>PCP2_HUMAN (Q8IVA1) Purkinje cell protein 2 homolog|
          Length = 99

 Score = 32.7 bits (73), Expect = 0.55
 Identities = 21/54 (38%), Positives = 27/54 (50%)
 Frame = +1

Query: 274 LSGQRKLSRSGPEITRKYQEDQAPRSINMDGM*SSLASTYGRDIHNGRVVSHGL 435
           + GQR   ++GP  T K Q D  P    MD +   LAST GR + + RV    L
Sbjct: 1   MEGQRCSLQAGPGQTTKSQSDPTP---EMDSLMDMLASTQGRRMDDQRVTVSSL 51

>KE4L_CAEEL (Q9XTQ7) Hypothetical Ke4-like protein H13N06.5 in chromosome X|
          Length = 462

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -2

Query: 281 PESLRSCQLAVLL*ILVIFGAGAVAGDALDEVVEHVQELGGEAGH 147
           P    + +   LL +L+ FG+G + GDA   ++ H    G   GH
Sbjct: 180 PIQANTSESGPLLKVLLAFGSGGLLGDAFLHLIPHATPAGDGHGH 224

>PNP_PSEPU (O87792) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)|
           (Polynucleotide phosphorylase) (PNPase)
          Length = 701

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 230 IFGAGAVAGDALDEVVEHVQELGGEAGHGSWCW 132
           + GA   A D    V++ V+EL  EAG  +W W
Sbjct: 202 MLGAVLFAHDEFQAVIQAVKELAAEAGKPTWDW 234

>GNTP_BACLI (P46832) Gluconate permease|
          Length = 448

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -2

Query: 239 ILVIFGAGAVAGDALDEVVEHVQE-LGGEAGH 147
           I+V FG     G  LD++V+ ++E LGG  GH
Sbjct: 29  IIVSFGVALALGMPLDDIVKTIEEGLGGTLGH 60


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,143,503
Number of Sequences: 219361
Number of extensions: 995690
Number of successful extensions: 2621
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2621
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3523384522
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)