Clone Information

BLAST Search Result

Clone Name	bart08c03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)	41	0.002
2	TISB_RAT (P17431) Butyrate response factor 1 (TIS11B protein) (E...	40	0.003
3	TISB_MOUSE (P23950) Butyrate response factor 1 (TIS11B protein)	40	0.003
4	TTP_SHEEP (Q6S9E0) Tristetraproline (TTP) (Zinc finger protein 3...	40	0.003
5	TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) ...	40	0.003
6	TISB_HUMAN (Q07352) Butyrate response factor 1 (TIS11B protein) ...	40	0.004
7	ZFS1_SCHPO (P47979) Zinc-finger protein zfs1	39	0.006
8	ZFNL5_ARATH (Q5RJC5) Zinc finger CCCH type domain-containing pro...	39	0.006
9	TTP_RAT (P47973) Tristetraproline (TTP) (Zinc finger protein 36)...	39	0.008
10	TIS1_DROME (P47980) Protein TIS11 (dTIS11)	39	0.010
11	TTP_MOUSE (P22893) Tristetraproline (TTP) (Zinc finger protein 3...	38	0.013
12	ZFNL6_ARATH (Q9STM4) Putative zinc finger CCCH type domain-conta...	38	0.013
13	TTP_BOVIN (P53781) Tristetraproline (TTP) (Zinc finger protein 3...	38	0.017
14	ZFNL3_ORYSA (Q5NAV3) Zinc finger CCCH type domain-containing pro...	37	0.022
15	ZFNL3_ARATH (Q6NPN3) Zinc finger CCCH type domain-containing pro...	37	0.037
16	TTP_HUMAN (P26651) Tristetraproline (TTP) (Zinc finger protein 3...	36	0.049
17	ZFNL2_ARATH (Q9SQU4) Zinc finger CCCH type domain-containing pro...	35	0.084
18	CTH1_YEAST (P47976) Zinc finger protein CTH1	35	0.11
19	RC3H1_HUMAN (Q5TC82) Roquin (RING finger and C3H zinc finger pro...	34	0.19
20	CS007_HUMAN (Q9UPT8) Zinc finger CCCH-type domain-containing pro...	34	0.19
21	RC3H1_MOUSE (Q4VGL6) Roquin (RING finger and C3H zinc finger pro...	34	0.19
22	MNAB_MOUSE (P0C090) Membrane-associated nucleic acid binding pro...	33	0.32
23	MCP_HUMAN (P15529) Membrane cofactor protein precursor (Trophobl...	33	0.32
24	LEE1_YEAST (Q02799) Zinc finger protein LEE1	33	0.32
25	NPT2B_PONPY (Q5REV9) Sodium-dependent phosphate transport protei...	33	0.32
26	CTH2_YEAST (P47977) Zinc finger protein CTH2 (YTIS11 protein)	33	0.32
27	PIE1_CAEEL (Q94131) Pharynx and intestine in excess protein 1 (P...	33	0.32
28	NPT2B_HUMAN (O95436) Sodium-dependent phosphate transport protei...	33	0.32
29	MNAB_HUMAN (Q9HBD1) Membrane-associated nucleic acid-binding pro...	33	0.32
30	TAT_HV1S3 (P19552) TAT protein (Transactivating regulatory protein)	33	0.41
31	TAT_HV1MN (P05905) TAT protein (Transactivating regulatory protein)	33	0.41
32	TAT_HV1BR (P04610) TAT protein (Transactivating regulatory protein)	33	0.41
33	TAT_HV1B5 (P04612) TAT protein (Transactivating regulatory prote...	33	0.41
34	RC3H1_XENLA (Q6NUC6) Roquin (RING finger and C3H zinc finger pro...	33	0.54
35	ZFNL2_ORYSA (Q5JLB5) Zinc finger CCCH type domain-containing pro...	33	0.54
36	ZFNL1_ORYSA (Q5NAW2) Zinc finger CCCH type domain-containing pro...	32	0.71
37	ZC3H5_MOUSE (Q8BL48) Zinc finger CCCH-type domain-containing pro...	32	0.71
38	ZC3H5_HUMAN (Q9C0B0) Zinc finger CCCH-type domain-containing pro...	32	0.71
39	ZC3H5_CANFA (Q6EE22) Zinc finger CCCH-type domain-containing pro...	32	0.71
40	Z3H7B_HUMAN (Q9UGR2) Zinc finger CCCH-type domain-containing pro...	32	0.71
41	TAT_HV1Y2 (P35965) TAT protein (Transactivating regulatory protein)	32	0.71
42	TAT_HV1SC (P05906) TAT protein (Transactivating regulatory protein)	32	0.71
43	CS007_MOUSE (Q6ZPZ3) Zinc finger CCCH-type domain-containing pro...	32	0.71
44	MKRN3_MOUSE (Q60764) Makorin-3 (Zinc finger protein 127)	32	0.92
45	ZFNL4_ARATH (Q94AD9) Zinc finger CCCH type domain-containing pro...	32	0.92
46	TAT_HV1S1 (P19553) TAT protein (Transactivating regulatory protein)	32	0.92
47	TAT_HV1PV (P04607) TAT protein (Transactivating regulatory protein)	32	0.92
48	TAT_HV1H3 (P69698) TAT protein (Transactivating regulatory protein)	32	0.92
49	TAT_HV1H2 (P04608) TAT protein (Transactivating regulatory protein)	32	0.92
50	TAT_HV1C4 (P05907) TAT protein (Transactivating regulatory protein)	32	0.92
51	TAT_HV1B1 (P69697) TAT protein (Transactivating regulatory protein)	32	0.92
52	TAT_HV112 (P04326) TAT protein (Transactivating regulatory protein)	32	0.92
53	U3IP2_HUMAN (O43818) U3 small nucleolar RNA-interacting protein ...	32	1.2
54	MKRN4_HUMAN (Q13434) Makorin-4 (Zinc finger protein 127-Xp) (ZNF...	32	1.2
55	ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing pro...	32	1.2
56	MKRN1_MACEU (Q9TT91) Makorin-1	31	1.6
57	KRA93_HUMAN (Q9BYQ3) Keratin-associated protein 9-3 (Keratin-ass...	31	1.6
58	KRA99_HUMAN (Q9BYP9) Keratin-associated protein 9-9 (Keratin-ass...	31	2.1
59	KRA94_HUMAN (Q9BYQ2) Keratin-associated protein 9-4 (Keratin-ass...	31	2.1
60	KRA98_HUMAN (Q9BYQ0) Keratin-associated protein 9-8 (Keratin-ass...	31	2.1
61	MEX5_CAEEL (Q9XUB2) Zinc finger protein mex-5	30	2.7
62	YQC1_SCHPO (O74463) Hypothetical protein C1739.01 in chromosome III	30	2.7
63	TAT_HV1A2 (P04614) TAT protein (Transactivating regulatory protein)	30	2.7
64	NPT2B_BOVIN (Q27960) Sodium-dependent phosphate transport protei...	30	3.5
65	TAT_HV1Z6 (P04609) TAT protein (Transactivating regulatory protein)	30	3.5
66	TAT_HV1Z2 (P12506) TAT protein (Transactivating regulatory protein)	30	3.5
67	TAT_HV1RH (P05908) TAT protein (Transactivating regulatory protein)	30	3.5
68	TAT_HV1MA (P04613) TAT protein (Transactivating regulatory protein)	30	3.5
69	TAT_HV1JR (P20879) TAT protein (Transactivating regulatory protein)	30	3.5
70	ZFNL_PEA (Q9SWF9) Zinc finger CCCH type domain-containing protei...	30	4.6
71	BCOR_MOUSE (Q8CGN4) BCoR protein (BCL-6 corepressor)	30	4.6
72	ZFN1_ARATH (Q8GXX7) Zinc finger CCCH type domain-containing prot...	30	4.6
73	DHX57_MOUSE (Q6P5D3) Putative ATP-dependent RNA helicase DHX57 (...	30	4.6
74	ZFN3_ARATH (Q8L7N8) Zinc finger CCCH type domain-containing prot...	30	4.6
75	SP6_HUMAN (Q3SY56) Transcription factor Sp6 (Krueppel-like facto...	29	6.0
76	MKRN1_HUMAN (Q9UHC7) Makorin-1 (RING finger protein 61)	29	7.8
77	CY11_SOLTU (P25076) Cytochrome c1, heme protein, mitochondrial p...	29	7.8
78	MEGF8_HUMAN (Q7Z7M0) Multiple epidermal growth factor-like domai...	29	7.8
79	ZFN2_ARATH (O48772) Zinc finger CCCH type domain-containing prot...	29	7.8
80	TAT_HV1ND (P18804) TAT protein (Transactivating regulatory protein)	29	7.8
81	AROB_RHOS4 (Q3J2J0) 3-dehydroquinate synthase (EC 4.2.3.4)	29	7.8
82	RCC2_MOUSE (Q8BK67) Protein RCC2	29	7.8
83	MEGF8_MOUSE (P60882) Multiple epidermal growth factor-like domai...	29	7.8

>TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)|
          Length = 367

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 28/103 (27%), Positives = 39/103 (37%)
 Frame = +1

Query: 163 SESQQTGLSXXSKPCTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRT 342
           S SQ       ++ C  F  +  C +GE C FAH               G   + + +R 
Sbjct: 118 SGSQINSTRYKTELCRPFEESGTCKYGEKCQFAH---------------GFHELRSLTRH 162

Query: 343 PADHAASGVKTRMCTKYNTAKGCKFGDXCHFAHGERELGRPPS 471
           P        KT +C  ++T   C +G  CHF H   E    PS
Sbjct: 163 PK------YKTELCRTFHTIGFCPYGPRCHFIHNADERRPAPS 199



 Score = 36.2 bits (82), Expect = 0.049
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +1

Query: 295 KSHNLGHAAVSAPSRTPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAHGEREL 456
           +S +L H        + +   ++  KT +C  +  +  CK+G+ C FAHG  EL
Sbjct: 103 RSQHLLHLQQQQKGGSGSQINSTRYKTELCRPFEESGTCKYGEKCQFAHGFHEL 156

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>TISB_RAT (P17431) Butyrate response factor 1 (TIS11B protein) (EGF-inducible|
           protein CMG1)
          Length = 338

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 29/119 (24%), Positives = 42/119 (35%)
 Frame = +1

Query: 97  ARKRSRPESANGGAAXGKRSRESESQQTGLSXXSKPCTKFFSTIGCPFGEGCHFAHFVPG 276
           +R R R  S  G      + +    Q       ++ C  F     C +G+ C FAH +  
Sbjct: 84  SRFRDRSFSEGGERLLPTQKQPGSGQVNSSRYKTELCRPFEENGACKYGDKCQFAHGI-- 141

Query: 277 GYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAHGERE 453
                   H L         R+   H     KT +C  ++T   C +G  CHF H   E
Sbjct: 142 --------HEL---------RSLTRHPK--YKTELCRTFHTIGFCPYGPRCHFIHNAEE 181



 Score = 37.7 bits (86), Expect = 0.017
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 358 ASGVKTRMCTKYNTAKGCKFGDXCHFAHGEREL 456
           +S  KT +C  +     CK+GD C FAHG  EL
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHEL 144

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>TISB_MOUSE (P23950) Butyrate response factor 1 (TIS11B protein)|
          Length = 338

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 29/119 (24%), Positives = 42/119 (35%)
 Frame = +1

Query: 97  ARKRSRPESANGGAAXGKRSRESESQQTGLSXXSKPCTKFFSTIGCPFGEGCHFAHFVPG 276
           +R R R  S  G      + +    Q       ++ C  F     C +G+ C FAH +  
Sbjct: 84  SRFRDRSFSEGGERLLPTQKQPGSGQVNSSRYKTELCRPFEENGACKYGDKCQFAHGI-- 141

Query: 277 GYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAHGERE 453
                   H L         R+   H     KT +C  ++T   C +G  CHF H   E
Sbjct: 142 --------HEL---------RSLTRHPK--YKTELCRTFHTIGFCPYGPRCHFIHNAEE 181



 Score = 37.7 bits (86), Expect = 0.017
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 358 ASGVKTRMCTKYNTAKGCKFGDXCHFAHGEREL 456
           +S  KT +C  +     CK+GD C FAHG  EL
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHEL 144

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>TTP_SHEEP (Q6S9E0) Tristetraproline (TTP) (Zinc finger protein 36 homolog)|
           (Zfp-36)
          Length = 325

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 1/97 (1%)
 Frame = +1

Query: 205 CTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMC 384
           C  F  +  C +G  C FAH               G   +  PSR P        KT +C
Sbjct: 107 CRTFSESGRCRYGAKCQFAH---------------GLGELRQPSRHPK------YKTELC 145

Query: 385 TKYNTAKGCKFGDXCHFAHGERE-LGRPPSSYMSQES 492
            K+     C +G  CHF H   E L  P   ++ ++S
Sbjct: 146 HKFYLQGRCPYGSRCHFIHNPSEDLAAPGHPHVLRQS 182



 Score = 39.7 bits (91), Expect = 0.004
 Identities = 21/75 (28%), Positives = 36/75 (48%)
 Frame = +1

Query: 241 GEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMCTKYNTAKGCKFG 420
           G  C +    PG      +  +    + ++P+ TP    +S  KT +C  ++ +  C++G
Sbjct: 62  GRSCGWVPPPPGFAPLAPRPSSELSPSPTSPTATPT--TSSRYKTELCRTFSESGRCRYG 119

Query: 421 DXCHFAHGERELGRP 465
             C FAHG  EL +P
Sbjct: 120 AKCQFAHGLGELRQP 134

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>TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) (EGF-response|
           factor 2) (ERF-2)
          Length = 492

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 37/144 (25%), Positives = 52/144 (36%), Gaps = 7/144 (4%)
 Frame = +1

Query: 61  PPRRGGLAMDAAARK-RSRPESANGGAAXGKRSRESESQQTGLSXXSKP------CTKFF 219
           P   GG A+     K R R  S NG  +      + + +  G S  +        C  F 
Sbjct: 104 PSGGGGTALLNKENKFRDRSFSENGDRSQHLLHLQQQQKGGGGSQINSTRYKTELCRPFE 163

Query: 220 STIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMCTKYNT 399
            +  C +GE C FAH               G   + + +R P        KT +C  ++T
Sbjct: 164 ESGTCKYGEKCQFAH---------------GFHELRSLTRHPK------YKTELCRTFHT 202

Query: 400 AKGCKFGDXCHFAHGERELGRPPS 471
              C +G  CHF H   E    PS
Sbjct: 203 IGFCPYGPRCHFIHNADERRPAPS 226

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>TISB_HUMAN (Q07352) Butyrate response factor 1 (TIS11B protein) (EGF-response|
           factor 1) (ERF-1)
          Length = 338

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 29/119 (24%), Positives = 42/119 (35%)
 Frame = +1

Query: 97  ARKRSRPESANGGAAXGKRSRESESQQTGLSXXSKPCTKFFSTIGCPFGEGCHFAHFVPG 276
           +R R R  S  G      + +    Q       ++ C  F     C +G+ C FAH +  
Sbjct: 84  SRFRDRSFSEGGERLLPTQKQPGGGQVNSSRYKTELCRPFEENGACKYGDKCQFAHGI-- 141

Query: 277 GYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAHGERE 453
                   H L         R+   H     KT +C  ++T   C +G  CHF H   E
Sbjct: 142 --------HEL---------RSLTRHPK--YKTELCRTFHTIGFCPYGPRCHFIHNAEE 181



 Score = 37.7 bits (86), Expect = 0.017
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 358 ASGVKTRMCTKYNTAKGCKFGDXCHFAHGEREL 456
           +S  KT +C  +     CK+GD C FAHG  EL
Sbjct: 112 SSRYKTELCRPFEENGACKYGDKCQFAHGIHEL 144

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>ZFS1_SCHPO (P47979) Zinc-finger protein zfs1|
          Length = 404

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
 Frame = +1

Query: 265 FVP-----GGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMCTKYNTAKGCKFGDXC 429
           FVP     G ++    S +  H + S+    P    A   KT  C  +  +  C++G  C
Sbjct: 289 FVPQPSAAGDFRQAKGSASHPHGSGSSNGVAPNGKRAL-YKTEPCKNWQISGTCRYGSKC 347

Query: 430 HFAHGERELGRPP 468
            FAHG +EL  PP
Sbjct: 348 QFAHGNQELKEPP 360



 Score = 33.1 bits (74), Expect = 0.41
 Identities = 27/109 (24%), Positives = 39/109 (35%)
 Frame = +1

Query: 121 SANGGAAXGKRSRESESQQTGLSXXSKPCTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKS 300
           S+NG A  GKR+             ++PC  +  +  C +G  C FAH            
Sbjct: 314 SSNGVAPNGKRALYK----------TEPCKNWQISGTCRYGSKCQFAH------------ 351

Query: 301 HNLGHAAVSAPSRTPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAHGE 447
              G+  +  P R P        K+  C  +     C +G  C F H E
Sbjct: 352 ---GNQELKEPPRHPK------YKSERCRSFMMYGYCPYGLRCCFLHDE 391

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>ZFNL5_ARATH (Q5RJC5) Zinc finger CCCH type domain-containing protein ZFN-like 5|
          Length = 435

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 22/82 (26%), Positives = 31/82 (37%)
 Frame = +1

Query: 196 SKPCTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKT 375
           S+ C+ +  T  C +G  C F H        V +   +G   V        D      K 
Sbjct: 104 SEDCSFYMRTGSCKYGSSCKFNH-------PVRRKLQIGRERVRE-----RDEDVENPKL 151

Query: 376 RMCTKYNTAKGCKFGDXCHFAH 441
             C  Y    GCK+G+ C F+H
Sbjct: 152 MECKYYFRTGGCKYGESCRFSH 173



 Score = 38.1 bits (87), Expect = 0.013
 Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 4/83 (4%)
 Frame = +1

Query: 205 CTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTR-- 378
           C  +F T GC +GE C F+H          K HN       +P+  P +    G+  R  
Sbjct: 154 CKYYFRTGGCKYGESCRFSHM---------KEHN-------SPASVP-ELNFLGLPIRPG 196

Query: 379 --MCTKYNTAKGCKFGDXCHFAH 441
              C  Y     CKFG  C F H
Sbjct: 197 EKECPFYMRNGSCKFGSDCKFNH 219



 Score = 33.5 bits (75), Expect = 0.32
 Identities = 36/143 (25%), Positives = 50/143 (34%), Gaps = 4/143 (2%)
 Frame = +1

Query: 58  FPPRRGGLAMDAAARKRSRPESANGGAAXGKRSRESESQQTGLSXXSKPCTKFFSTIGCP 237
           +PP R  LA  +     S  E+++      + S E   ++         CT +  T  C 
Sbjct: 295 YPPERSPLAPSSYQVNNSLAETSSFSQYQHQMSVEEFPERPD----QPECTYYLKTGDCK 350

Query: 238 FGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTR----MCTKYNTAK 405
           F   C + H          K+     AA S   +        G+  R    MCT Y+   
Sbjct: 351 FKYKCKYHH---------PKNRLPKQAAFSFNDK--------GLPLRPDQSMCTHYSRYG 393

Query: 406 GCKFGDXCHFAHGERELGRPPSS 474
            CKFG  C F H       P SS
Sbjct: 394 ICKFGPACRFDHSIPPTFSPSSS 416

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>TTP_RAT (P47973) Tristetraproline (TTP) (Zinc finger protein 36) (Zfp-36)|
           (TIS11A protein) (TIS11)
          Length = 320

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = +1

Query: 325 SAPSRTPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAHGEREL 456
           ++P+ TP    +S  KT +C  Y+ +  C++G  C FAHG  EL
Sbjct: 85  TSPTATPT--TSSRYKTELCRTYSESGRCRYGAKCQFAHGPGEL 126



 Score = 35.4 bits (80), Expect = 0.084
 Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 1/97 (1%)
 Frame = +1

Query: 205 CTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMC 384
           C  +  +  C +G  C FAH               G   +   +R P        KT +C
Sbjct: 102 CRTYSESGRCRYGAKCQFAH---------------GPGELRQANRHPK------YKTELC 140

Query: 385 TKYNTAKGCKFGDXCHFAHGERE-LGRPPSSYMSQES 492
            K+     C +G  CHF H   E L  P   ++ ++S
Sbjct: 141 HKFYLQGRCPYGSRCHFIHNPTEDLALPGQPHVLRQS 177

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>TIS1_DROME (P47980) Protein TIS11 (dTIS11)|
          Length = 436

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +1

Query: 361 SGVKTRMCTKYNTAKGCKFGDXCHFAHGEREL 456
           S  KT +C  +  A  CK+G+ C FAHG  EL
Sbjct: 134 SRYKTELCRPFEEAGECKYGEKCQFAHGSHEL 165



 Score = 37.7 bits (86), Expect = 0.017
 Identities = 23/83 (27%), Positives = 29/83 (34%)
 Frame = +1

Query: 205 CTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMC 384
           C  F     C +GE C FAH           SH L +            H     KT  C
Sbjct: 141 CRPFEEAGECKYGEKCQFAH----------GSHELRNV-----------HRHPKYKTEYC 179

Query: 385 TKYNTAKGCKFGDXCHFAHGERE 453
             +++   C +G  CHF H   E
Sbjct: 180 RTFHSVGFCPYGPRCHFVHNADE 202

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>TTP_MOUSE (P22893) Tristetraproline (TTP) (Zinc finger protein 36) (Zfp-36)|
           (TIS11A protein) (TIS11) (Growth factor-inducible
           nuclear protein NUP475) (TPA-induced sequence 11)
          Length = 319

 Score = 38.1 bits (87), Expect = 0.013
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = +1

Query: 325 SAPSRTPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAHGEREL 456
           ++P+ TP    +S  KT +C  Y+ +  C++G  C FAHG  EL
Sbjct: 84  TSPTATPT--TSSRYKTELCRTYSESGRCRYGAKCQFAHGLGEL 125



 Score = 35.0 bits (79), Expect = 0.11
 Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 1/97 (1%)
 Frame = +1

Query: 205 CTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMC 384
           C  +  +  C +G  C FAH               G   +   +R P        KT +C
Sbjct: 101 CRTYSESGRCRYGAKCQFAH---------------GLGELRQANRHPK------YKTELC 139

Query: 385 TKYNTAKGCKFGDXCHFAHGERE-LGRPPSSYMSQES 492
            K+     C +G  CHF H   E L  P   ++ ++S
Sbjct: 140 HKFYLQGRCPYGSRCHFIHNPTEDLALPGQPHVLRQS 176

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>ZFNL6_ARATH (Q9STM4) Putative zinc finger CCCH type domain-containing protein|
           ZFN-like 6
          Length = 448

 Score = 38.1 bits (87), Expect = 0.013
 Identities = 28/97 (28%), Positives = 38/97 (39%)
 Frame = +1

Query: 151 RSRESESQQTGLSXXSKPCTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSA 330
           R +E +  + GL      C  +F T GC +GE C F H +P    A +   N     +  
Sbjct: 150 REKEDDGGKLGLID----CKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNF----LGL 201

Query: 331 PSRTPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAH 441
           P R P +          C  Y     CK+G  C F H
Sbjct: 202 PLR-PGEVE--------CPYYMRNGSCKYGAECKFNH 229



 Score = 37.0 bits (84), Expect = 0.029
 Identities = 31/129 (24%), Positives = 47/129 (36%), Gaps = 6/129 (4%)
 Frame = +1

Query: 73  GGLAMDAAA---RKRSRPESANGGAAXGKRSRESESQQT-GLSXXSKPCTKFFSTIGCPF 240
           GGL  +A     ++    E    G   G    E+ES+    +   ++ C+ +  T  C F
Sbjct: 68  GGLDSNAVVTINQEEEEEEEDRDGYGYGDGWSENESENVYPVRPGAEDCSFYMRTGSCKF 127

Query: 241 GEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRM--CTKYNTAKGCK 414
           G  C F H +   +Q              A      +    G K  +  C  Y    GCK
Sbjct: 128 GSSCKFNHPLARKFQI-------------ARDNKVREKEDDGGKLGLIDCKYYFRTGGCK 174

Query: 415 FGDXCHFAH 441
           +G+ C F H
Sbjct: 175 YGETCRFNH 183

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>TTP_BOVIN (P53781) Tristetraproline (TTP) (Zinc finger protein 36 homolog)|
           (Zfp-36) (TIS11A protein) (TIS11)
          Length = 324

 Score = 37.7 bits (86), Expect = 0.017
 Identities = 20/72 (27%), Positives = 34/72 (47%)
 Frame = +1

Query: 241 GEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMCTKYNTAKGCKFG 420
           G  C +    PG      +  +    + ++P+ TP    +S  KT +C  ++ +  C++G
Sbjct: 62  GRSCGWVPPPPGFAPLAPRPSSDWSPSPTSPTATPT--TSSRYKTELCRTFSESGRCRYG 119

Query: 421 DXCHFAHGEREL 456
             C FAHG  EL
Sbjct: 120 AKCQFAHGLGEL 131



 Score = 37.4 bits (85), Expect = 0.022
 Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 1/97 (1%)
 Frame = +1

Query: 205 CTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMC 384
           C  F  +  C +G  C FAH               G   +   SR P        KT +C
Sbjct: 107 CRTFSESGRCRYGAKCQFAH---------------GLGELRQASRHPK------YKTELC 145

Query: 385 TKYNTAKGCKFGDXCHFAHGERE-LGRPPSSYMSQES 492
            K+     C +G  CHF H   E L  P   ++ ++S
Sbjct: 146 HKFYLQGRCPYGSRCHFIHNPSEDLAAPGHPHVLRQS 182

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>ZFNL3_ORYSA (Q5NAV3) Zinc finger CCCH type domain-containing protein ZFN-like 3|
          Length = 466

 Score = 37.4 bits (85), Expect = 0.022
 Identities = 35/117 (29%), Positives = 46/117 (39%), Gaps = 1/117 (0%)
 Frame = +1

Query: 100 RKRSRPESANGGAAXGKRSRESESQQTGLSXXSKPCTKFFSTIG-CPFGEGCHFAHFVPG 276
           R R+     NGG   GK +  +E  +       +P  +++   G C FG  C + H   G
Sbjct: 78  RDRAAAAVLNGG---GKTTHSAEYPERP----GQPVCEYYMKNGTCKFGSNCKYDHPREG 130

Query: 277 GYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAHGE 447
             QAV  + +        P R       SG K   CT Y     CKFG  C F H E
Sbjct: 131 SVQAVMLNSS------GYPLR-------SGEKD--CTYYVKTGHCKFGSTCKFHHPE 172



 Score = 32.0 bits (71), Expect = 0.92
 Identities = 25/90 (27%), Positives = 32/90 (35%)
 Frame = +1

Query: 205 CTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMC 384
           C  +  T  C FG  C + H     Y    KS N   + +  P R  +         + C
Sbjct: 305 CQYYLKTGSCKFGSACKYHH---PQYLNTPKS-NCMLSPLGLPLRPGS---------QPC 351

Query: 385 TKYNTAKGCKFGDXCHFAHGERELGRPPSS 474
             Y     CKFG  C F H    L   PS+
Sbjct: 352 AYYTQHGFCKFGPTCKFDHPMGTLSYSPSA 381



 Score = 30.4 bits (67), Expect = 2.7
 Identities = 21/66 (31%), Positives = 23/66 (34%), Gaps = 12/66 (18%)
 Frame = +1

Query: 184 LSXXSKPCTKFFSTIGCPFGEGCHFAHFVPGGY------------QAVSKSHNLGHAAVS 327
           L    K CT +  T  C FG  C F H   GG             Q +S SH   H A  
Sbjct: 144 LRSGEKDCTYYVKTGHCKFGSTCKFHHPEIGGVSETPNMYPPVQPQPISSSHPYQHLAGW 203

Query: 328 APSRTP 345
              R P
Sbjct: 204 QMGRPP 209



 Score = 30.0 bits (66), Expect = 3.5
 Identities = 22/81 (27%), Positives = 29/81 (35%), Gaps = 2/81 (2%)
 Frame = +1

Query: 205 CTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSA--PSRTPADHAASGVKTR 378
           C  +  T  C +GE C + H  P    A +  +  G    SA  P R             
Sbjct: 57  CVYYLRTGACGYGENCRYNH--PRDRAAAAVLNGGGKTTHSAEYPERPGQP--------- 105

Query: 379 MCTKYNTAKGCKFGDXCHFAH 441
           +C  Y     CKFG  C + H
Sbjct: 106 VCEYYMKNGTCKFGSNCKYDH 126

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>ZFNL3_ARATH (Q6NPN3) Zinc finger CCCH type domain-containing protein ZFN-like 3|
          Length = 465

 Score = 36.6 bits (83), Expect = 0.037
 Identities = 34/124 (27%), Positives = 44/124 (35%), Gaps = 3/124 (2%)
 Frame = +1

Query: 109 SRPESANGGAAXGKRSRESESQQTGLSXXSKP-CTKFFSTIGCPFGEGCHFAHFVPGGYQ 285
           S P   +G ++ G  ++E    QT      +P C  F  T  C FG  C F H +     
Sbjct: 277 SAPAYQSGPSSTGVSNKE----QTFPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEAASP 332

Query: 286 AVSKSHNLGHAAVSAPSRTPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAH--GERELG 459
             S   ++G      P   P            CT +     CKFG  C F H  G   L 
Sbjct: 333 EASTLSHIG--LPLRPGAVP------------CTHFAQHGICKFGPACKFDHSLGSSSLS 378

Query: 460 RPPS 471
             PS
Sbjct: 379 YSPS 382



 Score = 33.1 bits (74), Expect = 0.41
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 199 KPCTKFFSTIGCPFGEGCHFAHFVPGGYQAVSK 297
           K C+ F  T  C FG  C + H VP G QA S+
Sbjct: 149 KECSYFMRTGQCKFGSTCRYHHPVPPGVQAPSQ 181



 Score = 32.0 bits (71), Expect = 0.92
 Identities = 25/99 (25%), Positives = 31/99 (31%), Gaps = 4/99 (4%)
 Frame = +1

Query: 205 CTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRM- 381
           C  F  T  C FG  C + H   GG                  S TP      G   R  
Sbjct: 103 CQHFMRTGTCKFGASCKYHHPRQGG---------------GGDSVTPVSLNYMGFPLRPG 147

Query: 382 ---CTKYNTAKGCKFGDXCHFAHGERELGRPPSSYMSQE 489
              C+ +     CKFG  C + H      + PS    Q+
Sbjct: 148 EKECSYFMRTGQCKFGSTCRYHHPVPPGVQAPSQQQQQQ 186

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>TTP_HUMAN (P26651) Tristetraproline (TTP) (Zinc finger protein 36 homolog)|
           (Zfp-36) (TIS11A protein) (TIS11) (Growth
           factor-inducible nuclear protein NUP475) (G0/G1 switch
           regulatory protein 24)
          Length = 326

 Score = 36.2 bits (82), Expect = 0.049
 Identities = 25/92 (27%), Positives = 32/92 (34%), Gaps = 4/92 (4%)
 Frame = +1

Query: 205 CTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMC 384
           C  F  +  C +G  C FAH               G   +   +R P        KT +C
Sbjct: 109 CRTFSESGRCRYGAKCQFAH---------------GLGELRQANRHPK------YKTELC 147

Query: 385 TKYNTAKGCKFGDXCHFAHGERE----LGRPP 468
            K+     C +G  CHF H   E     G PP
Sbjct: 148 HKFYLQGRCPYGSRCHFIHNPSEDLAAPGHPP 179



 Score = 35.0 bits (79), Expect = 0.11
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +1

Query: 325 SAPSRTPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAHGEREL 456
           S  S T      S  KT +C  ++ +  C++G  C FAHG  EL
Sbjct: 90  SPTSPTATSTTPSRYKTELCRTFSESGRCRYGAKCQFAHGLGEL 133

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>ZFNL2_ARATH (Q9SQU4) Zinc finger CCCH type domain-containing protein ZFN-like 2|
          Length = 437

 Score = 35.4 bits (80), Expect = 0.084
 Identities = 31/113 (27%), Positives = 39/113 (34%), Gaps = 4/113 (3%)
 Frame = +1

Query: 115 PESANGGAAXGKRSRESESQQTGLSXXSKP----CTKFFSTIGCPFGEGCHFAHFVPGGY 282
           P S +  A  G       S  T      +P    C  F  T  C FG  C + H V    
Sbjct: 254 PLSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKFGSSCRYHHPV---- 309

Query: 283 QAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAH 441
            AV     +  +++  P R        GV    CT +     CKFG  C F H
Sbjct: 310 DAVPPKTGIVLSSIGLPLRP-------GVA--QCTHFAQHGICKFGPACKFDH 353



 Score = 30.8 bits (68), Expect = 2.1
 Identities = 23/79 (29%), Positives = 30/79 (37%)
 Frame = +1

Query: 205 CTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMC 384
           C  F  T  C FG  C + H   GG        +L +  +  P R P +        + C
Sbjct: 81  CQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSY--LGYPLR-PGE--------KEC 129

Query: 385 TKYNTAKGCKFGDXCHFAH 441
           + Y     CKFG  C F H
Sbjct: 130 SYYLRTGQCKFGLTCRFNH 148

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>CTH1_YEAST (P47976) Zinc finger protein CTH1|
          Length = 325

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +1

Query: 328 APSRTPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAHGEREL 456
           AP + P     +  KT +C  +     CK+G+ C FAHG  EL
Sbjct: 192 APLQLPQLVNKTLYKTELCESFTIKGYCKYGNKCQFAHGLNEL 234

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>RC3H1_HUMAN (Q5TC82) Roquin (RING finger and C3H zinc finger protein 1)|
          Length = 1133

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 18/48 (37%), Positives = 21/48 (43%)
 Frame = +1

Query: 313 HAAVSAPSRTPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAHGEREL 456
           H+   A  + P  H  S  KT MC       GC  G  C FAH + EL
Sbjct: 398 HSKKGADQQQPPQH--SKYKTYMCRDMKQRGGCPRGASCTFAHSQEEL 443

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>CS007_HUMAN (Q9UPT8) Zinc finger CCCH-type domain-containing protein C19orf7|
          Length = 1303

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 27/109 (24%), Positives = 40/109 (36%), Gaps = 1/109 (0%)
 Frame = +1

Query: 118 ESANGGAAXGKRSRESESQQTGLSXXSKPCTKFFSTIGCPFGEGCHFAHFVP-GGYQAVS 294
           E    G     RSR+ +          K   K+F    C +G+ C+F+H +     + + 
Sbjct: 366 EDMGDGGGGSYRSRDHDKPHQQSDKKGKVICKYFVEGRCTWGDHCNFSHDIELPKKRELC 425

Query: 295 KSHNLGHAAVSAPSRTPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAH 441
           K +  G  A       P  H         C  Y+T   C  GD C F+H
Sbjct: 426 KFYITGFCA--RAENCPYMHG-----DFPCKLYHTTGNCINGDDCMFSH 467

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>RC3H1_MOUSE (Q4VGL6) Roquin (RING finger and C3H zinc finger protein 1)|
           (Sanroque protein)
          Length = 1130

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 18/48 (37%), Positives = 21/48 (43%)
 Frame = +1

Query: 313 HAAVSAPSRTPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAHGEREL 456
           H+   A  + P  H  S  KT MC       GC  G  C FAH + EL
Sbjct: 398 HSKKGADQQQPPQH--SKYKTYMCRDMKQRGGCPRGASCTFAHSQEEL 443

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>MNAB_MOUSE (P0C090) Membrane-associated nucleic acid binding protein|
          Length = 1187

 Score = 33.5 bits (75), Expect = 0.32
 Identities = 16/39 (41%), Positives = 17/39 (43%)
 Frame = +1

Query: 340 TPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAHGEREL 456
           TP     S  KT MC       GC  G  C FAH + EL
Sbjct: 402 TPQPQPNSKYKTSMCRDLRQQGGCPRGTNCTFAHSQEEL 440

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>MCP_HUMAN (P15529) Membrane cofactor protein precursor (Trophoblast leukocyte|
           common antigen) (TLX) (CD46 antigen)
          Length = 392

 Score = 33.5 bits (75), Expect = 0.32
 Identities = 22/73 (30%), Positives = 31/73 (42%)
 Frame = -1

Query: 338 LDGADTAAWPRLCDFDTAWYPPGTKCAK*QPSPKGHPIVLKNLVQGFDXXDRPVCCDSDS 159
           LDG+DT     +CD ++ W PP  KC K  P     P  L + V        P    S +
Sbjct: 262 LDGSDTI----VCDSNSTWDPPVPKCLKVLPPSSTKPPALSHSVSTSSTTKSPA---SSA 314

Query: 158 LERFPXAAPPLAD 120
               P   PP+++
Sbjct: 315 SGPRPTYKPPVSN 327

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>LEE1_YEAST (Q02799) Zinc finger protein LEE1|
          Length = 301

 Score = 33.5 bits (75), Expect = 0.32
 Identities = 19/56 (33%), Positives = 25/56 (44%)
 Frame = +1

Query: 130 GGAAXGKRSRESESQQTGLSXXSKPCTKFFSTIGCPFGEGCHFAHFVPGGYQAVSK 297
           G    G     S S     S  + PC K+F+   C FG  C  AH +P G++  SK
Sbjct: 99  GNCQAGSSCPFSHSPDIISSANNLPC-KYFAKGNCKFGNKCVNAHVLPNGFKMNSK 153

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>NPT2B_PONPY (Q5REV9) Sodium-dependent phosphate transport protein 2B|
           (Sodium/phosphate cotransporter 2B) (Na(+)/Pi
           cotransporter 2B) (Sodium-phosphate transport protein
           2B) (Na(+)-dependent phosphate cotransporter 2B)
           (NaPi-2b) (Solute carrier family 34
          Length = 689

 Score = 33.5 bits (75), Expect = 0.32
 Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +3

Query: 228 WVPLW*GLSLRALCPWWVPGSIKIT---QPRPCCCVCTVXNSCRSCCFWC 368
           ++PLW    +R+L PW    S K T   Q R CCC C V   CR+CC  C
Sbjct: 591 FLPLW----MRSLKPWDAVFS-KFTGCFQMR-CCCCCRV--CCRACCLLC 632

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>CTH2_YEAST (P47977) Zinc finger protein CTH2 (YTIS11 protein)|
          Length = 285

 Score = 33.5 bits (75), Expect = 0.32
 Identities = 20/81 (24%), Positives = 27/81 (33%)
 Frame = +1

Query: 205 CTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMC 384
           C  F     CP+G  C FA             H LG   V          +    +T+ C
Sbjct: 175 CESFTLKGSCPYGSKCQFA-------------HGLGELKVK--------KSCKNFRTKPC 213

Query: 385 TKYNTAKGCKFGDXCHFAHGE 447
             +     C +G  C F HG+
Sbjct: 214 VNWEKLGYCPYGRRCCFKHGD 234



 Score = 32.3 bits (72), Expect = 0.71
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 370 KTRMCTKYNTAKGCKFGDXCHFAHGEREL 456
           KT +C  +     C +G  C FAHG  EL
Sbjct: 171 KTELCESFTLKGSCPYGSKCQFAHGLGEL 199

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>PIE1_CAEEL (Q94131) Pharynx and intestine in excess protein 1 (Protein pie-1)|
          Length = 335

 Score = 33.5 bits (75), Expect = 0.32
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 370 KTRMCTKYNTAKGCKFGDXCHFAHGERELGRP 465
           KTR+C  +     C + D C +AHG+ EL  P
Sbjct: 100 KTRLCDAFRREGYCPYNDNCTYAHGQDELRVP 131

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>NPT2B_HUMAN (O95436) Sodium-dependent phosphate transport protein 2B|
           (Sodium/phosphate cotransporter 2B) (Na(+)/Pi
           cotransporter 2B) (Sodium-phosphate transport protein
           2B) (Na(+)-dependent phosphate cotransporter 2B)
           (NaPi-2b) (Solute carrier family 34
          Length = 690

 Score = 33.5 bits (75), Expect = 0.32
 Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +3

Query: 228 WVPLW*GLSLRALCPWWVPGSIKIT---QPRPCCCVCTVXNSCRSCCFWC 368
           ++PLW    +R+L PW    S K T   Q R CCC C V   CR+CC  C
Sbjct: 592 FLPLW----MRSLKPWDAVVS-KFTGCFQMR-CCCCCRV--CCRACCLLC 633

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>MNAB_HUMAN (Q9HBD1) Membrane-associated nucleic acid-binding protein (RING|
           finger protein 164)
          Length = 1191

 Score = 33.5 bits (75), Expect = 0.32
 Identities = 16/39 (41%), Positives = 17/39 (43%)
 Frame = +1

Query: 340 TPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAHGEREL 456
           TP     S  KT MC       GC  G  C FAH + EL
Sbjct: 402 TPQPQPNSKYKTSMCRDLRQQGGCPRGTNCTFAHSQEEL 440

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>TAT_HV1S3 (P19552) TAT protein (Transactivating regulatory protein)|
          Length = 101

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = +3

Query: 270 PWWVPGSIKITQPRPCCCVCTVXNSCRSCCFWCQ 371
           PW  PGS    QPR  C  C     C+ CCF CQ
Sbjct: 10  PWKHPGS----QPRTACTNCY----CKKCCFHCQ 35

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>TAT_HV1MN (P05905) TAT protein (Transactivating regulatory protein)|
          Length = 101

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +3

Query: 270 PWWVPGSIKITQPRPCCCVCTVXNSCRSCCFWCQ 371
           PW  PGS    QP+  C  C     C+ CCF CQ
Sbjct: 10  PWKHPGS----QPKTACTTCY----CKKCCFHCQ 35

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>TAT_HV1BR (P04610) TAT protein (Transactivating regulatory protein)|
          Length = 86

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +3

Query: 270 PWWVPGSIKITQPRPCCCVCTVXNSCRSCCFWCQ 371
           PW  PGS    QP+  C  C     C+ CCF CQ
Sbjct: 10  PWKHPGS----QPKTACTTCY----CKKCCFHCQ 35

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>TAT_HV1B5 (P04612) TAT protein (Transactivating regulatory protein)|
           (Fragment)
          Length = 58

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +3

Query: 270 PWWVPGSIKITQPRPCCCVCTVXNSCRSCCFWCQ 371
           PW  PGS    QP+  C  C     C+ CCF CQ
Sbjct: 10  PWKHPGS----QPKTACTTCY----CKKCCFHCQ 35

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>RC3H1_XENLA (Q6NUC6) Roquin (RING finger and C3H zinc finger protein 1)|
          Length = 1114

 Score = 32.7 bits (73), Expect = 0.54
 Identities = 17/48 (35%), Positives = 20/48 (41%)
 Frame = +1

Query: 313 HAAVSAPSRTPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAHGEREL 456
           H+      + P  H  S  KT MC       GC  G  C FAH + EL
Sbjct: 400 HSKKGTDQQQPPQH--SKYKTYMCRDMKQRGGCPRGASCTFAHSQEEL 445

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>ZFNL2_ORYSA (Q5JLB5) Zinc finger CCCH type domain-containing protein ZFN-like 2|
          Length = 439

 Score = 32.7 bits (73), Expect = 0.54
 Identities = 23/85 (27%), Positives = 28/85 (32%)
 Frame = +1

Query: 205 CTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMC 384
           CT +  T  C FG  C F H          +  NL  A+       P       +    C
Sbjct: 86  CTYYLRTGLCRFGMSCRFNH---------PQDRNLAIASARMKGEYP-----ERMGQPEC 131

Query: 385 TKYNTAKGCKFGDXCHFAHGERELG 459
             Y     CKFG  C F H   + G
Sbjct: 132 QYYLKTGTCKFGPTCKFHHPREKAG 156



 Score = 30.0 bits (66), Expect = 3.5
 Identities = 30/127 (23%), Positives = 45/127 (35%), Gaps = 1/127 (0%)
 Frame = +1

Query: 70  RGGLAMDAAARKRSRPESANGGAAXGKRSRESESQQTGLSXXSKPCTKFFSTIGCPFGEG 249
           R GL     + + + P+  N   A  +   E   +          C  +  T  C FG  
Sbjct: 91  RTGLCRFGMSCRFNHPQDRNLAIASARMKGEYPERM-----GQPECQYYLKTGTCKFGPT 145

Query: 250 CHFAH-FVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMCTKYNTAKGCKFGDX 426
           C F H     G     + + LG+     P R P++        + C  Y     CK+G+ 
Sbjct: 146 CKFHHPREKAGIAGRVQLNTLGY-----PLR-PSE--------KECAYYLKTGQCKYGNT 191

Query: 427 CHFAHGE 447
           C F H E
Sbjct: 192 CKFHHPE 198

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>ZFNL1_ORYSA (Q5NAW2) Zinc finger CCCH type domain-containing protein ZFN-like 1|
          Length = 476

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 26/106 (24%), Positives = 35/106 (33%)
 Frame = +1

Query: 130 GGAAXGKRSRESESQQTGLSXXSKPCTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNL 309
           GG   G  +R + +           C  +  T  C FG  C + H    G       +N 
Sbjct: 89  GGTEFGGGARNAAALDYPERAGQPICEYYMKTGTCKFGTNCKYHHPKQDGAVLPVMLNNS 148

Query: 310 GHAAVSAPSRTPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAHGE 447
           G      P R         +  + C+ Y     CKFG  C F H E
Sbjct: 149 GF-----PIR---------LGEKECSYYMKTGQCKFGTTCKFHHPE 180



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
 Frame = +1

Query: 205 CTKFFSTIGCPFGEGCHFAH-FVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRM 381
           C  +  T  C FG+ C + H    GG +    + N   AA+  P R             +
Sbjct: 65  CVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNA--AALDYPERAGQP---------I 113

Query: 382 CTKYNTAKGCKFGDXCHFAHGERE 453
           C  Y     CKFG  C + H +++
Sbjct: 114 CEYYMKTGTCKFGTNCKYHHPKQD 137

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>ZC3H5_MOUSE (Q8BL48) Zinc finger CCCH-type domain-containing protein 5|
          Length = 810

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 5/111 (4%)
 Frame = +1

Query: 148 KRSRESESQQTGLSXXSKP--CTKFFSTIG-CPFGEGCHFAHFVPGGYQAVSKSHNLGHA 318
           +R R S  ++ G    S    CTK+    G CP G+ C F H   G  +   + ++L + 
Sbjct: 69  QRRRRSIRRRDGTFNYSPDVYCTKYDEATGLCPEGDECPFLHRTTGDTE---RRYHLRY- 124

Query: 319 AVSAPSRTPADHAASGVKTRMCTKYNTAKG--CKFGDXCHFAHGERELGRP 465
                            KT +C     +KG   K G  C FAHG  +L  P
Sbjct: 125 ----------------YKTGICIHETDSKGNCTKNGLHCAFAHGPHDLRSP 159

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>ZC3H5_HUMAN (Q9C0B0) Zinc finger CCCH-type domain-containing protein 5|
          Length = 810

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 5/111 (4%)
 Frame = +1

Query: 148 KRSRESESQQTGLSXXSKP--CTKFFSTIG-CPFGEGCHFAHFVPGGYQAVSKSHNLGHA 318
           +R R S  ++ G    S    CTK+    G CP G+ C F H   G  +   + ++L + 
Sbjct: 69  QRRRRSIRRRDGTFNYSPDVYCTKYDEATGLCPEGDECPFLHRTTGDTE---RRYHLRY- 124

Query: 319 AVSAPSRTPADHAASGVKTRMCTKYNTAKG--CKFGDXCHFAHGERELGRP 465
                            KT +C     +KG   K G  C FAHG  +L  P
Sbjct: 125 ----------------YKTGICIHETDSKGNCTKNGLHCAFAHGPHDLRSP 159

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>ZC3H5_CANFA (Q6EE22) Zinc finger CCCH-type domain-containing protein 5|
          Length = 810

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 5/111 (4%)
 Frame = +1

Query: 148 KRSRESESQQTGLSXXSKP--CTKFFSTIG-CPFGEGCHFAHFVPGGYQAVSKSHNLGHA 318
           +R R S  ++ G    S    CTK+    G CP G+ C F H   G  +   + ++L + 
Sbjct: 69  QRRRRSIRRRDGTFNYSPDVYCTKYDEATGLCPEGDECPFLHRTTGDTE---RRYHLRY- 124

Query: 319 AVSAPSRTPADHAASGVKTRMCTKYNTAKG--CKFGDXCHFAHGERELGRP 465
                            KT +C     +KG   K G  C FAHG  +L  P
Sbjct: 125 ----------------YKTGICIHETDSKGNCTKNGLHCAFAHGPHDLRSP 159

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>Z3H7B_HUMAN (Q9UGR2) Zinc finger CCCH-type domain-containing protein 7B|
           (Rotavirus 'X'-associated non-structural protein)
           (RoXaN)
          Length = 993

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 376 RMCTKYNTAKGCKFGDXCHFAHGEREL 456
           R+C +    K C  GD C  AHG+ EL
Sbjct: 906 RLCDRLQKGKACPDGDKCRCAHGQEEL 932

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>TAT_HV1Y2 (P35965) TAT protein (Transactivating regulatory protein)|
          Length = 101

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = +3

Query: 270 PWWVPGSIKITQPRPCCCVCTVXNSCRSCCFWCQ 371
           PW  PGS    QPR  C  C     C+ CCF CQ
Sbjct: 10  PWKHPGS----QPRTACNNCY----CKKCCFHCQ 35

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>TAT_HV1SC (P05906) TAT protein (Transactivating regulatory protein)|
          Length = 101

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +3

Query: 270 PWWVPGSIKITQPRPCCCVCTVXNSCRSCCFWCQ 371
           PW  PGS    QP+  C  C     C+ CCF CQ
Sbjct: 10  PWKHPGS----QPKAACTSCY----CKKCCFHCQ 35

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>CS007_MOUSE (Q6ZPZ3) Zinc finger CCCH-type domain-containing protein C19orf7|
           homolog
          Length = 1304

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 1/109 (0%)
 Frame = +1

Query: 118 ESANGGAAXGKRSRESESQQTGLSXXSKPCTKFFSTIGCPFGEGCHFAHFVP-GGYQAVS 294
           +  +GG    +RS   +  Q       K   K+F    C +G+ C+F+H +     + + 
Sbjct: 366 DMGDGGGGSYRRSDHDKPHQQS-DKKGKVICKYFVEGRCTWGDHCNFSHDIELPKKRELC 424

Query: 295 KSHNLGHAAVSAPSRTPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAH 441
           K +  G  A +     P  H         C  Y+T   C  GD C F+H
Sbjct: 425 KFYITGFCARA--ENCPYMHGDFP-----CKLYHTTGNCINGDDCMFSH 466

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>MKRN3_MOUSE (Q60764) Makorin-3 (Zinc finger protein 127)|
          Length = 544

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +1

Query: 148 KRSRESESQQTGLSXXSKPCTKFFSTIG-CPFGEGCHFAHFVPGGYQ 285
           +  +E   QQ       K C  F   +G CPFGE C + H  P G++
Sbjct: 417 EEEKEKLVQQYKEGMSQKACRYFAGGLGHCPFGEFCFYKHEYPEGWR 463

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>ZFNL4_ARATH (Q94AD9) Zinc finger CCCH type domain-containing protein ZFN-like 4|
          Length = 404

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 31/131 (23%), Positives = 49/131 (37%), Gaps = 2/131 (1%)
 Frame = +1

Query: 55  GFPPRRGGLAMDAAARKRSRPESANGGAAXGKRSRESESQQTGLSXXS-KPCTKFFSTIG 231
           GF P +G     AA+      ++    +        + +   GLS  S +P  +FF   G
Sbjct: 215 GFLPPQGWAPYMAASNSMYNVKNQPYYSGSSASMAMAVALNRGLSESSDQPECRFFMNTG 274

Query: 232 -CPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMCTKYNTAKG 408
            C +G+ C ++H  PG   +      +    + A    PA           C  + +   
Sbjct: 275 TCKYGDDCKYSH--PGVRISQPPPSLINPFVLPARPGQPA-----------CGNFRSYGF 321

Query: 409 CKFGDXCHFAH 441
           CKFG  C F H
Sbjct: 322 CKFGPNCKFDH 332



 Score = 29.3 bits (64), Expect = 6.0
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +1

Query: 382 CTKYNTAKGCKFGDXCHFAHGERELGRPPSSYMS 483
           C  +     CK+GD C ++H    + +PP S ++
Sbjct: 267 CRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLIN 300

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>TAT_HV1S1 (P19553) TAT protein (Transactivating regulatory protein)|
          Length = 101

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +3

Query: 270 PWWVPGSIKITQPRPCCCVCTVXNSCRSCCFWCQ 371
           PW  PGS    QP+  C  C     C+ CCF CQ
Sbjct: 10  PWKHPGS----QPKTACTNCY----CKKCCFHCQ 35

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>TAT_HV1PV (P04607) TAT protein (Transactivating regulatory protein)|
          Length = 86

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +3

Query: 270 PWWVPGSIKITQPRPCCCVCTVXNSCRSCCFWCQ 371
           PW  PGS    QP+  C  C     C+ CCF CQ
Sbjct: 10  PWKHPGS----QPKTACTNCY----CKKCCFHCQ 35

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>TAT_HV1H3 (P69698) TAT protein (Transactivating regulatory protein)|
          Length = 86

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +3

Query: 270 PWWVPGSIKITQPRPCCCVCTVXNSCRSCCFWCQ 371
           PW  PGS    QP+  C  C     C+ CCF CQ
Sbjct: 10  PWKHPGS----QPKTACTNCY----CKKCCFHCQ 35

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>TAT_HV1H2 (P04608) TAT protein (Transactivating regulatory protein)|
          Length = 86

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +3

Query: 270 PWWVPGSIKITQPRPCCCVCTVXNSCRSCCFWCQ 371
           PW  PGS    QP+  C  C     C+ CCF CQ
Sbjct: 10  PWKHPGS----QPKTACTNCY----CKKCCFHCQ 35

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>TAT_HV1C4 (P05907) TAT protein (Transactivating regulatory protein)|
          Length = 101

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +3

Query: 270 PWWVPGSIKITQPRPCCCVCTVXNSCRSCCFWCQ 371
           PW  PGS    QP+  C  C     C+ CCF CQ
Sbjct: 10  PWKHPGS----QPKTACTNCY----CKKCCFHCQ 35

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>TAT_HV1B1 (P69697) TAT protein (Transactivating regulatory protein)|
          Length = 86

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +3

Query: 270 PWWVPGSIKITQPRPCCCVCTVXNSCRSCCFWCQ 371
           PW  PGS    QP+  C  C     C+ CCF CQ
Sbjct: 10  PWKHPGS----QPKTACTNCY----CKKCCFHCQ 35

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>TAT_HV112 (P04326) TAT protein (Transactivating regulatory protein)|
          Length = 86

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +3

Query: 270 PWWVPGSIKITQPRPCCCVCTVXNSCRSCCFWCQ 371
           PW  PGS    QP+  C  C     C+ CCF CQ
Sbjct: 10  PWKHPGS----QPKTACTNCY----CKKCCFHCQ 35

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>U3IP2_HUMAN (O43818) U3 small nucleolar RNA-interacting protein 2 (U3 small|
           nucleolar ribonucleoproptein-associated 55-kDa protein)
           (U3 snoRNP-associated 55-kDa protein) (U3-55K)
          Length = 475

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = +1

Query: 79  LAMDAAARKRSRPES-ANGGAAXGKRSRESES 171
           ++  AAARKR +P S A  GA  GKR R+++S
Sbjct: 1   MSATAAARKRGKPASGAGAGAGAGKRRRKADS 32

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>MKRN4_HUMAN (Q13434) Makorin-4 (Zinc finger protein 127-Xp) (ZNF127-Xp) (RING|
           finger protein 64)
          Length = 485

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = +1

Query: 148 KRSRESESQQTGLSXXSKPCTKFFSTIG-CPFGEGCHFAHFVPGGYQAVSKSHNLG 312
           K  ++   Q+   +  +K C  F    G CPFGE C + H  P G +   +   +G
Sbjct: 386 KEEKQKLIQKYKEAMSNKACKYFDEGRGSCPFGENCFYKHMYPDGRREEPQRQQVG 441

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>ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing protein ZFN-like 1|
          Length = 468

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 26/90 (28%), Positives = 32/90 (35%)
 Frame = +1

Query: 205 CTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMC 384
           C  +  T  C FG  C F H        V    N   + +  P R        GV+   C
Sbjct: 295 CQYYLKTGDCKFGTSCKFHH----PRDRVPPRANCVLSPIGLPLRP-------GVQR--C 341

Query: 385 TKYNTAKGCKFGDXCHFAHGERELGRPPSS 474
           T Y     CKFG  C F H    +   PS+
Sbjct: 342 TFYVQNGFCKFGSTCKFDHPMGTIRYNPSA 371



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 22/80 (27%), Positives = 25/80 (31%)
 Frame = +1

Query: 202 PCTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRM 381
           PC  +  T  C FG  C F H             N G +    P          G     
Sbjct: 95  PCQFYLKTGTCKFGASCKFHH-----------PKNAGGSMSHVPLNIYGYPVREG--DNE 141

Query: 382 CTKYNTAKGCKFGDXCHFAH 441
           C+ Y     CKFG  C F H
Sbjct: 142 CSYYLKTGQCKFGITCKFHH 161

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>MKRN1_MACEU (Q9TT91) Makorin-1|
          Length = 478

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = +1

Query: 148 KRSRESESQQTGLSXXSKPCTKFFSTIG-CPFGEGCHFAHFVPGGYQAVSKSHNLG 312
           K  ++   Q+   +  +KPC  F    G CPFG  C + H  P G +   +   +G
Sbjct: 347 KEEKQKLIQKYKEAMSNKPCRYFDEGRGSCPFGGNCFYKHAYPDGRREEPQRQKVG 402

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>KRA93_HUMAN (Q9BYQ3) Keratin-associated protein 9-3 (Keratin-associated protein|
           9.3) (Ultrahigh sulfur keratin-associated protein 9.3)
          Length = 159

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
 Frame = +3

Query: 276 WVPGSIKITQPRPCC-CVCTVXNSCRSCCF--WCQNT 377
           W P ++      PCC   C V + C+ CC    CQNT
Sbjct: 19  WQPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNT 55

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>KRA99_HUMAN (Q9BYP9) Keratin-associated protein 9-9 (Keratin-associated protein|
           9.9) (Ultrahigh sulfur keratin-associated protein 9.9)
          Length = 154

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
 Frame = +3

Query: 276 WVPGSIKITQPRPCC-CVCTVXNSCRSCC--FWCQNT 377
           W P ++      PCC   C V + C+ CC    CQNT
Sbjct: 24  WKPTTVTTCSSTPCCQPSCCVSSCCQPCCRPACCQNT 60

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>KRA94_HUMAN (Q9BYQ2) Keratin-associated protein 9-4 (Keratin-associated protein|
           9.4) (Ultrahigh sulfur keratin-associated protein 9.4)
          Length = 154

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
 Frame = +3

Query: 276 WVPGSIKITQPRPCC-CVCTVXNSCRSCC--FWCQNT 377
           W P ++      PCC   C V + C+ CC    CQNT
Sbjct: 24  WKPTTVTTCSSTPCCQPSCCVSSCCQPCCRPTCCQNT 60

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>KRA98_HUMAN (Q9BYQ0) Keratin-associated protein 9-8 (Keratin-associated protein|
           9.8) (Ultrahigh sulfur keratin-associated protein 9.8)
          Length = 159

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
 Frame = +3

Query: 276 WVPGSIKITQPRPCC-CVCTVXNSCRSCC--FWCQNT 377
           W P ++      PCC   C V + C+ CC    CQNT
Sbjct: 19  WKPTTVTTCSSTPCCQPSCCVSSCCQPCCRPTCCQNT 55

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>MEX5_CAEEL (Q9XUB2) Zinc finger protein mex-5|
          Length = 468

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +1

Query: 370 KTRMCTKYNTA-KGCKFGDXCHFAHGEREL 456
           KTR+C  + +  K C  G  C FAHG +EL
Sbjct: 272 KTRLCMMHASGIKPCDMGARCKFAHGLKEL 301

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>YQC1_SCHPO (O74463) Hypothetical protein C1739.01 in chromosome III|
          Length = 547

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +1

Query: 127 NGGAAXGKRSRESESQQTGLSXXSKPCTKFFSTIGCPFGEGCHFAHFVPG 276
           NG    G+    S S +T      +P  K+F    C FG  C  +H +PG
Sbjct: 52  NGTCTAGENCPFSHSLET-----ERPICKYFLKGNCKFGPKCALSHALPG 96

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>TAT_HV1A2 (P04614) TAT protein (Transactivating regulatory protein)|
          Length = 101

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = +3

Query: 270 PWWVPGSIKITQPRPCCCVCTVXNSCRSCCFWC 368
           PW  PGS    QPR  C  C     C+ CCF C
Sbjct: 10  PWKHPGS----QPRTACNNCY----CKKCCFHC 34

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>NPT2B_BOVIN (Q27960) Sodium-dependent phosphate transport protein 2B|
           (Sodium/phosphate cotransporter 2B) (Na(+)/Pi
           cotransporter 2B) (Sodium-phosphate transport protein
           2B) (Na(+)-dependent phosphate cotransporter 2B)
           (NaPi-2b) (Solute carrier family 34
          Length = 693

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = +3

Query: 228 WVPLW*GLSLRALCPW--WVPGSIKITQPRPCCCVCTVXNSCRSCCFWC 368
           ++P W    +R+L PW   +       Q R CCC C V   CR CC  C
Sbjct: 591 FLPFW----MRSLEPWDKLITSLTSCFQMR-CCCCCRV--CCRLCCGLC 632

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>TAT_HV1Z6 (P04609) TAT protein (Transactivating regulatory protein)|
          Length = 86

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 270 PWWVPGSIKITQPRPCCCVCTVXNSCRSCCFWCQ 371
           PW  PGS    QP+  C  C     C+ CC+ CQ
Sbjct: 10  PWNHPGS----QPKTACNRC----HCKKCCYHCQ 35

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>TAT_HV1Z2 (P12506) TAT protein (Transactivating regulatory protein)|
          Length = 86

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 270 PWWVPGSIKITQPRPCCCVCTVXNSCRSCCFWCQ 371
           PW  PGS    QP+  C  C     C+ CC+ CQ
Sbjct: 10  PWNHPGS----QPKTACNRC----HCKKCCYHCQ 35

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>TAT_HV1RH (P05908) TAT protein (Transactivating regulatory protein)|
          Length = 102

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 270 PWWVPGSIKITQPRPCCCVCTVXNSCRSCCFWCQ 371
           PW  PGS    QP+  C  C     C+ CC+ CQ
Sbjct: 10  PWKHPGS----QPKTACNNCY----CKKCCYHCQ 35

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>TAT_HV1MA (P04613) TAT protein (Transactivating regulatory protein)|
          Length = 87

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +3

Query: 270 PWWVPGSIKITQPRPCCCVCTVXNSCRSCCFWCQ 371
           PW  PGS    QPR  C  C     C+ CC+ CQ
Sbjct: 10  PWNHPGS----QPRTPCNKCY----CKKCCYHCQ 35

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>TAT_HV1JR (P20879) TAT protein (Transactivating regulatory protein)|
          Length = 101

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +3

Query: 261 ALCPWWVPGSIKITQPRPCCCVCTVXNSCRSCCFWCQ 371
           +L PW  PGS    QP+  C  C     C+ CC  CQ
Sbjct: 7   SLEPWKHPGS----QPKTACTNCY----CKKCCLHCQ 35

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>ZFNL_PEA (Q9SWF9) Zinc finger CCCH type domain-containing protein ZFN-like|
          Length = 417

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 27/104 (25%), Positives = 37/104 (35%), Gaps = 3/104 (2%)
 Frame = +1

Query: 157 RESESQQTGL---SXXSKPCTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVS 327
           R SE+ ++G          C+ +  T  C FG  C F H  P    A++ +   G     
Sbjct: 17  RSSETMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNH-PPNRKLAIATARMKGEF--- 72

Query: 328 APSRTPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAHGERELG 459
            P R              C  Y     CKFG  C F H + + G
Sbjct: 73  -PERLGQPE---------CQYYLKTGTCKFGATCRFHHPKDKAG 106

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>BCOR_MOUSE (Q8CGN4) BCoR protein (BCL-6 corepressor)|
          Length = 1759

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
 Frame = +1

Query: 55   GFPPRRGGLAMDAAARKRSRPESANGGAAXGKRSRESESQQTGL--------SXXSKPCT 210
            G PP +   + +A+ +K+++P          K+ +  ESQ+T +           + P  
Sbjct: 1292 GSPPMKSLSSTNASGKKQTQPSCTPASRLPAKQQKIKESQKTDVLCTGEDEDCQAASPLQ 1351

Query: 211  KFFSTIGCPFGEG-CHFAHFVP 273
            K+   I  P G+  C   H +P
Sbjct: 1352 KYTDNIEKPSGKRLCKTKHLIP 1373

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>ZFN1_ARATH (Q8GXX7) Zinc finger CCCH type domain-containing protein ZFN1|
          Length = 397

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 25/82 (30%), Positives = 31/82 (37%)
 Frame = +1

Query: 205 CTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMC 384
           C  +  T  C FG  C F H  P   QA      L  +++  P R P +         +C
Sbjct: 280 CQFYMKTGDCKFGTVCKFHH--PRDRQAPPPDCLL--SSIGLPLR-PGEP--------LC 326

Query: 385 TKYNTAKGCKFGDXCHFAHGER 450
             Y     CKFG  C F H  R
Sbjct: 327 VFYTRYGICKFGPSCKFDHPMR 348



 Score = 29.3 bits (64), Expect = 6.0
 Identities = 26/102 (25%), Positives = 37/102 (36%), Gaps = 4/102 (3%)
 Frame = +1

Query: 166 ESQQTGLSXXSKP----CTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAP 333
           E+ +TG S   +P    C+ +  T  C FG  C F             +H      V A 
Sbjct: 30  ETMETG-SYPERPGEPDCSYYIRTGLCRFGSTCRF-------------NHPRDRELVIAT 75

Query: 334 SRTPADHAASGVKTRMCTKYNTAKGCKFGDXCHFAHGERELG 459
           +R   ++    +    C  Y     CKFG  C F H   + G
Sbjct: 76  ARMRGEYPER-IGQPECEYYLKTGTCKFGVTCKFHHPRNKAG 116

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>DHX57_MOUSE (Q6P5D3) Putative ATP-dependent RNA helicase DHX57 (EC 3.6.1.-)|
           (DEAH box protein 57)
          Length = 1388

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 151 RSRESESQQTGLSXXSKPCTKFFSTIGCPFGEGCHFAHFVP 273
           +S++ ES +       + C KF+    C FG  C F H VP
Sbjct: 287 KSKQKESSKNVRDTSPETC-KFYLKGNCKFGSKCKFKHEVP 326

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>ZFN3_ARATH (Q8L7N8) Zinc finger CCCH type domain-containing protein ZFN3|
          Length = 375

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 30/103 (29%), Positives = 38/103 (36%), Gaps = 7/103 (6%)
 Frame = +1

Query: 205 CTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMC 384
           C  +  T  C FG  C F H  P   Q       L  ++V  P R P +         +C
Sbjct: 249 CQFYMKTGDCKFGTVCKFHH--PRDRQTPPPDCVL--SSVGLPLR-PGEP--------LC 295

Query: 385 TKYNTAKGCKFGDXCHFAHGER-------ELGRPPSSYMSQES 492
             Y+    CKFG  C F H  R            PSS + QE+
Sbjct: 296 VFYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSPSSSLHQET 338



 Score = 29.6 bits (65), Expect = 4.6
 Identities = 22/83 (26%), Positives = 31/83 (37%)
 Frame = +1

Query: 205 CTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMC 384
           C  +  T  C FG  C F H  P     +  S ++    +S P R   D          C
Sbjct: 93  CEFYLKTGTCKFGVTCKFHH--PRNKAGIDGSVSVN--VLSYPLRPNEDD---------C 139

Query: 385 TKYNTAKGCKFGDXCHFAHGERE 453
           + +     CKFG  C F H + +
Sbjct: 140 SYFLRIGQCKFGGTCKFNHPQTQ 162

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>SP6_HUMAN (Q3SY56) Transcription factor Sp6 (Krueppel-like factor 14)|
          Length = 376

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 9/91 (9%)
 Frame = +1

Query: 64  PRRGGLAMDAAARKRSRPESANGGAAXGKRSRESESQQTGLSXXSKPCTKFFSTIGCPFG 243
           P  G  A++ AA +    +S+  GAA  K SR S  + +G +    P       +G P G
Sbjct: 185 PPDGAKALEVAAPESQGLDSSLDGAARPKGSRRSVPRSSGQTVCRCPNCLEAERLGAPCG 244

Query: 244 ---------EGCHFAHFVPGGYQAVSKSHNL 309
                      CH    +PG  +A +K+ +L
Sbjct: 245 PDGGKKKHLHNCH----IPGCGKAYAKTSHL 271

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>MKRN1_HUMAN (Q9UHC7) Makorin-1 (RING finger protein 61)|
          Length = 482

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 28/135 (20%), Positives = 51/135 (37%), Gaps = 15/135 (11%)
 Frame = +1

Query: 88  DAAARKRSRPESANGGAAXGKRSRESESQQTGLSXXSKPCTKF-----------FSTIGC 234
           D    + S+P       A    ++ S +  + LS    P  +            F+T+G 
Sbjct: 102 DRCRYEHSKPLKQEEATATELTTKSSLAASSSLSSIVGPLVEMNTGEAESRNSNFATVGA 161

Query: 235 PFGEGCHFAHFVPG----GYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMCTKYNTA 402
              +  +   FVPG    G  A S +      +V+    +  +  A   K ++C  Y   
Sbjct: 162 GSEDWVNAIEFVPGQPYCGRTAPSCTEAPLQGSVTK-EESEKEQTAVETKKQLCP-YAAV 219

Query: 403 KGCKFGDXCHFAHGE 447
             C++G+ C + HG+
Sbjct: 220 GECRYGENCVYLHGD 234

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>CY11_SOLTU (P25076) Cytochrome c1, heme protein, mitochondrial precursor|
           (Clone PC13III)
          Length = 320

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
 Frame = +1

Query: 82  AMDAAARKRSRPESANGGAAXGKRSRESESQQTGLSXXSKPCTKFFST-IGCPFGEGCHF 258
           A +AAAR       ANGGA     S  ++++  G +      T +     G    EG H+
Sbjct: 175 ANEAAAR------FANGGAYPPDLSLITKARHNGQNYVFALLTAYRDPPAGVSIREGLHY 228

Query: 259 AHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASG 366
             + PGG  A+ K  N G  AV      PA  A  G
Sbjct: 229 NPYFPGGAIAMPKMLNDG--AVEYEDGIPATEAQMG 262

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>MEGF8_HUMAN (Q7Z7M0) Multiple epidermal growth factor-like domains 8 (EGF-like|
           domain-containing protein 4) (Multiple EGF-like domain
           protein 4)
          Length = 2386

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 6/34 (17%)
 Frame = +3

Query: 297 ITQPRPCCCVCTVXNSCRSC------CFWCQNTH 380
           +  P  C  +C+   +C  C      C WCQ+TH
Sbjct: 481 LKSPEECPPLCSQRLTCEDCLANSSQCAWCQSTH 514

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>ZFN2_ARATH (O48772) Zinc finger CCCH type domain-containing protein ZFN2|
          Length = 453

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 21/79 (26%), Positives = 28/79 (35%)
 Frame = +1

Query: 205 CTKFFSTIGCPFGEGCHFAHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVKTRMC 384
           C  F +T  C +G+ C ++H  P      S    L    + A    PA           C
Sbjct: 267 CRFFMNTGTCKYGDDCKYSH--PKERLLQSPPTLLNPIVLPARPGQPA-----------C 313

Query: 385 TKYNTAKGCKFGDXCHFAH 441
             +     CKFG  C F H
Sbjct: 314 GNFKAYGFCKFGANCKFDH 332

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>TAT_HV1ND (P18804) TAT protein (Transactivating regulatory protein)|
          Length = 86

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +3

Query: 273 WWVPGSIKITQPRPCCCVCTVXNSCRSCCFWCQ 371
           W  PGS    QPR  C  C     C+ CC+ CQ
Sbjct: 11  WNHPGS----QPRTACNKC----HCKKCCYHCQ 35

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>AROB_RHOS4 (Q3J2J0) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 370

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 30/98 (30%), Positives = 35/98 (35%)
 Frame = +1

Query: 79  LAMDAAARKRSRPESANGGAAXGKRSRESESQQTGLSXXSKPCTKFFSTIGCPFGEGCHF 258
           LA DA AR+R+   S    A    R    E  +  L+     C       G   G   H 
Sbjct: 210 LAADAEARQRAVRRSVEMKAEIVARDETEEGDRALLNLGHTFCHALEKATGYS-GRLLHG 268

Query: 259 AHFVPGGYQAVSKSHNLGHAAVSAPSRTPADHAASGVK 372
                G   A   S  LG  A  APSR  A   A G+K
Sbjct: 269 EGVAIGCALAFELSQRLGLCAQEAPSRLRAHLRAMGMK 306

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>RCC2_MOUSE (Q8BK67) Protein RCC2|
          Length = 520

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
 Frame = +1

Query: 61  PPRRGGLAMDAAARKRSRPE----SANGGAAXGKRSRESESQQTGLSXXSKPCT 210
           P RRGG     A RKR RPE    S+ GG++  +   E +    G    ++P T
Sbjct: 23  PRRRGG----PAGRKRERPERCSSSSGGGSSGDEDGPELDGAPGGGKRTARPAT 72

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>MEGF8_MOUSE (P60882) Multiple epidermal growth factor-like domains 8 (EGF-like|
           domain-containing protein 4) (Multiple EGF-like domain
           protein 4)
          Length = 2330

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 6/34 (17%)
 Frame = +3

Query: 297 ITQPRPCCCVCTVXNSCRSC------CFWCQNTH 380
           +  P  C  +C+   +C  C      C WCQ+TH
Sbjct: 481 LKNPEECPPLCSQRLTCEDCLANSSQCAWCQSTH 514


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.129    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,289,584
Number of Sequences: 219361
Number of extensions: 1405389
Number of successful extensions: 4372
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 3938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4293
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result