Clone Name | bart08e02 |
---|---|
Clone Library Name | barley_pub |
>DBAT_TAXCU (Q9M6E2) 10-deacetylbaccatin III 10-O-acetyltransferase (EC| 2.3.1.167) (DBAT) Length = 440 Score = 52.0 bits (123), Expect = 8e-07 Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 5/114 (4%) Frame = +1 Query: 154 FDTYISVIYAFHAPAPPNAVLEAGLGRALVDYREWAGRLGVDASGGRAILLNDAGARFVE 333 F+T + + P V+ L + LV Y +AGRL +G + GA FVE Sbjct: 44 FNTLLVYNASDRVSVDPAKVIRQALSKVLVYYSPFAGRLRKKENGDLEVECTGEGALFVE 103 Query: 334 ATADVALDSVMPL---KPTSEVL--SLHPSGDDGPEELMLIQVTRFACGSLVVG 480 A AD L + L P+ E L L P D +++QVTRF CG VVG Sbjct: 104 AMADTDLSVLGDLDDYSPSLEQLLFCLPPDTDIEDIHPLVVQVTRFTCGGFVVG 157
>DBBT_TAXCU (Q9FPW3) 2-alpha-hydroxytaxane 2-O-benzoyltransferase (EC| 2.3.1.166) (TBT) (2-debenzoyl-7,13-diacetylbaccatin III-2-O-benzoyl transferase) (DBBT) Length = 440 Score = 48.5 bits (114), Expect = 9e-06 Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 5/100 (5%) Frame = +1 Query: 196 APPNAVLEAGLGRALVDYREWAGRLGVDASGGRAILLNDAGARFVEATADVALDSVMPLK 375 A P + L + LV Y +AGRL +G + GA FVEA AD L + Sbjct: 54 ADPAKTIREALSKVLVYYPPFAGRLRNTENGDLEVECTGEGAVFVEAMADNDLSVLQDFN 113 Query: 376 ---PTSEVLSLHPSGDDGPEELML--IQVTRFACGSLVVG 480 P+ + L + D E+L L +QVTRF CG VVG Sbjct: 114 EYDPSFQQLVFNLREDVNIEDLHLLTVQVTRFTCGGFVVG 153
>T5AT_TAXCH (Q8S9G6) Taxadien-5-alpha-ol O-acetyltransferase (EC 2.3.1.162)| (Taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase) (Taxadienol acetyltransferase) Length = 439 Score = 47.4 bits (111), Expect = 2e-05 Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 7/102 (6%) Frame = +1 Query: 196 APPNAVLEAGLGRALVDYREWAGRLGVDASGGRAILLNDAGARFVEATADVAL------- 354 A P ++ L + LV Y +AGRL +G + GA F+EA AD L Sbjct: 60 ADPAKLIREALAKILVYYPPFAGRLRETENGDLEVECTGEGAMFLEAMADNELSVLGDFD 119 Query: 355 DSVMPLKPTSEVLSLHPSGDDGPEELMLIQVTRFACGSLVVG 480 DS + L L + D P L+++QVTRF CG VVG Sbjct: 120 DSNPSFQQLLFSLPLDTNFKDLP--LLVVQVTRFTCGGFVVG 159
>DBNBT_TAXCA (Q8LL69) 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase (EC| 2.3.1.-) (DBTNBT) Length = 441 Score = 47.0 bits (110), Expect = 3e-05 Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 10/129 (7%) Frame = +1 Query: 124 VPLTVLDKANFDTYI-SVIYAFHAP----APPNAVLEAGLGRALVDYREWAGRLGVDASG 288 V L+V+D I + + F+AP A P ++ L + LV Y AGRL G Sbjct: 30 VQLSVVDSLTICRGIFNTLLVFNAPDNISADPVKIIREALSKVLVYYFPLAGRLRSKEIG 89 Query: 289 GRAILLNDAGARFVEATAD---VALDSVMPLKPTSEVLSLHPSGDDGPEEL--MLIQVTR 453 + GA FVEA + L + L P+ + L D E+L +++QVTR Sbjct: 90 ELEVECTGDGALFVEAMVEDTISVLRDLDDLNPSFQQLVFWHPLDTAIEDLHLVIVQVTR 149 Query: 454 FACGSLVVG 480 F CG + VG Sbjct: 150 FTCGGIAVG 158
>T5AT_TAXCU (Q9M6F0) Taxadien-5-alpha-ol O-acetyltransferase (EC 2.3.1.162)| (Taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase) (Taxadienol acetyltransferase) Length = 439 Score = 44.7 bits (104), Expect = 1e-04 Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 5/100 (5%) Frame = +1 Query: 196 APPNAVLEAGLGRALVDYREWAGRLGVDASGGRAILLNDAGARFVEATADVALDSVMPLK 375 A P + L + LV Y +AGRL +G + GA F+EA AD L + Sbjct: 60 ADPAKPIREALAKILVYYPPFAGRLRETENGDLEVECTGEGAMFLEAMADNELSVLGDFD 119 Query: 376 PTSE-----VLSLHPSGDDGPEELMLIQVTRFACGSLVVG 480 ++ + SL + L+++QVTRF CG VVG Sbjct: 120 DSNPSFQQLLFSLPLDTNFKDLSLLVVQVTRFTCGGFVVG 159
>HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) Length = 445 Score = 43.5 bits (101), Expect = 3e-04 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 6/98 (6%) Frame = +1 Query: 205 NAVLEAGLGRALVDYREWAGRLGVDASGGR-AILLNDAGARFVEATADVALDSVMPLKPT 381 N ++EA L +ALV Y AGRL ++ G R I N GA FVEA + L+ +P Sbjct: 65 NILIEA-LSKALVPYYPMAGRLKIN--GDRYEIDCNGEGALFVEAESSHVLEDFGDFRPN 121 Query: 382 SEVLSLHPSGDDGPE-----ELMLIQVTRFACGSLVVG 480 E+ + D + L+++Q+TRF CG + +G Sbjct: 122 DELHRVMVPTCDYSKGISSFPLLMVQLTRFRCGGVSIG 159
>HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) Length = 446 Score = 43.1 bits (100), Expect = 4e-04 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 6/98 (6%) Frame = +1 Query: 205 NAVLEAGLGRALVDYREWAGRLGVDASGGR-AILLNDAGARFVEATADVALDSVMPLKPT 381 N ++EA L +ALV Y AGRL ++ G R I N GA FVEA + L+ +P Sbjct: 65 NILIEA-LSKALVPYYPMAGRLKIN--GDRYEIDCNAEGALFVEAESSHVLEDFGDFRPN 121 Query: 382 SEVLSLHPSGDDGPE-----ELMLIQVTRFACGSLVVG 480 E+ + D + L+++Q+TRF CG + +G Sbjct: 122 DELHRVMVPTCDYSKGISSFPLLMVQLTRFRCGGVSIG 159
>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) Length = 445 Score = 41.6 bits (96), Expect = 0.001 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 6/98 (6%) Frame = +1 Query: 205 NAVLEAGLGRALVDYREWAGRLGVDASGGR-AILLNDAGARFVEATADVALDSVMPLKPT 381 N ++EA L +ALV + AGRL ++ G R I N GA FVEA + L+ +P Sbjct: 65 NILIEA-LSKALVPFYPMAGRLKIN--GDRYEIDCNAEGALFVEAESSHVLEDFGDFRPN 121 Query: 382 SEVLSLHPSGDDGPE-----ELMLIQVTRFACGSLVVG 480 E+ + D + L+++Q+TRF CG + +G Sbjct: 122 DELHRVMVPTCDYSKGISSFPLLMVQLTRFRCGGVSIG 159
>CD52_RAT (Q63064) CAMPATH-1 antigen precursor (Lymphocyte differentiation| antigen B7) (CD52 antigen) (CDw52) Length = 96 Score = 32.3 bits (72), Expect = 0.66 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%) Frame = -2 Query: 245 STSALPSPASRTALGGAGAWKA*ITEMYVSKLALSSTVSGTTSAVH--PGATPQAPYSGL 72 +++A+ +PA++ A A KA ++T + TT+AV PG P+A S + Sbjct: 26 NSTAVTTPANKAATTAAATTKA-----------AATTATKTTTAVRKTPGKPPKAGASSI 74 Query: 71 TALDECTVIFMS 36 T + CT +F + Sbjct: 75 TDVGACTFLFFA 86
>TID_DROME (Q27237) Protein tumorous imaginal discs, mitochondrial precursor| (Protein lethal(2)tumorous imaginal discs) (TID56) (TID50) Length = 520 Score = 31.6 bits (70), Expect = 1.1 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -1 Query: 369 RHDAVERHVGRRLHEPGAGVVEQDRAAAAGVDAEPPGP 256 R D ++ EPGAG + AAAAG A PGP Sbjct: 437 RKDGSKQATAGASEEPGAGAAAKASAAAAGSGASKPGP 474
>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4| (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130) Length = 1085 Score = 31.2 bits (69), Expect = 1.5 Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 8/93 (8%) Frame = -2 Query: 320 APASLSRIARPP--------LASTPSRPAHSR*STSALPSPASRTALGGAGAWKA*ITEM 165 APA + A PP LA P PA + A+P PA+ G AGA A Sbjct: 260 APAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPA----- 314 Query: 164 YVSKLALSSTVSGTTSAVHPGATPQAPYSGLTA 66 + +G + PGA AP G+ A Sbjct: 315 ---PAPAAGGPAGVSGQPGPGAAAAAPAPGVKA 344
>KR2_EHV1V (P84391) Probable serine/threonine-protein kinase (EC 2.7.11.1)| Length = 594 Score = 30.0 bits (66), Expect = 3.3 Identities = 25/79 (31%), Positives = 36/79 (45%) Frame = +1 Query: 223 GLGRALVDYREWAGRLGVDASGGRAILLNDAGARFVEATADVALDSVMPLKPTSEVLSLH 402 GLGRALV G +D GG I +N + FV + + S+M L S + Sbjct: 331 GLGRALVYLNTSCGLTHLDVKGGN-IFVNH--SHFVISDCVIGDLSLMTLNTNSMAMRAE 387 Query: 403 PSGDDGPEELMLIQVTRFA 459 D G EE+ +++ R A Sbjct: 388 FEIDTGEEEIKTLRLPRSA 406
>KR2_EHV1B (P28966) Probable serine/threonine-protein kinase (EC 2.7.11.1)| Length = 594 Score = 30.0 bits (66), Expect = 3.3 Identities = 25/79 (31%), Positives = 36/79 (45%) Frame = +1 Query: 223 GLGRALVDYREWAGRLGVDASGGRAILLNDAGARFVEATADVALDSVMPLKPTSEVLSLH 402 GLGRALV G +D GG I +N + FV + + S+M L S + Sbjct: 331 GLGRALVYLNTSCGLTHLDVKGGN-IFVNH--SHFVISDCVIGDLSLMTLNTNSMAMRAE 387 Query: 403 PSGDDGPEELMLIQVTRFA 459 D G EE+ +++ R A Sbjct: 388 FEIDTGEEEIKTLRLPRSA 406
>ALGP_PSEAE (P15276) Transcriptional regulatory protein algP (Alginate| regulatory protein algR3) Length = 352 Score = 30.0 bits (66), Expect = 3.3 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 3/87 (3%) Frame = -2 Query: 317 PASLSRIARP---PLASTPSRPAHSR*STSALPSPASRTALGGAGAWKA*ITEMYVSKLA 147 PA+ + A+P P A ++PA + SA PA++ A A A V+ Sbjct: 249 PAAKTAAAKPAAKPAAKPAAKPAAKPVAKSAAAKPAAKPAAKPAAKPAAKPAAKPVAAKP 308 Query: 146 LSSTVSGTTSAVHPGATPQAPYSGLTA 66 ++T T A P ATP AP + +A Sbjct: 309 -AATKPATAPAAKPAATPSAPAAASSA 334
>DED1_CRYNE (Q5KN36) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 637 Score = 29.6 bits (65), Expect = 4.3 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = -2 Query: 317 PASLSRIARPPLASTPSRPAHSR*STSALPSPAS 216 P L A PP A P+ PA R S + LP+PA+ Sbjct: 32 PPHLRNRAAPPAAVPPAAPAAYRPSPTGLPTPAT 65
>ANK1_HUMAN (P16157) Ankyrin-1 (Erythrocyte ankyrin) (Ankyrin-R)| Length = 1880 Score = 29.3 bits (64), Expect = 5.6 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = -1 Query: 363 DAVERHVGRRLHEPGAGVVEQDRAAAAGVDAEPPGPLAVVHQR 235 D +E+ G+R E G QD A AG D+E L HQR Sbjct: 1635 DLLEQEEGQRSEEKLPGSKRQDDATGAGQDSENEVSLVSGHQR 1677
>CPO_DROME (Q01617) Protein couch potato| Length = 738 Score = 29.3 bits (64), Expect = 5.6 Identities = 22/70 (31%), Positives = 33/70 (47%) Frame = -2 Query: 245 STSALPSPASRTALGGAGAWKA*ITEMYVSKLALSSTVSGTTSAVHPGATPQAPYSGLTA 66 + +A P A+ TA A A Y+S AL+S T +A HPG PQ + A Sbjct: 650 TAAAAPQSAAATAAAAAAASH----HHYLSSPALASPAGSTNNASHPG-NPQ-----IAA 699 Query: 65 LDECTVIFMS 36 C+ +F++ Sbjct: 700 NAPCSTLFVA 709
>COAT_CNV (P15183) Coat protein| Length = 380 Score = 29.3 bits (64), Expect = 5.6 Identities = 22/75 (29%), Positives = 32/75 (42%) Frame = -2 Query: 290 PPLASTPSRPAHSR*STSALPSPASRTALGGAGAWKA*ITEMYVSKLALSSTVSGTTSAV 111 P L S A S + LP + A W+A + YV + +STV G T ++ Sbjct: 262 PLLESLFRESASSVQTRMGLPYFSLEVASATDLVWQARVPGTYVVTIIFNSTVGGLTPSI 321 Query: 110 HPGATPQAPYSGLTA 66 G T + +S TA Sbjct: 322 SGGGTINSSFSVSTA 336
>ATG4_MAGGR (Q523C3) Cysteine protease ATG4 (EC 3.4.22.-) (Autophagy-related| protein 4) Length = 572 Score = 28.9 bits (63), Expect = 7.3 Identities = 22/90 (24%), Positives = 33/90 (36%) Frame = -2 Query: 473 TSDPHANRVTWIXXXXXXXXXPLGCRLRTSDVGLSGMXXXXXXXXXXXTNRAPASLSRIA 294 T+DP ANR W + + + D LS R PA +++ Sbjct: 109 TNDPIANRPAWCLGYEYTLETNITSKTKGEDSKLS-------TATSSDQQRPPAQANKVP 161 Query: 293 RPPLASTPSRPAHSR*STSALPSPASRTAL 204 + P A P+ A + S + P P AL Sbjct: 162 QMPSAQLPTEAAATALSGNTTP-PTPEAAL 190
>PPCK_HAECO (P29190) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)| (Phosphoenolpyruvate carboxylase) (PEPCK) Length = 619 Score = 28.9 bits (63), Expect = 7.3 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +1 Query: 67 AVKPEYGACGVAPGCTADVVPLTV 138 A+ PEYG GVAPG + P+ V Sbjct: 320 AINPEYGFFGVAPGTSKKTNPMAV 343
>MOXJ_METEX (P16028) Protein moxJ precursor| Length = 300 Score = 28.9 bits (63), Expect = 7.3 Identities = 19/61 (31%), Positives = 29/61 (47%) Frame = +1 Query: 1 CGPASFLRTFAVDMKITVHSSKAVKPEYGACGVAPGCTADVVPLTVLDKANFDTYISVIY 180 C PA A D K T +++A KP+ G V C A+ PL++ D + + I+ Sbjct: 28 CAPAQ-----AQDTKATSKAAEAAKPDAGTLRV---CAAEQPPLSMKDGSGLENRIATTV 79 Query: 181 A 183 A Sbjct: 80 A 80
>CBP23_HORVU (P52711) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6)| (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] Length = 516 Score = 28.9 bits (63), Expect = 7.3 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 11/47 (23%) Frame = +1 Query: 193 PAPPNAVLEAGLGRAL-----------VDYREWAGRLGVDASGGRAI 300 PAP A +EAG A VD+ ++AG + VDA+ GRA+ Sbjct: 69 PAPVAAAVEAGRKEADRVEALPGHPRGVDFAQYAGYVTVDAAAGRAL 115
>ATS12_HUMAN (P58397) ADAMTS-12 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 12) (ADAM-TS 12) (ADAM-TS12) Length = 1593 Score = 28.9 bits (63), Expect = 7.3 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 5/65 (7%) Frame = -2 Query: 296 ARPPLASTPSRPAHSR*STSALPSPASRTA-----LGGAGAWKA*ITEMYVSKLALSSTV 132 +RP + +TP+ P ST A+ SP+ TA LGG W+ T+ +S L ST Sbjct: 1026 SRPRMLTTPTGPESMSTSTPAISSPSPTTASKEGDLGGK-QWQDSSTQPELSSRYLIST- 1083 Query: 131 SGTTS 117 G+TS Sbjct: 1084 -GSTS 1087
>DMI1_MEDTR (Q6RHR6) Putative ion channel DMI-1 (Does not make infections| protein 1) Length = 882 Score = 28.5 bits (62), Expect = 9.6 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Frame = -2 Query: 326 NRAPASLSRIARPPLASTPSRPAHSR*STSALPSPASRTALGGAGAWKA*ITEM---YVS 156 N ++L+ + +PPL T + P+ + + P+P +GG K +E Y S Sbjct: 5 NEESSNLNVMNKPPLKKTKTLPSLNLRVSVTPPNPNDNNGIGGTSTTKTDFSEQQWNYPS 64 Query: 155 KLALSST 135 L + ST Sbjct: 65 FLGIGST 71
>ILVD_GLUOX (Q5FN26) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)| Length = 618 Score = 28.5 bits (62), Expect = 9.6 Identities = 22/55 (40%), Positives = 26/55 (47%) Frame = -2 Query: 272 PSRPAHSR*STSALPSPASRTALGGAGAWKA*ITEMYVSKLALSSTVSGTTSAVH 108 P+R H S S + R GA AWK E VSK AL + + TTSA H Sbjct: 551 PNRTLHLAVSDSDIADRRERMNARGASAWKP-NRERVVSK-ALQAYAAMTTSAAH 603
>THRB_BOVIN (P00735) Prothrombin precursor (EC 3.4.21.5) (Coagulation factor| II) [Contains: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain] Length = 625 Score = 28.5 bits (62), Expect = 9.6 Identities = 17/56 (30%), Positives = 25/56 (44%) Frame = +1 Query: 250 REWAGRLGVDASGGRAILLNDAGARFVEATADVALDSVMPLKPTSEVLSLHPSGDD 417 RE+ GRL V SG R + + A+ + D P P +E +P GD+ Sbjct: 220 REYRGRLAVTTSGSRCLAWSSEQAKALSKDQD-----FNPAVPLAENFCRNPDGDE 270
>CCA_BORPA (Q7U367) CCA-adding enzyme (EC 2.7.7.25) (EC 2.7.7.21) (tRNA| nucleotidyltransferase) (tRNA adenylyl-/cytidylyl- transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT) Length = 364 Score = 28.5 bits (62), Expect = 9.6 Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Frame = -1 Query: 432 ELLWPVVAAGVQAENLRRGLE---RHDAVERHVGRRLHEPGAGVVEQDRAAAAGV 277 E +W V+ G+ A+ R L+ R A+ R V LH+ A E DRAAAAG+ Sbjct: 184 ERVWKEVSRGLMAQAPSRMLDVLARAGALAR-VMPELHDDAAVRAEIDRAAAAGL 237
>CCA_BORBR (Q7U391) CCA-adding enzyme (EC 2.7.7.25) (EC 2.7.7.21) (tRNA| nucleotidyltransferase) (tRNA adenylyl-/cytidylyl- transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT) Length = 364 Score = 28.5 bits (62), Expect = 9.6 Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Frame = -1 Query: 432 ELLWPVVAAGVQAENLRRGLE---RHDAVERHVGRRLHEPGAGVVEQDRAAAAGV 277 E +W V+ G+ A+ R L+ R A+ R V LH+ A E DRAAAAG+ Sbjct: 184 ERVWKEVSRGLMAQAPSRMLDVLARAGALAR-VMPELHDDAAVRAEIDRAAAAGL 237
>BRO1_DEBHA (Q6BRL3) Vacuolar protein-sorting protein BRO1 (BRO domain-containing| protein 1) Length = 970 Score = 28.5 bits (62), Expect = 9.6 Identities = 25/88 (28%), Positives = 34/88 (38%) Frame = -2 Query: 326 NRAPASLSRIARPPLASTPSRPAHSR*STSALPSPASRTALGGAGAWKA*ITEMYVSKLA 147 N +P S SR PP A P RP++S T P A T + Sbjct: 883 NESPGSYSR---PPPALPPKRPSYSAQPTPHAPPQAPYTQF----------------QPQ 923 Query: 146 LSSTVSGTTSAVHPGATPQAPYSGLTAL 63 S+ ++S+ +P PQ P SG L Sbjct: 924 ASNYTDNSSSSANPTNLPQHPDSGTNDL 951
>CAC1A_MOUSE (P97445) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2164 Score = 28.5 bits (62), Expect = 9.6 Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 3/58 (5%) Frame = -1 Query: 474 DERPAREPRDLD*HELLWPVVAAGVQAENLRR---GLERHDAVERHVGRRLHEPGAGV 310 D+RP R PR D G E RR G HD ER RR G+GV Sbjct: 890 DDRPERRPRPRDATRPARAADGEGDDGERKRRHRHGPPAHDDRERRHRRRKENQGSGV 947
>CAC1A_RAT (P54282) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide, isoform 4) (Brain calcium channel I) (BI) (RAT brain class A) (RBA-I) Length = 2212 Score = 28.5 bits (62), Expect = 9.6 Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 3/58 (5%) Frame = -1 Query: 474 DERPAREPRDLD*HELLWPVVAAGVQAENLRR---GLERHDAVERHVGRRLHEPGAGV 310 D+RP R PR D G E RR G HD ER RR G+GV Sbjct: 938 DDRPERRPRPRDATRPARAADGEGDDGERKRRHRHGPPAHDDRERRHRRRKESQGSGV 995 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,340,019 Number of Sequences: 219361 Number of extensions: 857442 Number of successful extensions: 3665 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 3541 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3656 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)