Clone Name | bart08b07 |
---|---|
Clone Library Name | barley_pub |
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 55.8 bits (133), Expect = 4e-08 Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Frame = +1 Query: 166 RLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLP-GRPTGRFTNGYXLADVTSQRL 342 + + AV+ FGDS+ D GNN+ L RPYGMD P G TGRF+NG +D S+ L Sbjct: 121 KTIPAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYL 180 Query: 343 G 345 G Sbjct: 181 G 181
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 52.8 bits (125), Expect = 3e-07 Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 3/80 (3%) Frame = +1 Query: 166 RLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLPGR-PTGRFTNGYXLADVTSQRL 342 + + AV+ FGDS+ D GNN+ L RPYGMD R TGRF+NG +D ++ + Sbjct: 200 KTIPAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYM 259 Query: 343 GFEMSPKPYL--SMLPHDXI 396 G + YL + P+D + Sbjct: 260 GVKEIVPAYLDPKIQPNDLL 279
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 38.5 bits (88), Expect = 0.007 Identities = 24/66 (36%), Positives = 33/66 (50%) Frame = +1 Query: 178 AVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNGYXLADVTSQRLGFEMS 357 A++ FGDS D G L A +A P+G G P GR+ +G + D ++ LG Sbjct: 30 AIFNFGDSNSDTGG---LSAAFGQAGPPHGSSFFGSPAGRYCDGRLVIDFIAESLGL--- 83 Query: 358 PKPYLS 375 PYLS Sbjct: 84 --PYLS 87
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 33.9 bits (76), Expect = 0.16 Identities = 23/68 (33%), Positives = 31/68 (45%) Frame = +1 Query: 178 AVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNGYXLADVTSQRLGFEMS 357 A++ FGDS D G P N PYG R TGR+++G + D ++ Sbjct: 34 AIFNFGDSNSDTGGKAAAFYPL---NPPYGETFFHRSTGRYSDGRLIIDFIAESFNLPYL 90 Query: 358 PKPYLSML 381 PYLS L Sbjct: 91 -SPYLSSL 97
>STK36_MOUSE (Q69ZM6) Serine/threonine-protein kinase 36 (EC 2.7.11.1) (Fused| homolog) Length = 1268 Score = 32.7 bits (73), Expect = 0.37 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = +2 Query: 23 PLPLASYHSHSESLQQRPWRGALL 94 PL L Y S S+QQ+PW GALL Sbjct: 470 PLSLLRYSQESSSIQQQPWYGALL 493
>HIS8_METAC (Q8TUE9) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 367 Score = 29.6 bits (65), Expect = 3.1 Identities = 22/73 (30%), Positives = 35/73 (47%) Frame = +1 Query: 199 SLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNGYXLADVTSQRLGFEMSPKPYLSM 378 S++ +G+N+ P+P+A R PG + L +V S+ GF +S S Sbjct: 39 SIIKLGSNENPLGPSPKAVRALVETAPGANIYPSADARELREVLSKYTGFPVS-NIVASG 97 Query: 379 LPHDXILLGLCKI 417 D +L GLC+I Sbjct: 98 PGMDGLLDGLCRI 110
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 28.9 bits (63), Expect = 5.3 Identities = 13/26 (50%), Positives = 13/26 (50%) Frame = +1 Query: 211 VGNNDYLPAPAPRANRPYGMDLPGRP 288 VGNN Y PAP RP PG P Sbjct: 178 VGNNPYSSQPAPERERPAARPGPGGP 203
>BUR1_CANGA (Q6FQ83) Serine/threonine-protein kinase BUR1 (EC 2.7.11.22) (EC| 2.7.11.23) Length = 667 Score = 28.5 bits (62), Expect = 6.9 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 12/64 (18%) Frame = +1 Query: 220 NDYLPAPAPRANRPYGMDLP-----GRPTGRFTNGYXLADVTSQRLGFEMSP-------K 363 N +P P P+ANR G LP GR G +G +T +G +P K Sbjct: 464 NPSVPHPQPKANRYGGSSLPSGPKYGRYEGNNHSGSLRNRITPSNMGTHSNPRAENMGSK 523 Query: 364 PYLS 375 PY S Sbjct: 524 PYQS 527
>HIS8_METMA (Q8PX17) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 368 Score = 28.5 bits (62), Expect = 6.9 Identities = 20/74 (27%), Positives = 36/74 (48%) Frame = +1 Query: 196 DSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNGYXLADVTSQRLGFEMSPKPYLS 375 +S++ +G+N+ P+P+A + PG + + L + S+ GF +S S Sbjct: 39 ESIIKLGSNENPLGPSPKAVKALIEAAPGANIYPSADAHELREALSKYTGFPVS-NIVAS 97 Query: 376 MLPHDXILLGLCKI 417 D +L GLC+I Sbjct: 98 GPGMDGLLDGLCRI 111
>LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 645 Score = 28.1 bits (61), Expect = 9.0 Identities = 12/16 (75%), Positives = 13/16 (81%) Frame = +1 Query: 175 NAVYVFGDSLVDVGNN 222 N +YVFGDSL D GNN Sbjct: 26 NNLYVFGDSLSDGGNN 41
>SPT5H_BRARE (Q9DDT5) Transcription elongation factor SPT5 (DRB| sensitivity-inducing factor large subunit) (DSIF large subunit) (Protein foggy) Length = 1084 Score = 28.1 bits (61), Expect = 9.0 Identities = 14/47 (29%), Positives = 20/47 (42%) Frame = +1 Query: 226 YLPAPAPRANRPYGMDLPGRPTGRFTNGYXLADVTSQRLGFEMSPKP 366 Y P+P+ N Y PG P T+ Y S + ++ SP P Sbjct: 860 YPEVPSPQVNPQYNPQTPGTPAMYNTDQYSPYAAPSPQGSYQPSPSP 906 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,016,288 Number of Sequences: 219361 Number of extensions: 603840 Number of successful extensions: 1791 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1727 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1789 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)