ||||||||||||||||| ||||| ||||| Sbjct: 342 catggaaccttgctgcagtgtcaaggacaggattggctacagtatgat 389
>ref|NM_117574.2| Arabidopsis thaliana OASA1 AT4G14880 (OASA1) transcript variant AT4G14880.1 mRNA, complete cds Length = 1365 Score = 46.1 bits (23), Expect = 0.10 Identities = 86/107 (80%) Strand = Plus / Plus Query: 229 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 288 ||||| || ||||| |||||||| ||||||||||| | |||||||| | || ||||| Sbjct: 266 atggaaccgtgctctagcgtcaaagacaggattggttttagcatgatttctgatgcagaa 325 Query: 289 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaac 335 ||||||| | ||| ||||| |||||||||||||||||||||| Sbjct: 326 aagaagggtcttatcaaaccaggagagagtgtgctgattgagccaac 372
>ref|NM_179055.2| Arabidopsis thaliana OASA1 AT4G14880 (OASA1) transcript variant AT4G14880.2 mRNA, complete cds Length = 1314 Score = 46.1 bits (23), Expect = 0.10 Identities = 86/107 (80%) Strand = Plus / Plus Query: 229 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 288 ||||| || ||||| |||||||| ||||||||||| | |||||||| | || ||||| Sbjct: 211 atggaaccgtgctctagcgtcaaagacaggattggttttagcatgatttctgatgcagaa 270 Query: 289 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaac 335 ||||||| | ||| ||||| |||||||||||||||||||||| Sbjct: 271 aagaagggtcttatcaaaccaggagagagtgtgctgattgagccaac 317
>emb|X84097.1|ATCYS3A A.thaliana mRNA for cysteine synthase Length = 1332 Score = 46.1 bits (23), Expect = 0.10 Identities = 86/107 (80%) Strand = Plus / Plus Query: 229 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 288 ||||| || ||||| |||||||| ||||||||||| | |||||||| | || ||||| Sbjct: 213 atggaaccgtgctctagcgtcaaagacaggattggttttagcatgatttctgatgcagaa 272 Query: 289 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaac 335 ||||||| | ||| ||||| |||||||||||||||||||||| Sbjct: 273 aagaagggtcttatcaaaccaggagagagtgtgctgattgagccaac 319
>emb|X80376.2|ATOACLY Arabidopsis thaliana mRNA for O-acetylserine lyase (At.OAS.5-8) Length = 1253 Score = 46.1 bits (23), Expect = 0.10 Identities = 86/107 (80%) Strand = Plus / Plus Query: 229 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 288 ||||| || ||||| |||||||| ||||||||||| | |||||||| | || ||||| Sbjct: 176 atggaaccgtgctctagcgtcaaagacaggattggttttagcatgatttctgatgcagaa 235 Query: 289 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaac 335 ||||||| | ||| ||||| |||||||||||||||||||||| Sbjct: 236 aagaagggtcttatcaaaccaggagagagtgtgctgattgagccaac 282
>gb|AY045825.1| Arabidopsis thaliana putative cytosolic O-acetylserine(thiol)lyase (At4g14880) mRNA, complete cds Length = 1254 Score = 46.1 bits (23), Expect = 0.10 Identities = 86/107 (80%) Strand = Plus / Plus Query: 229 atggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcagag 288 ||||| || ||||| |||||||| ||||||||||| | |||||||| | || ||||| Sbjct: 189 atggaaccgtgctctagcgtcaaagacaggattggttttagcatgatttctgatgcagaa 248 Query: 289 gagaaggggttcatcgtcccaggcaagagtgtgctgattgagccaac 335 ||||||| | ||| ||||| |||||||||||||||||||||| Sbjct: 249 aagaagggtcttatcaaaccaggagagagtgtgctgattgagccaac 295
>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete sequence Length = 139872 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 228 catggagccctgctccagcgtcaagga 254 |||||||||||||||||| |||||||| Sbjct: 12 catggagccctgctccagtgtcaagga 38 Score = 44.1 bits (22), Expect = 0.41 Identities = 112/142 (78%) Strand = Plus / Plus Query: 314 agagtgtgctgattgagccaaccactggcaacacaggcattgggctggccttcatggctg 373 ||||||| |||||||||| || | ||| || || || ||||| || || |||||||||| Sbjct: 604 agagtgttttgattgagcctactagtggaaatactggtattggccttgctttcatggctg 663 Query: 374 ctgcccagggttacagacttgtactcacgatgcccgcctccatgagtatggagaggagaa 433 ||||| ||||||| | || | || || ||||| || |||||||| ||||| ||||| | Sbjct: 664 ctgccaagggttataagctaatcctgacaatgccagcatccatgagcatggaaaggagga 723 Query: 434 tcatcctgaaggcttttggtgc 455 |||| || ||||| || ||||| Sbjct: 724 tcattcttaaggccttcggtgc 745
>gb|AY766094.1| Allium sativum cysteine synthase GCS3 (gcs3) mRNA, complete cds Length = 1296 Score = 44.1 bits (22), Expect = 0.41 Identities = 55/66 (83%) Strand = Plus / Plus Query: 228 catggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcaga 287 |||||||||||| || || ||||| || ||||||| || |||||||||| || ||||| Sbjct: 241 catggagccctgttctagtgtcaaagataggattgcgttgagcatgatcaatgatgcaga 300 Query: 288 ggagaa 293 |||||| Sbjct: 301 ggagaa 306
>gb|BC026595.1| Mus musculus cystathionine beta-synthase, transcript variant 2, mRNA (cDNA clone MGC:37300 IMAGE:4974777), complete cds Length = 2392 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 attgagccaaccactggcaacacaggcattgggctggc 362 ||||||||||| ||||||||||||| || |||||||| Sbjct: 601 attgagccaacttctggcaacacagggatcgggctggc 638
>gb|BC013480.1| Mus musculus cystathionine beta-synthase, transcript variant 1, mRNA (cDNA clone MGC:18895 IMAGE:4239757), complete cds Length = 2433 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 attgagccaaccactggcaacacaggcattgggctggc 362 ||||||||||| ||||||||||||| || |||||||| Sbjct: 604 attgagccaacttctggcaacacagggatcgggctggc 641
>gb|BC013472.1| Mus musculus cystathionine beta-synthase, transcript variant 2, mRNA (cDNA clone MGC:18856 IMAGE:4221477), complete cds Length = 2380 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 attgagccaaccactggcaacacaggcattgggctggc 362 ||||||||||| ||||||||||||| || |||||||| Sbjct: 594 attgagccaacttctggcaacacagggatcgggctggc 631
>emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 2 Length = 202860 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 agagtgtgctgattgagccaac 335 |||||||||||||||||||||| Sbjct: 84663 agagtgtgctgattgagccaac 84642
>emb|X81697.1|ATCYTACS1 A.thaliana cytACS1 mRNA for cysteine synthase Length = 1278 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 agagtgtgctgattgagccaac 335 |||||||||||||||||||||| Sbjct: 295 agagtgtgctgattgagccaac 316
>emb|X64874.1|CACYSSYNM C.annuum mRNA for cysteine synthase Length = 1313 Score = 44.1 bits (22), Expect = 0.41 Identities = 43/50 (86%) Strand = Plus / Plus Query: 326 ttgagccaaccactggcaacacaggcattgggctggccttcatggctgct 375 ||||||| || | ||| |||||||||||||| || |||||||| |||||| Sbjct: 399 ttgagcctacgagtggaaacacaggcattggtcttgccttcattgctgct 448
>emb|AJ272027.1|ATH272027 Arabidopsis thaliana oasA1 gene for O-acetylserine (thiol) lyase A1, exons 1-11 Length = 5340 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 agagtgtgctgattgagccaac 335 |||||||||||||||||||||| Sbjct: 2603 agagtgtgctgattgagccaac 2624
>ref|NM_144855.1| Mus musculus cystathionine beta-synthase (Cbs), transcript variant 1, mRNA Length = 2433 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 attgagccaaccactggcaacacaggcattgggctggc 362 ||||||||||| ||||||||||||| || |||||||| Sbjct: 604 attgagccaacttctggcaacacagggatcgggctggc 641
>ref|NM_178224.1| Mus musculus cystathionine beta-synthase (Cbs), transcript variant 2, mRNA Length = 2380 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 attgagccaaccactggcaacacaggcattgggctggc 362 ||||||||||| ||||||||||||| || |||||||| Sbjct: 594 attgagccaacttctggcaacacagggatcgggctggc 631
>dbj|AK077669.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730514L10 product:SIMILAR TO CYSTATHIONINE BETA SYNTHASE, full insert sequence Length = 2404 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 attgagccaaccactggcaacacaggcattgggctggc 362 ||||||||||| ||||||||||||| || |||||||| Sbjct: 629 attgagccaacttctggcaacacagggatcgggctggc 666
>dbj|AK085692.1| Mus musculus 10 days lactation, adult female mammary gland cDNA, RIKEN full-length enriched library, clone:D730017E08 product:SIMILAR TO CYSTATHIONINE BETA SYNTHASE, full insert sequence Length = 2448 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 attgagccaaccactggcaacacaggcattgggctggc 362 ||||||||||| ||||||||||||| || |||||||| Sbjct: 630 attgagccaacttctggcaacacagggatcgggctggc 667
>ref|NM_012522.1| Rattus norvegicus cystathionine beta synthase (Cbs), mRNA Length = 2363 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 attgagccaaccactggcaacacaggcattgggctggc 362 ||||||||||| ||||||||||||| || |||||||| Sbjct: 563 attgagccaacttctggcaacacagggatcgggctggc 600
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 334 accactggcaacacaggcattgggctggcc 363 |||| ||||||||| ||||||||||||||| Sbjct: 3689562 accagtggcaacaccggcattgggctggcc 3689591 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 cggcgatcgccagggatgtcaccg 145 ||||||||||||| |||||||||| Sbjct: 2981330 cggcgatcgccagcgatgtcaccg 2981353
>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40 Length = 197405 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 agagtgtgctgattgagccaac 335 |||||||||||||||||||||| Sbjct: 30117 agagtgtgctgattgagccaac 30096
>gb|BC022144.1| Mus musculus cDNA clone IMAGE:5101460, containing frame-shift errors Length = 2458 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 attgagccaaccactggcaacacaggcattgggctggc 362 ||||||||||| ||||||||||||| || |||||||| Sbjct: 629 attgagccaacttctggcaacacagggatcgggctggc 666
>gb|M88344.1|RATRCBSA Rat cystathionine beta-synthase (CBS) mRNA, complete cds (type 1 of four alternatively spliced mRNAs) Length = 2544 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 attgagccaaccactggcaacacaggcattgggctggc 362 ||||||||||| ||||||||||||| || |||||||| Sbjct: 711 attgagccaacttctggcaacacagggatcgggctggc 748
>gb|M88347.1|RATRCBSD Rat pseudo-cystathionine beta-synthase mRNA, complete cds (type 4 of four alternatively spliced mRNAs) Length = 2364 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 attgagccaaccactggcaacacaggcattgggctggc 362 ||||||||||| ||||||||||||| || |||||||| Sbjct: 457 attgagccaacttctggcaacacagggatcgggctggc 494
>gb|M88346.1|RATRCBSC Rat cystathionine beta-synthase mRNA, complete cds (type 3 of four alternatively spliced mRNAs) Length = 2248 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 attgagccaaccactggcaacacaggcattgggctggc 362 ||||||||||| ||||||||||||| || |||||||| Sbjct: 457 attgagccaacttctggcaacacagggatcgggctggc 494
>gb|M88345.1|RATRCBSB Rat pseudo-cystathionine beta-synthase mRNA, complete cds (type 2 of four alternatively spliced mRNAs) Length = 2867 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 attgagccaaccactggcaacacaggcattgggctggc 362 ||||||||||| ||||||||||||| || |||||||| Sbjct: 975 attgagccaacttctggcaacacagggatcgggctggc 1012
>dbj|D01098.1|RATH450 Rattus norvegicus mRNA for hemoprotein H-450, complete cds Length = 2363 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 attgagccaaccactggcaacacaggcattgggctggc 362 ||||||||||| ||||||||||||| || |||||||| Sbjct: 563 attgagccaacttctggcaacacagggatcgggctggc 600
>dbj|AB031003.1| Cyanidioschyzon merolae cmOASTL1 gene for O-acetylserine (thiol) lyase 1, complete cds Length = 1170 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 aagctcgagtccatggagccctgctc 242 ||||| |||||||||||||||||||| Sbjct: 295 aagctggagtccatggagccctgctc 320
>ref|NM_129937.2| Arabidopsis thaliana OASB (CYSTEINE SYNTHASE 1); cysteine synthase AT2G43750 (OASB) mRNA, complete cds Length = 1602 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 gtcaaggacaggattgggtacagcatgat 275 |||||||| |||||||||||||| ||||| Sbjct: 573 gtcaaggataggattgggtacagtatgat 601
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gctgatcgggaacacgccgct 167 ||||||||||||||||||||| Sbjct: 1836671 gctgatcgggaacacgccgct 1836651
>gb|BT014000.1| Lycopersicon esculentum clone 133047R, mRNA sequence Length = 1307 Score = 42.1 bits (21), Expect = 1.6 Identities = 57/69 (82%) Strand = Plus / Plus Query: 228 catggagccctgctccagcgtcaaggacaggattgggtacagcatgatcaccgacgcaga 287 ||||||||| ||||| || || ||||| |||||||| || || ||||| || || || || Sbjct: 181 catggagccatgctctagtgttaaggataggattggttatagtatgattacagatgctga 240 Query: 288 ggagaaggg 296 ||||||||| Sbjct: 241 ggagaaggg 249
>emb|AM087458.1| Nicotiana tabacum mRNA for putative cytosolic cysteine synthase 7 (oas7 gene) Length = 1256 Score = 42.1 bits (21), Expect = 1.6 Identities = 72/89 (80%) Strand = Plus / Plus Query: 205 cgcgtcgccgccaagctcgagtccatggagccctgctccagcgtcaaggacaggattggg 264 ||||| || ||||||||||| ||||||||| ||||| || || ||||| |||||||| Sbjct: 154 cgcgttgctgccaagctcgaaagcatggagccgtgctctagtgttaaggataggattggt 213 Query: 265 tacagcatgatcaccgacgcagaggagaa 293 || || ||||| || || || |||||||| Sbjct: 214 tatagtatgattacggatgctgaggagaa 242
>emb|AL844851.4| Human DNA sequence from clone DAQB-335A13 on chromosome 6 Contains the HCP5P15 pseudogene for HLA complex P5 pseudogene 15, the HLA-F gene for major histocompatibility complex, class I, F, the RPL23AP1 pseudogene for ribosomal protein L23a 1, the DAQB-335A13.8 locus for novel transcripts sharing homology with MICE, the MICE pseudogene for MHC class I polypeptide-related sequence E, the HCG9P5 pseudogene for HLA complex group 9 pseudogene 5, the IFITM4P pseudogene for interferon induced transmembrane protein 4, the HCP5P14 pseudogene for HLA complex P5 pseudogene 14, the HCG4 gene for HLA complex group 4, the HCP5P13 pseudogene for HLA complex P5 pseudogene 13, the DAQB-335A13.14 locus for novel transcripts that share homology with HLA-75, the pseudogene HLA-75, the HLA-90 pseudogene, the RPL7AP7 pseudogene for ribosomal protein L7a pseudogene 7, the MICG pseudogene for MHC class I polypeptide-related sequence G, and 4 CpG islands, complete sequence Length = 119030 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 88 tcgtcgggcggcgggatgggggagg 112 |||||||| |||||||||||||||| Sbjct: 90912 tcgtcgggtggcgggatgggggagg 90936
>emb|AL671561.7| Human DNA sequence from clone XXbac-209H21 on chromosome 6 contains a HLA (MHC) class 1 pseudogene, a putative novel MHC class 1 (HLA) protein (fragment), a 60S ribosomal protein L7A (RPL7A) pseudogene, a P5-1 pseudogene, the HLA-G gene for histompatibility antigen, class I, G, a major histocompatibility complex, class I, H pseudogene (HLA-H, HLAHP) and five CpG islands, complete sequence Length = 105633 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 88 tcgtcgggcggcgggatgggggagg 112 |||||||| |||||||||||||||| Sbjct: 526 tcgtcgggtggcgggatgggggagg 550
>emb|AL669813.6| Human DNA sequence from clone XXbac-231I11 on chromosome 6 contains the 3' end of the gene for myelin oligodendrocyte glycoprotein (MOG), a novel KRAB box-containing C2H2 type zinc finger protein (fragment), a P5-1 pseudogene, the HLA-F gene for major histocompatibility complex, class I, F (HLAF, HLA-5.4, HLA-CDA12), a 60S ribosomal protein L23A (RPL23A) pseudogene, a MHC class 1 polypeptide-related sequence B (MICB) pseudogene, a HCGIX pseudogene, a interferon-induced transmembrane protein 3 (IFITM3, 1-8U) pseudogene and four CpG islands, complete sequence Length = 115133 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 88 tcgtcgggcggcgggatgggggagg 112 |||||||| |||||||||||||||| Sbjct: 113659 tcgtcgggtggcgggatgggggagg 113683
>gb|AY096681.1| Arabidopsis thaliana putative cysteine synthase cpACS1 (At2g43750) mRNA, complete cds Length = 1210 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 gtcaaggacaggattgggtacagcatgat 275 |||||||| |||||||||||||| ||||| Sbjct: 343 gtcaaggataggattgggtacagtatgat 371
>emb|X81698.1|ATCPACS1 A.thaliana cpACS1 mRNA for cysteine synthase Length = 1420 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 gtcaaggacaggattgggtacagcatgat 275 |||||||| |||||||||||||| ||||| Sbjct: 398 gtcaaggataggattgggtacagtatgat 426
>emb|X80377.2|ATOACLY2 Arabidopsis thaliana mRNA for O-acetylserine lyase (At.OAS.7-4) Length = 1378 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 gtcaaggacaggattgggtacagcatgat 275 |||||||| |||||||||||||| ||||| Sbjct: 355 gtcaaggataggattgggtacagtatgat 383
>gb|AY065375.1| Arabidopsis thaliana cysteine synthase cpACS1 (At2g43750) mRNA, complete cds Length = 1489 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 gtcaaggacaggattgggtacagcatgat 275 |||||||| |||||||||||||| ||||| Sbjct: 467 gtcaaggataggattgggtacagtatgat 495
>emb|CR925767.6| Human DNA sequence from clone DAAP-84C21 on chromosome 6, complete sequence Length = 112545 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 88 tcgtcgggcggcgggatgggggagg 112 |||||||| |||||||||||||||| Sbjct: 27683 tcgtcgggtggcgggatgggggagg 27707
>gb|AF324490.1|AF324490 Anas platyrhynchos membrane-bound immunoglobulin alpha heavy chain mRNA, partial cds, alternatively spliced Length = 440 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 cttcgtccacctccagctccg 61 ||||||||||||||||||||| Sbjct: 268 cttcgtccacctccagctccg 248
>emb|BX819476.1|CNS0A9QD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB80ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1346 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 gtcaaggacaggattgggtacagcatgat 275 |||||||| |||||||||||||| ||||| Sbjct: 383 gtcaaggataggattgggtacagtatgat 411
>gb|AY086156.1| Arabidopsis thaliana clone 21866 mRNA, complete sequence Length = 1503 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 gtcaaggacaggattgggtacagcatgat 275 |||||||| |||||||||||||| ||||| Sbjct: 498 gtcaaggataggattgggtacagtatgat 526
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 88 tcgtcgggcggcgggatgggggagg 112 |||||||| |||||||||||||||| Sbjct: 2154521 tcgtcgggtggcgggatgggggagg 2154497
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 cgctcgtcgggcggcgggatg 105 ||||||||||||||||||||| Sbjct: 2834767 cgctcgtcgggcggcgggatg 2834787
>emb|AJ314756.1|APL314756 Anas platyrhynchos partial mRNA for immunoglobulin alpha heavy chain (mIgA gene) Length = 440 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 cttcgtccacctccagctccg 61 ||||||||||||||||||||| Sbjct: 268 cttcgtccacctccagctccg 248
>dbj|AB023058.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region, clone:950A3, complete sequence Length = 114450 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 88 tcgtcgggcggcgggatgggggagg 112 |||||||| |||||||||||||||| Sbjct: 39154 tcgtcgggtggcgggatgggggagg 39130
>ref|NM_184430.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3038 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 cggccgccacttcgtccacctcca 55 ||||||||||||||||| |||||| Sbjct: 518 cggccgccacttcgtccgcctcca 541
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ggcaagagtgtgctgattga 329 |||||||||||||||||||| Sbjct: 4261410 ggcaagagtgtgctgattga 4261391
>ref|XM_322803.1| Neurospora crassa OR74A hypothetical protein (NCU03546.1) partial mRNA Length = 4401 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 tgggggaggcttcgacgccg 123 |||||||||||||||||||| Sbjct: 3601 tgggggaggcttcgacgccg 3582
>ref|XM_951732.1| Neurospora crassa OR74A hypothetical protein (NCU03546.1) partial mRNA Length = 4401 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 tgggggaggcttcgacgccg 123 |||||||||||||||||||| Sbjct: 3601 tgggggaggcttcgacgccg 3582
>ref|XR_003996.1| PREDICTED: Mus musculus similar to ring finger and KH domain containing 2 (LOC672777), mRNA Length = 903 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cttcgtccacctccagctcc 60 |||||||||||||||||||| Sbjct: 208 cttcgtccacctccagctcc 189
>gb|AC134447.2| Mus musculus BAC clone RP24-186D1 from chromosome 18, complete sequence Length = 179514 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cttcgtccacctccagctcc 60 |||||||||||||||||||| Sbjct: 99651 cttcgtccacctccagctcc 99632
>ref|XM_502161.1| Yarrowia lipolytica CLIB122, YALI0C22990g predicted mRNA Length = 2532 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 agtccatggagccctgctcc 243 |||||||||||||||||||| Sbjct: 2407 agtccatggagccctgctcc 2388
>gb|AC107980.8| Homo sapiens chromosome 15, clone CTD-3118D7, complete sequence Length = 141868 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gcagaggagaaggggttcat 302 |||||||||||||||||||| Sbjct: 41557 gcagaggagaaggggttcat 41576
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 cagcgtcaaggacaggattg 262 |||||||||||||||||||| Sbjct: 4427403 cagcgtcaaggacaggattg 4427422
>emb|AL669986.1|NCB7N14 Neurospora crassa DNA linkage group II BAC clone B7N14 Length = 107947 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 tgggggaggcttcgacgccg 123 |||||||||||||||||||| Sbjct: 84472 tgggggaggcttcgacgccg 84453
>emb|AJ299249.1|NTA299249 Nicotiana tabacum mRNA for cysteine synthase (cs1 gene), clone 4T7 Length = 1493 Score = 40.1 bits (20), Expect = 6.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 135 ggatgtcaccgagctgatcgggaacacgccgctggtgtacctcaacaa 182 ||||||||| ||||| ||||||||||| || |||| || |||||||| Sbjct: 114 ggatgtcacagagcttatcgggaacacccctatggtatatctcaacaa 161
>emb|AL732464.19| Mouse DNA sequence from clone RP23-453F10 on chromosome 4, complete sequence Length = 192919 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 447 ttttggtgctgagctgatcctcac 470 |||||||||||||||||| ||||| Sbjct: 97648 ttttggtgctgagctgatgctcac 97625
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 292 aaggggttcatcgtcccaggcaagagtg 319 |||||||||||| ||||||| ||||||| Sbjct: 2005567 aaggggttcatcatcccaggtaagagtg 2005594
>ref|NM_001039214.1| Mus musculus ring finger and KH domain containing 2 (Rkhd2), mRNA Length = 2052 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cttcgtccacctccagctcc 60 |||||||||||||||||||| Sbjct: 584 cttcgtccacctccagctcc 565
>dbj|AK133686.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330437G16 product:hypothetical Proline-rich region profile/Alanine-rich region profile/Glutamic acid-rich region profile containing protein, full insert sequence Length = 2052 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cttcgtccacctccagctcc 60 |||||||||||||||||||| Sbjct: 584 cttcgtccacctccagctcc 565
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 cggccgccacttcgtccacctcca 55 ||||||||||||||||| |||||| Sbjct: 2982574 cggccgccacttcgtccgcctcca 2982597
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 tccacctccagctccgggag 65 |||||||||||||||||||| Sbjct: 4971598 tccacctccagctccgggag 4971617
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 cgacgccggcgatcgccagg 135 |||||||||||||||||||| Sbjct: 1596207 cgacgccggcgatcgccagg 1596226
>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0011G08 Length = 139490 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 cggccgccacttcgtccacctcca 55 ||||||||||||||||| |||||| Sbjct: 64091 cggccgccacttcgtccgcctcca 64114
>dbj|AK099840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108C16, full insert sequence Length = 3038 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 cggccgccacttcgtccacctcca 55 ||||||||||||||||| |||||| Sbjct: 518 cggccgccacttcgtccgcctcca 541
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 agtccatggagccctgctcc 243 |||||||||||||||||||| Sbjct: 3085728 agtccatggagccctgctcc 3085747 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,431,546 Number of Sequences: 3902068 Number of extensions: 3431546 Number of successful extensions: 74611 Number of sequences better than 10.0: 123 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 73653 Number of HSP's gapped (non-prelim): 944 length of query: 472 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 450 effective length of database: 17,147,199,772 effective search space: 7716239897400 effective search space used: 7716239897400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
