ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart08b07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 56 4e-08
2APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 53 3e-07
3FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 39 0.007
4EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 34 0.16
5STK36_MOUSE (Q69ZM6) Serine/threonine-protein kinase 36 (EC 2.7.... 33 0.37
6HIS8_METAC (Q8TUE9) Histidinol-phosphate aminotransferase (EC 2.... 30 3.1
7IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2 29 5.3
8BUR1_CANGA (Q6FQ83) Serine/threonine-protein kinase BUR1 (EC 2.7... 28 6.9
9HIS8_METMA (Q8PX17) Histidinol-phosphate aminotransferase (EC 2.... 28 6.9
10LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglyc... 28 9.0
11SPT5H_BRARE (Q9DDT5) Transcription elongation factor SPT5 (DRB s... 28 9.0

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 55.8 bits (133), Expect = 4e-08
 Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
 Frame = +1

Query: 166 RLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLP-GRPTGRFTNGYXLADVTSQRL 342
           + + AV+ FGDS+ D GNN+ L        RPYGMD P G  TGRF+NG   +D  S+ L
Sbjct: 121 KTIPAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYL 180

Query: 343 G 345
           G
Sbjct: 181 G 181



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 52.8 bits (125), Expect = 3e-07
 Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
 Frame = +1

Query: 166 RLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLPGR-PTGRFTNGYXLADVTSQRL 342
           + + AV+ FGDS+ D GNN+ L        RPYGMD   R  TGRF+NG   +D  ++ +
Sbjct: 200 KTIPAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYM 259

Query: 343 GFEMSPKPYL--SMLPHDXI 396
           G +     YL   + P+D +
Sbjct: 260 GVKEIVPAYLDPKIQPNDLL 279



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 24/66 (36%), Positives = 33/66 (50%)
 Frame = +1

Query: 178 AVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNGYXLADVTSQRLGFEMS 357
           A++ FGDS  D G    L A   +A  P+G    G P GR+ +G  + D  ++ LG    
Sbjct: 30  AIFNFGDSNSDTGG---LSAAFGQAGPPHGSSFFGSPAGRYCDGRLVIDFIAESLGL--- 83

Query: 358 PKPYLS 375
             PYLS
Sbjct: 84  --PYLS 87



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>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 23/68 (33%), Positives = 31/68 (45%)
 Frame = +1

Query: 178 AVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNGYXLADVTSQRLGFEMS 357
           A++ FGDS  D G       P    N PYG     R TGR+++G  + D  ++       
Sbjct: 34  AIFNFGDSNSDTGGKAAAFYPL---NPPYGETFFHRSTGRYSDGRLIIDFIAESFNLPYL 90

Query: 358 PKPYLSML 381
             PYLS L
Sbjct: 91  -SPYLSSL 97



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>STK36_MOUSE (Q69ZM6) Serine/threonine-protein kinase 36 (EC 2.7.11.1) (Fused|
           homolog)
          Length = 1268

 Score = 32.7 bits (73), Expect = 0.37
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +2

Query: 23  PLPLASYHSHSESLQQRPWRGALL 94
           PL L  Y   S S+QQ+PW GALL
Sbjct: 470 PLSLLRYSQESSSIQQQPWYGALL 493



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>HIS8_METAC (Q8TUE9) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 367

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 22/73 (30%), Positives = 35/73 (47%)
 Frame = +1

Query: 199 SLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNGYXLADVTSQRLGFEMSPKPYLSM 378
           S++ +G+N+    P+P+A R      PG       +   L +V S+  GF +S     S 
Sbjct: 39  SIIKLGSNENPLGPSPKAVRALVETAPGANIYPSADARELREVLSKYTGFPVS-NIVASG 97

Query: 379 LPHDXILLGLCKI 417
              D +L GLC+I
Sbjct: 98  PGMDGLLDGLCRI 110



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>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2|
          Length = 969

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = +1

Query: 211 VGNNDYLPAPAPRANRPYGMDLPGRP 288
           VGNN Y   PAP   RP     PG P
Sbjct: 178 VGNNPYSSQPAPERERPAARPGPGGP 203



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>BUR1_CANGA (Q6FQ83) Serine/threonine-protein kinase BUR1 (EC 2.7.11.22) (EC|
           2.7.11.23)
          Length = 667

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 12/64 (18%)
 Frame = +1

Query: 220 NDYLPAPAPRANRPYGMDLP-----GRPTGRFTNGYXLADVTSQRLGFEMSP-------K 363
           N  +P P P+ANR  G  LP     GR  G   +G     +T   +G   +P       K
Sbjct: 464 NPSVPHPQPKANRYGGSSLPSGPKYGRYEGNNHSGSLRNRITPSNMGTHSNPRAENMGSK 523

Query: 364 PYLS 375
           PY S
Sbjct: 524 PYQS 527



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>HIS8_METMA (Q8PX17) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 368

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 20/74 (27%), Positives = 36/74 (48%)
 Frame = +1

Query: 196 DSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNGYXLADVTSQRLGFEMSPKPYLS 375
           +S++ +G+N+    P+P+A +      PG       + + L +  S+  GF +S     S
Sbjct: 39  ESIIKLGSNENPLGPSPKAVKALIEAAPGANIYPSADAHELREALSKYTGFPVS-NIVAS 97

Query: 376 MLPHDXILLGLCKI 417
               D +L GLC+I
Sbjct: 98  GPGMDGLLDGLCRI 111



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>LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)|
          Length = 645

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +1

Query: 175 NAVYVFGDSLVDVGNN 222
           N +YVFGDSL D GNN
Sbjct: 26  NNLYVFGDSLSDGGNN 41



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>SPT5H_BRARE (Q9DDT5) Transcription elongation factor SPT5 (DRB|
            sensitivity-inducing factor large subunit) (DSIF large
            subunit) (Protein foggy)
          Length = 1084

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = +1

Query: 226  YLPAPAPRANRPYGMDLPGRPTGRFTNGYXLADVTSQRLGFEMSPKP 366
            Y   P+P+ N  Y    PG P    T+ Y      S +  ++ SP P
Sbjct: 860  YPEVPSPQVNPQYNPQTPGTPAMYNTDQYSPYAAPSPQGSYQPSPSP 906


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,016,288
Number of Sequences: 219361
Number of extensions: 603840
Number of successful extensions: 1791
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1789
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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