Clone Name | bart08c10 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SRS1_ORYSA (P83649) Salt-stress root protein RS1 | 159 | 4e-39 | 2 | MOAA_ERWCT (Q6D3C7) Molybdenum cofactor biosynthesis protein A | 29 | 7.8 |
---|
>SRS1_ORYSA (P83649) Salt-stress root protein RS1| Length = 204 Score = 159 bits (402), Expect = 4e-39 Identities = 86/130 (66%), Positives = 93/130 (71%), Gaps = 1/130 (0%) Frame = +2 Query: 107 MTSVWKTKVLPGLSXXXXXXXXXXXXXEFLKSFNXXXXXXXXXXXXTELEPKVVETIEAS 286 MTSVWKTKVL GL+ EFLKSFN TELEPKVVE +E+S Sbjct: 1 MTSVWKTKVLTGLNKLFDKDGKKAAAAEFLKSFNKEEIGKEIDDKKTELEPKVVEVVESS 60 Query: 287 PPEIKGLIKDKKT-SXIKKNSAAVIKFLDEMAKIGFPGAKLVSDAVVKSGTTPLSPAIVF 463 PPEIK L+KDKKT S IKKN AV KFL+E+AKI FPGAK VSDAV KSGTTPLSPAI F Sbjct: 61 PPEIKALLKDKKTASKIKKNGPAVTKFLEELAKIDFPGAKPVSDAVAKSGTTPLSPAIAF 120 Query: 464 ILDKVAPFVP 493 IL+KVAPFVP Sbjct: 121 ILEKVAPFVP 130
>MOAA_ERWCT (Q6D3C7) Molybdenum cofactor biosynthesis protein A| Length = 329 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +1 Query: 94 EGEEYDERMEDQGSPRAQQVLRQGWQEGRRRR 189 EG E R G QQ+L+QGWQ+ +R R Sbjct: 198 EGGELFRRHHVSGEVIRQQLLQQGWQQQQRAR 229 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,638,104 Number of Sequences: 219361 Number of extensions: 835141 Number of successful extensions: 2945 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2906 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2944 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)