>SKP2_HUMAN (Q13309) S-phase kinase-associated protein 2 (F-box protein Skp2)|
           (Cyclin A/CDK2-associated protein p45) (p45skp2)
           (F-box/LRR-repeat protein 1)
          Length = 424

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = +2

Query: 65  WGGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDLS 211
           W  LPD+ LL +F  L  PE+L  +G VC+ W R+A+ E  LW+ +DL+
Sbjct: 97  WDSLPDELLLGIFSCLCLPELLKVSG-VCKRWYRLASDE-SLWQTLDLT 143

>SKP2_MOUSE (Q9Z0Z3) S-phase kinase-associated protein 2 (F-box protein Skp2)|
           (Cyclin A/CDK2-associated protein p45) (F-box/WD-40
           protein 1) (FWD1)
          Length = 424

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 21/49 (42%), Positives = 31/49 (63%)
 Frame = +2

Query: 65  WGGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDLS 211
           W  LPD+ LL +F  L  PE+L  +G VC+ W R++  E  LW+ +DL+
Sbjct: 97  WDSLPDELLLGIFSCLCLPELLRVSG-VCKRWYRLSLDE-SLWQSLDLA 143

>FXL17_MOUSE (Q9QZN1) F-box/LRR-repeat protein 17 (F-box and leucine-rich repeat|
           protein 17) (F-box only protein 13) (Fragment)
          Length = 462

 Score = 37.0 bits (84), Expect = 0.019
 Identities = 28/117 (23%), Positives = 45/117 (38%)
 Frame = +2

Query: 62  DWGGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDLSDCFDPTIDMV 241
           D   LP   LL +F  L   E  + A +VC+ W  +   +   W+++DLS          
Sbjct: 81  DINQLPPSILLKIFSNLSLNERCLSASLVCKYWRDLCL-DFQFWKQLDLSSRQQ------ 133

Query: 242 AMACAAVDRADGRLEHFAADCFVTDALLFYMAQRTNGLKSLRLVNCMKVSDKGLVAL 412
                                 VTD LL  +A R+  +  + + +C  +SD G+  L
Sbjct: 134 ----------------------VTDELLEKIASRSQNIIEINISDCRSLSDSGVCVL 168

>YKK7_CAEEL (P34284) Hypothetical F-box/LRR-repeat protein C02F5.7|
          Length = 466

 Score = 36.2 bits (82), Expect = 0.032
 Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 26/140 (18%)
 Frame = +2

Query: 74  LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDL----SDCFDPTIDMV 241
           LP + LL VF  L   + L  +  VCR+W  +A    + W+RVDL     D     ++ +
Sbjct: 60  LPKEVLLKVFSFLDT-KALCRSAQVCRSWSILALDGSN-WQRVDLFTFQRDVKTAVVENL 117

Query: 242 AMACAAVDRA----------DGRLEHFAADC------------FVTDALLFYMAQRTNGL 355
           A  C    +           D  L  F + C             VTDA    + +  + L
Sbjct: 118 ARRCGGFLKELSLKGCENVHDSALRTFTSRCPNLEHLSLYRCKRVTDASCENLGRYCHKL 177

Query: 356 KSLRLVNCMKVSDKGLVALG 415
             L L NC  ++D+ +  +G
Sbjct: 178 NYLNLENCSSITDRAMKYIG 197



 Score = 29.6 bits (65), Expect = 3.0
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +2

Query: 302 CF-VTDALLFYMAQRTNGLKSLRLVNCMKVSDKGLVALGK 418
           CF +TD  +  +A     L+ L + NC ++SD+ LV+LG+
Sbjct: 263 CFQLTDITVQNIANGATALEYLCMSNCNQISDRSLVSLGQ 302

>FBXL3_HUMAN (Q9UKT7) F-box/LRR-repeat protein 3 (F-box/LRR-repeat protein 3A)|
           (F-box and leucine-rich repeat protein 3A)
          Length = 428

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 21/45 (46%), Positives = 24/45 (53%)
 Frame = +2

Query: 62  DWGGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWR 196
           DWG L  D +L VF  L   +    A  VCRNW +V    PDLWR
Sbjct: 35  DWGNLLQDIILQVFKYLPLLD-RAHASQVCRNWNQV-FHMPDLWR 77

>FBXW5_HUMAN (Q969U6) F-box/WD-repeat protein 5 (F-box and WD-40 domain protein|
           5)
          Length = 566

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +2

Query: 62  DWGG---LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWR 196
           D GG   LPD  +  +F  LG  +VL  AG+VCR W  V+  E  LWR
Sbjct: 2   DEGGTPLLPDSLVYQIFLSLGPADVL-AAGLVCRQWQAVSRDE-FLWR 47

>FBX6_MOUSE (Q9QZN4) F-box only protein 6 (F-box only protein 6b)|
          Length = 295

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = +2

Query: 74  LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDLSDCF 220
           LP++ LL +F  + AP++L    +VCR W R       LW+R  L + F
Sbjct: 7   LPENILLELFIHIPAPQLLRNCRLVCRLW-RDLIDVVSLWKRKSLREGF 54

>JHD1_DROME (Q9VHH9) JmjC domain-containing histone demethylation protein 1 (EC|
            1.14.11.-)
          Length = 1345

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
 Frame = +2

Query: 80   DDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDLSDCFDPTIDMVAMACAA 259
            D  +L +  R    + L+    VC+ W   A  +PDLW++++ S+       M A    A
Sbjct: 1066 DPTVLKIIFRYLPQDTLVTCCSVCKVWSNAAV-DPDLWKKMNCSE-----HKMSASLLTA 1119

Query: 260  VDRADGRLEHFAAD-CFVTDALLFYMAQRTNGLKSLRLVNC 379
            + R   + EH   D   +    L ++  R   LK+L L NC
Sbjct: 1120 IVRR--QPEHLILDWTQIAKRQLAWLVARLPALKNLSLQNC 1158

>FBXL3_MOUSE (Q8C4V4) F-box/LRR-repeat protein 3 (F-box/LRR-repeat protein 3A)|
           (F-box and leucine-rich repeat protein 3A)
          Length = 428

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 21/45 (46%), Positives = 24/45 (53%)
 Frame = +2

Query: 62  DWGGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWR 196
           DWG L  D +L VF  L   +    A  VCRNW +V    PDLWR
Sbjct: 35  DWGNLLQDIVLHVFKYLPLLD-RAHASQVCRNWNQV-FHMPDLWR 77

>YB95_SCHPO (O42970) Hypothetical serine-rich protein C1E8.05 precursor|
          Length = 317

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 19/69 (27%), Positives = 29/69 (42%)
 Frame = -1

Query: 321 SASVTKQSAAKCSRRPXXXXXXXXXXXXXXMVGSKQSDRSTRRHRSGSPVATRSQLRQTT 142
           S+S +K S++  S                    S +S  S    +S S  ++ S +  TT
Sbjct: 172 SSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSSSFITSTT 231

Query: 141 PAPMSTSGA 115
           PA  S+SGA
Sbjct: 232 PASSSSSGA 240

>FBXW5_MOUSE (Q9QXW2) F-box/WD-repeat protein 5 (F-box and WD-40 domain protein|
           5)
          Length = 573

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +2

Query: 62  DWGGLP---DDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWR 196
           D GGLP   D  +  +F  LG  +VL  AG+VCR W  V+  E  LW+
Sbjct: 2   DEGGLPLLPDSLVYQIFLSLGPADVL-AAGLVCRQWQAVSRDE-FLWK 47

>FXL14_MOUSE (Q8BID8) F-box/LRR-repeat protein 14 (F-box and leucine-rich repeat|
           protein 14)
          Length = 400

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = +2

Query: 272 DGRLEHFAADCFVTDALLFYMAQRTNGLKSLRLVNCMKVSDKGL 403
           DG        C ++D  +  M ++ +GL++L +  C++++DKGL
Sbjct: 305 DGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGL 348



 Score = 29.3 bits (64), Expect = 3.9
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = +2

Query: 308 VTDALLFYMAQRTNGLKSLRLVNCMKVSDKGL 403
           V D  L Y+AQ  +GLKSL L +C  +SD G+
Sbjct: 292 VGDQSLAYIAQGLDGLKSLSLCSC-HISDDGI 322

>FXL14_HUMAN (Q8N1E6) F-box/LRR-repeat protein 14 (F-box and leucine-rich repeat|
           protein 14)
          Length = 418

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = +2

Query: 272 DGRLEHFAADCFVTDALLFYMAQRTNGLKSLRLVNCMKVSDKGL 403
           DG        C ++D  +  M ++ +GL++L +  C++++DKGL
Sbjct: 305 DGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGL 348



 Score = 29.3 bits (64), Expect = 3.9
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = +2

Query: 308 VTDALLFYMAQRTNGLKSLRLVNCMKVSDKGL 403
           V D  L Y+AQ  +GLKSL L +C  +SD G+
Sbjct: 292 VGDQSLAYIAQGLDGLKSLSLCSC-HISDDGI 322

>GRR1_YEAST (P24814) Ubiquitin ligase complex F-box protein GRR1|
          Length = 1151

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
 Frame = +2

Query: 164 RVATGEPDLWRRVDLSDC---FDPTIDMVAMACAAVDRADGRLEHFAADCF-VTDALLFY 331
           +V    P L R +DLS C    D TI+ +      V+ A      F   C  +TDA LF 
Sbjct: 567 KVVDDMPSL-RLIDLSGCENITDKTIESI------VNLAPKLRNVFLGKCSRITDASLFQ 619

Query: 332 MAQRTNGLKSLRLVNCMKVSDKGLVAL 412
           +++    L+++   +C  ++D G+ AL
Sbjct: 620 LSKLGKNLQTVHFGHCFNITDNGVRAL 646

>FBX6_RAT (Q923V4) F-box only protein 6 (F-box only protein 6b)|
           (F-box/G-domain protein 2)
          Length = 284

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +2

Query: 74  LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDLSDCF 220
           LP++ LL +F  + AP++L    +VC  W R       LW+R  L + F
Sbjct: 7   LPENILLELFTHVPAPQLLRNCRLVCSLW-RDLIDVMTLWKRKSLREGF 54

>CHSTE_MOUSE (Q80V53) Carbohydrate sulfotransferase D4ST1 (EC 2.8.2.-) (Dermatan|
           4-sulfotransferase 1) (D4ST-1)
          Length = 376

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 21/75 (28%), Positives = 31/75 (41%)
 Frame = +2

Query: 143 VVCRNWLRVATGEPDLWRRVDLSDCFDPTIDMVAMACAAVDRADGRLEHFAADCFVTDAL 322
           V C NW RV      +   VD+    D   D+V +A    +    RL+H+    FV D L
Sbjct: 157 VACSNWKRVLKVLAGILNNVDVRLKMDHRSDLVFLADLRPEEIRYRLQHYFKFLFVRDPL 216

Query: 323 LFYMAQRTNGLKSLR 367
              ++   N    +R
Sbjct: 217 ERLLSAYRNKFGEIR 231

>LEUD_PSEPK (Q88LE7) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)|
           (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
          Length = 214

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 21/62 (33%), Positives = 32/62 (51%)
 Frame = +2

Query: 185 DLWRRVDLSDCFDPTIDMVAMACAAVDRADGRLEHFAADCFVTDALLFYMAQRTNGLKSL 364
           +L+++V+ +  +  TID+ A A   V R DG++ HF  D F    LL       NGL  +
Sbjct: 137 ELFKQVEANPGYQLTIDLQAQA---VTRPDGKVLHFEIDAFRKHCLL-------NGLDDI 186

Query: 365 RL 370
            L
Sbjct: 187 GL 188

>FBX2_MOUSE (Q80UW2) F-box only protein 2|
          Length = 297

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 74  LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLW 193
           LP+  LL V   L A E++    +VC  W  +  G P LW
Sbjct: 54  LPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAP-LW 92

>FBX2_HUMAN (Q9UK22) F-box only protein 2|
          Length = 296

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 74  LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLW 193
           LP+  LL V   L A E++    +VC  W  +  G P LW
Sbjct: 50  LPEPLLLRVLAALPAAELVQACRLVCLRWKELVDGAP-LW 88

>ARK72_RAT (Q8CG45) Aflatoxin B1 aldehyde reductase member 2 (EC 1.-.-.-)|
           (rAFAR2)
          Length = 367

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = -1

Query: 189 RSGSPVATRSQLRQTTPAPMSTSGAPRRPNTV 94
           RSG  VA R      +PAP + SGAP RP TV
Sbjct: 19  RSGPSVA-RPLAMSRSPAPRAVSGAPLRPGTV 49

>ATXR3_ARATH (O23372) Probable histone-lysine N-methyltransferase ATXR3 (EC|
            2.1.1.43) (Trithorax-related protein 3) (TRX-related
            protein 3) (Protein SET DOMAIN GROUP 2)
          Length = 2351

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +2

Query: 65   WGGLPDDALLTVFGRLGAP-EVLMGAGVVCRNWLRVATGEPDLWRRVDLS 211
            WG L   AL  VF  L    + L  A + CR+W        D+ R+VDLS
Sbjct: 1130 WGLLDGHALARVFHMLRYDVKSLAFASMTCRHWKATINSYKDISRQVDLS 1179

>FXL17_HUMAN (Q9UF56) F-box/LRR-repeat protein 17 (F-box and leucine-rich repeat|
           protein 17) (F-box only protein 13) (Fragment)
          Length = 370

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 17/66 (25%), Positives = 29/66 (43%)
 Frame = +2

Query: 221 DPTIDMVAMACAAVDRADGRLEHFAADCFVTDALLFYMAQRTNGLKSLRLVNCMKVSDKG 400
           D +I  VA  C  + +      H      +TD  L  +  +   LK +    C K+SD+G
Sbjct: 96  DTSIIAVASHCPLLQKV-----HVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKISDEG 150

Query: 401 LVALGK 418
           ++ + K
Sbjct: 151 MIVIAK 156

>RHLB_XANCP (Q8P4D4) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)|
          Length = 573

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -1

Query: 219 KQSDRSTRRHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNTV 94
           +++ R  RR R+G PV     +  +TP P     APR+P  V
Sbjct: 502 ERAPRKRRRRRNGRPVEGAEPVVASTPVP--APAAPRKPTQV 541

>RHLB_XANAC (Q8PFZ3) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)|
          Length = 571

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 222 SKQSDRSTRRHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNTV 94
           ++++ R  RR R+G PV        +TP P     APR+P  V
Sbjct: 499 AERAPRKRRRRRNGRPVEGAEPALASTPVP--APAAPRKPTQV 539

>OTSB_ECOLI (P31678) Trehalose-phosphatase (EC 3.1.3.12) (Trehalose 6-phosphate|
           phosphatase) (TPP)
          Length = 266

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +2

Query: 74  LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDL 208
           L D++   V  RLG   V +G G    +W R+A G PD+W  +++
Sbjct: 200 LTDESGFAVVNRLGGMSVKIGTGATQASW-RLA-GVPDVWSWLEM 242

>VKGC_RAT (O88496) Vitamin K-dependent gamma-carboxylase (EC 6.4.-.-)|
           (Gamma-glutamyl carboxylase) (Vitamin K gamma glutamyl
           carboxylase)
          Length = 758

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +3

Query: 300 IVSSPMRCSSTWPRELMA 353
           + SSP+ CS+ WPR+L+A
Sbjct: 304 LASSPLFCSAEWPRKLVA 321

>VKGC_MOUSE (Q9QYC7) Vitamin K-dependent gamma-carboxylase (EC 6.4.-.-)|
           (Gamma-glutamyl carboxylase) (Vitamin K gamma glutamyl
           carboxylase)
          Length = 757

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +3

Query: 300 IVSSPMRCSSTWPRELMA 353
           + SSP+ CS+ WPR+L+A
Sbjct: 304 LASSPLFCSAEWPRKLVA 321

>DPOL_HHBV (P13846) P protein [Includes: DNA-directed DNA polymerase (EC|
           2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)]
          Length = 788

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
 Frame = -3

Query: 181 LAGGDAEPV-----AANDSGAHEHLRRAQAPEHCKKSIIREPA 68
           LAGGD+ P+     AA+ S  H   RR Q  +   ++I REP+
Sbjct: 275 LAGGDSTPIGPGSTAAHPSTHHVDRRRRQKGQGVLQAISREPS 317

>COMT_HUMAN (P21964) Catechol O-methyltransferase (EC 2.1.1.6)|
          Length = 271

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 19/52 (36%), Positives = 22/52 (42%)
 Frame = +2

Query: 74  LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDLSDCFDPT 229
           LPD  LL   G L    VL+   V+C        G PD    V  S CF+ T
Sbjct: 198 LPDTLLLEECGLLRKGTVLLADNVIC-------PGAPDFLAHVRGSSCFECT 242

>CHSTE_HUMAN (Q8NCH0) Carbohydrate sulfotransferase D4ST1 (EC 2.8.2.-) (Dermatan|
           4-sulfotransferase 1) (D4ST-1) (hD4ST)
          Length = 376

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 20/75 (26%), Positives = 31/75 (41%)
 Frame = +2

Query: 143 VVCRNWLRVATGEPDLWRRVDLSDCFDPTIDMVAMACAAVDRADGRLEHFAADCFVTDAL 322
           V C NW RV      +   VD+    D   D+V +A    +    RL+H+    FV + L
Sbjct: 157 VACSNWKRVMKVLAGVLDSVDVRLKMDHRSDLVFLADLRPEEIRYRLQHYFKFLFVREPL 216

Query: 323 LFYMAQRTNGLKSLR 367
              ++   N    +R
Sbjct: 217 ERLLSAYRNKFGEIR 231

>FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat|
           protein 7) (F-box protein FBL6/FBL7)
          Length = 491

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +2

Query: 308 VTDALLFYMAQRTNGLKSLRLVNCMKVSDKGLVAL 412
           +TD  + Y+A+    LKSL +  C  VSD GL  L
Sbjct: 389 ITDHGVEYLAKNCTKLKSLDIGKCPLVSDTGLECL 423



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
 Frame = +2

Query: 194 RRVDLSDCF---DPTIDMVAMACAAVDRADGRLEH-FAADCF-VTDALLFYMAQRTNGLK 358
           R +D++DCF   D  +  +A  C        +L H +   C  +TD  L Y+      +K
Sbjct: 275 RYLDMTDCFVLEDEGLHTIAAHCT-------QLTHLYLRRCVRLTDEGLRYLVIYCASIK 327

Query: 359 SLRLVNCMKVSDKGLVALGK 418
            L + +C  VSD GL  + K
Sbjct: 328 ELSVSDCRFVSDFGLREIAK 347


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,671,585
Number of Sequences: 219361
Number of extensions: 800939
Number of successful extensions: 2623
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 2521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2621
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)