ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart08d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC135561.3| Oryza sativa (japonica cultivar-group) chromosome... 355 9e-95
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 355 9e-95
3dbj|AK071806.1| Oryza sativa (japonica cultivar-group) cDNA clon... 355 9e-95
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 355 9e-95
5gb|AC117264.2| Oryza sativa (japonica cultivar-group) chromosome... 78 3e-11
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
7gb|AE012125.1| Xanthomonas campestris pv. campestris str. ATCC 3... 50 0.007
8gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 50 0.007
9emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 46 0.11
10gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.44
11gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 44 0.44
12ref|XM_474639.1| Oryza sativa (japonica cultivar-group), predic... 42 1.8
13gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 1.8
14gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome 42 1.8
15gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genom... 42 1.8
16gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.8
17gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 42 1.8
18emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4,... 42 1.8
19ref|NM_166084.1| Drosophila melanogaster CG30079-RA (CG30079), mRNA 42 1.8
20gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.8
21dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
22dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
23gb|AC008342.12|AC008342 Drosophila melanogaster, chromosome 2R, ... 42 1.8
24gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genom... 42 1.8
25dbj|AK111313.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
26gb|BT021423.1| Drosophila melanogaster HL05615 full insert cDNA 42 1.8
27dbj|AK059787.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
28gb|AE003811.3| Drosophila melanogaster chromosome 2R, section 39... 42 1.8
29gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.8
30ref|XM_550480.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.9
31ref|XM_511022.1| PREDICTED: Pan troglodytes similar to TNFRSF1A-... 40 6.9
32ref|XM_470106.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.9
33ref|XM_464371.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.9
34gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
35gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complet... 40 6.9
36gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
37ref|XM_362769.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 6.9
38gb|BC004491.2| Homo sapiens TNFRSF1A-associated via death domain... 40 6.9
39gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 6.9
40ref|NM_013119.1| Rattus norvegicus sodium channel, voltage-gated... 40 6.9
41gb|AY575851.1| Homo sapiens TNFRSF1A-associated via death domain... 40 6.9
42ref|XM_001001591.1| PREDICTED: Mus musculus sodium channel, volt... 40 6.9
43ref|XM_001001601.1| PREDICTED: Mus musculus sodium channel, volt... 40 6.9
44ref|XM_001003034.1| PREDICTED: Mus musculus sodium channel, volt... 40 6.9
45ref|XM_001003027.1| PREDICTED: Mus musculus sodium channel, volt... 40 6.9
46ref|XM_980233.1| PREDICTED: Mus musculus sodium channel, voltage... 40 6.9
47ref|XM_909273.2| PREDICTED: Mus musculus sodium channel, voltage... 40 6.9
48gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 40 6.9
49gb|BT007794.1| Synthetic construct Homo sapiens TNFRSF1A-associa... 40 6.9
50gb|BT006934.1| Homo sapiens TNFRSF1A-associated via death domain... 40 6.9
51dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 40 6.9
52dbj|AK090673.1| Homo sapiens cDNA FLJ33354 fis, clone BRACE20051... 40 6.9
53gb|AE012454.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.9
54gb|AE012347.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.9
55dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.9
56dbj|AK148881.1| Mus musculus 2 days neonate sympathetic ganglion... 40 6.9
57ref|NM_153425.1| Homo sapiens TNFRSF1A-associated via death doma... 40 6.9
58ref|NM_003789.2| Homo sapiens TNFRSF1A-associated via death doma... 40 6.9
59gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.9
60gb|AY026914.1| Pseudomonas putida strain P111 czrBA operon, part... 40 6.9
61dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
62dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
63dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
64gb|AC040160.4|AC040160 Homo sapiens chromosome 16 clone CTC-277H... 40 6.9
65gb|AC074143.5| Homo sapiens chromosome 16 clone RP11-5A19, compl... 40 6.9
66gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genom... 40 6.9
67gb|AY995114.1| Homo sapiens tumor necrosis factor receptor 1-ass... 40 6.9
68gb|AE004885.1| Pseudomonas aeruginosa PAO1, section 446 of 529 o... 40 6.9
69gb|AE004679.1| Pseudomonas aeruginosa PAO1, section 240 of 529 o... 40 6.9
70ref|XM_579373.1| PREDICTED: Rattus norvegicus hypothetical gene ... 40 6.9
71gb|AF098407.1|AF098407 Teloschistes villosus strain BCC-Lich 131... 40 6.9
72dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
73dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
74dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 6.9
75dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.9
76dbj|AP002805.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
77dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic ... 40 6.9
78emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134... 40 6.9
79gb|AY892172.1| Synthetic construct Homo sapiens clone FLH014254.... 40 6.9
80gb|AY889716.1| Synthetic construct Homo sapiens clone FLH014258.... 40 6.9
81dbj|AP004090.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
82dbj|AK121940.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.9
83dbj|AK106949.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.9
84gb|AY110714.1| Zea mays CL20291_1 mRNA sequence 40 6.9
85emb|Y00766.1|RNSCIII Rat mRNA for brain sodium channel III 40 6.9
86emb|AJ311615.1|HSA311615 Homo sapiens partial TRADD gene for TNF... 40 6.9
87gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
88emb|AL732638.6|CNS08C9D Oryza sativa chromosome 12, . Partial se... 40 6.9
89emb|AL713946.3|CNS07YPP Oryza sativa chromosome 12, . BAC OJ1005... 40 6.9
90emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.9
91gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 6.9
92gb|U82664.1|ECU82664 Escherichia coli minutes 9 to 11 genomic se... 40 6.9
93dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 6.9
94gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 40 6.9
95gb|L41690.1|HUMTRADD Homo sapiens TNF receptor-1 associated prot... 40 6.9
96emb|AL590429.9| Mouse DNA sequence from clone RP23-462O16 on chr... 40 6.9
97emb|AL772235.4| Mouse DNA sequence from clone RP23-155K12 on chr... 40 6.9
98gb|CP000038.1| Shigella sonnei Ss046, complete genome 40 6.9
99dbj|D89572.1| Mus musculus gene for ryudocan core protein, compl... 40 6.9
100gb|M63939.1|ECOTGT E.coli tRNA-guanine-transglycosylase (tgt) ge... 40 6.9 
>gb|AC135561.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0086N07
              map S790A, complete sequence
          Length = 178523

 Score =  355 bits (179), Expect = 9e-95
 Identities = 371/435 (85%), Gaps = 9/435 (2%)
 Strand = Plus / Minus

                                                                          
Query: 83     cgccatggcgcaggttctccgaggccgaggccgccgtgaaccgctccgtcgcggcgagca 142
              |||||||||| | | || |||||||||||| |||||| |||||| |||| |||||||   
Sbjct: 101383 cgccatggcgtaagctcaccgaggccgaggacgccgtcaaccgcgccgtggcggcgacac 101324

                                                                          
Query: 143    gcgtcggcnagtacttcaagctcgaagcgcgcaagagctccttcaccaaggagctgcgcg 202
              ||||||||  |||||||||||| || |||||||||||||| |||||||||||||| ||||
Sbjct: 101323 gcgtcggcaggtacttcaagctggaggcgcgcaagagctcattcaccaaggagctccgcg 101264

                                                                          
Query: 203    ccggcgccgccaccttcctcaccatggcatacatcatctccgtcaacgctgccatcctca 262
              ||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 101263 ccggcgccgccacgttcctcaccatggcgtacatcatctccgtcaacgccgccatcctca 101204

                                                                          
Query: 263    ccgactccggcgggccgtgcaccgtgctcgactgcaccccggcg------ggtaactcca 316
              ||||||||||||||||||||||||||  ||||||||| |||| |      ||||||||||
Sbjct: 101203 ccgactccggcgggccgtgcaccgtgagcgactgcacgccggtggtcgtcggtaactcca 101144

                                                                          
Query: 317    cggccgctcctgggccggagtgcatgctcggcgcgtccaacccggggtaccagcagtgcc 376
              ||||||  || || || ||||||| | | ||   ||| ||||| |||||| |||||||||
Sbjct: 101143 cggccgtgcccggccccgagtgcacggttgg---gtctaaccccgggtacgagcagtgcc 101087

                                                                          
Query: 377    tggcgcgcaccaagagcgacctgattgttgcgacggctgtggctgctatggtcggctcct 436
              | | ||||||||||||||||||||| || |||||||| || || || ||||  || ||||
Sbjct: 101086 ttgggcgcaccaagagcgacctgatcgtcgcgacggcggtcgccgccatggctggatcct 101027

                                                                          
Query: 437    tcgccatgggcgctctcgccaacctcccgctggcgctggcccccgggatgggcgcccacg 496
              ||||||||||||| ||||| ||||||||||| |  || || ||||||||||||||| |||
Sbjct: 101026 tcgccatgggcgcgctcgctaacctcccgcttggtctagctcccgggatgggcgccaacg 100967

                             
Query: 497    cctacttcacctaca 511
              |||||||| ||||||
Sbjct: 100966 cctacttcgcctaca 100952
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  355 bits (179), Expect = 9e-95
 Identities = 371/435 (85%), Gaps = 9/435 (2%)
 Strand = Plus / Plus

                                                                            
Query: 83       cgccatggcgcaggttctccgaggccgaggccgccgtgaaccgctccgtcgcggcgagca 142
                |||||||||| | | || |||||||||||| |||||| |||||| |||| |||||||   
Sbjct: 13082697 cgccatggcgtaagctcaccgaggccgaggacgccgtcaaccgcgccgtggcggcgacac 13082756

                                                                            
Query: 143      gcgtcggcnagtacttcaagctcgaagcgcgcaagagctccttcaccaaggagctgcgcg 202
                ||||||||  |||||||||||| || |||||||||||||| |||||||||||||| ||||
Sbjct: 13082757 gcgtcggcaggtacttcaagctggaggcgcgcaagagctcattcaccaaggagctccgcg 13082816

                                                                            
Query: 203      ccggcgccgccaccttcctcaccatggcatacatcatctccgtcaacgctgccatcctca 262
                ||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 13082817 ccggcgccgccacgttcctcaccatggcgtacatcatctccgtcaacgccgccatcctca 13082876

                                                                            
Query: 263      ccgactccggcgggccgtgcaccgtgctcgactgcaccccggcg------ggtaactcca 316
                ||||||||||||||||||||||||||  ||||||||| |||| |      ||||||||||
Sbjct: 13082877 ccgactccggcgggccgtgcaccgtgagcgactgcacgccggtggtcgtcggtaactcca 13082936

                                                                            
Query: 317      cggccgctcctgggccggagtgcatgctcggcgcgtccaacccggggtaccagcagtgcc 376
                ||||||  || || || ||||||| | | ||   ||| ||||| |||||| |||||||||
Sbjct: 13082937 cggccgtgcccggccccgagtgcacggttgg---gtctaaccccgggtacgagcagtgcc 13082993

                                                                            
Query: 377      tggcgcgcaccaagagcgacctgattgttgcgacggctgtggctgctatggtcggctcct 436
                | | ||||||||||||||||||||| || |||||||| || || || ||||  || ||||
Sbjct: 13082994 ttgggcgcaccaagagcgacctgatcgtcgcgacggcggtcgccgccatggctggatcct 13083053

                                                                            
Query: 437      tcgccatgggcgctctcgccaacctcccgctggcgctggcccccgggatgggcgcccacg 496
                ||||||||||||| ||||| ||||||||||| |  || || ||||||||||||||| |||
Sbjct: 13083054 tcgccatgggcgcgctcgctaacctcccgcttggtctagctcccgggatgggcgccaacg 13083113

                               
Query: 497      cctacttcacctaca 511
                |||||||| ||||||
Sbjct: 13083114 cctacttcgcctaca 13083128
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>dbj|AK071806.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111J10, full
           insert sequence
          Length = 1925

 Score =  355 bits (179), Expect = 9e-95
 Identities = 371/435 (85%), Gaps = 9/435 (2%)
 Strand = Plus / Plus

                                                                       
Query: 83  cgccatggcgcaggttctccgaggccgaggccgccgtgaaccgctccgtcgcggcgagca 142
           |||||||||| | | || |||||||||||| |||||| |||||| |||| |||||||   
Sbjct: 68  cgccatggcgtaagctcaccgaggccgaggacgccgtcaaccgcgccgtggcggcgacac 127

                                                                       
Query: 143 gcgtcggcnagtacttcaagctcgaagcgcgcaagagctccttcaccaaggagctgcgcg 202
           ||||||||  |||||||||||| || |||||||||||||| |||||||||||||| ||||
Sbjct: 128 gcgtcggcaggtacttcaagctggaggcgcgcaagagctcattcaccaaggagctccgcg 187

                                                                       
Query: 203 ccggcgccgccaccttcctcaccatggcatacatcatctccgtcaacgctgccatcctca 262
           ||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 188 ccggcgccgccacgttcctcaccatggcgtacatcatctccgtcaacgccgccatcctca 247

                                                                       
Query: 263 ccgactccggcgggccgtgcaccgtgctcgactgcaccccggcg------ggtaactcca 316
           ||||||||||||||||||||||||||  ||||||||| |||| |      ||||||||||
Sbjct: 248 ccgactccggcgggccgtgcaccgtgagcgactgcacgccggtggtcgtcggtaactcca 307

                                                                       
Query: 317 cggccgctcctgggccggagtgcatgctcggcgcgtccaacccggggtaccagcagtgcc 376
           ||||||  || || || ||||||| | | ||   ||| ||||| |||||| |||||||||
Sbjct: 308 cggccgtgcccggccccgagtgcacggttgg---gtctaaccccgggtacgagcagtgcc 364

                                                                       
Query: 377 tggcgcgcaccaagagcgacctgattgttgcgacggctgtggctgctatggtcggctcct 436
           | | ||||||||||||||||||||| || |||||||| || || || ||||  || ||||
Sbjct: 365 ttgggcgcaccaagagcgacctgatcgtcgcgacggcggtcgccgccatggctggatcct 424

                                                                       
Query: 437 tcgccatgggcgctctcgccaacctcccgctggcgctggcccccgggatgggcgcccacg 496
           ||||||||||||| ||||| ||||||||||| |  || || ||||||||||||||| |||
Sbjct: 425 tcgccatgggcgcgctcgctaacctcccgcttggtctagctcccgggatgggcgccaacg 484

                          
Query: 497 cctacttcacctaca 511
           |||||||| ||||||
Sbjct: 485 cctacttcgcctaca 499
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  355 bits (179), Expect = 9e-95
 Identities = 371/435 (85%), Gaps = 9/435 (2%)
 Strand = Plus / Plus

                                                                            
Query: 83       cgccatggcgcaggttctccgaggccgaggccgccgtgaaccgctccgtcgcggcgagca 142
                |||||||||| | | || |||||||||||| |||||| |||||| |||| |||||||   
Sbjct: 13162876 cgccatggcgtaagctcaccgaggccgaggacgccgtcaaccgcgccgtggcggcgacac 13162935

                                                                            
Query: 143      gcgtcggcnagtacttcaagctcgaagcgcgcaagagctccttcaccaaggagctgcgcg 202
                ||||||||  |||||||||||| || |||||||||||||| |||||||||||||| ||||
Sbjct: 13162936 gcgtcggcaggtacttcaagctggaggcgcgcaagagctcattcaccaaggagctccgcg 13162995

                                                                            
Query: 203      ccggcgccgccaccttcctcaccatggcatacatcatctccgtcaacgctgccatcctca 262
                ||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 13162996 ccggcgccgccacgttcctcaccatggcgtacatcatctccgtcaacgccgccatcctca 13163055

                                                                            
Query: 263      ccgactccggcgggccgtgcaccgtgctcgactgcaccccggcg------ggtaactcca 316
                ||||||||||||||||||||||||||  ||||||||| |||| |      ||||||||||
Sbjct: 13163056 ccgactccggcgggccgtgcaccgtgagcgactgcacgccggtggtcgtcggtaactcca 13163115

                                                                            
Query: 317      cggccgctcctgggccggagtgcatgctcggcgcgtccaacccggggtaccagcagtgcc 376
                ||||||  || || || ||||||| | | ||   ||| ||||| |||||| |||||||||
Sbjct: 13163116 cggccgtgcccggccccgagtgcacggttgg---gtctaaccccgggtacgagcagtgcc 13163172

                                                                            
Query: 377      tggcgcgcaccaagagcgacctgattgttgcgacggctgtggctgctatggtcggctcct 436
                | | ||||||||||||||||||||| || |||||||| || || || ||||  || ||||
Sbjct: 13163173 ttgggcgcaccaagagcgacctgatcgtcgcgacggcggtcgccgccatggctggatcct 13163232

                                                                            
Query: 437      tcgccatgggcgctctcgccaacctcccgctggcgctggcccccgggatgggcgcccacg 496
                ||||||||||||| ||||| ||||||||||| |  || || ||||||||||||||| |||
Sbjct: 13163233 tcgccatgggcgcgctcgctaacctcccgcttggtctagctcccgggatgggcgccaacg 13163292

                               
Query: 497      cctacttcacctaca 511
                |||||||| ||||||
Sbjct: 13163293 cctacttcgcctaca 13163307



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 201      cgccggcgccgccaccttcc 220
                ||||||||||||||||||||
Sbjct: 26704210 cgccggcgccgccaccttcc 26704229
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>gb|AC117264.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_D04,
             complete sequence
          Length = 168424

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 78/91 (85%)
 Strand = Plus / Minus

                                                                         
Query: 184   ttcaccaaggagctgcgcgccggcgccgccaccttcctcaccatggcatacatcatctcc 243
             ||||||| |||||| ||||||||  |  |||| |||||||||||||| |||||| || ||
Sbjct: 97616 ttcaccacggagctccgcgccgggacgaccacgttcctcaccatggcctacatcctcgcc 97557

                                            
Query: 244   gtcaacgctgccatcctcaccgactccggcg 274
             ||||||||  |||||||| ||||||||||||
Sbjct: 97556 gtcaacgcctccatcctctccgactccggcg 97526



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 70/84 (83%)
 Strand = Plus / Minus

                                                                         
Query: 428   tcggctccttcgccatgggcgctctcgccaacctcccgctggcgctggcccccgggatgg 487
             |||||||||||  ||||||| |  |||||||||| ||  | ||||| |||||||||||||
Sbjct: 97393 tcggctccttcatcatgggcaccttcgccaacctgcccatcgcgctcgcccccgggatgg 97334

                                     
Query: 488   gcgcccacgcctacttcacctaca 511
             || || | ||||||||| ||||||
Sbjct: 97333 gcaccaatgcctacttcgcctaca 97310
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 78/91 (85%)
 Strand = Plus / Minus

                                                                            
Query: 184      ttcaccaaggagctgcgcgccggcgccgccaccttcctcaccatggcatacatcatctcc 243
                ||||||| |||||| ||||||||  |  |||| |||||||||||||| |||||| || ||
Sbjct: 15442595 ttcaccacggagctccgcgccgggacgaccacgttcctcaccatggcctacatcctcgcc 15442536

                                               
Query: 244      gtcaacgctgccatcctcaccgactccggcg 274
                ||||||||  |||||||| ||||||||||||
Sbjct: 15442535 gtcaacgcctccatcctctccgactccggcg 15442505



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 70/84 (83%)
 Strand = Plus / Minus

                                                                            
Query: 428      tcggctccttcgccatgggcgctctcgccaacctcccgctggcgctggcccccgggatgg 487
                |||||||||||  ||||||| |  |||||||||| ||  | ||||| |||||||||||||
Sbjct: 15442372 tcggctccttcatcatgggcaccttcgccaacctgcccatcgcgctcgcccccgggatgg 15442313

                                        
Query: 488      gcgcccacgcctacttcacctaca 511
                || || | ||||||||| ||||||
Sbjct: 15442312 gcaccaatgcctacttcgcctaca 15442289
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>gb|AE012125.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 33 of
            460 of the complete genome
          Length = 12110

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 193  gagctgcgcgccggcgccgccaccttcctcaccatggcatacatc 237
            |||||||  ||||||||| ||||||||||||| ||||| ||||||
Sbjct: 9485 gagctgctggccggcgccaccaccttcctcacgatggcctacatc 9441
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                           
Query: 193    gagctgcgcgccggcgccgccaccttcctcaccatggcatacatc 237
              |||||||  ||||||||| ||||||||||||| ||||| ||||||
Sbjct: 363755 gagctgctggccggcgccaccaccttcctcacgatggcctacatc 363711



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 256     atcctcaccgactccggcgg 275
               ||||||||||||||||||||
Sbjct: 2099376 atcctcaccgactccggcgg 2099395



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    agctgcgcgccggcgccgcc 213
              ||||||||||||||||||||
Sbjct: 963778 agctgcgcgccggcgccgcc 963797
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 254     ccatcctcaccgactccggcggg 276
               |||||||||||||||||||||||
Sbjct: 3052537 ccatcctcaccgactccggcggg 3052515
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 255     catcctcaccgactccggcggg 276
               ||||||||||||||||||||||
Sbjct: 3130353 catcctcaccgactccggcggg 3130332



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 255     catcctcaccgactccggcgg 275
               |||||||||||||||||||||
Sbjct: 4945616 catcctcaccgactccggcgg 4945596



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 189     caaggagctgcgcgccggcg 208
               ||||||||||||||||||||
Sbjct: 4351191 caaggagctgcgcgccggcg 4351210
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 254     ccatcctcaccgactccggcgg 275
               ||||||||||||||||||||||
Sbjct: 1419692 ccatcctcaccgactccggcgg 1419671
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>ref|XM_474639.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1296

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 265 gactccggcgggccgtgcaccgtgctcga 293
           |||||||||| ||||||||||||| ||||
Sbjct: 733 gactccggcgagccgtgcaccgtgttcga 761
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 101     ccgaggccgaggccgccgtga 121
               |||||||||||||||||||||
Sbjct: 2967486 ccgaggccgaggccgccgtga 2967506
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>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 462     cccgctggcgctggcccccgg 482
               |||||||||||||||||||||
Sbjct: 2060559 cccgctggcgctggcccccgg 2060579
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>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete
              sequence
          Length = 138345

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 192    ggagctgcgcgccggcgccgc 212
              |||||||||||||||||||||
Sbjct: 134655 ggagctgcgcgccggcgccgc 134675
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 192      ggagctgcgcgccggcgccgc 212
                |||||||||||||||||||||
Sbjct: 27434448 ggagctgcgcgccggcgccgc 27434468



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 200      gcgccggcgccgccaccttc 219
                ||||||||||||||||||||
Sbjct: 33967677 gcgccggcgccgccaccttc 33967696



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 203     ccggcgccgccaccttcctc 222
               ||||||||||||||||||||
Sbjct: 2272863 ccggcgccgccaccttcctc 2272844
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 192    ggagctgcgcgccggcgccgccacc 216
              |||||||||| ||||||||||||||
Sbjct: 919575 ggagctgcgcaccggcgccgccacc 919551
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>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19,
             complete sequence
          Length = 144144

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 265   gactccggcgggccgtgcaccgtgctcga 293
             |||||||||| ||||||||||||| ||||
Sbjct: 93509 gactccggcgagccgtgcaccgtgttcga 93481
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>ref|NM_166084.1| Drosophila melanogaster CG30079-RA (CG30079), mRNA
          Length = 1538

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 201 cgccggcgccgccaccttcctcacc 225
           |||||||||||||||||||| ||||
Sbjct: 630 cgccggcgccgccaccttccccacc 606
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 462    cccgctggcgctggcccccgg 482
              |||||||||||||||||||||
Sbjct: 544417 cccgctggcgctggcccccgg 544397
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 265     gactccggcgggccgtgcaccgtgctcga 293
               |||||||||| ||||||||||||| ||||
Sbjct: 5117236 gactccggcgagccgtgcaccgtgttcga 5117208
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 192      ggagctgcgcgccggcgccgc 212
                |||||||||||||||||||||
Sbjct: 27525771 ggagctgcgcgccggcgccgc 27525791



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 200      gcgccggcgccgccaccttc 219
                ||||||||||||||||||||
Sbjct: 34058149 gcgccggcgccgccaccttc 34058168



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 203     ccggcgccgccaccttcctc 222
               ||||||||||||||||||||
Sbjct: 2272875 ccggcgccgccaccttcctc 2272856
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>gb|AC008342.12|AC008342 Drosophila melanogaster, chromosome 2R, region 51F-51F, BAC clone
             BACR33K06, complete sequence
          Length = 175007

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 201   cgccggcgccgccaccttcctcacc 225
             |||||||||||||||||||| ||||
Sbjct: 69574 cgccggcgccgccaccttccccacc 69598
to top
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete
              sequence
          Length = 123406

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 192    ggagctgcgcgccggcgccgc 212
              |||||||||||||||||||||
Sbjct: 116066 ggagctgcgcgccggcgccgc 116046
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>dbj|AK111313.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-C05, full
           insert sequence
          Length = 1014

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 192 ggagctgcgcgccggcgccgc 212
           |||||||||||||||||||||
Sbjct: 512 ggagctgcgcgccggcgccgc 492
to top
>gb|BT021423.1| Drosophila melanogaster HL05615 full insert cDNA
          Length = 2462

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 201 cgccggcgccgccaccttcctcacc 225
           |||||||||||||||||||| ||||
Sbjct: 621 cgccggcgccgccaccttccccacc 597
to top
>dbj|AK059787.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-D10, full
           insert sequence
          Length = 961

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 192 ggagctgcgcgccggcgccgc 212
           |||||||||||||||||||||
Sbjct: 516 ggagctgcgcgccggcgccgc 496
to top
>gb|AE003811.3| Drosophila melanogaster chromosome 2R, section 39 of 73 of the complete
              sequence
          Length = 255652

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 201    cgccggcgccgccaccttcctcacc 225
              |||||||||||||||||||| ||||
Sbjct: 111076 cgccggcgccgccaccttccccacc 111100
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 95      ggttctccgaggccgaggccg 115
               |||||||||||||||||||||
Sbjct: 2307425 ggttctccgaggccgaggccg 2307405
to top
>ref|XM_550480.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2475

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 200  gcgccggcgccgccaccttc 219
            ||||||||||||||||||||
Sbjct: 2423 gcgccggcgccgccaccttc 2404
to top
>ref|XM_511022.1| PREDICTED: Pan troglodytes similar to TNFRSF1A-associated via death
           domain isoform 1; tumor necrosis factor
           receptor-1-associated protein; TNFR1-associated death
           domain protein; tumor necrosis factor receptor type 1
           associated death domain protein (LOC454154), mRNA
          Length = 813

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ggagctgcgcgccggcgccg 211
           ||||||||||||||||||||
Sbjct: 54  ggagctgcgcgccggcgccg 73
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>ref|XM_470106.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1283

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 200 gcgccggcgccgccaccttc 219
           ||||||||||||||||||||
Sbjct: 190 gcgccggcgccgccaccttc 209
to top
>ref|XM_464371.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 675

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 ccggcgccgccaccttcctc 222
           ||||||||||||||||||||
Sbjct: 223 ccggcgccgccaccttcctc 204
to top
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0087J09, complete sequence
          Length = 153351

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    ccggcgccgccaccttcctc 222
              ||||||||||||||||||||
Sbjct: 108052 ccggcgccgccaccttcctc 108071
to top
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence
          Length = 114996

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   agctcgaagcgcgcaagagc 180
             ||||||||||||||||||||
Sbjct: 50904 agctcgaagcgcgcaagagc 50885
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>gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0004D06, complete sequence
          Length = 157547

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   cgccggcgccgccaccttcc 220
             ||||||||||||||||||||
Sbjct: 91784 cgccggcgccgccaccttcc 91803
to top
>ref|XM_362769.1| Magnaporthe grisea 70-15 hypothetical protein (MG08279.4) partial
           mRNA
          Length = 1848

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 224 ccatggcatacatcatctccgtcaacgc 251
           ||||| ||||||||||| ||||||||||
Sbjct: 146 ccatgtcatacatcatcgccgtcaacgc 173
to top
>gb|BC004491.2| Homo sapiens TNFRSF1A-associated via death domain, transcript
           variant 1, mRNA (cDNA clone MGC:11078 IMAGE:3689007),
           complete cds
          Length = 1466

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ggagctgcgcgccggcgccg 211
           ||||||||||||||||||||
Sbjct: 405 ggagctgcgcgccggcgccg 424
to top
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 256     atcctcaccgactccggcgg 275
               ||||||||||||||||||||
Sbjct: 3162533 atcctcaccgactccggcgg 3162552
to top
>ref|NM_013119.1| Rattus norvegicus sodium channel, voltage-gated, type III, alpha
           polypeptide (Scn3a), mRNA
          Length = 6822

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 360 ggggtaccagcagtgcctgg 379
           ||||||||||||||||||||
Sbjct: 438 ggggtaccagcagtgcctgg 419
to top
>gb|AY575851.1| Homo sapiens TNFRSF1A-associated via death domain (TRADD) gene,
            complete cds
          Length = 9002

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 192  ggagctgcgcgccggcgccg 211
            ||||||||||||||||||||
Sbjct: 6412 ggagctgcgcgccggcgccg 6431
to top
>ref|XM_001001591.1| PREDICTED: Mus musculus sodium channel, voltage-gated, type III,
           alpha, transcript variant 2 (Scn3a), mRNA
          Length = 6968

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 360 ggggtaccagcagtgcctgg 379
           ||||||||||||||||||||
Sbjct: 304 ggggtaccagcagtgcctgg 285
to top
>ref|XM_001001601.1| PREDICTED: Mus musculus sodium channel, voltage-gated, type III,
           alpha, transcript variant 3 (Scn3a), mRNA
          Length = 6995

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 360 ggggtaccagcagtgcctgg 379
           ||||||||||||||||||||
Sbjct: 304 ggggtaccagcagtgcctgg 285
to top
>ref|XM_001003034.1| PREDICTED: Mus musculus sodium channel, voltage-gated, type III,
           alpha, transcript variant 3 (Scn3a), mRNA
          Length = 6968

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 360 ggggtaccagcagtgcctgg 379
           ||||||||||||||||||||
Sbjct: 304 ggggtaccagcagtgcctgg 285
to top
>ref|XM_001003027.1| PREDICTED: Mus musculus sodium channel, voltage-gated, type III,
           alpha, transcript variant 2 (Scn3a), mRNA
          Length = 6995

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 360 ggggtaccagcagtgcctgg 379
           ||||||||||||||||||||
Sbjct: 304 ggggtaccagcagtgcctgg 285
to top
>ref|XM_980233.1| PREDICTED: Mus musculus sodium channel, voltage-gated, type III,
           alpha, transcript variant 4 (Scn3a), mRNA
          Length = 6968

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 360 ggggtaccagcagtgcctgg 379
           ||||||||||||||||||||
Sbjct: 304 ggggtaccagcagtgcctgg 285
to top
>ref|XM_909273.2| PREDICTED: Mus musculus sodium channel, voltage-gated, type III,
           alpha, transcript variant 1 (Scn3a), mRNA
          Length = 6995

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 360 ggggtaccagcagtgcctgg 379
           ||||||||||||||||||||
Sbjct: 304 ggggtaccagcagtgcctgg 285
to top
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    atcctcaccgactccggcgg 275
              ||||||||||||||||||||
Sbjct: 425616 atcctcaccgactccggcgg 425635
to top
>gb|BT007794.1| Synthetic construct Homo sapiens TNFRSF1A-associated via death
           domain mRNA, partial cds
          Length = 939

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ggagctgcgcgccggcgccg 211
           ||||||||||||||||||||
Sbjct: 348 ggagctgcgcgccggcgccg 367
to top
>gb|BT006934.1| Homo sapiens TNFRSF1A-associated via death domain mRNA, complete
           cds
          Length = 939

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ggagctgcgcgccggcgccg 211
           ||||||||||||||||||||
Sbjct: 348 ggagctgcgcgccggcgccg 367
to top
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    atcctcaccgactccggcgg 275
              ||||||||||||||||||||
Sbjct: 425616 atcctcaccgactccggcgg 425635
to top
>dbj|AK090673.1| Homo sapiens cDNA FLJ33354 fis, clone BRACE2005124, highly similar
           to TUMOR NECROSIS FACTOR RECEPTOR TYPE 1 ASSOCIATED
           DEATH DOMAIN PROTEIN
          Length = 1833

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ggagctgcgcgccggcgccg 211
           ||||||||||||||||||||
Sbjct: 792 ggagctgcgcgccggcgccg 811
to top
>gb|AE012454.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 362
            of 460 of the complete genome
          Length = 11605

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 194  agctgcgcgccggcgccgcc 213
            ||||||||||||||||||||
Sbjct: 8172 agctgcgcgccggcgccgcc 8153
to top
>gb|AE012347.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 255
            of 460 of the complete genome
          Length = 14797

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 256  atcctcaccgactccggcgg 275
            ||||||||||||||||||||
Sbjct: 4734 atcctcaccgactccggcgg 4715
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 101     ccgaggccgaggccgccgtg 120
               ||||||||||||||||||||
Sbjct: 4405191 ccgaggccgaggccgccgtg 4405210
to top
>dbj|AK148881.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN
           full-length enriched library, clone:7120459A07
           product:Voltage-gated sodium channel (SCN3A) (Fragment)
           homolog [Homo sapiens], full insert sequence
          Length = 3043

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 360 ggggtaccagcagtgcctgg 379
           ||||||||||||||||||||
Sbjct: 301 ggggtaccagcagtgcctgg 282
to top
>ref|NM_153425.1| Homo sapiens TNFRSF1A-associated via death domain (TRADD),
           transcript variant 2, mRNA
          Length = 1959

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ggagctgcgcgccggcgccg 211
           ||||||||||||||||||||
Sbjct: 898 ggagctgcgcgccggcgccg 917
to top
>ref|NM_003789.2| Homo sapiens TNFRSF1A-associated via death domain (TRADD),
           transcript variant 1, mRNA
          Length = 1482

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ggagctgcgcgccggcgccg 211
           ||||||||||||||||||||
Sbjct: 421 ggagctgcgcgccggcgccg 440
to top
>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0081A17, from chromosome 3, complete sequence
          Length = 134821

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ccggcgccgccaccttcctc 222
             ||||||||||||||||||||
Sbjct: 53193 ccggcgccgccaccttcctc 53212
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>gb|AY026914.1| Pseudomonas putida strain P111 czrBA operon, partial sequence; ben
            operon and ant operon, complete sequence; and catRBCA
            operon, partial sequence; and unknown gene
          Length = 15769

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 189  caaggagctgcgcgccggcgccgccacc 216
            ||||||||||||| ||||||| ||||||
Sbjct: 1528 caaggagctgcgcaccggcgcggccacc 1555
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 203     ccggcgccgccaccttcctc 222
               ||||||||||||||||||||
Sbjct: 4832606 ccggcgccgccaccttcctc 4832625



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 203     ccggcgccgccaccttcctc 222
               ||||||||||||||||||||
Sbjct: 3823304 ccggcgccgccaccttcctc 3823323
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    gcgccggcgccgccaccttc 219
              ||||||||||||||||||||
Sbjct: 600645 gcgccggcgccgccaccttc 600626
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 203     ccggcgccgccaccttcctc 222
               ||||||||||||||||||||
Sbjct: 4781040 ccggcgccgccaccttcctc 4781059



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    ccggcgccgccaccttcctc 222
              ||||||||||||||||||||
Sbjct: 690242 ccggcgccgccaccttcctc 690261
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>gb|AC040160.4|AC040160 Homo sapiens chromosome 16 clone CTC-277H1, complete sequence
          Length = 209574

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 192    ggagctgcgcgccggcgccg 211
              ||||||||||||||||||||
Sbjct: 183354 ggagctgcgcgccggcgccg 183373
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>gb|AC074143.5| Homo sapiens chromosome 16 clone RP11-5A19, complete sequence
          Length = 152952

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 192    ggagctgcgcgccggcgccg 211
              ||||||||||||||||||||
Sbjct: 124094 ggagctgcgcgccggcgccg 124075
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>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete
             sequence
          Length = 172337

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   gcgccggcgccgccaccttc 219
             ||||||||||||||||||||
Sbjct: 90014 gcgccggcgccgccaccttc 89995
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>gb|AY995114.1| Homo sapiens tumor necrosis factor receptor 1-associated death domain
            protein (TRADD) gene, complete cds
          Length = 12021

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 192  ggagctgcgcgccggcgccg 211
            ||||||||||||||||||||
Sbjct: 6841 ggagctgcgcgccggcgccg 6860
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>gb|AE004885.1| Pseudomonas aeruginosa PAO1, section 446 of 529 of the complete
            genome
          Length = 13223

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                    
Query: 472  ctggcccccgggatgggcgcccacgcctacttcacctaca 511
            ||||||||||| ||||||  | |||||| |||||||||||
Sbjct: 9023 ctggcccccggcatgggcctcaacgccttcttcacctaca 9062
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>gb|AE004679.1| Pseudomonas aeruginosa PAO1, section 240 of 529 of the complete
            genome
          Length = 10042

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 189  caaggagctgcgcgccggcgccgccacc 216
            ||||||||||||| ||||||| ||||||
Sbjct: 3586 caaggagctgcgcaccggcgcggccacc 3559
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>ref|XM_579373.1| PREDICTED: Rattus norvegicus hypothetical gene supported by
           NM_013119 (LOC497770), mRNA
          Length = 6816

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 360 ggggtaccagcagtgcctgg 379
           ||||||||||||||||||||
Sbjct: 437 ggggtaccagcagtgcctgg 418
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>gb|AF098407.1|AF098407 Teloschistes villosus strain BCC-Lich 13174 18S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 1, 5.8S
           ribosomal RNA gene and internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 866

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 462 cccgctggcgctggcccccg 481
           ||||||||||||||||||||
Sbjct: 412 cccgctggcgctggcccccg 431
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>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1115_B01
          Length = 129329

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ccggcgccgccaccttcctc 222
             ||||||||||||||||||||
Sbjct: 61630 ccggcgccgccaccttcctc 61649
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>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1073_F05
          Length = 124252

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ccggcgccgccaccttcctc 222
             ||||||||||||||||||||
Sbjct: 23199 ccggcgccgccaccttcctc 23218
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 101    ccgaggccgaggccgccgtg 120
              ||||||||||||||||||||
Sbjct: 675547 ccgaggccgaggccgccgtg 675566
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 101     ccgaggccgaggccgccgtg 120
               ||||||||||||||||||||
Sbjct: 4150878 ccgaggccgaggccgccgtg 4150897
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>dbj|AP002805.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0004I20
          Length = 94135

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   gcgccggcgccgccaccttc 219
             ||||||||||||||||||||
Sbjct: 77262 gcgccggcgccgccaccttc 77243
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>dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic DNA, chromosome 6,
            PAC clone:P0029D06
          Length = 150120

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 200  gcgccggcgccgccaccttc 219
            ||||||||||||||||||||
Sbjct: 7073 gcgccggcgccgccaccttc 7054
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>emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134_A05 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 120825

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    ccggcgccgccaccttcctc 222
              ||||||||||||||||||||
Sbjct: 105816 ccggcgccgccaccttcctc 105797
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>gb|AY892172.1| Synthetic construct Homo sapiens clone FLH014254.01L
           TNFRSF1A-associated via death domain (TRADD) mRNA,
           partial cds
          Length = 939

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ggagctgcgcgccggcgccg 211
           ||||||||||||||||||||
Sbjct: 348 ggagctgcgcgccggcgccg 367
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>gb|AY889716.1| Synthetic construct Homo sapiens clone FLH014258.01X
           TNFRSF1A-associated via death domain (TRADD) mRNA,
           complete cds
          Length = 939

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ggagctgcgcgccggcgccg 211
           ||||||||||||||||||||
Sbjct: 348 ggagctgcgcgccggcgccg 367
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>dbj|AP004090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1399_H05
          Length = 147670

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ccggcgccgccaccttcctc 222
             ||||||||||||||||||||
Sbjct: 47137 ccggcgccgccaccttcctc 47156
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>dbj|AK121940.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D18, full
           insert sequence
          Length = 1515

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 200 gcgccggcgccgccaccttc 219
           ||||||||||||||||||||
Sbjct: 203 gcgccggcgccgccaccttc 222
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>dbj|AK106949.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-E02, full
           insert sequence
          Length = 855

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 99  ctccgaggccgaggccgccgtgaaccgc 126
           |||||||||||||||||| || ||||||
Sbjct: 311 ctccgaggccgaggccgctgtcaaccgc 338
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>gb|AY110714.1| Zea mays CL20291_1 mRNA sequence
          Length = 620

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 101 ccgaggccgaggccgccgtg 120
           ||||||||||||||||||||
Sbjct: 329 ccgaggccgaggccgccgtg 348
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>emb|Y00766.1|RNSCIII Rat mRNA for brain sodium channel III
          Length = 6822

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 360 ggggtaccagcagtgcctgg 379
           ||||||||||||||||||||
Sbjct: 438 ggggtaccagcagtgcctgg 419
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>emb|AJ311615.1|HSA311615 Homo sapiens partial TRADD gene for TNFRSF1A-associated via death
           domain, exons 3-4
          Length = 927

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ggagctgcgcgccggcgccg 211
           ||||||||||||||||||||
Sbjct: 504 ggagctgcgcgccggcgccg 523
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 203     ccggcgccgccaccttcctc 222
               ||||||||||||||||||||
Sbjct: 4832587 ccggcgccgccaccttcctc 4832606



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 203     ccggcgccgccaccttcctc 222
               ||||||||||||||||||||
Sbjct: 3823278 ccggcgccgccaccttcctc 3823297
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>emb|AL732638.6|CNS08C9D Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0010K22
             of library OSJNBa from chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 92728

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   ccggcgccgccaccttcctc 222
             ||||||||||||||||||||
Sbjct: 16741 ccggcgccgccaccttcctc 16722
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>emb|AL713946.3|CNS07YPP Oryza sativa chromosome 12, . BAC OJ1005_B07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 161762

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   ccggcgccgccaccttcctc 222
             ||||||||||||||||||||
Sbjct: 14525 ccggcgccgccaccttcctc 14506
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>emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 141053

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    ccggcgccgccaccttcctc 222
              ||||||||||||||||||||
Sbjct: 127354 ccggcgccgccaccttcctc 127335
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    atcctcaccgactccggcgg 275
              ||||||||||||||||||||
Sbjct: 490023 atcctcaccgactccggcgg 490042
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>gb|U82664.1|ECU82664 Escherichia coli minutes 9 to 11 genomic sequence
          Length = 139818

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  atcctcaccgactccggcgg 275
            ||||||||||||||||||||
Sbjct: 5842 atcctcaccgactccggcgg 5861
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    atcctcaccgactccggcgg 275
              ||||||||||||||||||||
Sbjct: 490021 atcctcaccgactccggcgg 490040
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>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 256    atcctcaccgactccggcgg 275
              ||||||||||||||||||||
Sbjct: 317517 atcctcaccgactccggcgg 317498
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>gb|L41690.1|HUMTRADD Homo sapiens TNF receptor-1 associated protein (TRADD) mRNA, 3' end
           of cds
          Length = 1435

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ggagctgcgcgccggcgccg 211
           ||||||||||||||||||||
Sbjct: 396 ggagctgcgcgccggcgccg 415
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>emb|AL590429.9| Mouse DNA sequence from clone RP23-462O16 on chromosome 2, complete
              sequence
          Length = 190669

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    cttcctcaccatggcataca 235
              ||||||||||||||||||||
Sbjct: 168305 cttcctcaccatggcataca 168324
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>emb|AL772235.4| Mouse DNA sequence from clone RP23-155K12 on chromosome 2, complete
              sequence
          Length = 190410

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 360    ggggtaccagcagtgcctgg 379
              ||||||||||||||||||||
Sbjct: 183430 ggggtaccagcagtgcctgg 183411
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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    atcctcaccgactccggcgg 275
              ||||||||||||||||||||
Sbjct: 411486 atcctcaccgactccggcgg 411505
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>dbj|D89572.1| Mus musculus gene for ryudocan core protein, complete cds
          Length = 19730

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   cttcctcaccatggcataca 235
             ||||||||||||||||||||
Sbjct: 17277 cttcctcaccatggcataca 17258
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>gb|M63939.1|ECOTGT E.coli tRNA-guanine-transglycosylase (tgt) gene, complete cds
          Length = 1823

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 atcctcaccgactccggcgg 275
           ||||||||||||||||||||
Sbjct: 471 atcctcaccgactccggcgg 490


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,330,781
Number of Sequences: 3902068
Number of extensions: 3330781
Number of successful extensions: 71764
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68595
Number of HSP's gapped (non-prelim): 3169
length of query: 513
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 490
effective length of database: 17,143,297,704
effective search space: 8400215874960
effective search space used: 8400215874960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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