ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart08d01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CG020_MOUSE (Q9D1H7) UPF0363 protein C7orf20 homolog 59 8e-09
2CG020_HUMAN (Q7L5D6) UPF0363 protein C7orf20 59 8e-09
3YO164_YEAST (Q12125) UPF0363 protein YOR164C 49 8e-06
4YC4C_SCHPO (O74432) UPF0363 protein C1672.12c 34 0.27
5YEC3_YEAST (P39992) Hypothetical 78.3 kDa protein in RIP1-GEA2 i... 33 0.35
6MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia p... 32 0.79
7CLPB2_SYNPX (Q7U3T3) Chaperone clpB 2 31 1.8
8WRK48_ARATH (Q9FGZ4) Probable WRKY transcription factor 48 (WRKY... 30 3.0
9WRIP1_HUMAN (Q96S55) ATPase WRNIP1 (Werner helicase-interacting ... 30 3.0
10WRIP1_RAT (Q8CG07) ATPase WRNIP1 (Werner helicase-interacting pr... 30 3.0
11WRIP1_MOUSE (Q91XU0) ATPase WRNIP1 (Werner helicase-interacting ... 30 3.0
12ZSWM5_MOUSE (Q80TC6) Zinc finger SWIM domain-containing protein 5 30 3.0
13SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine pr... 30 3.9
14RAIN_HUMAN (Q5U651) Ras-interacting protein 1 (Rain) 30 5.1
15FIBA1_PETMA (P02674) Fibrinogen alpha-1 chain precursor [Contain... 30 5.1
16IF2_STRAW (Q82K53) Translation initiation factor IF-2 30 5.1
17ZN219_HUMAN (Q9P2Y4) Zinc finger protein 219 30 5.1
18MK15_HUMAN (Q8TD08) Mitogen-activated protein kinase 15 (EC 2.7.... 29 6.7
19TONB_KLEPN (P45610) Protein tonB 29 6.7
20CITE2_MOUSE (O35740) Cbp/p300-interacting transactivator 2 (MSG-... 29 8.7
21FGD1_MOUSE (P52734) FYVE, RhoGEF and PH domain-containing protei... 29 8.7
22TRIB1_HUMAN (Q96RU8) Tribbles homolog 1 (TRB-1) (SKIP1) (G-prote... 29 8.7
23TOC75_ORYSA (Q84Q83) Protein TOC75, chloroplast precursor (75 kD... 29 8.7
24LIMD1_MOUSE (Q9QXD8) LIM domains-containing protein 1 29 8.7

>CG020_MOUSE (Q9D1H7) UPF0363 protein C7orf20 homolog|
          Length = 327

 Score = 58.9 bits (141), Expect = 8e-09
 Identities = 25/89 (28%), Positives = 52/89 (58%)
 Frame = +3

Query: 177 QKTIERFEKMVEGGSYYEAQQMFKSTSARYITCQRYSEGLDILQSGATVQLKHGQVTCGA 356
           Q+   +    VE G YYEA QM+++   RY++  +++E  +++ SGA +   HGQ    A
Sbjct: 24  QRVEGKLRASVEKGDYYEAHQMYRTLFFRYMSQSKHAEARELMYSGALLFFSHGQQNSAA 83

Query: 357 ELAVLFVDTLVKGQFPYXEQTFDRVRKIY 443
           +L++L +++L K +    ++  + + K++
Sbjct: 84  DLSMLVLESLEKAEVDVADELLENLAKVF 112



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>CG020_HUMAN (Q7L5D6) UPF0363 protein C7orf20|
          Length = 327

 Score = 58.9 bits (141), Expect = 8e-09
 Identities = 25/89 (28%), Positives = 52/89 (58%)
 Frame = +3

Query: 177 QKTIERFEKMVEGGSYYEAQQMFKSTSARYITCQRYSEGLDILQSGATVQLKHGQVTCGA 356
           Q+   +    VE G YYEA QM+++   RY++  +++E  +++ SGA +   HGQ    A
Sbjct: 24  QRVEGKLRASVEKGDYYEAHQMYRTLFFRYMSQSKHTEARELMYSGALLFFSHGQQNSAA 83

Query: 357 ELAVLFVDTLVKGQFPYXEQTFDRVRKIY 443
           +L++L +++L K +    ++  + + K++
Sbjct: 84  DLSMLVLESLEKAEVEVADELLENLAKVF 112



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>YO164_YEAST (Q12125) UPF0363 protein YOR164C|
          Length = 312

 Score = 48.9 bits (115), Expect = 8e-06
 Identities = 21/61 (34%), Positives = 35/61 (57%)
 Frame = +3

Query: 180 KTIERFEKMVEGGSYYEAQQMFKSTSARYITCQRYSEGLDILQSGATVQLKHGQVTCGAE 359
           KT++RFE  ++ G YYEA Q  ++ + RY+  + Y   ++++  GA   LK  Q   G +
Sbjct: 15  KTLQRFENKIKAGDYYEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTD 74

Query: 360 L 362
           L
Sbjct: 75  L 75



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>YC4C_SCHPO (O74432) UPF0363 protein C1672.12c|
          Length = 303

 Score = 33.9 bits (76), Expect = 0.27
 Identities = 18/77 (23%), Positives = 33/77 (42%)
 Frame = +3

Query: 225 YEAQQMFKSTSARYITCQRYSEGLDILQSGATVQLKHGQVTCGAELAVLFVDTLVKGQFP 404
           YE  QM ++   R +  +++ + + +L SGA    +  Q    A+LA+  +D   K  + 
Sbjct: 17  YEGHQMLRTLVNRQVKAKKHDDAVALLYSGAKTLFEIEQTGSAADLAIYMLDVYEKASYA 76

Query: 405 YXEQTFDRVRKIYEAFP 455
                  R   +   FP
Sbjct: 77  ASLDNKARALTLLGLFP 93



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>YEC3_YEAST (P39992) Hypothetical 78.3 kDa protein in RIP1-GEA2 intergenic|
           region
          Length = 682

 Score = 33.5 bits (75), Expect = 0.35
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 195 IFRLSSVEAAGRGARPTSCSGSGTETWLSGEHGGVGGDW 79
           IF+L S++ +G  +R T       E W  G+H  VGG W
Sbjct: 358 IFQLQSIQGSGTSSRMTMTPDL-IEKWFPGDHSDVGGGW 395



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>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2|
            (ALL1-related protein)
          Length = 5262

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +2

Query: 68   TPRFQSPPTPPCSPESH-VSVPEPEHEVGLAPRPAASTEDNRKI*EDGGRGKLL 226
            TP    PPTPP S +   V+   P  E+G  P+ AAS  D+ +   D    K L
Sbjct: 4346 TPPSSLPPTPPPSVQQKMVNGVTPSEELGEHPKDAASARDSERALRDTSEVKSL 4399



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>CLPB2_SYNPX (Q7U3T3) Chaperone clpB 2|
          Length = 900

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +2

Query: 89  PTPPCSPESHVSVPEPEHEVGLAPRPAASTEDNRKI*EDGGRGKL 223
           PTP  +P   V  PEPE  V L   P+A     R + E+   G L
Sbjct: 171 PTPRSAPAPRVMAPEPEPMVELEREPSALEAYGRDLTEEAEAGSL 215



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>WRK48_ARATH (Q9FGZ4) Probable WRKY transcription factor 48 (WRKY DNA-binding|
           protein 48)
          Length = 399

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -1

Query: 437 LSDTIKSLFXIRKLPFDKSVHEQHSEFSTTSYLSMLQLD 321
           L+  + S+F    LPF  S  E HS  +  S+L +L+ D
Sbjct: 63  LAGNLSSIFDTSSLPFPYSYFEDHSSNNPNSFLDLLRQD 101



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>WRIP1_HUMAN (Q96S55) ATPase WRNIP1 (Werner helicase-interacting protein 1)|
          Length = 665

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = -3

Query: 234 GPRSNFPLPPSSQIFRLSSVEAAGRGARPTSCSGSGTETWLSGEHGGVGGD 82
           G R+  P PP ++  RLS   A  + A PT+   S  E    GE G  GG+
Sbjct: 58  GERAKGPSPPGAKRRRLSESSALKQPATPTAAESSEGE----GEEGDDGGE 104



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>WRIP1_RAT (Q8CG07) ATPase WRNIP1 (Werner helicase-interacting protein 1)|
          Length = 660

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = -3

Query: 234 GPRSNFPLPPSSQIFRLSSVEAAGRGARPTSCSGSGTETWLSGEHGGVGGD 82
           G R+  P PP ++  RLS   A  + A PT+   S  E    GE G  GG+
Sbjct: 58  GERAKGPSPPGAKRRRLSESSALKQPATPTAAESSEGE----GEEGDDGGE 104



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>WRIP1_MOUSE (Q91XU0) ATPase WRNIP1 (Werner helicase-interacting protein 1)|
          Length = 660

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = -3

Query: 234 GPRSNFPLPPSSQIFRLSSVEAAGRGARPTSCSGSGTETWLSGEHGGVGGD 82
           G R+  P PP ++  RLS   A  + A PT+   S  E    GE G  GG+
Sbjct: 58  GERAKGPSPPGAKRRRLSESSALKQPATPTAAESSEGE----GEEGDDGGE 104



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>ZSWM5_MOUSE (Q80TC6) Zinc finger SWIM domain-containing protein 5|
          Length = 1188

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = -3

Query: 216 PLPPSSQIFRLSSVEAAGRGARPTSCSGSGTETWLSGEHGGVGGDWNRGVRYRNS 52
           P PP +     S+  AAG G+ P   +G+GT +   G  GG G  + RG+R  +S
Sbjct: 140 PPPPGAAAPAGSAPGAAGAGSSPGLGAGTGTAS--GGCGGGEGLPFRRGIRLLDS 192



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>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase (EC|
            2.7.11.1) (Aortic preferentially expressed protein 1)
            (APEG-1)
          Length = 3262

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 2    KIPCSVLTPEAQLVSXAEFL*RTPRFQSPPTPPCSPESHVSV 127
            ++P   LTP AQ++   +    T   Q P  PP  P+ H +V
Sbjct: 2241 QMPTQPLTPYAQIMQSLQLSSPTLSPQDPAVPPSEPKPHAAV 2282



 Score = 28.9 bits (63), Expect = 8.7
 Identities = 18/67 (26%), Positives = 31/67 (46%)
 Frame = +3

Query: 168 PPPQKTIERFEKMVEGGSYYEAQQMFKSTSARYITCQRYSEGLDILQSGATVQLKHGQVT 347
           PPPQ + ++   M+      E + + ++   R+    R ++  D     AT   + GQ T
Sbjct: 754 PPPQVSWKKDGSMLHS----EGRLLIRAEGERHTLLLREAQAADAGSYTATATNELGQAT 809

Query: 348 CGAELAV 368
           C + LAV
Sbjct: 810 CASSLAV 816



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>RAIN_HUMAN (Q5U651) Ras-interacting protein 1 (Rain)|
          Length = 963

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
 Frame = -3

Query: 234 GPRSNFPLPPSS---QIFRLSSVEAAG--RGARPTSCS----GSGTETWLSGEHGGVG 88
           G RS+ PLPP     ++ R+ +V+AAG   G+R    S    GSGT T  S   GG G
Sbjct: 53  GSRSSEPLPPPPPHVELRRVGAVKAAGGASGSRAKRISQLFRGSGTGTTGSSGAGGPG 110



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>FIBA1_PETMA (P02674) Fibrinogen alpha-1 chain precursor [Contains:|
           Fibrinopeptide A] (Fragment)
          Length = 966

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 10/61 (16%)
 Frame = -3

Query: 165 GRGARPTSCSGSGTE-TWLSGEH------GGVGGDWNRGVRYR---NSAXETSWASGVRT 16
           G G R    +GSG   +W +G         G GG W  G R      SA   SW +G RT
Sbjct: 689 GTGGRTEPNTGSGQGGSWSTGGRTEPNTGSGQGGSWGTGGRTEPNTGSAQGGSWGTGGRT 748

Query: 15  E 13
           E
Sbjct: 749 E 749



 Score = 28.9 bits (63), Expect = 8.7
 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 10/61 (16%)
 Frame = -3

Query: 165 GRGARPTSCSGSGTE-TWLSGEH------GGVGGDWNRGVRYR---NSAXETSWASGVRT 16
           G G R    +GSG   +W +G         G GG W  G R      SA   SW +G RT
Sbjct: 437 GTGGRTEPNTGSGQGGSWGTGGRTEPNTGSGQGGSWGTGGRTEPNTGSAQGGSWGTGGRT 496

Query: 15  E 13
           E
Sbjct: 497 E 497



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>IF2_STRAW (Q82K53) Translation initiation factor IF-2|
          Length = 1046

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +2

Query: 71  PRFQSPPTPPCSPESHVSVPEPEHEVGLAPRPAASTEDNRKI*EDGGRGKLLRG 232
           P F +PP+ P +P +  S P P    G AP+P  +    R      G+G  +RG
Sbjct: 130 PEFTAPPSAPAAPAAAASGPRPGARPG-APKPGGA----RPATPGQGQGGQVRG 178



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>ZN219_HUMAN (Q9P2Y4) Zinc finger protein 219|
          Length = 722

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = +2

Query: 26  PEAQLVSXAEFL*RTPRFQSPPTP-PCSPESHVSVPEPEHEVGLAPRPAASTE 181
           PE  L + +      P+ Q PP P P S       PEPE E    P PAA  E
Sbjct: 215 PERPLAATSAAPPPQPQPQPPPQPEPRSVPQPEPEPEPEREATPTPAPAAPEE 267



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>MK15_HUMAN (Q8TD08) Mitogen-activated protein kinase 15 (EC 2.7.11.24)|
           (Extracellular signal-regulated kinase 8)
          Length = 544

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 186 LSSVEAAGRGARPTSCSGSGTETWLSGEHGGVGGDWNRG 70
           LS V+ +GRGA P+  S +  +         + GDWNRG
Sbjct: 441 LSLVKPSGRGAAPSLTSQAAAQV---ANQALIRGDWNRG 476



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>TONB_KLEPN (P45610) Protein tonB|
          Length = 243

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +2

Query: 71  PRFQSPPTPPCSPESHVSVPEPEHEVGLAPRPAASTEDN 187
           P+ +  P P   PE  V  P+ E +    PRPA+  E+N
Sbjct: 94  PKPKPKPKPKPKPEKKVEQPKREVKPAAEPRPASPFENN 132



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>CITE2_MOUSE (O35740) Cbp/p300-interacting transactivator 2 (MSG-related protein|
           1) (MRG-1)
          Length = 269

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = -3

Query: 231 PRSNFPLPPSSQIFRLSSVEAAGRGARPTSCSGSGTETWLSGEHGGVGG 85
           P +   +  ++Q FR  + + +G  + P    GSGT     G  GG GG
Sbjct: 140 PTAGHQMNGTNQHFRDCNPKHSGGSSTPGGAGGSGTPGGSGGTSGGAGG 188



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>FGD1_MOUSE (P52734) FYVE, RhoGEF and PH domain-containing protein 1|
           (Faciogenital dysplasia 1 protein homolog) (Zinc finger
           FYVE domain-containing protein 3) (Rho/Rac guanine
           nucleotide exchange factor FGD1) (Rho/Rac GEF)
          Length = 960

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = +2

Query: 26  PEAQLVSXAEFL*RTPRFQSPPTPPCSPESHVSVPEPEHEVGLAPRPAAST 178
           P+ Q+     +L + PR   PP P   P S     +P    GL PR  AST
Sbjct: 157 PKPQVPPKPSYL-QMPRVLPPPEPIPPPPSRPLPADPRVAKGLVPRAEAST 206



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>TRIB1_HUMAN (Q96RU8) Tribbles homolog 1 (TRB-1) (SKIP1) (G-protein-coupled|
           receptor induced protein 2) (GIG-2)
          Length = 372

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 71  PRFQSPPTPPCSPESHVSVPEPEHEVGLAPRPA 169
           P + SPP  PCSP+   + P      G AP P+
Sbjct: 57  PDYLSPPGSPCSPQPPPAAPGAGGGSGSAPGPS 89



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>TOC75_ORYSA (Q84Q83) Protein TOC75, chloroplast precursor (75 kDa translocon at|
           the outer-envelope-membrane of chloroplasts)
          Length = 817

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -3

Query: 201 SQIFRLSS-VEAAGRGARPTSCSGSGTETWLSGEHGGVGGDWNRG 70
           S+ F L+S + AA  GA   + SG G      G  GG GG W  G
Sbjct: 65  SKTFALASAITAAASGAFLLASSGGGFGGGAGGPLGGGGGGWGAG 109



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>LIMD1_MOUSE (Q9QXD8) LIM domains-containing protein 1|
          Length = 668

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -3

Query: 147 TSCSGSGTETWLSGEHGGVGG 85
           T CSG   E+ +SG+ GG+GG
Sbjct: 229 TVCSGRSFESGISGQDGGIGG 249


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,278,990
Number of Sequences: 219361
Number of extensions: 1700987
Number of successful extensions: 6845
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 6111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6796
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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