>KPTA_DEIRA (Q9RRR1) Probable RNA 2'-phosphotransferase (EC 2.7.-.-)|
          Length = 283

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 33/118 (27%), Positives = 42/118 (35%), Gaps = 2/118 (1%)
 Frame = -3

Query: 467 RQHTSLELPRNNAFGREAVHEDDRRPRGLSFGVAMLLGVGGWRLIGLRRRFGRDLTHGGL 288
           R H S  LP+N         E       L  G    L V  WRL     R G    H   
Sbjct: 93  RGHCSFSLPQNRRRRLGLPAEGVPLDPALKNGACASLSVRRWRLFSAAPRAGEGWRHA-- 150

Query: 287 VPGELVLGHPEGEHRAGAIHVHSVLP--KPGPLDQEVQQRLLRLHQVHHPNLCSFTTA 120
                      G  R GA    + LP  +PG  D   ++ L  +H+ HH +L + T A
Sbjct: 151 -----------GTRRVGAAGAAARLPAGQPGAPDAIRREGLRPVHR-HHVSLSADTGA 196

>NFRKB_HUMAN (Q6P4R8) Nuclear factor related to kappa-B-binding protein|
           (DNA-binding protein R kappa-B)
          Length = 1299

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 17/31 (54%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +1

Query: 202 PGFGST-LWTWMAPARCSPSGCPRTSSPGTS 291
           PG G T L     PA  SP   P TSSPGTS
Sbjct: 870 PGPGQTGLTVTSLPATASPVSKPATSSPGTS 900

>RR14_ASTLO (P24354) Plastid 30S ribosomal protein S14|
          Length = 100

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3

Query: 350 GGWRLIGLRRRFGRDLTHGGLVPG 279
           G +R  GL R   RD+ H GL+PG
Sbjct: 71  GYYRFFGLSRHIFRDMAHYGLLPG 94

>CBPE_BOVIN (P04836) Carboxypeptidase E (EC 3.4.17.10) (CPE) (Carboxypeptidase|
           H) (CPH) (Enkephalin convertase) (Prohormone-processing
           carboxypeptidase)
          Length = 434

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -3

Query: 281 GELVLGHPEGEHRAGAIHVHSVLPKPGPLDQEVQQRLLRLHQVHHP 144
           G+LV  +P  E R+G+ H +S  P     D ++ Q L R +   +P
Sbjct: 208 GDLVANYPYDETRSGSAHEYSSCP-----DDDIFQSLARAYSSFNP 248


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,289,516
Number of Sequences: 219361
Number of extensions: 1290936
Number of successful extensions: 3799
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3798
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)