Clone Name | bart08d01 |
---|---|
Clone Library Name | barley_pub |
>CG020_MOUSE (Q9D1H7) UPF0363 protein C7orf20 homolog| Length = 327 Score = 58.9 bits (141), Expect = 8e-09 Identities = 25/89 (28%), Positives = 52/89 (58%) Frame = +3 Query: 177 QKTIERFEKMVEGGSYYEAQQMFKSTSARYITCQRYSEGLDILQSGATVQLKHGQVTCGA 356 Q+ + VE G YYEA QM+++ RY++ +++E +++ SGA + HGQ A Sbjct: 24 QRVEGKLRASVEKGDYYEAHQMYRTLFFRYMSQSKHAEARELMYSGALLFFSHGQQNSAA 83 Query: 357 ELAVLFVDTLVKGQFPYXEQTFDRVRKIY 443 +L++L +++L K + ++ + + K++ Sbjct: 84 DLSMLVLESLEKAEVDVADELLENLAKVF 112
>CG020_HUMAN (Q7L5D6) UPF0363 protein C7orf20| Length = 327 Score = 58.9 bits (141), Expect = 8e-09 Identities = 25/89 (28%), Positives = 52/89 (58%) Frame = +3 Query: 177 QKTIERFEKMVEGGSYYEAQQMFKSTSARYITCQRYSEGLDILQSGATVQLKHGQVTCGA 356 Q+ + VE G YYEA QM+++ RY++ +++E +++ SGA + HGQ A Sbjct: 24 QRVEGKLRASVEKGDYYEAHQMYRTLFFRYMSQSKHTEARELMYSGALLFFSHGQQNSAA 83 Query: 357 ELAVLFVDTLVKGQFPYXEQTFDRVRKIY 443 +L++L +++L K + ++ + + K++ Sbjct: 84 DLSMLVLESLEKAEVEVADELLENLAKVF 112
>YO164_YEAST (Q12125) UPF0363 protein YOR164C| Length = 312 Score = 48.9 bits (115), Expect = 8e-06 Identities = 21/61 (34%), Positives = 35/61 (57%) Frame = +3 Query: 180 KTIERFEKMVEGGSYYEAQQMFKSTSARYITCQRYSEGLDILQSGATVQLKHGQVTCGAE 359 KT++RFE ++ G YYEA Q ++ + RY+ + Y ++++ GA LK Q G + Sbjct: 15 KTLQRFENKIKAGDYYEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTD 74 Query: 360 L 362 L Sbjct: 75 L 75
>YC4C_SCHPO (O74432) UPF0363 protein C1672.12c| Length = 303 Score = 33.9 bits (76), Expect = 0.27 Identities = 18/77 (23%), Positives = 33/77 (42%) Frame = +3 Query: 225 YEAQQMFKSTSARYITCQRYSEGLDILQSGATVQLKHGQVTCGAELAVLFVDTLVKGQFP 404 YE QM ++ R + +++ + + +L SGA + Q A+LA+ +D K + Sbjct: 17 YEGHQMLRTLVNRQVKAKKHDDAVALLYSGAKTLFEIEQTGSAADLAIYMLDVYEKASYA 76 Query: 405 YXEQTFDRVRKIYEAFP 455 R + FP Sbjct: 77 ASLDNKARALTLLGLFP 93
>YEC3_YEAST (P39992) Hypothetical 78.3 kDa protein in RIP1-GEA2 intergenic| region Length = 682 Score = 33.5 bits (75), Expect = 0.35 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -3 Query: 195 IFRLSSVEAAGRGARPTSCSGSGTETWLSGEHGGVGGDW 79 IF+L S++ +G +R T E W G+H VGG W Sbjct: 358 IFQLQSIQGSGTSSRMTMTPDL-IEKWFPGDHSDVGGGW 395
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 32.3 bits (72), Expect = 0.79 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Frame = +2 Query: 68 TPRFQSPPTPPCSPESH-VSVPEPEHEVGLAPRPAASTEDNRKI*EDGGRGKLL 226 TP PPTPP S + V+ P E+G P+ AAS D+ + D K L Sbjct: 4346 TPPSSLPPTPPPSVQQKMVNGVTPSEELGEHPKDAASARDSERALRDTSEVKSL 4399
>CLPB2_SYNPX (Q7U3T3) Chaperone clpB 2| Length = 900 Score = 31.2 bits (69), Expect = 1.8 Identities = 17/45 (37%), Positives = 21/45 (46%) Frame = +2 Query: 89 PTPPCSPESHVSVPEPEHEVGLAPRPAASTEDNRKI*EDGGRGKL 223 PTP +P V PEPE V L P+A R + E+ G L Sbjct: 171 PTPRSAPAPRVMAPEPEPMVELEREPSALEAYGRDLTEEAEAGSL 215
>WRK48_ARATH (Q9FGZ4) Probable WRKY transcription factor 48 (WRKY DNA-binding| protein 48) Length = 399 Score = 30.4 bits (67), Expect = 3.0 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 437 LSDTIKSLFXIRKLPFDKSVHEQHSEFSTTSYLSMLQLD 321 L+ + S+F LPF S E HS + S+L +L+ D Sbjct: 63 LAGNLSSIFDTSSLPFPYSYFEDHSSNNPNSFLDLLRQD 101
>WRIP1_HUMAN (Q96S55) ATPase WRNIP1 (Werner helicase-interacting protein 1)| Length = 665 Score = 30.4 bits (67), Expect = 3.0 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = -3 Query: 234 GPRSNFPLPPSSQIFRLSSVEAAGRGARPTSCSGSGTETWLSGEHGGVGGD 82 G R+ P PP ++ RLS A + A PT+ S E GE G GG+ Sbjct: 58 GERAKGPSPPGAKRRRLSESSALKQPATPTAAESSEGE----GEEGDDGGE 104
>WRIP1_RAT (Q8CG07) ATPase WRNIP1 (Werner helicase-interacting protein 1)| Length = 660 Score = 30.4 bits (67), Expect = 3.0 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = -3 Query: 234 GPRSNFPLPPSSQIFRLSSVEAAGRGARPTSCSGSGTETWLSGEHGGVGGD 82 G R+ P PP ++ RLS A + A PT+ S E GE G GG+ Sbjct: 58 GERAKGPSPPGAKRRRLSESSALKQPATPTAAESSEGE----GEEGDDGGE 104
>WRIP1_MOUSE (Q91XU0) ATPase WRNIP1 (Werner helicase-interacting protein 1)| Length = 660 Score = 30.4 bits (67), Expect = 3.0 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = -3 Query: 234 GPRSNFPLPPSSQIFRLSSVEAAGRGARPTSCSGSGTETWLSGEHGGVGGD 82 G R+ P PP ++ RLS A + A PT+ S E GE G GG+ Sbjct: 58 GERAKGPSPPGAKRRRLSESSALKQPATPTAAESSEGE----GEEGDDGGE 104
>ZSWM5_MOUSE (Q80TC6) Zinc finger SWIM domain-containing protein 5| Length = 1188 Score = 30.4 bits (67), Expect = 3.0 Identities = 20/55 (36%), Positives = 29/55 (52%) Frame = -3 Query: 216 PLPPSSQIFRLSSVEAAGRGARPTSCSGSGTETWLSGEHGGVGGDWNRGVRYRNS 52 P PP + S+ AAG G+ P +G+GT + G GG G + RG+R +S Sbjct: 140 PPPPGAAAPAGSAPGAAGAGSSPGLGAGTGTAS--GGCGGGEGLPFRRGIRLLDS 192
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 30.0 bits (66), Expect = 3.9 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +2 Query: 2 KIPCSVLTPEAQLVSXAEFL*RTPRFQSPPTPPCSPESHVSV 127 ++P LTP AQ++ + T Q P PP P+ H +V Sbjct: 2241 QMPTQPLTPYAQIMQSLQLSSPTLSPQDPAVPPSEPKPHAAV 2282 Score = 28.9 bits (63), Expect = 8.7 Identities = 18/67 (26%), Positives = 31/67 (46%) Frame = +3 Query: 168 PPPQKTIERFEKMVEGGSYYEAQQMFKSTSARYITCQRYSEGLDILQSGATVQLKHGQVT 347 PPPQ + ++ M+ E + + ++ R+ R ++ D AT + GQ T Sbjct: 754 PPPQVSWKKDGSMLHS----EGRLLIRAEGERHTLLLREAQAADAGSYTATATNELGQAT 809 Query: 348 CGAELAV 368 C + LAV Sbjct: 810 CASSLAV 816
>RAIN_HUMAN (Q5U651) Ras-interacting protein 1 (Rain)| Length = 963 Score = 29.6 bits (65), Expect = 5.1 Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 9/58 (15%) Frame = -3 Query: 234 GPRSNFPLPPSS---QIFRLSSVEAAG--RGARPTSCS----GSGTETWLSGEHGGVG 88 G RS+ PLPP ++ R+ +V+AAG G+R S GSGT T S GG G Sbjct: 53 GSRSSEPLPPPPPHVELRRVGAVKAAGGASGSRAKRISQLFRGSGTGTTGSSGAGGPG 110
>FIBA1_PETMA (P02674) Fibrinogen alpha-1 chain precursor [Contains:| Fibrinopeptide A] (Fragment) Length = 966 Score = 29.6 bits (65), Expect = 5.1 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 10/61 (16%) Frame = -3 Query: 165 GRGARPTSCSGSGTE-TWLSGEH------GGVGGDWNRGVRYR---NSAXETSWASGVRT 16 G G R +GSG +W +G G GG W G R SA SW +G RT Sbjct: 689 GTGGRTEPNTGSGQGGSWSTGGRTEPNTGSGQGGSWGTGGRTEPNTGSAQGGSWGTGGRT 748 Query: 15 E 13 E Sbjct: 749 E 749 Score = 28.9 bits (63), Expect = 8.7 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 10/61 (16%) Frame = -3 Query: 165 GRGARPTSCSGSGTE-TWLSGEH------GGVGGDWNRGVRYR---NSAXETSWASGVRT 16 G G R +GSG +W +G G GG W G R SA SW +G RT Sbjct: 437 GTGGRTEPNTGSGQGGSWGTGGRTEPNTGSGQGGSWGTGGRTEPNTGSAQGGSWGTGGRT 496 Query: 15 E 13 E Sbjct: 497 E 497
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 29.6 bits (65), Expect = 5.1 Identities = 18/54 (33%), Positives = 26/54 (48%) Frame = +2 Query: 71 PRFQSPPTPPCSPESHVSVPEPEHEVGLAPRPAASTEDNRKI*EDGGRGKLLRG 232 P F +PP+ P +P + S P P G AP+P + R G+G +RG Sbjct: 130 PEFTAPPSAPAAPAAAASGPRPGARPG-APKPGGA----RPATPGQGQGGQVRG 178
>ZN219_HUMAN (Q9P2Y4) Zinc finger protein 219| Length = 722 Score = 29.6 bits (65), Expect = 5.1 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Frame = +2 Query: 26 PEAQLVSXAEFL*RTPRFQSPPTP-PCSPESHVSVPEPEHEVGLAPRPAASTE 181 PE L + + P+ Q PP P P S PEPE E P PAA E Sbjct: 215 PERPLAATSAAPPPQPQPQPPPQPEPRSVPQPEPEPEPEREATPTPAPAAPEE 267
>MK15_HUMAN (Q8TD08) Mitogen-activated protein kinase 15 (EC 2.7.11.24)| (Extracellular signal-regulated kinase 8) Length = 544 Score = 29.3 bits (64), Expect = 6.7 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -3 Query: 186 LSSVEAAGRGARPTSCSGSGTETWLSGEHGGVGGDWNRG 70 LS V+ +GRGA P+ S + + + GDWNRG Sbjct: 441 LSLVKPSGRGAAPSLTSQAAAQV---ANQALIRGDWNRG 476
>TONB_KLEPN (P45610) Protein tonB| Length = 243 Score = 29.3 bits (64), Expect = 6.7 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +2 Query: 71 PRFQSPPTPPCSPESHVSVPEPEHEVGLAPRPAASTEDN 187 P+ + P P PE V P+ E + PRPA+ E+N Sbjct: 94 PKPKPKPKPKPKPEKKVEQPKREVKPAAEPRPASPFENN 132
>CITE2_MOUSE (O35740) Cbp/p300-interacting transactivator 2 (MSG-related protein| 1) (MRG-1) Length = 269 Score = 28.9 bits (63), Expect = 8.7 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = -3 Query: 231 PRSNFPLPPSSQIFRLSSVEAAGRGARPTSCSGSGTETWLSGEHGGVGG 85 P + + ++Q FR + + +G + P GSGT G GG GG Sbjct: 140 PTAGHQMNGTNQHFRDCNPKHSGGSSTPGGAGGSGTPGGSGGTSGGAGG 188
>FGD1_MOUSE (P52734) FYVE, RhoGEF and PH domain-containing protein 1| (Faciogenital dysplasia 1 protein homolog) (Zinc finger FYVE domain-containing protein 3) (Rho/Rac guanine nucleotide exchange factor FGD1) (Rho/Rac GEF) Length = 960 Score = 28.9 bits (63), Expect = 8.7 Identities = 18/51 (35%), Positives = 23/51 (45%) Frame = +2 Query: 26 PEAQLVSXAEFL*RTPRFQSPPTPPCSPESHVSVPEPEHEVGLAPRPAAST 178 P+ Q+ +L + PR PP P P S +P GL PR AST Sbjct: 157 PKPQVPPKPSYL-QMPRVLPPPEPIPPPPSRPLPADPRVAKGLVPRAEAST 206
>TRIB1_HUMAN (Q96RU8) Tribbles homolog 1 (TRB-1) (SKIP1) (G-protein-coupled| receptor induced protein 2) (GIG-2) Length = 372 Score = 28.9 bits (63), Expect = 8.7 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +2 Query: 71 PRFQSPPTPPCSPESHVSVPEPEHEVGLAPRPA 169 P + SPP PCSP+ + P G AP P+ Sbjct: 57 PDYLSPPGSPCSPQPPPAAPGAGGGSGSAPGPS 89
>TOC75_ORYSA (Q84Q83) Protein TOC75, chloroplast precursor (75 kDa translocon at| the outer-envelope-membrane of chloroplasts) Length = 817 Score = 28.9 bits (63), Expect = 8.7 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = -3 Query: 201 SQIFRLSS-VEAAGRGARPTSCSGSGTETWLSGEHGGVGGDWNRG 70 S+ F L+S + AA GA + SG G G GG GG W G Sbjct: 65 SKTFALASAITAAASGAFLLASSGGGFGGGAGGPLGGGGGGWGAG 109
>LIMD1_MOUSE (Q9QXD8) LIM domains-containing protein 1| Length = 668 Score = 28.9 bits (63), Expect = 8.7 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = -3 Query: 147 TSCSGSGTETWLSGEHGGVGG 85 T CSG E+ +SG+ GG+GG Sbjct: 229 TVCSGRSFESGISGQDGGIGG 249 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,278,990 Number of Sequences: 219361 Number of extensions: 1700987 Number of successful extensions: 6845 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 6111 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6796 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)