ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart08d03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_189879.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1077 Score = 502 bits (253), Expect = e-139 Identities = 379/421 (90%) Strand = Plus / Plus Query: 95 accatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgat 154 ||||||||||| |||||||||||||| ||||| ||||||||||||||| ||||||||||| Sbjct: 89 accatgaagttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgat 148 Query: 155 gacgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgat 214 ||||||||||||||||| ||| ||||||||| ||||| |||||||| ||| ||| Sbjct: 149 gacgaccagaagctgcgtgcattttttgacaagaggatctctcaggaggtcagtggcgat 208 Query: 215 cttctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcag 274 |||||| |||||||||||||| ||| |||||||||||||||| || ||||| |||||| Sbjct: 209 gctctgggcgaggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcag 268 Query: 275 ggtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagg 334 |||||||| |||||||| |||||||| ||| |||| |||||||||||||| ||||||||| Sbjct: 269 ggtttccctatgaagcagggagtgctcactgctggacgtgtccgccttcttcttcacagg 328 Query: 335 ggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtc 394 |||||||||||||||||||| | |||||||||| |||||||||||||||| ||||| ||| Sbjct: 329 ggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaagtctgtc 388 Query: 395 cgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggt 454 ||||||||||| |||||||| ||||| |||||||| |||||||||||||||||||||||| Sbjct: 389 cgtggttgcatcgtcagccaggacctatctgttattaacttggtgattgtcaagaagggt 448 Query: 455 gagaatgatctaccaggccttactgacactgagaagcccaggatgaggggacccaagagg 514 |||||||| || || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 gagaatgacctgcctggccttactgacactgagaagcccaggatgaggggacccaagagg 508 Query: 515 g 515 | Sbjct: 509 g 509
>dbj|AK069465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022D14, full insert sequence Length = 1078 Score = 502 bits (253), Expect = e-139 Identities = 379/421 (90%) Strand = Plus / Plus Query: 95 accatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgat 154 ||||||||||| |||||||||||||| ||||| ||||||||||||||| ||||||||||| Sbjct: 90 accatgaagttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgat 149 Query: 155 gacgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgat 214 ||||||||||||||||| ||| ||||||||| ||||| |||||||| ||| ||| Sbjct: 150 gacgaccagaagctgcgtgcattttttgacaagaggatctctcaggaggtcagtggcgat 209 Query: 215 cttctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcag 274 |||||| |||||||||||||| ||| |||||||||||||||| || ||||| |||||| Sbjct: 210 gctctgggcgaggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcag 269 Query: 275 ggtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagg 334 |||||||| |||||||| |||||||| ||| |||| |||||||||||||| ||||||||| Sbjct: 270 ggtttccctatgaagcagggagtgctcactgctggacgtgtccgccttcttcttcacagg 329 Query: 335 ggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtc 394 |||||||||||||||||||| | |||||||||| |||||||||||||||| ||||| ||| Sbjct: 330 ggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaagtctgtc 389 Query: 395 cgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggt 454 ||||||||||| |||||||| ||||| |||||||| |||||||||||||||||||||||| Sbjct: 390 cgtggttgcatcgtcagccaggacctatctgttattaacttggtgattgtcaagaagggt 449 Query: 455 gagaatgatctaccaggccttactgacactgagaagcccaggatgaggggacccaagagg 514 |||||||| || || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 gagaatgacctgcctggccttactgacactgagaagcccaggatgaggggacccaagagg 509 Query: 515 g 515 | Sbjct: 510 g 510
>ref|XM_470801.1| Oryza sativa (japonica cultivar-group), mRNA Length = 983 Score = 428 bits (216), Expect = e-117 Identities = 369/420 (87%) Strand = Plus / Plus Query: 96 ccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatg 155 |||||||||| |||||||| ||||| ||||| ||||||||||||||| |||||||||||| Sbjct: 40 ccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatg 99 Query: 156 acgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatc 215 ||||||||||||| ||| ||||||||||||| ||||||||||| || ||||||| Sbjct: 100 acgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtggtgatg 159 Query: 216 ttctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagg 275 ||| || || ||||||||||| ||| | |||||||||||||| |||||||| ||||| | Sbjct: 160 ctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaag 219 Query: 276 gtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggg 335 ||||||| |||||||| || ||||| |||||||| |||||||||||||| || ||||||| Sbjct: 220 gtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacaggg 279 Query: 336 gcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtcc 395 | || || ||||||||||| | |||||||||| ||||||||||||| || ||||| |||| Sbjct: 280 gtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtcc 339 Query: 396 gtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtg 455 |||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||| Sbjct: 340 gtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaagggtg 399 Query: 456 agaatgatctaccaggccttactgacactgagaagcccaggatgaggggacccaagaggg 515 | ||||| || || ||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 400 ataatgaccttcctggcttgactgacactgagaagcccaggatgaggggacccaagaggg 459
>dbj|AK121621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045B01, full insert sequence Length = 1018 Score = 428 bits (216), Expect = e-117 Identities = 369/420 (87%) Strand = Plus / Plus Query: 96 ccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatg 155 |||||||||| |||||||| ||||| ||||| ||||||||||||||| |||||||||||| Sbjct: 38 ccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatg 97 Query: 156 acgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatc 215 ||||||||||||| ||| ||||||||||||| ||||||||||| || ||||||| Sbjct: 98 acgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtggtgatg 157 Query: 216 ttctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagg 275 ||| || || ||||||||||| ||| | |||||||||||||| |||||||| ||||| | Sbjct: 158 ctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaag 217 Query: 276 gtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggg 335 ||||||| |||||||| || ||||| |||||||| |||||||||||||| || ||||||| Sbjct: 218 gtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacaggg 277 Query: 336 gcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtcc 395 | || || ||||||||||| | |||||||||| ||||||||||||| || ||||| |||| Sbjct: 278 gtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtcc 337 Query: 396 gtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtg 455 |||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||| Sbjct: 338 gtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaagggtg 397 Query: 456 agaatgatctaccaggccttactgacactgagaagcccaggatgaggggacccaagaggg 515 | ||||| || || ||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 398 ataatgaccttcctggcttgactgacactgagaagcccaggatgaggggacccaagaggg 457
>dbj|AK061827.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C07, full insert sequence Length = 990 Score = 428 bits (216), Expect = e-117 Identities = 369/420 (87%) Strand = Plus / Plus Query: 96 ccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatg 155 |||||||||| |||||||| ||||| ||||| ||||||||||||||| |||||||||||| Sbjct: 37 ccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatg 96 Query: 156 acgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatc 215 ||||||||||||| ||| ||||||||||||| ||||||||||| || ||||||| Sbjct: 97 acgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtggtgatg 156 Query: 216 ttctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagg 275 ||| || || ||||||||||| ||| | |||||||||||||| |||||||| ||||| | Sbjct: 157 ctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaag 216 Query: 276 gtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggg 335 ||||||| |||||||| || ||||| |||||||| |||||||||||||| || ||||||| Sbjct: 217 gtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacaggg 276 Query: 336 gcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtcc 395 | || || ||||||||||| | |||||||||| ||||||||||||| || ||||| |||| Sbjct: 277 gtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtcc 336 Query: 396 gtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtg 455 |||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||| Sbjct: 337 gtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaagggtg 396 Query: 456 agaatgatctaccaggccttactgacactgagaagcccaggatgaggggacccaagaggg 515 | ||||| || || ||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 397 ataatgaccttcctggcttgactgacactgagaagcccaggatgaggggacccaagaggg 456
>gb|U92045.1|ZMU92045 Zea mays ribosomal protein S6 RPS6-1 (rps6-1) mRNA, complete cds Length = 1039 Score = 418 bits (211), Expect = e-114 Identities = 370/423 (87%) Strand = Plus / Plus Query: 93 ccaccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcg 152 ||||||||||||| |||||||||||||| |||| |||||||| |||||| | || |||| Sbjct: 65 ccaccatgaagttcaacatcgcgaacccttccaccgggtgccaaaagaagctggaaatcg 124 Query: 153 atgacgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtg 212 ||||||||||||||||||| | |||||||| || || ||||||||||| ||||| Sbjct: 125 atgacgaccagaagctgcgtgccttttatgaccgaaggatatcccaggaggtcagtggtg 184 Query: 213 atcttctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagc 272 || |||||||||||| |||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 185 atgctctgggtgaggagttcaagggttatgtcttcaagatcatgggtggatgtgacaagc 244 Query: 273 agggtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcaca 332 | || ||||| |||||||||||||| | |||||||| ||||| || |||||||| || | Sbjct: 245 aaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgtcttctgctccata 304 Query: 333 ggggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccg 392 |||| || || ||||||||||||| ||||||||||||||||||||||||||| ||||| | Sbjct: 305 gggggactccctgcttccgtggttatggcaggcgtaatggtgagcgcaggaggaagtctg 364 Query: 393 tccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagg 452 ||||||||||||| || ||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 365 tccgtggttgcatcgtgagccaagacctatctgttatcaacttggtgattgtgaagaagg 424 Query: 453 gtgagaatgatctaccaggccttactgacactgagaagcccaggatgaggggacccaaga 512 ||||||||||||| || || || ||||||||||||||||| ||||||||||| ||||||| Sbjct: 425 gtgagaatgatctgcctggtctgactgacactgagaagccaaggatgaggggtcccaaga 484 Query: 513 ggg 515 ||| Sbjct: 485 ggg 487
>gb|AF295599.1| Zea mays ribosomal protein s6 RPS6-2 (rps6-2) mRNA, complete cds Length = 1023 Score = 387 bits (195), Expect = e-104 Identities = 366/423 (86%) Strand = Plus / Plus Query: 93 ccaccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcg 152 ||||||||||||| |||||||||||||| | || ||||||||||||||| | || |||| Sbjct: 64 ccaccatgaagttcaacatcgcgaacccgtctaccgggtgccagaagaagctggaaatcg 123 Query: 153 atgacgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtg 212 ||||||||||||| || || | |||||||| || |||||||||||||| ||||| Sbjct: 124 atgacgaccagaaactacgtgccttttatgaccgaaggatctcccaggaggtcagtggtg 183 Query: 213 atcttctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagc 272 || |||||||||||| || ||||||||| ||||||||||||||||||| ||||| || | Sbjct: 184 atgctctgggtgaggagtttaagggttatgtcttcaagatcatgggtggatgtgacaaac 243 Query: 273 agggtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcaca 332 | || ||||| |||||||||||||| || |||||||| ||||||||||||||||| |||| Sbjct: 244 aaggcttcccaatgaagcaaggagttctgacttctggtcgtgtccgccttctgctccaca 303 Query: 333 ggggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccg 392 | ||||| || |||||||| |||| ||||||||||||||||||||||||||| ||||| | Sbjct: 304 gaggcactccctgcttccgcggttatggcaggcgtaatggtgagcgcaggaggaagtctg 363 Query: 393 tccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagg 452 |||||||||| ||||| ||||||||||| ||||||||||||||||| ||||| ||||||| Sbjct: 364 tccgtggttgtattgtgagccaagacctatctgttatcaacttggtaattgttaagaagg 423 Query: 453 gtgagaatgatctaccaggccttactgacactgagaagcccaggatgaggggacccaaga 512 ||||||| ||||| || || | ||||||||||||||||| ||||||||||| ||||| | Sbjct: 424 gtgagaacgatctgcctggtttaactgacactgagaagccaaggatgaggggtcccaaaa 483 Query: 513 ggg 515 ||| Sbjct: 484 ggg 486
>gb|AY103674.1| Zea mays PCO104001 mRNA sequence Length = 1198 Score = 387 bits (195), Expect = e-104 Identities = 366/423 (86%) Strand = Plus / Plus Query: 93 ccaccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcg 152 ||||||||||||| |||||||||||||| | || ||||||||||||||| | || |||| Sbjct: 192 ccaccatgaagttcaacatcgcgaacccgtctaccgggtgccagaagaagctggaaatcg 251 Query: 153 atgacgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtg 212 ||||||||||||| || || | |||||||| || |||||||||||||| ||||| Sbjct: 252 atgacgaccagaaactacgtgccttttatgaccgaaggatctcccaggaggtcagtggtg 311 Query: 213 atcttctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagc 272 || |||||||||||| || ||||||||| ||||||||||||||||||| ||||| || | Sbjct: 312 atgctctgggtgaggagtttaagggttatgtcttcaagatcatgggtggatgtgacaaac 371 Query: 273 agggtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcaca 332 | || ||||| |||||||||||||| || |||||||| ||||||||||||||||| |||| Sbjct: 372 aaggcttcccaatgaagcaaggagttctgacttctggtcgtgtccgccttctgctccaca 431 Query: 333 ggggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccg 392 | ||||| || |||||||| |||| ||||||||||||||||||||||||||| ||||| | Sbjct: 432 gaggcactccctgcttccgcggttatggcaggcgtaatggtgagcgcaggaggaagtctg 491 Query: 393 tccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagg 452 |||||||||| ||||| ||||||||||| ||||||||||||||||| ||||| ||||||| Sbjct: 492 tccgtggttgtattgtgagccaagacctatctgttatcaacttggtaattgttaagaagg 551 Query: 453 gtgagaatgatctaccaggccttactgacactgagaagcccaggatgaggggacccaaga 512 ||||||| ||||| || || | ||||||||||||||||| ||||||||||| ||||| | Sbjct: 552 gtgagaacgatctgcctggtttaactgacactgagaagccaaggatgaggggtcccaaaa 611 Query: 513 ggg 515 ||| Sbjct: 612 ggg 614
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 264 bits (133), Expect = 3e-67 Identities = 169/181 (93%) Strand = Plus / Plus Query: 335 ggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtc 394 |||||||||||||||||||| | |||||||||| |||||||||||||||| ||||| ||| Sbjct: 25670871 ggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaagtctgtc 25670930 Query: 395 cgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggt 454 ||||||||||| |||||||| ||||| |||||||| |||||||||||||||||||||||| Sbjct: 25670931 cgtggttgcatcgtcagccaggacctatctgttattaacttggtgattgtcaagaagggt 25670990 Query: 455 gagaatgatctaccaggccttactgacactgagaagcccaggatgaggggacccaagagg 514 |||||||| || || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25670991 gagaatgacctgcctggccttactgacactgagaagcccaggatgaggggacccaagagg 25671050 Query: 515 g 515 | Sbjct: 25671051 g 25671051 Score = 135 bits (68), Expect = 2e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 225 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccga 284 ||||||||||||| ||| |||||||||||||||| || ||||| |||||||||||||| | Sbjct: 25670681 aggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcagggtttcccta 25670740 Query: 285 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagggg 336 ||||||| |||||||| ||| |||| |||||||||||||| ||||||||||| Sbjct: 25670741 tgaagcagggagtgctcactgctggacgtgtccgccttcttcttcacagggg 25670792 Score = 103 bits (52), Expect = 6e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 102 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgacc 161 |||| |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||| Sbjct: 25669518 agttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 25669577 Query: 162 agaagctg 169 |||||||| Sbjct: 25669578 agaagctg 25669585
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 264 bits (133), Expect = 3e-67 Identities = 169/181 (93%) Strand = Plus / Plus Query: 335 ggcacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtc 394 |||||||||||||||||||| | |||||||||| |||||||||||||||| ||||| ||| Sbjct: 124844 ggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggaggaagtctgtc 124903 Query: 395 cgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggt 454 ||||||||||| |||||||| ||||| |||||||| |||||||||||||||||||||||| Sbjct: 124904 cgtggttgcatcgtcagccaggacctatctgttattaacttggtgattgtcaagaagggt 124963 Query: 455 gagaatgatctaccaggccttactgacactgagaagcccaggatgaggggacccaagagg 514 |||||||| || || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124964 gagaatgacctgcctggccttactgacactgagaagcccaggatgaggggacccaagagg 125023 Query: 515 g 515 | Sbjct: 125024 g 125024 Score = 135 bits (68), Expect = 2e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 225 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccga 284 ||||||||||||| ||| |||||||||||||||| || ||||| |||||||||||||| | Sbjct: 124654 aggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcagggtttcccta 124713 Query: 285 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagggg 336 ||||||| |||||||| ||| |||| |||||||||||||| ||||||||||| Sbjct: 124714 tgaagcagggagtgctcactgctggacgtgtccgccttcttcttcacagggg 124765 Score = 103 bits (52), Expect = 6e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 102 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgacc 161 |||| |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||| Sbjct: 123491 agttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 123550 Query: 162 agaagctg 169 |||||||| Sbjct: 123551 agaagctg 123558
>gb|DQ191669.1| Solanum tuberosum ribosomal protein S6-like protein mRNA, complete cds Length = 1032 Score = 228 bits (115), Expect = 1e-56 Identities = 345/419 (82%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 98 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 157 |||||||| ||||| |||||||| || || ||||||||||||||| ||||||||||||| Sbjct: 52 atgaagttcaacattgcgaacccgactactgggtgccagaagaagctcgagatcgatgat 111 Query: 158 gaccagaagctgcggaacctt-tatgacaagagaatctcccaggaggtagttggtgatct 216 |||||||| || || | | || ||||||||||| |||||||||||||| || ||| Sbjct: 112 gaccagaaactccg-agctttctatgacaagaggatctcccaggaggttagcggagatgc 170 Query: 217 tctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcaggg 276 | |||| ||||| |||||||| || | |||||||| ||||| || ||||| ||||| || Sbjct: 171 tttgggagaggagttcaagggatacgttttcaagattatgggaggatgtgacaagcaagg 230 Query: 277 tttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagggg 336 |||||| |||||||| |||||| ||||| | || ||||| || ||||||||| |||| || Sbjct: 231 tttcccaatgaagcagggagtgttaactccaggccgtgttcgtcttctgctttacagagg 290 Query: 337 cacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccg 396 ||| ||||||||||||||| ||| ||||||||||||||||| || || ||||| ||||| Sbjct: 291 cactccttgcttccgtggtcatggtaggcgtaatggtgagcgaagaaggaagtctgtccg 350 Query: 397 tggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtga 456 ||| ||||| ||||| | ||||| || ||| | || ||||| ||||| ||||||||||| Sbjct: 351 tggatgcatcgtcagtcctgacctttcagttctgaatttggttattgtgaagaagggtga 410 Query: 457 gaatgatctaccaggccttactgacactgagaagcccaggatgaggggacccaagaggg 515 ||||||||| || || || || |||||||| || || |||||||| || ||||| |||| Sbjct: 411 gaatgatctgcccggactgacagacactgaaaaacctaggatgagaggtcccaaaaggg 469
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 222 bits (112), Expect = 9e-55 Identities = 157/172 (91%) Strand = Plus / Minus Query: 344 tgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgc 403 ||||||||||| | |||||||||| ||||||||||||| || ||||| |||||||||||| Sbjct: 15461353 tgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtccgtggttgc 15461294 Query: 404 attgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgat 463 |||||||||||||| || ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 15461293 attgtcagccaagatctctctgttatcaacttggtgattgtaaagaagggtgataatgac 15461234 Query: 464 ctaccaggccttactgacactgagaagcccaggatgaggggacccaagaggg 515 || || ||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 15461233 cttcctggcttgactgacactgagaagcccaggatgaggggacccaagaggg 15461182 Score = 119 bits (60), Expect = 9e-24 Identities = 99/112 (88%) Strand = Plus / Minus Query: 225 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccga 284 ||||||||||||| ||| | |||||||||||||| |||||||| ||||| |||||||| | Sbjct: 15461567 aggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttcccca 15461508 Query: 285 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagggg 336 ||||||| || ||||| |||||||| |||||||||||||| || |||||||| Sbjct: 15461507 tgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagggg 15461456 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 102 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgacc 161 |||| |||||||| ||||| ||||| ||||||||||||||| |||||||||||||||||| Sbjct: 15462534 agttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 15462475 Query: 162 agaagctg 169 |||||||| Sbjct: 15462474 agaagctg 15462467 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 177 tttatgacaagagaatctcccagga 201 ||||||||||||| ||||||||||| Sbjct: 15461701 tttatgacaagaggatctcccagga 15461677
>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete sequence Length = 164705 Score = 222 bits (112), Expect = 9e-55 Identities = 157/172 (91%) Strand = Plus / Plus Query: 344 tgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgc 403 ||||||||||| | |||||||||| ||||||||||||| || ||||| |||||||||||| Sbjct: 40173 tgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtccgtggttgc 40232 Query: 404 attgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgat 463 |||||||||||||| || ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 40233 attgtcagccaagatctctctgttatcaacttggtgattgtaaagaagggtgataatgac 40292 Query: 464 ctaccaggccttactgacactgagaagcccaggatgaggggacccaagaggg 515 || || ||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 40293 cttcctggcttgactgacactgagaagcccaggatgaggggacccaagaggg 40344 Score = 119 bits (60), Expect = 9e-24 Identities = 99/112 (88%) Strand = Plus / Plus Query: 225 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccga 284 ||||||||||||| ||| | |||||||||||||| |||||||| ||||| |||||||| | Sbjct: 39959 aggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttcccca 40018 Query: 285 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagggg 336 ||||||| || ||||| |||||||| |||||||||||||| || |||||||| Sbjct: 40019 tgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagggg 40070 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 102 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgacc 161 |||| |||||||| ||||| ||||| ||||||||||||||| |||||||||||||||||| Sbjct: 38992 agttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 39051 Query: 162 agaagctg 169 |||||||| Sbjct: 39052 agaagctg 39059 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 177 tttatgacaagagaatctcccagga 201 ||||||||||||| ||||||||||| Sbjct: 39825 tttatgacaagaggatctcccagga 39849
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 222 bits (112), Expect = 9e-55 Identities = 157/172 (91%) Strand = Plus / Minus Query: 344 tgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgc 403 ||||||||||| | |||||||||| ||||||||||||| || ||||| |||||||||||| Sbjct: 15455887 tgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtccgtggttgc 15455828 Query: 404 attgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgat 463 |||||||||||||| || ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 15455827 attgtcagccaagatctctctgttatcaacttggtgattgtaaagaagggtgataatgac 15455768 Query: 464 ctaccaggccttactgacactgagaagcccaggatgaggggacccaagaggg 515 || || ||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 15455767 cttcctggcttgactgacactgagaagcccaggatgaggggacccaagaggg 15455716 Score = 119 bits (60), Expect = 9e-24 Identities = 99/112 (88%) Strand = Plus / Minus Query: 225 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccga 284 ||||||||||||| ||| | |||||||||||||| |||||||| ||||| |||||||| | Sbjct: 15456101 aggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttcccca 15456042 Query: 285 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagggg 336 ||||||| || ||||| |||||||| |||||||||||||| || |||||||| Sbjct: 15456041 tgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagggg 15455990 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 102 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgacc 161 |||| |||||||| ||||| ||||| ||||||||||||||| |||||||||||||||||| Sbjct: 15457068 agttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 15457009 Query: 162 agaagctg 169 |||||||| Sbjct: 15457008 agaagctg 15457001 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 177 tttatgacaagagaatctcccagga 201 ||||||||||||| ||||||||||| Sbjct: 15456235 tttatgacaagaggatctcccagga 15456211
>gb|BT014365.1| Lycopersicon esculentum clone 133651F, mRNA sequence Length = 1065 Score = 212 bits (107), Expect = 8e-52 Identities = 343/419 (81%), Gaps = 2/419 (0%) Strand = Plus / Plus Query: 98 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 157 |||||||| ||||| |||||||| || || ||||||||||||||| ||||||||||||| Sbjct: 72 atgaagttcaacattgcgaacccgactactgggtgccagaagaagctcgagatcgatgat 131 Query: 158 gaccagaagctgcggaacctt-tatgacaagagaatctcccaggaggtagttggtgatct 216 |||||||| || || | | || | ||||||||| |||||||||||||| || ||| Sbjct: 132 gaccagaaactccg-agctttctttgacaagaggatctcccaggaggttagcggagatgc 190 Query: 217 tctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcaggg 276 | |||| ||||| |||||||| || | |||||||| ||||| || ||||| ||||| || Sbjct: 191 tttgggagaggagttcaagggatacgttttcaagattatgggaggatgtgacaagcaagg 250 Query: 277 tttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagggg 336 |||||| |||||||| |||||| ||||| | || ||||| || |||||||||||||| || Sbjct: 251 tttcccaatgaagcagggagtgttaactccaggccgtgttcgtcttctgcttcacagagg 310 Query: 337 cacaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccg 396 ||| |||||||||||||||| ||| |||||||||||||| | | || ||||| ||||| Sbjct: 311 cactccttgcttccgtggttatggtaggcgtaatggtgaaagacgaaggaagtctgtccg 370 Query: 397 tggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtga 456 ||| ||||||||||| | ||||| || ||| | || ||||| ||||| |||||||| || Sbjct: 371 tggatgcattgtcagtcctgacctttcagttctgaatttggttattgtgaagaagggaga 430 Query: 457 gaatgatctaccaggccttactgacactgagaagcccaggatgaggggacccaagaggg 515 ||||||||| || || || || |||||||| || || || ||||| |||||||| |||| Sbjct: 431 gaatgatcttcctggactgacagacactgaaaaacctagaatgagaggacccaaaaggg 489
>gb|AY453394.1| Glycine max ribosomal protein S6 (RPS6) mRNA, complete cds Length = 1020 Score = 206 bits (104), Expect = 5e-50 Identities = 329/404 (81%) Strand = Plus / Plus Query: 98 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 157 |||||||| ||||||||||| |||||||| || |||||||||||| |||||||||| ||| Sbjct: 63 atgaagttcaacatcgcgaatcccaccactggatgccagaagaagctcgagatcgacgac 122 Query: 158 gaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatctt 217 || | ||| ||||| ||| |||||||| ||||| |||||||| | || ||| Sbjct: 123 gatctgaaactgcgagcattttgggacaagaggatctcacaggaggtcatcggagatgca 182 Query: 218 ctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggt 277 || ||||||||||| ||||| ||| ||||||| || | || || ||||| || || || Sbjct: 183 ctcggtgaggaatttaagggctatgtcttcaaaattaccggaggttgtgacaaacaagga 242 Query: 278 ttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggc 337 || || |||||||| |||||||| ||| |||| ||||| | ||| ||||||||||||| Sbjct: 243 tttccaatgaagcagggagtgctgactcctggtcgtgttagacttttgcttcacagggga 302 Query: 338 acaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgt 397 || |||||||||||||| | ||| ||||||||||| ||||| ||||||||||| || ||| Sbjct: 303 actccttgcttccgtggatatggaaggcgtaatggagagcgtaggagaaagtctgttcgt 362 Query: 398 ggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgag 457 || ||||||||||||| |||||| |||||| | |||||| | ||||| ||||| |||||| Sbjct: 363 gggtgcattgtcagcccagacctctctgttttgaacttgataattgtgaagaaaggtgag 422 Query: 458 aatgatctaccaggccttactgacactgagaagcccaggatgag 501 |||||| ||||||| | ||||| ||||||||| |||||||| Sbjct: 423 aatgatttaccaggattgactgatgttgagaagccaaggatgag 466
>gb|BT014411.1| Lycopersicon esculentum clone 133718F, mRNA sequence Length = 1067 Score = 200 bits (101), Expect = 3e-48 Identities = 248/297 (83%) Strand = Plus / Plus Query: 219 tgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtt 278 |||||||||| ||||||||||| | |||||||| ||||| || ||||| ||||| || | Sbjct: 185 tgggtgaggagttcaagggttacgttttcaagataatgggaggatgtgacaagcaagggt 244 Query: 279 tcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggca 338 |||| ||||| || |||||| ||||| |||| ||||| |||||| |||| ||||| || | Sbjct: 245 tccctatgaaacagggagtgttaactcctggccgtgttcgccttttgctccacagaggta 304 Query: 339 caccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtg 398 | |||||||||||||||| ||| ||||| ||||| |||||||| || ||||| ||||||| Sbjct: 305 ctccttgcttccgtggttatggtaggcgaaatggagagcgcagaaggaagtctgtccgtg 364 Query: 399 gttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgaga 458 | ||||||||||||| || || |||||| | ||| |||| ||||| |||||||| |||| Sbjct: 365 gatgcattgtcagccctgatctttctgttttgaacctggttattgttaagaagggggaga 424 Query: 459 atgatctaccaggccttactgacactgagaagcccaggatgaggggacccaagaggg 515 ||||||| || || || || |||||||| ||||| |||||||| |||||||| |||| Sbjct: 425 atgatctgcctggactgaccgacactgaaaagccaaggatgagaggacccaaaaggg 481 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 98 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 157 |||||||| ||||| ||||| |||||||| ||||||||||| ||| | || |||||||| Sbjct: 64 atgaagttcaacattgcgaatcccaccactgggtgccagaaaaagcttgaaatcgatgat 123 Query: 158 gaccagaa 165 || ||||| Sbjct: 124 gatcagaa 131
>dbj|D78497.1| Brassica rapa mRNA for putative ribosomal protein, partial cds Length = 426 Score = 172 bits (87), Expect = 7e-40 Identities = 243/295 (82%) Strand = Plus / Plus Query: 219 tgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtt 278 |||| ||||| |||||||| || | ||||||||||||||||| ||||| ||||| |||| Sbjct: 71 tgggcgaggagttcaaggggtacgttttcaagatcatgggtgggtgtgacaagcaaggtt 130 Query: 279 tcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggca 338 |||| |||||||| ||||| ||||| |||| ||||| |||||| |||||||| | || | Sbjct: 131 tccctatgaagcagggagttttaactcctggccgtgttcgccttttgcttcaccgaggaa 190 Query: 339 caccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtg 398 | |||||||| | || ||| ||| | | ||| ||| | || |||||||| || |||| Sbjct: 191 ctccttgctttagaggacatgggaggaggactggagagaggagaagaaagtctgttcgtg 250 Query: 399 gttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgaga 458 ||||||||||||||||||| || |||||| ||||| | || ||||||||||||||||||| Sbjct: 251 gttgcattgtcagccaagatctctctgttctcaaccttgtcattgtcaagaagggtgaga 310 Query: 459 atgatctaccaggccttactgacactgagaagcccaggatgaggggacccaagag 513 | ||||| || || ||||| || || |||||||| |||||||||||||| ||||| Sbjct: 311 aggatcttcccgggcttaccgataccgagaagccaaggatgaggggacctaagag 365
>gb|DQ241846.1| Solanum tuberosum clone 186G09 unknown mRNA Length = 1056 Score = 168 bits (85), Expect = 1e-38 Identities = 244/297 (82%) Strand = Plus / Plus Query: 219 tgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtt 278 |||||||||| ||||| ||||| | |||||||| ||||| || ||||| ||||| || | Sbjct: 169 tgggtgaggagttcaaaggttacgttttcaagataatgggaggatgtgacaagcaagggt 228 Query: 279 tcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggca 338 |||| |||||||| |||||| ||||| |||| ||||| |||||| |||| |||| || | Sbjct: 229 tcccaatgaagcagggagtgttaactcctggccgtgttcgccttttgctctacagaggta 288 Query: 339 caccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtg 398 | ||||||||||||||| ||| ||||| ||||| |||||||| || ||||| ||||||| Sbjct: 289 ctccttgcttccgtggtcatggtaggcgaaatggagagcgcagaaggaagtctgtccgtg 348 Query: 399 gttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgaga 458 | ||||||||||||| || || |||||| | ||| |||| ||||| || ||||| |||| Sbjct: 349 gatgcattgtcagccctgatctttctgttttgaacctggttattgttaaaaagggggaga 408 Query: 459 atgatctaccaggccttactgacactgagaagcccaggatgaggggacccaagaggg 515 ||||||| || || || || ||||| || ||||| |||||||| |||||||| |||| Sbjct: 409 atgatctgcctggactcaccgacaccgaaaagccaaggatgagaggacccaaaaggg 465
>dbj|AP006076.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19M07, TM0114, complete sequence Length = 94533 Score = 165 bits (83), Expect = 2e-37 Identities = 152/175 (86%) Strand = Plus / Plus Query: 341 ccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggt 400 |||||||||||||| | ||| ||||||||||| ||||||||||||||||| || ||||| Sbjct: 18674 ccttgcttccgtggatatggaaggcgtaatggagagcgcaggagaaagtctgtacgtgga 18733 Query: 401 tgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaat 460 ||||||||||||| ||||| |||||| | |||||||||||||| ||||||||||| ||| Sbjct: 18734 tgcattgtcagccctgacctctctgttctgaacttggtgattgtgaagaagggtgacaat 18793 Query: 461 gatctaccaggccttactgacactgagaagcccaggatgaggggacccaagaggg 515 ||| |||| ||| | ||||| ||||||||| ||||||||||| |||||||||| Sbjct: 18794 gatttacctggcttgactgatgttgagaagccaaggatgaggggtcccaagaggg 18848 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 102 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgacc 161 |||| ||||||||||| || ||||| ||||||||||||||| |||| |||||||| |||| Sbjct: 17770 agttcaacatcgcgaatccaaccactgggtgccagaagaagctcgaaatcgatgatgacc 17829
>emb|AJ277533.1|AOF277533 Asparagus officinalis mRNA for S6 ribosomal protein (rps6 gene) Length = 959 Score = 155 bits (78), Expect = 2e-34 Identities = 333/418 (79%) Strand = Plus / Plus Query: 98 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 157 |||||||| || ||||| || |||||||| ||||||||||| ||| ||||||| || ||| Sbjct: 26 atgaagttcaatatcgccaatcccaccactgggtgccagaaaaagctcgagattgacgac 85 Query: 158 gaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatctt 217 ||||||||||| || ||||||| ||| | || || || || || ||||||| | Sbjct: 86 gaccagaagctccgtgcattttatgataagcgtatttcacaagaagtcagtggtgatgct 145 Query: 218 ctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggt 277 || || ||||| |||||||| ||| | ||||| |||||||| || ||||| ||||||||| Sbjct: 146 cttggcgaggagttcaagggatatgttttcaaaatcatgggaggttgtgacaagcagggt 205 Query: 278 ttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggc 337 || || |||||||| |||||||| ||| |||| || |||||||| |||| ||||| || Sbjct: 206 tttcccatgaagcagggagtgctgactcctggtcgcgtccgcctattgctgcacagagga 265 Query: 338 acaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgt 397 ||||||||||||||||||| ||| ||||| || || ||||| || || ||||| || ||| Sbjct: 266 acaccttgcttccgtggttatggaaggcgcaacggagagcgaagaaggaagtctgtgcgt 325 Query: 398 ggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgag 457 || |||||||| |||| || || ||||| |||| | || ||||| ||||| |||||| Sbjct: 326 gggtgcattgttagccctgatctctctgtcctcaatctcgttattgttaagaaaggtgag 385 Query: 458 aatgatctaccaggccttactgacactgagaagcccaggatgaggggacccaagaggg 515 ||||| || || || | ||||| ||||||||| |||||||| ||||| ||||||| Sbjct: 386 aatgaccttcctgggttgactgatgttgagaagccaaggatgagaggacctaagaggg 443
>gb|AY293401.1| Brassica napus ribosomal protein S6 (RPS6) mRNA, complete cds Length = 980 Score = 153 bits (77), Expect = 7e-34 Identities = 333/416 (80%), Gaps = 3/416 (0%) Strand = Plus / Plus Query: 98 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 157 |||||||| ||| |||| ||||| ||||| || |||||||||||| |||||||||| || Sbjct: 61 atgaagtttaacgtcgcaaacccaaccactggttgccagaagaagctcgagatcgacgat 120 Query: 158 gaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatctt 217 |||||||| || || ||||||| |||||| |||| || || || ||| ||| | Sbjct: 121 gaccagaaactccgtgcgttttatgataagagactctctcaagaagtcagtggagatgct 180 Query: 218 ctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggt 277 |||| ||||| |||||||| || || |||||||||||||| || ||||| ||||| || Sbjct: 181 ttgggcgaggagttcaagggatacattttcaagatcatgggagggtgtgacaagcaaggc 240 Query: 278 ttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggc 337 ||||| |||||||| ||||| ||||| | || ||||| |||||| |||||||| | || Sbjct: 241 ttcccaatgaagcagggagttttaactccaggccgtgttcgccttttgcttcaccgagga 300 Query: 338 acaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgt 397 || ||||||||| | || || ||| | | ||| ||| | || |||||||| || ||| Sbjct: 301 actccttgcttcagaggacacggaaggaggactggagagaggagaagaaagtctgttcgt 360 Query: 398 ggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgag 457 |||||||||||||||||||| || |||||| | ||| | || |||||||||||||||||| Sbjct: 361 ggttgcattgtcagccaagatctctctgttcttaaccttgtcattgtcaagaagggtgag 420 Query: 458 aatgatctaccaggccttactgacactgagaagcccaggatgaggggacccaagag 513 || ||||| || || ||||| ||||| || ||||| ||||||||||||||||||| Sbjct: 421 aaggatcttcccgggcttaccgacaccga-aagcc--ggatgaggggacccaagag 473
>emb|AJ010227.1|CAR010227 Cicer arietinum mRNA for 40S ribosomal protein S6, partial Length = 920 Score = 133 bits (67), Expect = 6e-28 Identities = 229/283 (80%) Strand = Plus / Plus Query: 219 tgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtt 278 |||| |||||||| || || ||| | |||||||||| ||||| ||||| || || || | Sbjct: 12 tgggcgaggaatttaaaggctatgttttcaagatcactggtgggtgtgacaaacaaggat 71 Query: 279 tcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggca 338 |||| |||||||| |||||||| || |||| ||||| || || ||||||| || || | Sbjct: 72 tcccaatgaagcagggagtgctgacacctggtcgtgttcgactcttgcttcatagaggaa 131 Query: 339 caccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtg 398 | ||||| |||||||| | ||| ||||| ||||| ||||| || |||||||| || |||| Sbjct: 132 ctccttgtttccgtggatatggaaggcgcaatggagagcgtagaagaaagtctgttcgtg 191 Query: 399 gttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgaga 458 | ||||||||||||| ||||| |||||| | |||||||| ||||| ||||| ||||| | Sbjct: 192 gatgcattgtcagccctgacctctctgttttgaacttggtaattgtgaagaaaggtgaaa 251 Query: 459 atgatctaccaggccttactgacactgagaagcccaggatgag 501 ||||| ||||||| |||||||| |||||| || |||||||| Sbjct: 252 atgatttaccaggtcttactgatgttgagaaaccaaggatgag 294
>gb|AC155341.1| Brassica rapa subsp. pekinensis chromosome 6 clone KBrH004D11, complete sequence Length = 106476 Score = 131 bits (66), Expect = 2e-27 Identities = 118/134 (88%), Gaps = 1/134 (0%) Strand = Plus / Minus Query: 380 aggagaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtg 439 ||||||||||| ||||| ||||||||||||||||||||||| |||||| | |||||||| Sbjct: 89689 aggagaaagtctgtccgcggttgcattgtcagccaagacctctctgttcttaacttggtt 89630 Query: 440 attgtcaagaagggtgagaatgatctaccaggccttactgacactgagaagcccaggatg 499 ||||||||||||||| |||| ||||| || || ||||| || || |||||||| |||||| Sbjct: 89629 attgtcaagaagggt-agaaggatcttcccgggcttaccgataccgagaagccgaggatg 89571 Query: 500 aggggacccaagag 513 |||||||| ||||| Sbjct: 89570 aggggacctaagag 89557 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 102 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgacc 161 |||| ||| ||||||| || ||||| || |||||||||||| |||||||||||||||||| Sbjct: 90228 agttcaacgtcgcgaatccgaccactggatgccagaagaagctcgagatcgatgacgacc 90169 Query: 162 agaagctg 169 | |||||| Sbjct: 90168 aaaagctg 90161 Score = 58.0 bits (29), Expect = 3e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 245 ttcaagatcatgggtggctgtgataagcagggtttcccgatgaagcaaggagtgctaact 304 |||||||||||||| || || || ||||| || ||||||||||| || ||||| || || Sbjct: 89824 ttcaagatcatgggaggatgcgacaagcaaggcttcccgatgaaacagggagttctcacc 89765 Query: 305 tctgggcgtgtccgccttctgcttcacaggggcacaccttgcttc 349 |||| |||||||| || |||||||| | ||||| ||||||||| Sbjct: 89764 cctggtcgtgtccgtctcttgcttcaccgaggcactccttgcttc 89720
>emb|X68050.1|NTRPS6 N.tabacum mRNA for ribosomal protein S6 Length = 804 Score = 121 bits (61), Expect = 2e-24 Identities = 223/277 (80%) Strand = Plus / Minus Query: 231 tcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccgatgaagc 290 |||| |||||| | |||||||| ||||| || ||||| |||||||| || || ||||||| Sbjct: 804 tcaaaggttatgtgttcaagattatgggaggatgtgacaagcaggggtttccaatgaagc 745 Query: 291 aaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacaccttgcttcc 350 | ||||| ||||| | || ||||| |||||| |||| || | ||||| ||||| |||| Sbjct: 744 agggagttttaactccaggccgtgttcgccttttgctgtaccgcggcactccttgtttcc 685 Query: 351 gtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgtggttgcattgtca 410 | || | ||| ||| | |||||||||||||| |||||||| |||||||| |||||||||| Sbjct: 684 gggggtatggtaggagaaatggtgagcgcagaagaaagtctgtccgtggatgcattgtca 625 Query: 411 gccaagacctgtctgttatcaacttggtgattgtcaagaagggtgagaatgatctaccag 470 ||| || || |||||| | || |||| || || || ||||||||||||||||| || | Sbjct: 624 gccctgatctttctgttctgaatctggttatcgtgaaaaagggtgagaatgatctgcctg 565 Query: 471 gccttactgacactgagaagcccaggatgaggggacc 507 | || || |||||||| || || |||||||| ||||| Sbjct: 564 gactgacagacactgaaaaaccaaggatgagaggacc 528
>ref|NM_119319.3| Arabidopsis thaliana RPS6 (RIBOSOMAL PROTEIN S6); structural constituent of ribosome AT4G31700 (RPS6) mRNA, complete cds Length = 993 Score = 119 bits (60), Expect = 9e-24 Identities = 327/416 (78%) Strand = Plus / Plus Query: 98 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 157 |||||||| ||| | ||||| || || || || |||||||||||| |||||||||| || Sbjct: 12 atgaagttcaacgttgcgaatccaactactggatgccagaagaagctcgagatcgacgat 71 Query: 158 gaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatctt 217 |||||||| || || |||| |||||||||||||| || || || ||| ||| | Sbjct: 72 gaccagaaactacgtgcgttttacgacaagagaatctctcaagaagtcagtggagatgct 131 Query: 218 ctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggt 277 |||| ||||| ||||| || || | |||||||||| |||||| || |||||||| ||| Sbjct: 132 ttgggcgaggagttcaaaggatacgttttcaagatcaagggtggttgcgataagcaaggt 191 Query: 278 ttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggc 337 ||||| |||||||| ||||| | ||| | || ||||| |||||| |||||||| | || Sbjct: 192 ttcccaatgaagcagggagttttgactccaggccgtgttcgccttttgcttcaccgagga 251 Query: 338 acaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgt 397 || ||||||||| | || ||| ||| | | ||||||| | || |||||||| || ||| Sbjct: 252 actccttgcttcagaggacatggaaggagaactggtgagaggagaagaaagtctgttcgt 311 Query: 398 ggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgag 457 ||||||||||| |||| || || |||||| | ||| | || ||||| |||||||||||| Sbjct: 312 ggttgcattgtgagccctgatctctctgttctgaaccttgtcattgtgaagaagggtgag 371 Query: 458 aatgatctaccaggccttactgacactgagaagcccaggatgaggggacccaagag 513 || ||||| || || ||||| || ||||||||||| || ||||| ||||| ||||| Sbjct: 372 aacgatcttcctgggcttaccgatactgagaagccaagaatgagaggaccaaagag 427
>gb|BT000693.1| Arabidopsis thaliana clone RAFL07-09-P18 (R10989) putative ribosomal protein S6 (At4g31700) mRNA, complete cds Length = 962 Score = 119 bits (60), Expect = 9e-24 Identities = 327/416 (78%) Strand = Plus / Plus Query: 98 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 157 |||||||| ||| | ||||| || || || || |||||||||||| |||||||||| || Sbjct: 14 atgaagttcaacgttgcgaatccaactactggatgccagaagaagctcgagatcgacgat 73 Query: 158 gaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatctt 217 |||||||| || || |||| |||||||||||||| || || || ||| ||| | Sbjct: 74 gaccagaaactacgtgcgttttacgacaagagaatctctcaagaagtcagtggagatgct 133 Query: 218 ctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggt 277 |||| ||||| ||||| || || | |||||||||| |||||| || |||||||| ||| Sbjct: 134 ttgggcgaggagttcaaaggatacgttttcaagatcaagggtggttgcgataagcaaggt 193 Query: 278 ttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggc 337 ||||| |||||||| ||||| | ||| | || ||||| |||||| |||||||| | || Sbjct: 194 ttcccaatgaagcagggagttttgactccaggccgtgttcgccttttgcttcaccgagga 253 Query: 338 acaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgt 397 || ||||||||| | || ||| ||| | | ||||||| | || |||||||| || ||| Sbjct: 254 actccttgcttcagaggacatggaaggagaactggtgagaggagaagaaagtctgttcgt 313 Query: 398 ggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgag 457 ||||||||||| |||| || || |||||| | ||| | || ||||| |||||||||||| Sbjct: 314 ggttgcattgtgagccctgatctctctgttctgaaccttgtcattgtgaagaagggtgag 373 Query: 458 aatgatctaccaggccttactgacactgagaagcccaggatgaggggacccaagag 513 || ||||| || || ||||| || ||||||||||| || ||||| ||||| ||||| Sbjct: 374 aacgatcttcctgggcttaccgatactgagaagccaagaatgagaggaccaaagag 429
>gb|AY113983.1| Arabidopsis thaliana putative ribosomal protein S6 (At4g31700) mRNA, complete cds Length = 784 Score = 119 bits (60), Expect = 9e-24 Identities = 327/416 (78%) Strand = Plus / Plus Query: 98 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 157 |||||||| ||| | ||||| || || || || |||||||||||| |||||||||| || Sbjct: 1 atgaagttcaacgttgcgaatccaactactggatgccagaagaagctcgagatcgacgat 60 Query: 158 gaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatctt 217 |||||||| || || |||| |||||||||||||| || || || ||| ||| | Sbjct: 61 gaccagaaactacgtgcgttttacgacaagagaatctctcaagaagtcagtggagatgct 120 Query: 218 ctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggt 277 |||| ||||| ||||| || || | |||||||||| |||||| || |||||||| ||| Sbjct: 121 ttgggcgaggagttcaaaggatacgttttcaagatcaagggtggttgcgataagcaaggt 180 Query: 278 ttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggc 337 ||||| |||||||| ||||| | ||| | || ||||| |||||| |||||||| | || Sbjct: 181 ttcccaatgaagcagggagttttgactccaggccgtgttcgccttttgcttcaccgagga 240 Query: 338 acaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgt 397 || ||||||||| | || ||| ||| | | ||||||| | || |||||||| || ||| Sbjct: 241 actccttgcttcagaggacatggaaggagaactggtgagaggagaagaaagtctgttcgt 300 Query: 398 ggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgag 457 ||||||||||| |||| || || |||||| | ||| | || ||||| |||||||||||| Sbjct: 301 ggttgcattgtgagccctgatctctctgttctgaaccttgtcattgtgaagaagggtgag 360 Query: 458 aatgatctaccaggccttactgacactgagaagcccaggatgaggggacccaagag 513 || ||||| || || ||||| || ||||||||||| || ||||| ||||| ||||| Sbjct: 361 aacgatcttcctgggcttaccgatactgagaagccaagaatgagaggaccaaagag 416
>gb|AY050803.1| Arabidopsis thaliana putative ribosomal protein S6 (At4g31700) mRNA, complete cds Length = 989 Score = 119 bits (60), Expect = 9e-24 Identities = 327/416 (78%) Strand = Plus / Plus Query: 98 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 157 |||||||| ||| | ||||| || || || || |||||||||||| |||||||||| || Sbjct: 8 atgaagttcaacgttgcgaatccaactactggatgccagaagaagctcgagatcgacgat 67 Query: 158 gaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatctt 217 |||||||| || || |||| |||||||||||||| || || || ||| ||| | Sbjct: 68 gaccagaaactacgtgcgttttacgacaagagaatctctcaagaagtcagtggagatgct 127 Query: 218 ctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggt 277 |||| ||||| ||||| || || | |||||||||| |||||| || |||||||| ||| Sbjct: 128 ttgggcgaggagttcaaaggatacgttttcaagatcaagggtggttgcgataagcaaggt 187 Query: 278 ttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggc 337 ||||| |||||||| ||||| | ||| | || ||||| |||||| |||||||| | || Sbjct: 188 ttcccaatgaagcagggagttttgactccaggccgtgttcgccttttgcttcaccgagga 247 Query: 338 acaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgt 397 || ||||||||| | || ||| ||| | | ||||||| | || |||||||| || ||| Sbjct: 248 actccttgcttcagaggacatggaaggagaactggtgagaggagaagaaagtctgttcgt 307 Query: 398 ggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgag 457 ||||||||||| |||| || || |||||| | ||| | || ||||| |||||||||||| Sbjct: 308 ggttgcattgtgagccctgatctctctgttctgaaccttgtcattgtgaagaagggtgag 367 Query: 458 aatgatctaccaggccttactgacactgagaagcccaggatgaggggacccaagag 513 || ||||| || || ||||| || ||||||||||| || ||||| ||||| ||||| Sbjct: 368 aacgatcttcctgggcttaccgatactgagaagccaagaatgagaggaccaaagag 423
>emb|BX826399.1|CNS0A4KZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB21ZD05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 938 Score = 117 bits (59), Expect = 4e-23 Identities = 302/383 (78%) Strand = Plus / Plus Query: 131 tgccagaagaaggtcgagatcgatgacgaccagaagctgcggaacctttatgacaagaga 190 |||||||||||| |||||||||| || |||||||| || || |||| ||||||||| Sbjct: 30 tgccagaagaagctcgagatcgacgatgaccagaaactacgtgcgttttacgacaagaga 89 Query: 191 atctcccaggaggtagttggtgatcttctgggtgaggaattcaagggttatatcttcaag 250 ||||| || || || ||| ||| | |||| ||||| ||||| || || | |||||| Sbjct: 90 atctctcaagaagtcagtggagatgctttgggcgaggagttcaaaggatacgttttcaag 149 Query: 251 atcatgggtggctgtgataagcagggtttcccgatgaagcaaggagtgctaacttctggg 310 |||| |||||| || |||||||| |||||||| |||||||| ||||| | ||| | || Sbjct: 150 atcaagggtggttgcgataagcaaggtttcccaatgaagcagggagttttgactccaggc 209 Query: 311 cgtgtccgccttctgcttcacaggggcacaccttgcttccgtggttttggcaggcgtaat 370 ||||| |||||| |||||||| | || || ||||||||| | || ||| ||| | | | Sbjct: 210 cgtgttcgccttttgcttcaccgaggaactccttgcttcagaggacatggaaggagaact 269 Query: 371 ggtgagcgcaggagaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatc 430 |||||| | || |||||||| || |||||||||||||| |||| || || |||||| | Sbjct: 270 ggtgagaggagaagaaagtctgttcgtggttgcattgtgagccctgatctctctgttctg 329 Query: 431 aacttggtgattgtcaagaagggtgagaatgatctaccaggccttactgacactgagaag 490 ||| | || ||||| |||||||||||||| ||||| || || ||||| || ||||||||| Sbjct: 330 aaccttgtcattgtgaagaagggtgagaacgatcttcctgggcttaccgatactgagaag 389 Query: 491 cccaggatgaggggacccaagag 513 || || ||||| ||||| ||||| Sbjct: 390 ccaagaatgagaggaccaaagag 412
>ref|NM_121074.2| Arabidopsis thaliana EMB3010; structural constituent of ribosome AT5G10360 (EMB3010) mRNA, complete cds Length = 1095 Score = 111 bits (56), Expect = 2e-21 Identities = 113/132 (85%) Strand = Plus / Plus Query: 384 gaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattg 443 ||||||| ||||||||||||||||| |||| |||||||||||| | |||||||| |||| Sbjct: 372 gaaagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattg 431 Query: 444 tcaagaagggtgagaatgatctaccaggccttactgacactgagaagcccaggatgaggg 503 | |||||||||| | |||||| || || ||||| |||||||||||||| || ||||| | Sbjct: 432 tgaagaagggtgtaagtgatcttcccgggcttaccgacactgagaagccaagaatgagag 491 Query: 504 gacccaagaggg 515 | |||||||||| Sbjct: 492 gtcccaagaggg 503 Score = 87.7 bits (44), Expect = 3e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 224 gaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccg 283 |||||||||||||| || | |||||||||||||| || ||||| ||||| |||||||| Sbjct: 212 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 271 Query: 284 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 331 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 272 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 319 Score = 44.1 bits (22), Expect = 0.45 Identities = 52/62 (83%) Strand = Plus / Plus Query: 98 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 157 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 86 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 145 Query: 158 ga 159 || Sbjct: 146 ga 147
>emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, BAC clone F12B17 (ESSA project) Length = 113053 Score = 111 bits (56), Expect = 2e-21 Identities = 113/132 (85%) Strand = Plus / Plus Query: 384 gaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattg 443 ||||||| ||||||||||||||||| |||| |||||||||||| | |||||||| |||| Sbjct: 105577 gaaagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattg 105636 Query: 444 tcaagaagggtgagaatgatctaccaggccttactgacactgagaagcccaggatgaggg 503 | |||||||||| | |||||| || || ||||| |||||||||||||| || ||||| | Sbjct: 105637 tgaagaagggtgtaagtgatcttcccgggcttaccgacactgagaagccaagaatgagag 105696 Query: 504 gacccaagaggg 515 | |||||||||| Sbjct: 105697 gtcccaagaggg 105708 Score = 85.7 bits (43), Expect = 1e-13 Identities = 91/107 (85%) Strand = Plus / Plus Query: 225 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccga 284 ||||||||||||| || | |||||||||||||| || ||||| ||||| |||||||| | Sbjct: 105321 aggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttcccaa 105380 Query: 285 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 331 |||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 105381 tgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 105427
>gb|AY093783.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds Length = 750 Score = 111 bits (56), Expect = 2e-21 Identities = 113/132 (85%) Strand = Plus / Plus Query: 384 gaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattg 443 ||||||| ||||||||||||||||| |||| |||||||||||| | |||||||| |||| Sbjct: 287 gaaagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattg 346 Query: 444 tcaagaagggtgagaatgatctaccaggccttactgacactgagaagcccaggatgaggg 503 | |||||||||| | |||||| || || ||||| |||||||||||||| || ||||| | Sbjct: 347 tgaagaagggtgtaagtgatcttcccgggcttaccgacactgagaagccaagaatgagag 406 Query: 504 gacccaagaggg 515 | |||||||||| Sbjct: 407 gtcccaagaggg 418 Score = 87.7 bits (44), Expect = 3e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 224 gaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccg 283 |||||||||||||| || | |||||||||||||| || ||||| ||||| |||||||| Sbjct: 127 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 186 Query: 284 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 331 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 187 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 234 Score = 44.1 bits (22), Expect = 0.45 Identities = 52/62 (83%) Strand = Plus / Plus Query: 98 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 157 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 1 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 60 Query: 158 ga 159 || Sbjct: 61 ga 62
>gb|AY057634.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds Length = 993 Score = 111 bits (56), Expect = 2e-21 Identities = 113/132 (85%) Strand = Plus / Plus Query: 384 gaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattg 443 ||||||| ||||||||||||||||| |||| |||||||||||| | |||||||| |||| Sbjct: 372 gaaagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattg 431 Query: 444 tcaagaagggtgagaatgatctaccaggccttactgacactgagaagcccaggatgaggg 503 | |||||||||| | |||||| || || ||||| |||||||||||||| || ||||| | Sbjct: 432 tgaagaagggtgtaagtgatcttcccgggcttaccgacactgagaagccaagaatgagag 491 Query: 504 gacccaagaggg 515 | |||||||||| Sbjct: 492 gtcccaagaggg 503 Score = 87.7 bits (44), Expect = 3e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 224 gaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccg 283 |||||||||||||| || | |||||||||||||| || ||||| ||||| |||||||| Sbjct: 212 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 271 Query: 284 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 331 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 272 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 319 Score = 44.1 bits (22), Expect = 0.45 Identities = 52/62 (83%) Strand = Plus / Plus Query: 98 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 157 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 86 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 145 Query: 158 ga 159 || Sbjct: 146 ga 147
>gb|AY045594.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds Length = 993 Score = 111 bits (56), Expect = 2e-21 Identities = 113/132 (85%) Strand = Plus / Plus Query: 384 gaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattg 443 ||||||| ||||||||||||||||| |||| |||||||||||| | |||||||| |||| Sbjct: 372 gaaagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattg 431 Query: 444 tcaagaagggtgagaatgatctaccaggccttactgacactgagaagcccaggatgaggg 503 | |||||||||| | |||||| || || ||||| |||||||||||||| || ||||| | Sbjct: 432 tgaagaagggtgtaagtgatcttcccgggcttaccgacactgagaagccaagaatgagag 491 Query: 504 gacccaagaggg 515 | |||||||||| Sbjct: 492 gtcccaagaggg 503 Score = 87.7 bits (44), Expect = 3e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 224 gaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccg 283 |||||||||||||| || | |||||||||||||| || ||||| ||||| |||||||| Sbjct: 212 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 271 Query: 284 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 331 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 272 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 319 Score = 44.1 bits (22), Expect = 0.45 Identities = 52/62 (83%) Strand = Plus / Plus Query: 98 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 157 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 86 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 145 Query: 158 ga 159 || Sbjct: 146 ga 147
>emb|BX832002.1|CNS0A26R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH45ZC11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 969 Score = 111 bits (56), Expect = 2e-21 Identities = 113/132 (85%) Strand = Plus / Plus Query: 384 gaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattg 443 ||||||| ||||||||||||||||| |||| |||||||||||| | |||||||| |||| Sbjct: 355 gaaagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattg 414 Query: 444 tcaagaagggtgagaatgatctaccaggccttactgacactgagaagcccaggatgaggg 503 | |||||||||| | |||||| || || ||||| |||||||||||||| || ||||| | Sbjct: 415 tgaagaagggtgtaagtgatcttcccgggcttaccgacactgagaagccaagaatgagag 474 Query: 504 gacccaagaggg 515 | |||||||||| Sbjct: 475 gtcccaagaggg 486 Score = 87.7 bits (44), Expect = 3e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 224 gaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccg 283 |||||||||||||| || | |||||||||||||| || ||||| ||||| |||||||| Sbjct: 195 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 254 Query: 284 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 331 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 255 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 302 Score = 44.1 bits (22), Expect = 0.45 Identities = 52/62 (83%) Strand = Plus / Plus Query: 98 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 157 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 69 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 128 Query: 158 ga 159 || Sbjct: 129 ga 130
>emb|BX829995.1|CNS0A1FC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB52ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 981 Score = 111 bits (56), Expect = 2e-21 Identities = 113/132 (85%) Strand = Plus / Plus Query: 384 gaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattg 443 ||||||| ||||||||||||||||| |||| |||||||||||| | |||||||| |||| Sbjct: 353 gaaagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattg 412 Query: 444 tcaagaagggtgagaatgatctaccaggccttactgacactgagaagcccaggatgaggg 503 | |||||||||| | |||||| || || ||||| |||||||||||||| || ||||| | Sbjct: 413 tgaagaagggtgtaagtgatcttcccgggcttaccgacactgagaagccaagaatgagag 472 Query: 504 gacccaagaggg 515 | |||||||||| Sbjct: 473 gtcccaagaggg 484 Score = 79.8 bits (40), Expect = 8e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 224 gaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccg 283 |||||||||||||| || | |||||||||||||| || ||| | ||||| |||||||| Sbjct: 193 gaggaattcaagggatacgtattcaagatcatgggaggatgttacaagcaaggtttccca 252 Query: 284 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 331 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 253 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 300 Score = 44.1 bits (22), Expect = 0.45 Identities = 52/62 (83%) Strand = Plus / Plus Query: 98 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 157 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 67 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 126 Query: 158 ga 159 || Sbjct: 127 ga 128
>emb|BX830696.1|CNS0A0OB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS15ZE05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 947 Score = 111 bits (56), Expect = 2e-21 Identities = 113/132 (85%) Strand = Plus / Plus Query: 384 gaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattg 443 ||||||| ||||||||||||||||| |||| |||||||||||| | |||||||| |||| Sbjct: 353 gaaagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattg 412 Query: 444 tcaagaagggtgagaatgatctaccaggccttactgacactgagaagcccaggatgaggg 503 | |||||||||| | |||||| || || ||||| |||||||||||||| || ||||| | Sbjct: 413 tgaagaagggtgtaagtgatcttcccgggcttaccgacactgagaagccaagaatgagag 472 Query: 504 gacccaagaggg 515 | |||||||||| Sbjct: 473 gtcccaagaggg 484 Score = 87.7 bits (44), Expect = 3e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 224 gaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccg 283 |||||||||||||| || | |||||||||||||| || ||||| ||||| |||||||| Sbjct: 193 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 252 Query: 284 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 331 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 253 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 300 Score = 44.1 bits (22), Expect = 0.45 Identities = 52/62 (83%) Strand = Plus / Plus Query: 98 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 157 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 67 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 126 Query: 158 ga 159 || Sbjct: 127 ga 128
>emb|Y14052.1|ATY14052 Arabidopsis thaliana mRNA for ribosomal protein S6 Length = 957 Score = 111 bits (56), Expect = 2e-21 Identities = 113/132 (85%) Strand = Plus / Plus Query: 384 gaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattg 443 ||||||| ||||||||||||||||| |||| |||||||||||| | |||||||| |||| Sbjct: 287 gaaagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattg 346 Query: 444 tcaagaagggtgagaatgatctaccaggccttactgacactgagaagcccaggatgaggg 503 | |||||||||| | |||||| || || ||||| |||||||||||||| || ||||| | Sbjct: 347 tgaagaagggtgtaagtgatcttcccgggcttaccgacactgagaagccaagaatgagag 406 Query: 504 gacccaagaggg 515 | |||||||||| Sbjct: 407 gtcccaagaggg 418 Score = 87.7 bits (44), Expect = 3e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 224 gaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccg 283 |||||||||||||| || | |||||||||||||| || ||||| ||||| |||||||| Sbjct: 127 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 186 Query: 284 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 331 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 187 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 234 Score = 44.1 bits (22), Expect = 0.45 Identities = 52/62 (83%) Strand = Plus / Plus Query: 98 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 157 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 1 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 60 Query: 158 ga 159 || Sbjct: 61 ga 62
>emb|BX832457.1|CNS0A241 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZH01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 689 Score = 103 bits (52), Expect = 6e-19 Identities = 112/132 (84%) Strand = Plus / Plus Query: 384 gaaagtccgtccgtggttgcattgtcagccaagacctgtctgttatcaacttggtgattg 443 ||||||| ||||||||||||||||| |||| |||||||||||| | |||||||| |||| Sbjct: 33 gaaagtctgtccgtggttgcattgtgagccctgacctgtctgttcttaacttggtcattg 92 Query: 444 tcaagaagggtgagaatgatctaccaggccttactgacactgagaagcccaggatgaggg 503 | |||||||||| | | |||| || || ||||| |||||||||||||| || ||||| | Sbjct: 93 tgaagaagggtgtaagttatcttcccgggcttaccgacactgagaagccaagaatgagag 152 Query: 504 gacccaagaggg 515 | |||||||||| Sbjct: 153 gtcccaagaggg 164
>gb|AC146855.5| Medicago truncatula clone mth2-16c23, complete sequence Length = 137979 Score = 99.6 bits (50), Expect = 9e-18 Identities = 128/154 (83%) Strand = Plus / Minus Query: 362 aggcgtaatggtgagcgcaggagaaagtccgtccgtggttgcattgtcagccaagacctg 421 ||||||||||| ||||| || || ||||| || ||||| ||||||||||||| |||||| Sbjct: 135731 aggcgtaatggagagcgaagaaggaagtctgttcgtgggtgcattgtcagcccagacctc 135672 Query: 422 tctgttatcaacttggtgattgtcaagaagggtgagaatgatctaccaggccttactgac 481 |||||| | |||||||| ||||| ||||||||||| |||||| | ||||| | ||||| Sbjct: 135671 tctgttctgaacttggttattgtgaagaagggtgaaaatgatttgccaggtttgactgat 135612 Query: 482 actgagaagcccaggatgaggggacccaagaggg 515 ||| |||||||| |||||||| || ||||||| Sbjct: 135611 gttgaaaagcccagaatgaggggtcctaagaggg 135578
>gb|AC149801.3| Medicago truncatula chromosome 2 BAC clone mth2-32i15, complete sequence Length = 96221 Score = 99.6 bits (50), Expect = 9e-18 Identities = 128/154 (83%) Strand = Plus / Plus Query: 362 aggcgtaatggtgagcgcaggagaaagtccgtccgtggttgcattgtcagccaagacctg 421 ||||||||||| ||||| || || ||||| || ||||| ||||||||||||| |||||| Sbjct: 93822 aggcgtaatggagagcgaagaaggaagtctgttcgtgggtgcattgtcagcccagacctc 93881 Query: 422 tctgttatcaacttggtgattgtcaagaagggtgagaatgatctaccaggccttactgac 481 |||||| | |||||||| ||||| ||||||||||| |||||| | ||||| | ||||| Sbjct: 93882 tctgttctgaacttggttattgtgaagaagggtgaaaatgatttgccaggtttgactgat 93941 Query: 482 actgagaagcccaggatgaggggacccaagaggg 515 ||| |||||||| |||||||| || ||||||| Sbjct: 93942 gttgaaaagcccagaatgaggggtcctaagaggg 93975
>gb|AF034217.1|AF034217 Arabidopsis thaliana ribosomal protein S6 (rps6) mRNA, complete cds Length = 945 Score = 95.6 bits (48), Expect = 1e-16 Identities = 288/368 (78%) Strand = Plus / Plus Query: 98 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 157 |||||||| ||| | ||||| || || || || |||||||||||| |||||||||| || Sbjct: 4 atgaagttcaacgttgcgaatccaactactggatgccagaagaagctcgagatcgacgat 63 Query: 158 gaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatctt 217 |||||||| || || |||| |||||||||||||| || || || ||| ||| | Sbjct: 64 gaccagaaactacgtgcgttttacgacaagagaatctctcaagaagtcagtggagatgct 123 Query: 218 ctgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggt 277 |||| ||||| ||||| || || | |||||||||| |||||| || |||||||| ||| Sbjct: 124 ttgggcgaggagttcaaaggatacgttttcaagatcaagggtggttgcgataagcaaggt 183 Query: 278 ttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggc 337 ||||| |||||||| ||||| | ||| | || ||||| |||||| |||||||| | || Sbjct: 184 ttcccaatgaagcagggagttttgactccaggccgtgttcgccttttgcttcaccgagga 243 Query: 338 acaccttgcttccgtggttttggcaggcgtaatggtgagcgcaggagaaagtccgtccgt 397 || ||||||||| | || ||| ||| | | ||||||| | || |||||||| || ||| Sbjct: 244 actccttgcttcagaggacatggaaggagaactggtgagaggagaagaaagtctgttcgt 303 Query: 398 ggttgcattgtcagccaagacctgtctgttatcaacttggtgattgtcaagaagggtgag 457 ||||||||||| |||| || || |||||| | ||| | || ||||| |||||||||||| Sbjct: 304 ggttgcattgtgagccctgatctctctgttctgaaccttgtcattgtgaagaagggtgag 363 Query: 458 aatgatct 465 || ||||| Sbjct: 364 aacgatct 371
>dbj|AK109085.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-H09, full insert sequence Length = 1049 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 96 ccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatg 155 |||||||| | ||||| || |||||||||||||| ||||||||||| ||||||| |||| Sbjct: 61 ccatgaagctcaacattgcctaccccaccacggggcgccagaagaagctcgagattgatg 120 Query: 156 acgaccagaagctgcg 171 |||||||||||||||| Sbjct: 121 acgaccagaagctgcg 136 Score = 48.1 bits (24), Expect = 0.029 Identities = 66/80 (82%) Strand = Plus / Plus Query: 221 ggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttc 280 ||||| || |||||||| || |||||||||||||||| || || |||||||||||| Sbjct: 186 ggtgacgagttcaagggctacgtcttcaagatcatgggaggacaggacaagcagggtttc 245 Query: 281 ccgatgaagcaaggagtgct 300 || |||||||| || ||||| Sbjct: 246 cccatgaagcagggtgtgct 265
>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75 Length = 196242 Score = 79.8 bits (40), Expect = 8e-12 Identities = 118/144 (81%) Strand = Plus / Minus Query: 370 tggtgagcgcaggagaaagtccgtccgtggttgcattgtcagccaagacctgtctgttat 429 ||||||| | || |||||||| || |||||||||||||| |||| || || |||||| | Sbjct: 112824 tggtgagaggagaagaaagtctgttcgtggttgcattgtgagccctgatctctctgttct 112765 Query: 430 caacttggtgattgtcaagaagggtgagaatgatctaccaggccttactgacactgagaa 489 ||| | || ||||| |||||||||||||| ||||| || || ||||| || |||||||| Sbjct: 112764 gaaccttgtcattgtgaagaagggtgagaacgatcttcctgggcttaccgatactgagaa 112705 Query: 490 gcccaggatgaggggacccaagag 513 ||| || ||||| ||||| ||||| Sbjct: 112704 gccaagaatgagaggaccaaagag 112681 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 131 tgccagaagaaggtcgagatcgatgacgaccagaa 165 |||||||||||| |||||||||| || |||||||| Sbjct: 113539 tgccagaagaagctcgagatcgacgatgaccagaa 113505
>emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome 4, BAC clone F28M20 (ESSAII project) Length = 90902 Score = 79.8 bits (40), Expect = 8e-12 Identities = 118/144 (81%) Strand = Plus / Plus Query: 370 tggtgagcgcaggagaaagtccgtccgtggttgcattgtcagccaagacctgtctgttat 429 ||||||| | || |||||||| || |||||||||||||| |||| || || |||||| | Sbjct: 40447 tggtgagaggagaagaaagtctgttcgtggttgcattgtgagccctgatctctctgttct 40506 Query: 430 caacttggtgattgtcaagaagggtgagaatgatctaccaggccttactgacactgagaa 489 ||| | || ||||| |||||||||||||| ||||| || || ||||| || |||||||| Sbjct: 40507 gaaccttgtcattgtgaagaagggtgagaacgatcttcctgggcttaccgatactgagaa 40566 Query: 490 gcccaggatgaggggacccaagag 513 ||| || ||||| ||||| ||||| Sbjct: 40567 gccaagaatgagaggaccaaagag 40590 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 131 tgccagaagaaggtcgagatcgatgacgaccagaa 165 |||||||||||| |||||||||| || |||||||| Sbjct: 39732 tgccagaagaagctcgagatcgacgatgaccagaa 39766
>emb|BX832475.1|CNS0A24D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH75ZG03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 645 Score = 58.0 bits (29), Expect = 3e-05 Identities = 72/85 (84%), Gaps = 1/85 (1%) Strand = Plus / Plus Query: 431 aacttggtgattgtcaagaagggtgagaatgatctaccaggccttactgacactgagaag 490 |||||||| ||||| |||||||||| | |||||| || ||| |||| |||||||||||| Sbjct: 71 aacttggtcattgtgaagaagggtgtaagtgatctgccgggc-ttaccgacactgagaag 129 Query: 491 cccaggatgaggggacccaagaggg 515 || || ||||| || |||||||||| Sbjct: 130 ccaagaatgagaggtcccaagaggg 154
>ref|XM_329546.1| Neurospora crassa OR74A hypothetical protein (NCU08502.1) partial mRNA Length = 720 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 371 ggtgagcgcaggagaaagtccgtccgtggttgcat 405 |||||||||| ||||||||||||||| |||||||| Sbjct: 268 ggtgagcgcaagagaaagtccgtccgcggttgcat 302
>ref|XM_958338.1| Neurospora crassa OR74A hypothetical protein (NCU08502.1) partial mRNA Length = 720 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 371 ggtgagcgcaggagaaagtccgtccgtggttgcat 405 |||||||||| ||||||||||||||| |||||||| Sbjct: 268 ggtgagcgcaagagaaagtccgtccgcggttgcat 302
>emb|BX842594.1| Neurospora crassa DNA linkage group II BAC clone B18P7 Length = 95637 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 371 ggtgagcgcaggagaaagtccgtccgtggttgcat 405 |||||||||| ||||||||||||||| |||||||| Sbjct: 44726 ggtgagcgcaagagaaagtccgtccgcggttgcat 44692
>ref|XM_447041.1| Candida glabrata CBS138, CAGL0H05643g partial mRNA Length = 711 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 221 ggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttc 280 ||||| |||||||||||||| | ||||||||||| ||||| || ||||| |||||| Sbjct: 124 ggtgatgaattcaagggttacaccttcaagatcaccggtggtaacgacaagcaaggtttc 183 Query: 281 ccgatgaagcaagg 294 || ||||||||||| Sbjct: 184 ccaatgaagcaagg 197
>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence Length = 1050361 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 221 ggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttc 280 ||||| |||||||||||||| | ||||||||||| ||||| || ||||| |||||| Sbjct: 560268 ggtgatgaattcaagggttacaccttcaagatcaccggtggtaacgacaagcaaggtttc 560327 Query: 281 ccgatgaagcaagg 294 || ||||||||||| Sbjct: 560328 ccaatgaagcaagg 560341
>ref|XM_360693.1| Magnaporthe grisea 70-15 hypothetical protein (MG03236.4) partial mRNA Length = 720 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 370 tggtgagcgcaggagaaagtccgtccgtggttg 402 ||||||||||| ||||||||||||||| ||||| Sbjct: 267 tggtgagcgcaagagaaagtccgtccgcggttg 299
>ref|XM_660817.1| Cryptosporidium hominis TU502 ribosomal protein S6e (Chro.20458) partial mRNA Length = 666 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 219 tgggtgaggaattcaagggttatat 243 ||||||||||||||||||||||||| Sbjct: 122 tgggtgaggaattcaagggttatat 146
>ref|XM_626605.1| Cryptosporidium parvum Iowa II 40S ribosomal protein S6 (cgd2_4260), partial mRNA Length = 678 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 219 tgggtgaggaattcaagggttatat 243 ||||||||||||||||||||||||| Sbjct: 134 tgggtgaggaattcaagggttatat 158
>gb|BC075953.1| Danio rerio zgc:92237, mRNA (cDNA clone MGC:92237 IMAGE:7052569), complete cds Length = 842 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 424 tgttatcaacttggtgattgtcaagaagggtgagaa 459 |||| |||||||||| ||||||| |||||||||||| Sbjct: 345 tgttctcaacttggtcattgtcaggaagggtgagaa 380
>ref|XM_746654.1| Aspergillus fumigatus Af293 40S ribosomal protein S6 (Afu4g10800) partial mRNA Length = 714 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 221 ggtgaggaattcaagggttatatcttcaagat 252 ||||| |||||||||||||| ||||||||||| Sbjct: 124 ggtgatgaattcaagggttacatcttcaagat 155
>ref|XM_380810.1| Gibberella zeae PH-1 chromosome 1 conserved hypothetical protein (FG00634.1) partial mRNA Length = 714 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 370 tggtgagcgcaggagaaagtccgtccgtggttgcat 405 ||||||||||| ||||||||| |||||||| ||||| Sbjct: 261 tggtgagcgcaagagaaagtctgtccgtggctgcat 296
>ref|NM_061034.3| Caenorhabditis elegans Ribosomal Protein, Small subunit family member (rps-6) (rps-6) mRNA, complete cds Length = 806 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 374 gagcgcaggagaaagtccgtccgtggttgcat 405 ||||||| |||||||||||||||||| ||||| Sbjct: 290 gagcgcaagagaaagtccgtccgtggatgcat 321
>ref|NM_001003728.1| Danio rerio zgc:92237 (zgc:92237), mRNA Length = 842 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 424 tgttatcaacttggtgattgtcaagaagggtgagaa 459 |||| |||||||||| ||||||| |||||||||||| Sbjct: 345 tgttctcaacttggtcattgtcaggaagggtgagaa 380
>emb|AL132902.4|CEY71A12B Caenorhabditis elegans YAC Y71A12B, complete sequence Length = 137184 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 374 gagcgcaggagaaagtccgtccgtggttgcat 405 ||||||| |||||||||||||||||| ||||| Sbjct: 84063 gagcgcaagagaaagtccgtccgtggatgcat 84094
>gb|AY752838.1| Culicoides sonorensis clone CsRPS6A ribosomal protein S6 mRNA, partial cds Length = 1086 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 441 ttgtcaagaagggtgagaatgat 463 ||||||||||||||||||||||| Sbjct: 356 ttgtcaagaagggtgagaatgat 378
>ref|XM_654476.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1964.2), mRNA Length = 714 Score = 46.1 bits (23), Expect = 0.11 Identities = 59/71 (83%) Strand = Plus / Plus Query: 221 ggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttc 280 ||||| |||||||||||||| |||||||||||| ||||| || ||||| |||||| Sbjct: 124 ggtgacgaattcaagggttacctcttcaagatcactggtggtaacgacaagcaaggtttc 183 Query: 281 ccgatgaagca 291 || |||||||| Sbjct: 184 cccatgaagca 194
>gb|AY095266.1| Culicoides sonorensis RPS6 mRNA, partial cds Length = 804 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 441 ttgtcaagaagggtgagaatgat 463 ||||||||||||||||||||||| Sbjct: 74 ttgtcaagaagggtgagaatgat 96
>ref|NM_001015548.1| Bos taurus ribosomal protein S6 (RPS6), mRNA Length = 817 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 266 gataagcagggtttcccgatgaagca 291 ||||||||||||||||| |||||||| Sbjct: 198 gataagcagggtttccccatgaagca 223
>ref|XM_449621.1| Candida glabrata CBS138 hypothetical protein (CAGL0M06303g) partial mRNA Length = 711 Score = 44.1 bits (22), Expect = 0.45 Identities = 61/74 (82%) Strand = Plus / Plus Query: 221 ggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttc 280 ||||| |||||||||||||| | ||||||||| | ||||| || ||||| |||||| Sbjct: 124 ggtgatgaattcaagggttacaccttcaagattaccggtggtaacgacaagcaaggtttc 183 Query: 281 ccgatgaagcaagg 294 || ||||||||||| Sbjct: 184 ccaatgaagcaagg 197
>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence Length = 1400893 Score = 44.1 bits (22), Expect = 0.45 Identities = 61/74 (82%) Strand = Plus / Minus Query: 221 ggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttc 280 ||||| |||||||||||||| | ||||||||| | ||||| || ||||| |||||| Sbjct: 654593 ggtgatgaattcaagggttacaccttcaagattaccggtggtaacgacaagcaaggtttc 654534 Query: 281 ccgatgaagcaagg 294 || ||||||||||| Sbjct: 654533 ccaatgaagcaagg 654520
>gb|BC102493.1| Bos taurus ribosomal protein S6, mRNA (cDNA clone MGC:127553 IMAGE:7953793), complete cds Length = 869 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 266 gataagcagggtttcccgatgaagca 291 ||||||||||||||||| |||||||| Sbjct: 211 gataagcagggtttccccatgaagca 236
>gb|AY911358.1| Bos taurus clone IMAGE:7961497 ribosomal protein S6-like mRNA, complete cds Length = 832 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 266 gataagcagggtttcccgatgaagca 291 ||||||||||||||||| |||||||| Sbjct: 211 gataagcagggtttccccatgaagca 236
>gb|BT021025.1| Bos taurus ribosomal protein S6 (RPS6), mRNA, complete cds Length = 817 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 266 gataagcagggtttcccgatgaagca 291 ||||||||||||||||| |||||||| Sbjct: 198 gataagcagggtttccccatgaagca 223
>emb|AL928597.19| Mouse DNA sequence from clone RP23-373N5 on chromosome 4, complete sequence Length = 163961 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 255 tgggtggctgtgataagcaggg 276 |||||||||||||||||||||| Sbjct: 150128 tgggtggctgtgataagcaggg 150149
>emb|AL445208.11| Human DNA sequence from clone RP11-104N3 on chromosome 6, complete sequence Length = 60742 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 aggaggtagttggtgatcttc 218 ||||||||||||||||||||| Sbjct: 14137 aggaggtagttggtgatcttc 14157
>ref|XM_505593.1| Yarrowia lipolytica CLIB122, YALI0F18766g predicted mRNA Length = 729 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagt 297 |||||||||||||| |||||||| ||||| Sbjct: 172 aagcagggtttccccatgaagcagggagt 200
>emb|Z54308.1|SPAC13G6 S.pombe chromosome I cosmid c13G6 Length = 33481 Score = 42.1 bits (21), Expect = 1.8 Identities = 42/49 (85%) Strand = Plus / Minus Query: 369 atggtgagcgcaggagaaagtccgtccgtggttgcattgtcagccaaga 417 |||||||||||| | | || || |||||||||||||| ||| ||||||| Sbjct: 16137 atggtgagcgcaagcgtaaatctgtccgtggttgcatcgtcggccaaga 16089
>emb|BX296567.23| Zebrafish DNA sequence from clone DKEY-261P22 in linkage group 15, complete sequence Length = 224041 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 272 cagggtttcccgatgaagcaaggagtgct 300 |||||| ||||||||| |||||||||||| Sbjct: 212982 cagggtatcccgatgatgcaaggagtgct 213010 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 202141 cagggtatcccgatgatgcaaggagtgc 202168
>emb|BX649506.13| Zebrafish DNA sequence from clone DKEY-43L23 in linkage group 22, complete sequence Length = 110752 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 272 cagggtttcccgatgaagcaaggagtgct 300 |||||| ||||||||| |||||||||||| Sbjct: 6787 cagggtatcccgatgatgcaaggagtgct 6759
>ref|NM_001018234.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC13G6.07c), partial mRNA Length = 720 Score = 42.1 bits (21), Expect = 1.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 369 atggtgagcgcaggagaaagtccgtccgtggttgcattgtcagccaaga 417 |||||||||||| | | || || |||||||||||||| ||| ||||||| Sbjct: 266 atggtgagcgcaagcgtaaatctgtccgtggttgcatcgtcggccaaga 314
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 agaagaaggtcgagatcgatg 155 ||||||||||||||||||||| Sbjct: 10410333 agaagaaggtcgagatcgatg 10410353
>dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1104_G11 Length = 140093 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 agaagaaggtcgagatcgatg 155 ||||||||||||||||||||| Sbjct: 118038 agaagaaggtcgagatcgatg 118058
>dbj|AP005704.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0448B03 Length = 147748 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 agaagaaggtcgagatcgatg 155 ||||||||||||||||||||| Sbjct: 10712 agaagaaggtcgagatcgatg 10732
>emb|X02746.1|SCRPS102 Yeast gene for ribosomal protein S10-2 Length = 1500 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 221 ggtgaggaattcaagggttatatcttcaagatc 253 ||||| |||||||||||||| ||||||||||| Sbjct: 673 ggtgacgaattcaagggttacgtcttcaagatc 705
>gb|DQ332961.1| Synthetic construct Saccharomyces cerevisiae clone FLH113093.01X RPS6A gene, complete sequence Length = 1105 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 221 ggtgaggaattcaagggttatatcttcaagatc 253 ||||| |||||||||||||| ||||||||||| Sbjct: 518 ggtgacgaattcaagggttacgtcttcaagatc 550 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ttggtgattgtcaagaagggtgag 457 ||||| |||||||||||||||||| Sbjct: 725 ttggtcattgtcaagaagggtgag 748
>gb|U43281.1|SCU43281 Saccharomyces cerevisiae chromosome XVI cosmid 8059/8047 Length = 38669 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 221 ggtgaggaattcaagggttatatcttcaagatc 253 ||||| |||||||||||||| ||||||||||| Sbjct: 29482 ggtgacgaattcaagggttacgtcttcaagatc 29450 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 ttggtgattgtcaagaagggtgag 457 ||||| |||||||||||||||||| Sbjct: 29275 ttggtcattgtcaagaagggtgag 29252
>emb|BX649283.16| Zebrafish DNA sequence from clone DKEYP-86C4 in linkage group 14, complete sequence Length = 193551 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 272 cagggtttcccgatgaagcaaggagtgct 300 |||||| ||||||||| |||||||||||| Sbjct: 88942 cagggtatcccgatgatgcaaggagtgct 88914 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 35037 cagggtatcccgatgatgcaaggagtgc 35064
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 269 aagcagggtttcccgatgaagcaaggagt 297 |||||||||||||| |||||||| ||||| Sbjct: 2505687 aagcagggtttccccatgaagcagggagt 2505659
>gb|M36382.1|YSPRPS6A S.pombe ribosomal protein S6 (rps6) gene, complete cds Length = 1940 Score = 42.1 bits (21), Expect = 1.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 369 atggtgagcgcaggagaaagtccgtccgtggttgcattgtcagccaaga 417 |||||||||||| | | || || |||||||||||||| ||| ||||||| Sbjct: 760 atggtgagcgcaagcgtaaatctgtccgtggttgcatcgtcggccaaga 808
>gb|AY308769.1| Bothus lunatus recombinase activating gene-1 (RAG1) gene, partial cds Length = 1455 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 ggaggtagttggtgatcttc 218 |||||||||||||||||||| Sbjct: 1315 ggaggtagttggtgatcttc 1296
>gb|AY430215.1| Spirinchus thaleichthys recombination activating protein 1 (RAG1) gene, partial cds Length = 1472 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 ggaggtagttggtgatcttc 218 |||||||||||||||||||| Sbjct: 1335 ggaggtagttggtgatcttc 1316
>gb|AY380539.1| Salangichthys microdon recombination-activating protein 1 (RAG1) gene, partial cds Length = 1506 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 ggaggtagttggtgatcttc 218 |||||||||||||||||||| Sbjct: 1342 ggaggtagttggtgatcttc 1323
>gb|AY380538.1| Hypomesus olidus recombination-activating protein 1 (RAG1) gene, partial cds Length = 1555 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 ggaggtagttggtgatcttc 218 |||||||||||||||||||| Sbjct: 1364 ggaggtagttggtgatcttc 1345
>gb|AY380537.1| Thaleichthys pacificus recombination-activating protein 1 (RAG1) gene, partial cds Length = 1556 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 ggaggtagttggtgatcttc 218 |||||||||||||||||||| Sbjct: 1365 ggaggtagttggtgatcttc 1346
>gb|AY380536.1| Plecoglossus altivelis recombination-activating protein 1 (RAG1) gene, partial cds Length = 1556 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 ggaggtagttggtgatcttc 218 |||||||||||||||||||| Sbjct: 1365 ggaggtagttggtgatcttc 1346
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aggtcgagatcgatgacgac 160 |||||||||||||||||||| Sbjct: 2210306 aggtcgagatcgatgacgac 2210325
>ref|NM_012652.1| Rattus norvegicus solute carrier family 9, member 1 (Slc9a1), mRNA Length = 4581 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aggtagttggtgatcttctg 220 |||||||||||||||||||| Sbjct: 2824 aggtagttggtgatcttctg 2805
>ref|XM_455035.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E24090g predicted mRNA Length = 711 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 221 ggtgaggaattcaagggttatatcttcaagat 252 ||||| |||||||||||||| |||||||||| Sbjct: 124 ggtgatgaattcaagggttacgtcttcaagat 155
>gb|AC140074.2| Mus musculus BAC clone RP23-141A5 from chromosome 8, complete sequence Length = 190381 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 ctgagaagcccaggatgagg 502 |||||||||||||||||||| Sbjct: 137089 ctgagaagcccaggatgagg 137070
>emb|BX950868.13| Zebrafish DNA sequence from clone DKEY-54I3 in linkage group 5, complete sequence Length = 204339 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 137643 cagggtatcccgatgatgcaaggagtgc 137670
>gb|AC124584.5| Mus musculus BAC clone RP23-127B8 from chromosome 8, complete sequence Length = 193083 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 ctgagaagcccaggatgagg 502 |||||||||||||||||||| Sbjct: 98712 ctgagaagcccaggatgagg 98693
>gb|AC002310.1|HUAC002310 Human Chromosome 16 BAC clone CIT987SK-A-635H12, complete sequence Length = 120955 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 ggtgattgtcaagaagggtg 455 |||||||||||||||||||| Sbjct: 77184 ggtgattgtcaagaagggtg 77165
>emb|CR847906.11| Zebrafish DNA sequence from clone DKEYP-4C4 in linkage group 6, complete sequence Length = 198346 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 10081 cagggtatcccgatgatgcaaggagtgc 10108
>emb|BX465848.13| Zebrafish DNA sequence from clone RP71-84E6, complete sequence Length = 179411 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 57412 cagggtatcccgatgatgcaaggagtgc 57439
>ref|NM_016981.1| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 1 (Slc9a1), mRNA Length = 4126 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aggtagttggtgatcttctg 220 |||||||||||||||||||| Sbjct: 2378 aggtagttggtgatcttctg 2359
>gb|BC052708.1| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 1, mRNA (cDNA clone MGC:64648 IMAGE:5702902), complete cds Length = 3907 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aggtagttggtgatcttctg 220 |||||||||||||||||||| Sbjct: 2717 aggtagttggtgatcttctg 2698
>gb|BC051431.1| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 1, mRNA (cDNA clone MGC:58902 IMAGE:6529306), complete cds Length = 3989 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aggtagttggtgatcttctg 220 |||||||||||||||||||| Sbjct: 2182 aggtagttggtgatcttctg 2163
>gb|AY237124.1| Anopheles stephensi ribosomal protein S6 mRNA, complete cds Length = 1526 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 215 aagcagggtttccccatgaagcagggtgtgct 246
>emb|BX066711.1|CNS09NMZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC50AE02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 951 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 516 aagcagggtttccccatgaagcagggtgtgct 547
>emb|BX059515.1|CNS09I33 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC4BE11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 184 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX058216.1|CNS09H30 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC38BH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 892 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX056134.1|CNS09FH6 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC35AH10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 245 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX055757.1|CNS09F6P Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC34CA08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 561 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX050628.1|CNS09B88 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC27AH08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 547 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX030915.1|CNS08W0N Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA46AF04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 923 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX048890.1|CNS099VY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC24BE09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 376 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX048575.1|CNS099N7 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC23DC08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 692 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX047758.1|CNS0990I Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC22BH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 192 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX044475.1|CNS096HB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC18AG01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 337 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 159 aagcagggtttccccatgaagcagggtgtgct 190
>emb|BX039668.1|CNS092RS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC10AC12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 878 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX037239.1|CNS090WB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA9CE05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 854 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX032182.1|CNS08WZU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA47DG10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 648 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX031918.1|CNS08WSI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA47CC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 626 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX029508.1|CNS08UXK Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA44AD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 905 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX028944.1|CNS08UHW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA43BA12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 535 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX028102.1|CNS08TUI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA42AB07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 625 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX027648.1|CNS08THW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA41BE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 777 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 247 aagcagggtttccccatgaagcagggtgtgct 278
>emb|BX027277.1|CNS08T7L Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA40DE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 622 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX026133.1|CNS08SBT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA4BC02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 539 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX025301.1|CNS08ROP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA38DB10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 628 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX019556.1|CNS08N94 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA29DD11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 126 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX020908.1|CNS08OAO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA30DE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 609 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX019904.1|CNS08NIS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA3BD07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 869 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 89 aagcagggtttccccatgaagcagggtgtgct 120
>emb|BX017102.1|CNS08LCY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA25CG11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 233 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX016862.1|CNS08L6A Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA25BD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 555 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX015584.1|CNS08K6S Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA23BF07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 838 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX015062.1|CNS08JSA Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA22CE10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 202 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX013131.1|CNS08IAN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA2DB11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 922 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX010706.1|CNS08GFA Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA17AG06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 625 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX010177.1|CNS08G0L Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA16BE08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 726 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 208 aagcagggtttccccatgaagcagggtgtgct 239
>emb|BX009176.1|CNS08F8S Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA14DG07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 896 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>ref|XM_775406.1| PREDICTED: Strongylocentrotus purpuratus similar to 40S ribosomal protein S6, transcript variant 1 (LOC577989), mRNA Length = 940 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 429 tcaacttggtgattgtcaagaagggtga 456 ||||| |||| ||||||||||||||||| Sbjct: 348 tcaacctggtcattgtcaagaagggtga 375
>ref|XM_796910.1| PREDICTED: Strongylocentrotus purpuratus similar to 40S ribosomal protein S6, transcript variant 5 (LOC577989), mRNA Length = 916 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 429 tcaacttggtgattgtcaagaagggtga 456 ||||| |||| ||||||||||||||||| Sbjct: 348 tcaacctggtcattgtcaagaagggtga 375
>ref|XM_796878.1| PREDICTED: Strongylocentrotus purpuratus similar to 40S ribosomal protein S6, transcript variant 4 (LOC577989), mRNA Length = 931 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 429 tcaacttggtgattgtcaagaagggtga 456 ||||| |||| ||||||||||||||||| Sbjct: 348 tcaacctggtcattgtcaagaagggtga 375
>ref|XM_796845.1| PREDICTED: Strongylocentrotus purpuratus similar to 40S ribosomal protein S6, transcript variant 3 (LOC577989), mRNA Length = 648 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 429 tcaacttggtgattgtcaagaagggtga 456 ||||| |||| ||||||||||||||||| Sbjct: 348 tcaacctggtcattgtcaagaagggtga 375
>gb|DQ131904.1| Homo sapiens integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide) (ITGAL) gene, complete cds Length = 53535 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 ggtgattgtcaagaagggtg 455 |||||||||||||||||||| Sbjct: 38940 ggtgattgtcaagaagggtg 38959
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 221 ggtgaggaattcaagggttatatcttcaagat 252 ||||| |||||||||||||| |||||||||| Sbjct: 2142829 ggtgatgaattcaagggttacgtcttcaagat 2142860
>emb|BX548011.28| Zebrafish DNA sequence from clone DKEY-237G15, complete sequence Length = 211004 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 10774 cagggtatcccgatgatgcaaggagtgc 10747
>emb|CR790376.10| Zebrafish DNA sequence from clone DKEY-66K12 in linkage group 4, complete sequence Length = 92591 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 64189 cagggtatcccgatgatgcaaggagtgc 64216 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 10785 cagggtatcccgatgatgcaaggagtgc 10812
>emb|BX321871.5| Zebrafish DNA sequence from clone CH211-241N15 in linkage group 8, complete sequence Length = 174723 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 7470 cagggtatcccgatgatgcaaggagtgc 7497
>gb|AC101986.10| Mus musculus chromosome 7, clone RP24-353K18, complete sequence Length = 187803 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ctgggtgaggaattcaaggg 237 |||||||||||||||||||| Sbjct: 16174 ctgggtgaggaattcaaggg 16155
>gb|AC158574.6| Mus musculus chromosome 7, clone RP24-275O6, complete sequence Length = 160525 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ctgggtgaggaattcaaggg 237 |||||||||||||||||||| Sbjct: 68236 ctgggtgaggaattcaaggg 68255
>gb|AC090480.11| Mus Musculus Strain C57BL6/J chromosome 8 BAC, RP23-248L18, Complete Sequence, complete sequence Length = 231039 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 ctgagaagcccaggatgagg 502 |||||||||||||||||||| Sbjct: 199957 ctgagaagcccaggatgagg 199938
>emb|BX469910.10| Zebrafish DNA sequence from clone CH211-64I20 in linkage group 8, complete sequence Length = 198019 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 98644 cagggtatcccgatgatgcaaggagtgc 98617 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 60957 cagggtatcccgatgatgcaaggagtgc 60984
>emb|BX571711.8| Zebrafish DNA sequence from clone DKEY-57L19 in linkage group 21, complete sequence Length = 193674 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 1969 cagggtatcccgatgatgcaaggagtgc 1942
>dbj|AK154857.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630109M11 product:solute carrier family 9 (sodium/hydrogen exchanger), member 1, full insert sequence Length = 4191 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aggtagttggtgatcttctg 220 |||||||||||||||||||| Sbjct: 2872 aggtagttggtgatcttctg 2853
>ref|XM_692923.1| PREDICTED: Danio rerio similar to FERM, RhoGEF, and pleckstrin domain protein 1 isoform 1 (LOC569529), partial mRNA Length = 3310 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 2334 cagggtatcccgatgatgcaaggagtgc 2361
>dbj|AK150135.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530135M05 product:solute carrier family 9 (sodium/hydrogen exchanger), member 1, full insert sequence Length = 4609 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aggtagttggtgatcttctg 220 |||||||||||||||||||| Sbjct: 2838 aggtagttggtgatcttctg 2819
>dbj|AK162209.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420457F09 product:solute carrier family 9 (sodium/hydrogen exchanger), member 1, full insert sequence Length = 1624 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aggtagttggtgatcttctg 220 |||||||||||||||||||| Sbjct: 166 aggtagttggtgatcttctg 147
>ref|XM_685041.1| PREDICTED: Danio rerio similar to zinc finger protein 251 (LOC561629), mRNA Length = 2475 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 1387 cagggtatcccgatgatgcaaggagtgc 1414
>emb|AJ504414.1|KLA504414 Kluyveromyces lactis glr1 gene for putative glutathione oxidoreductase and partial rps6 gene for putative 40S ribosomal protein S6 Length = 3674 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 221 ggtgaggaattcaagggttatatcttcaagat 252 ||||| |||||||||||||| |||||||||| Sbjct: 3600 ggtgatgaattcaagggttacgtcttcaagat 3569
>emb|BX324003.7| Zebrafish DNA sequence from clone DKEY-81I14 in linkage group 17, complete sequence Length = 247607 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 166901 cagggtatcccgatgatgcaaggagtgc 166928
>gb|S53430.1| S10=ribosomal protein [Kluyveromyces marxianus, Genomic, 1894 nt] Length = 1894 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 221 ggtgaggaattcaagggttatatcttcaagat 252 ||||| |||||||||||||| |||||||||| Sbjct: 1219 ggtgatgaattcaagggttacgtcttcaagat 1250
>emb|BX649307.12| Zebrafish DNA sequence from clone CH211-209P16 in linkage group 4, complete sequence Length = 164976 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 131776 cagggtatcccgatgatgcaaggagtgc 131749
>emb|BX465205.16| Zebrafish DNA sequence from clone CH211-197E7 in linkage group 23, complete sequence Length = 189019 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 40289 cagggtatcccgatgatgcaaggagtgc 40262
>gb|BC004687.1| Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 1, mRNA (cDNA clone IMAGE:3500839), partial cds Length = 1833 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aggtagttggtgatcttctg 220 |||||||||||||||||||| Sbjct: 42 aggtagttggtgatcttctg 23
>emb|BX539341.8| Zebrafish DNA sequence from clone DKEY-3P4 in linkage group 22, complete sequence Length = 236484 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 52429 cagggtatcccgatgatgcaaggagtgc 52456
>gb|AC116348.3| Homo sapiens chromosome 16 clone RP11-297C4, complete sequence Length = 149508 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 ggtgattgtcaagaagggtg 455 |||||||||||||||||||| Sbjct: 10901 ggtgattgtcaagaagggtg 10882
>gb|AC157521.2| Mus musculus BAC clone RP23-103M13 from chromosome 15, complete sequence Length = 194306 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 gaatctcccaggaggtagtt 208 |||||||||||||||||||| Sbjct: 94900 gaatctcccaggaggtagtt 94881
>emb|BX649341.3| Zebrafish DNA sequence from clone DKEY-199K11 in linkage group 22, complete sequence Length = 148057 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 146300 cagggtatcccgatgatgcaaggagtgc 146327
>emb|BX321870.12| Zebrafish DNA sequence from clone RP71-42A14 in linkage group 22, complete sequence Length = 165445 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 158314 cagggtatcccgatgatgcaaggagtgc 158341
>emb|BX649620.5| Zebrafish DNA sequence from clone DKEY-11N14 in linkage group 20, complete sequence Length = 61794 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 61763 cagggtatcccgatgatgcaaggagtgc 61736
>emb|BX649328.6| Zebrafish DNA sequence from clone DKEY-72L17 in linkage group 20, complete sequence Length = 224173 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 109783 cagggtatcccgatgatgcaaggagtgc 109756
>ref|XM_311986.2| Anopheles gambiae str. PEST ENSANGP00000011100 (ENSANGG00000008611), partial mRNA Length = 1244 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 273 aagcagggtttccccatgaagcagggtgtgct 304
>dbj|AK108193.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C04, full insert sequence Length = 993 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 370 tggtgagcgcaggagaaagtccgtccgtggttgcat 405 ||||||||||| | | |||||||||||||| ||||| Sbjct: 317 tggtgagcgcaagcgcaagtccgtccgtggctgcat 352
>emb|BX842593.8| Zebrafish DNA sequence from clone DKEY-19K8 in linkage group 20, complete sequence Length = 127151 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 36741 cagggtatcccgatgatgcaaggagtgc 36714
>emb|BX510947.20| Zebrafish DNA sequence from clone DKEY-226F16 in linkage group 4, complete sequence Length = 125275 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 49088 cagggtatcccgatgatgcaaggagtgc 49115
>emb|CR854899.16| Zebrafish DNA sequence from clone CH211-268B14 in linkage group 14, complete sequence Length = 142230 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 cagggtttcccgatgaagcaaggagtgc 299 |||||| ||||||||| ||||||||||| Sbjct: 99595 cagggtatcccgatgatgcaaggagtgc 99622
>tpe|BN000162.1|AGA000162 TPA: TPA_inf: Anopheles gambiae str. PEST rpS6 gene for ribosomal protein S6 Length = 1988 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 269 aagcagggtttcccgatgaagcaaggagtgct 300 |||||||||||||| |||||||| || ||||| Sbjct: 766 aagcagggtttccccatgaagcagggtgtgct 797
>gb|M85299.1|RATNHEXI Rat sodium/hydrogen exchange protein-isoform 1 (NHE-1) mRNA, complete cds Length = 4581 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aggtagttggtgatcttctg 220 |||||||||||||||||||| Sbjct: 2824 aggtagttggtgatcttctg 2805
>gb|U51112.1|MMU51112 Mus musculus Na+/H+ exchanger (NHE-1) mRNA, complete cds Length = 4126 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aggtagttggtgatcttctg 220 |||||||||||||||||||| Sbjct: 2378 aggtagttggtgatcttctg 2359
>emb|Z83274.1|SPZ83274 S.purpuratus mRNA for ribosomal protein S6 Length = 371 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 429 tcaacttggtgattgtcaagaagggtga 456 ||||| |||| ||||||||||||||||| Sbjct: 158 tcaacctggtcattgtcaagaagggtga 185 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,285,591 Number of Sequences: 3902068 Number of extensions: 3285591 Number of successful extensions: 56937 Number of sequences better than 10.0: 179 Number of HSP's better than 10.0 without gapping: 179 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 56515 Number of HSP's gapped (non-prelim): 405 length of query: 515 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 492 effective length of database: 17,143,297,704 effective search space: 8434502470368 effective search space used: 8434502470368 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
