Clone Name | bart08f08 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | DCK1_FOWPV (P21974) Probable deoxycytidine kinase FPV059 (EC 2.7... | 31 | 1.3 | 2 | IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2 | 29 | 5.0 |
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>DCK1_FOWPV (P21974) Probable deoxycytidine kinase FPV059 (EC 2.7.1.74) (dCK)| Length = 219 Score = 31.2 bits (69), Expect = 1.3 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = +1 Query: 340 FLFVADVAELARMADPRYAVLCVHHD-YTPKEATQMDGAV 456 ++F L M DP +A+ C HD YT K Q DG + Sbjct: 100 YVFAEAATALGYMDDPEWALYCKQHDWYTDKLEIQFDGII 139
>IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2| Length = 954 Score = 29.3 bits (64), Expect = 5.0 Identities = 24/77 (31%), Positives = 29/77 (37%), Gaps = 3/77 (3%) Frame = +3 Query: 45 GTMPAPR-R*ERPRDGR-AIPRVRGLRLPRGHRIPRVPXXXXXXXXXXXGGHPDRPA-GA 215 G APR + PR G R +G+ P IPR GG P RP G Sbjct: 175 GNASAPRPHAQGPRPGNNPFSRKQGMHTPTPGDIPRPHPMARPTADNGRGGRPGRPGQGQ 234 Query: 216 PRGRAVLAGARADGERG 266 +GR G G +G Sbjct: 235 GQGRGFRGGRPGQGGQG 251 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,070,827 Number of Sequences: 219361 Number of extensions: 706523 Number of successful extensions: 2716 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2617 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2708 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)