ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart08b06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY093953.1| Triticum aestivum biostress-resistance-related protein mRNA, partial cds Length = 1265 Score = 646 bits (326), Expect = 0.0 Identities = 369/384 (96%) Strand = Plus / Plus Query: 135 aggccattggattcgtggcgttggcgagcgtggtcgccagcaggagaggagggacggcgg 194 |||||||||||||||||||||||||||||||||||||||| || |||| | | |||||| Sbjct: 127 aggccattggattcgtggcgttggcgagcgtggtcgccaggagaggaggggtgccggcgg 186 Query: 195 cggcggcgactgttcgcgggatgagcttcggcggcgccagctccgtcgcggccggtgcga 254 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 187 cggcggcgactgttcgcgggatgagcttcggcggcgccagctccgttgcggccggtggga 246 Query: 255 agcggccgttcgagtacgggaggacgcatgtggtgaggcccaagggggcgcacaaggcca 314 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 247 agcggccgttcgagtacgggaggacgcatgtggtgaggcccaagggcgcgcacaaggcca 306 Query: 315 ccatcgtctggcttcacggcctcggcgacnatggagccagctggtctcaactgttggaaa 374 ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 307 ccatcgtctggctccacggcctcggcgacaatggagccagctggtctcaactgttggaaa 366 Query: 375 ctcttccccttcctaatataanatggatttgcccaactgcacctacgaggcccgtggcaa 434 ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||| Sbjct: 367 ctcttccccttcctaatataaaatggatctgcccaactgcacctacgaggcctgtggcaa 426 Query: 435 tttttggtggattcccatctactgcatggtttgacgttgctgatctttcagaagattctc 494 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 427 tttttggtggattcccatctactgcatggtttgatgttgctgatctttcagaagattctc 486 Query: 495 ctgatgatgttgaggggctggatt 518 |||||||||||||||||||||||| Sbjct: 487 ctgatgatgttgaggggctggatt 510
>ref|XM_550302.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1184 Score = 353 bits (178), Expect = 4e-94 Identities = 302/342 (88%), Gaps = 9/342 (2%) Strand = Plus / Plus Query: 182 ggagggacggcggcggcggcgactgttcgcgggatgagc---ttcggcggcgccagctcc 238 |||||| ||||||||||||||| |||||||||||||||| ||||||||| |||||||| Sbjct: 152 ggaggggcggcggcggcggcgattgttcgcgggatgagcagcttcggcggcaccagctcc 211 Query: 239 gtcgcggccggtgc---gaagcggccgttcgagtacgggaggacgcatgtggtgaggccc 295 ||||| |||||| |||| ||| ||||||||||| |||||||||| ||||||||| Sbjct: 212 gtcgcctccggtggtgggaagaggc---tcgagtacgggcggacgcatgtcgtgaggccc 268 Query: 296 aagggggcgcacaaggccaccatcgtctggcttcacggcctcggcgacnatggagccagc 355 ||||| |||||||||||||||||||||||||| ||||||||||| ||| | ||||||||| Sbjct: 269 aagggcgcgcacaaggccaccatcgtctggctccacggcctcggggacaacggagccagc 328 Query: 356 tggtctcaactgttggaaactcttccccttcctaatataanatggatttgcccaactgca 415 ||||||||||| ||||||| ||||||||||| ||||||| |||||||||||| || || Sbjct: 329 tggtctcaactactggaaacccttccccttcccaatataaaatggatttgccccaccgcg 388 Query: 416 cctacgaggcccgtggcaatttttggtggattcccatctactgcatggtttgacgttgct 475 ||||| ||||| |||||| |||||||||| |||||||| |||||||||||||| |||||| Sbjct: 389 cctacaaggccagtggcagtttttggtgggttcccatcaactgcatggtttgatgttgct 448 Query: 476 gatctttcagaagattctcctgatgatgttgaggggctggat 517 |||||||||||||| |||||||||||||||||||| ||||| Sbjct: 449 gatctttcagaagacgctcctgatgatgttgaggggttggat 490
>ref|NM_191595.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1285 Score = 353 bits (178), Expect = 4e-94 Identities = 302/342 (88%), Gaps = 9/342 (2%) Strand = Plus / Plus Query: 182 ggagggacggcggcggcggcgactgttcgcgggatgagc---ttcggcggcgccagctcc 238 |||||| ||||||||||||||| |||||||||||||||| ||||||||| |||||||| Sbjct: 126 ggaggggcggcggcggcggcgattgttcgcgggatgagcagcttcggcggcaccagctcc 185 Query: 239 gtcgcggccggtgc---gaagcggccgttcgagtacgggaggacgcatgtggtgaggccc 295 ||||| |||||| |||| ||| ||||||||||| |||||||||| ||||||||| Sbjct: 186 gtcgcctccggtggtgggaagaggc---tcgagtacgggcggacgcatgtcgtgaggccc 242 Query: 296 aagggggcgcacaaggccaccatcgtctggcttcacggcctcggcgacnatggagccagc 355 ||||| |||||||||||||||||||||||||| ||||||||||| ||| | ||||||||| Sbjct: 243 aagggcgcgcacaaggccaccatcgtctggctccacggcctcggggacaacggagccagc 302 Query: 356 tggtctcaactgttggaaactcttccccttcctaatataanatggatttgcccaactgca 415 ||||||||||| ||||||| ||||||||||| ||||||| |||||||||||| || || Sbjct: 303 tggtctcaactactggaaacccttccccttcccaatataaaatggatttgccccaccgcg 362 Query: 416 cctacgaggcccgtggcaatttttggtggattcccatctactgcatggtttgacgttgct 475 ||||| ||||| |||||| |||||||||| |||||||| |||||||||||||| |||||| Sbjct: 363 cctacaaggccagtggcagtttttggtgggttcccatcaactgcatggtttgatgttgct 422 Query: 476 gatctttcagaagattctcctgatgatgttgaggggctggat 517 |||||||||||||| |||||||||||||||||||| ||||| Sbjct: 423 gatctttcagaagacgctcctgatgatgttgaggggttggat 464
>dbj|AK106131.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F11, full insert sequence Length = 1200 Score = 353 bits (178), Expect = 4e-94 Identities = 302/342 (88%), Gaps = 9/342 (2%) Strand = Plus / Plus Query: 182 ggagggacggcggcggcggcgactgttcgcgggatgagc---ttcggcggcgccagctcc 238 |||||| ||||||||||||||| |||||||||||||||| ||||||||| |||||||| Sbjct: 152 ggaggggcggcggcggcggcgattgttcgcgggatgagcagcttcggcggcaccagctcc 211 Query: 239 gtcgcggccggtgc---gaagcggccgttcgagtacgggaggacgcatgtggtgaggccc 295 ||||| |||||| |||| ||| ||||||||||| |||||||||| ||||||||| Sbjct: 212 gtcgcctccggtggtgggaagaggc---tcgagtacgggcggacgcatgtcgtgaggccc 268 Query: 296 aagggggcgcacaaggccaccatcgtctggcttcacggcctcggcgacnatggagccagc 355 ||||| |||||||||||||||||||||||||| ||||||||||| ||| | ||||||||| Sbjct: 269 aagggcgcgcacaaggccaccatcgtctggctccacggcctcggggacaacggagccagc 328 Query: 356 tggtctcaactgttggaaactcttccccttcctaatataanatggatttgcccaactgca 415 ||||||||||| ||||||| ||||||||||| ||||||| |||||||||||| || || Sbjct: 329 tggtctcaactactggaaacccttccccttcccaatataaaatggatttgccccaccgcg 388 Query: 416 cctacgaggcccgtggcaatttttggtggattcccatctactgcatggtttgacgttgct 475 ||||| ||||| |||||| |||||||||| |||||||| |||||||||||||| |||||| Sbjct: 389 cctacaaggccagtggcagtttttggtgggttcccatcaactgcatggtttgatgttgct 448 Query: 476 gatctttcagaagattctcctgatgatgttgaggggctggat 517 |||||||||||||| |||||||||||||||||||| ||||| Sbjct: 449 gatctttcagaagacgctcctgatgatgttgaggggttggat 490
>dbj|AK101698.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060D21, full insert sequence Length = 1453 Score = 353 bits (178), Expect = 4e-94 Identities = 302/342 (88%), Gaps = 9/342 (2%) Strand = Plus / Plus Query: 182 ggagggacggcggcggcggcgactgttcgcgggatgagc---ttcggcggcgccagctcc 238 |||||| ||||||||||||||| |||||||||||||||| ||||||||| |||||||| Sbjct: 293 ggaggggcggcggcggcggcgattgttcgcgggatgagcagcttcggcggcaccagctcc 352 Query: 239 gtcgcggccggtgc---gaagcggccgttcgagtacgggaggacgcatgtggtgaggccc 295 ||||| |||||| |||| ||| ||||||||||| |||||||||| ||||||||| Sbjct: 353 gtcgcctccggtggtgggaagaggc---tcgagtacgggcggacgcatgtcgtgaggccc 409 Query: 296 aagggggcgcacaaggccaccatcgtctggcttcacggcctcggcgacnatggagccagc 355 ||||| |||||||||||||||||||||||||| ||||||||||| ||| | ||||||||| Sbjct: 410 aagggcgcgcacaaggccaccatcgtctggctccacggcctcggggacaacggagccagc 469 Query: 356 tggtctcaactgttggaaactcttccccttcctaatataanatggatttgcccaactgca 415 ||||||||||| ||||||| ||||||||||| ||||||| |||||||||||| || || Sbjct: 470 tggtctcaactactggaaacccttccccttcccaatataaaatggatttgccccaccgcg 529 Query: 416 cctacgaggcccgtggcaatttttggtggattcccatctactgcatggtttgacgttgct 475 ||||| ||||| |||||| |||||||||| |||||||| |||||||||||||| |||||| Sbjct: 530 cctacaaggccagtggcagtttttggtgggttcccatcaactgcatggtttgatgttgct 589 Query: 476 gatctttcagaagattctcctgatgatgttgaggggctggat 517 |||||||||||||| |||||||||||||||||||| ||||| Sbjct: 590 gatctttcagaagacgctcctgatgatgttgaggggttggat 631 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 17 gaaaagacgctcccctttccgccgcccaaatcc 49 |||||| |||||||||||||||||||||||||| Sbjct: 140 gaaaagtcgctcccctttccgccgcccaaatcc 172
>dbj|AK061797.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G08, full insert sequence Length = 1285 Score = 353 bits (178), Expect = 4e-94 Identities = 302/342 (88%), Gaps = 9/342 (2%) Strand = Plus / Plus Query: 182 ggagggacggcggcggcggcgactgttcgcgggatgagc---ttcggcggcgccagctcc 238 |||||| ||||||||||||||| |||||||||||||||| ||||||||| |||||||| Sbjct: 126 ggaggggcggcggcggcggcgattgttcgcgggatgagcagcttcggcggcaccagctcc 185 Query: 239 gtcgcggccggtgc---gaagcggccgttcgagtacgggaggacgcatgtggtgaggccc 295 ||||| |||||| |||| ||| ||||||||||| |||||||||| ||||||||| Sbjct: 186 gtcgcctccggtggtgggaagaggc---tcgagtacgggcggacgcatgtcgtgaggccc 242 Query: 296 aagggggcgcacaaggccaccatcgtctggcttcacggcctcggcgacnatggagccagc 355 ||||| |||||||||||||||||||||||||| ||||||||||| ||| | ||||||||| Sbjct: 243 aagggcgcgcacaaggccaccatcgtctggctccacggcctcggggacaacggagccagc 302 Query: 356 tggtctcaactgttggaaactcttccccttcctaatataanatggatttgcccaactgca 415 ||||||||||| ||||||| ||||||||||| ||||||| |||||||||||| || || Sbjct: 303 tggtctcaactactggaaacccttccccttcccaatataaaatggatttgccccaccgcg 362 Query: 416 cctacgaggcccgtggcaatttttggtggattcccatctactgcatggtttgacgttgct 475 ||||| ||||| |||||| |||||||||| |||||||| |||||||||||||| |||||| Sbjct: 363 cctacaaggccagtggcagtttttggtgggttcccatcaactgcatggtttgatgttgct 422 Query: 476 gatctttcagaagattctcctgatgatgttgaggggctggat 517 |||||||||||||| |||||||||||||||||||| ||||| Sbjct: 423 gatctttcagaagacgctcctgatgatgttgaggggttggat 464
>gb|AY109240.1| Zea mays PCO097762 mRNA sequence Length = 1400 Score = 311 bits (157), Expect = 1e-81 Identities = 272/311 (87%) Strand = Plus / Plus Query: 200 gcgactgttcgcgggatgagcttcggcggcgccagctccgtcgcggccggtgcgaagcgg 259 |||||||||||||||||||||||||||||| ||||||| |||| | ||||||||| || Sbjct: 318 gcgactgttcgcgggatgagcttcggcggcagcagctccctcgcatcaggtgcgaagagg 377 Query: 260 ccgttcgagtacgggaggacgcatgtggtgaggcccaagggggcgcacaaggccaccatc 319 ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 378 ccgttcgagtacgggagaacgcatgtggtgaggcccaagggcacgcacaaggccaccatt 437 Query: 320 gtctggcttcacggcctcggcgacnatggagccagctggtctcaactgttggaaactctt 379 |||||||| || || || || ||| |||||||||||||||||||||| ||||||||||| Sbjct: 438 gtctggctccatggacttggggacaatggagccagctggtctcaactactggaaactctt 497 Query: 380 ccccttcctaatataanatggatttgcccaactgcacctacgaggcccgtggcaattttt 439 |||||||||||||||| |||||| ||||| ||||||||| | || |||||| || | ||| Sbjct: 498 ccccttcctaatataaaatggatatgccccactgcaccttcaagacccgtgtcagtgttt 557 Query: 440 ggtggattcccatctactgcatggtttgacgttgctgatctttcagaagattctcctgat 499 || || ||||| || || ||||||||||| |||||||||||||| || ||| |||||||| Sbjct: 558 ggcgggttcccctccacagcatggtttgatgttgctgatctttctgaggatgctcctgat 617 Query: 500 gatgttgaggg 510 || ||||||| Sbjct: 618 gacattgaggg 628 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 18 aaaagacgctcccctttccgccgcccaaatc 48 ||||| ||| ||||||||||||||||||||| Sbjct: 116 aaaaggcgcacccctttccgccgcccaaatc 146
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 127 bits (64), Expect = 4e-26 Identities = 84/91 (92%) Strand = Plus / Minus Query: 264 tcgagtacgggaggacgcatgtggtgaggcccaagggggcgcacaaggccaccatcgtct 323 ||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 3848245 tcgagtacgggcggacgcatgtcgtgaggcccaagggcgcgcacaaggccaccatcgtct 3848186 Query: 324 ggcttcacggcctcggcgacnatggagccag 354 |||| ||||||||||| ||| | |||||||| Sbjct: 3848185 ggctccacggcctcggggacaacggagccag 3848155 Score = 87.7 bits (44), Expect = 3e-14 Identities = 73/83 (87%) Strand = Plus / Plus Query: 266 gagtacgggaggacgcatgtggtgaggcccaagggggcgcacaaggccaccatcgtctgg 325 ||||||||||||||| | |||||||||||||||||| |||| |||||||||| || ||| Sbjct: 24273481 gagtacgggaggacgtacgtggtgaggcccaaggggaggcaccaggccaccattgtgtgg 24273540 Query: 326 cttcacggcctcggcgacnatgg 348 || || |||||||||||| |||| Sbjct: 24273541 ctccatggcctcggcgacaatgg 24273563 Score = 79.8 bits (40), Expect = 8e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 462 ggtttgacgttgctgatctttcagaagattctcctgatgatgttgaggggctggat 517 ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 3847217 ggtttgatgttgctgatctttcagaagacgctcctgatgatgttgaggggttggat 3847162 Score = 77.8 bits (39), Expect = 3e-11 Identities = 59/65 (90%), Gaps = 3/65 (4%) Strand = Plus / Minus Query: 182 ggagggacggcggcggcggcgactgttcgcgggatg---agcttcggcggcgccagctcc 238 |||||| ||||||||||||||| ||||||||||||| |||||||||||| |||||||| Sbjct: 3848513 ggaggggcggcggcggcggcgattgttcgcgggatgagcagcttcggcggcaccagctcc 3848454 Query: 239 gtcgc 243 ||||| Sbjct: 3848453 gtcgc 3848449 Score = 71.9 bits (36), Expect = 2e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 392 ataanatggatttgcccaactgcacctacgaggcccgtggcaatttttggtggattccca 451 |||| |||||||||||| || || ||||| ||||| |||||| |||||||||| |||||| Sbjct: 3847420 ataaaatggatttgccccaccgcgcctacaaggccagtggcagtttttggtgggttccca 3847361 Query: 452 tctactgcatg 462 || |||||||| Sbjct: 3847360 tcaactgcatg 3847350 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 17 gaaaagacgctcccctttccgccgcccaaatcc 49 |||||| |||||||||||||||||||||||||| Sbjct: 3848766 gaaaagtcgctcccctttccgccgcccaaatcc 3848734 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 462 ggtttgacgttgctgatctttcagaagattctcctga 498 ||||||| ||| ||||||||||||||||| ||||||| Sbjct: 19090215 ggtttgatgttactgatctttcagaagatgctcctga 19090179 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Minus Query: 352 cagctggtctcaactgttggaaactcttccccttcc 387 ||||||||||||||| ||||||| ||||||||||| Sbjct: 3847590 cagctggtctcaactactggaaacccttccccttcc 3847555
>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0089K24 Length = 154137 Score = 127 bits (64), Expect = 4e-26 Identities = 84/91 (92%) Strand = Plus / Minus Query: 264 tcgagtacgggaggacgcatgtggtgaggcccaagggggcgcacaaggccaccatcgtct 323 ||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 121787 tcgagtacgggcggacgcatgtcgtgaggcccaagggcgcgcacaaggccaccatcgtct 121728 Query: 324 ggcttcacggcctcggcgacnatggagccag 354 |||| ||||||||||| ||| | |||||||| Sbjct: 121727 ggctccacggcctcggggacaacggagccag 121697 Score = 79.8 bits (40), Expect = 8e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 462 ggtttgacgttgctgatctttcagaagattctcctgatgatgttgaggggctggat 517 ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 120759 ggtttgatgttgctgatctttcagaagacgctcctgatgatgttgaggggttggat 120704 Score = 77.8 bits (39), Expect = 3e-11 Identities = 59/65 (90%), Gaps = 3/65 (4%) Strand = Plus / Minus Query: 182 ggagggacggcggcggcggcgactgttcgcgggatg---agcttcggcggcgccagctcc 238 |||||| ||||||||||||||| ||||||||||||| |||||||||||| |||||||| Sbjct: 122055 ggaggggcggcggcggcggcgattgttcgcgggatgagcagcttcggcggcaccagctcc 121996 Query: 239 gtcgc 243 ||||| Sbjct: 121995 gtcgc 121991 Score = 71.9 bits (36), Expect = 2e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 392 ataanatggatttgcccaactgcacctacgaggcccgtggcaatttttggtggattccca 451 |||| |||||||||||| || || ||||| ||||| |||||| |||||||||| |||||| Sbjct: 120962 ataaaatggatttgccccaccgcgcctacaaggccagtggcagtttttggtgggttccca 120903 Query: 452 tctactgcatg 462 || |||||||| Sbjct: 120902 tcaactgcatg 120892 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 17 gaaaagacgctcccctttccgccgcccaaatcc 49 |||||| |||||||||||||||||||||||||| Sbjct: 122308 gaaaagtcgctcccctttccgccgcccaaatcc 122276 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Minus Query: 352 cagctggtctcaactgttggaaactcttccccttcc 387 ||||||||||||||| ||||||| ||||||||||| Sbjct: 121132 cagctggtctcaactactggaaacccttccccttcc 121097
>dbj|AK069125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004J23, full insert sequence Length = 1202 Score = 123 bits (62), Expect = 6e-25 Identities = 129/152 (84%) Strand = Plus / Plus Query: 266 gagtacgggaggacgcatgtggtgaggcccaagggggcgcacaaggccaccatcgtctgg 325 ||||||||||||||| | |||||||||||||||||| |||| |||||||||| || ||| Sbjct: 176 gagtacgggaggacgtacgtggtgaggcccaaggggaggcaccaggccaccattgtgtgg 235 Query: 326 cttcacggcctcggcgacnatggagccagctggtctcaactgttggaaactcttcccctt 385 || || |||||||||||| |||| || |||||||| || || |||| ||||||| || Sbjct: 236 ctccatggcctcggcgacaatggcgcaagctggtcccagctactggattctcttcctctg 295 Query: 386 cctaatataanatggatttgcccaactgcacc 417 |||||||| | |||||||||||| |||||||| Sbjct: 296 cctaatatcaaatggatttgccctactgcacc 327
>dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046B10 Length = 142596 Score = 87.7 bits (44), Expect = 3e-14 Identities = 73/83 (87%) Strand = Plus / Plus Query: 266 gagtacgggaggacgcatgtggtgaggcccaagggggcgcacaaggccaccatcgtctgg 325 ||||||||||||||| | |||||||||||||||||| |||| |||||||||| || ||| Sbjct: 98045 gagtacgggaggacgtacgtggtgaggcccaaggggaggcaccaggccaccattgtgtgg 98104 Query: 326 cttcacggcctcggcgacnatgg 348 || || |||||||||||| |||| Sbjct: 98105 ctccatggcctcggcgacaatgg 98127
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 87.7 bits (44), Expect = 3e-14 Identities = 73/83 (87%) Strand = Plus / Plus Query: 266 gagtacgggaggacgcatgtggtgaggcccaagggggcgcacaaggccaccatcgtctgg 325 ||||||||||||||| | |||||||||||||||||| |||| |||||||||| || ||| Sbjct: 19385 gagtacgggaggacgtacgtggtgaggcccaaggggaggcaccaggccaccattgtgtgg 19444 Query: 326 cttcacggcctcggcgacnatgg 348 || || |||||||||||| |||| Sbjct: 19445 ctccatggcctcggcgacaatgg 19467
>ref|XM_475991.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 705 Score = 67.9 bits (34), Expect = 3e-08 Identities = 84/101 (83%) Strand = Plus / Plus Query: 266 gagtacgggaggacgcatgtggtgaggcccaagggggcgcacaaggccaccatcgtctgg 325 |||||||||||||| ||||||||||||| ||||| |||| | |||||||| || ||| Sbjct: 52 gagtacgggaggacctatgtggtgaggccaaagggaaggcaccaagccaccattgtgtgg 111 Query: 326 cttcacggcctcggcgacnatggagccagctggtctcaact 366 ||||| ||||| || ||| |||| || |||||||| ||||| Sbjct: 112 cttcatggcctaggtgacaatggtgcaagctggtcccaact 152 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 437 tttggtggattcccatctactgcatggtttga 468 |||||||||||||| | |||||||||||||| Sbjct: 223 tttggtggattcccttgcactgcatggtttga 254
>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05, complete sequence Length = 108479 Score = 56.0 bits (28), Expect = 1e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 266 gagtacgggaggacgcatgtggtgaggcccaagggggcgcacaaggccaccatcgtctgg 325 |||||||||||||| ||||||||||||| ||||| |||| | |||||||| || ||| Sbjct: 86875 gagtacgggaggacctatgtggtgaggccaaagggaaggcaccaagccaccattgtgtgg 86816 Query: 326 cttcacggcctcggcgacnatgg 348 ||||| ||||| || ||| |||| Sbjct: 86815 cttcatggcctaggtgacaatgg 86793
>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04, complete sequence Length = 100800 Score = 56.0 bits (28), Expect = 1e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 266 gagtacgggaggacgcatgtggtgaggcccaagggggcgcacaaggccaccatcgtctgg 325 |||||||||||||| ||||||||||||| ||||| |||| | |||||||| || ||| Sbjct: 3044 gagtacgggaggacctatgtggtgaggccaaagggaaggcaccaagccaccattgtgtgg 2985 Query: 326 cttcacggcctcggcgacnatgg 348 ||||| ||||| || ||| |||| Sbjct: 2984 cttcatggcctaggtgacaatgg 2962
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 56.0 bits (28), Expect = 1e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 266 gagtacgggaggacgcatgtggtgaggcccaagggggcgcacaaggccaccatcgtctgg 325 |||||||||||||| ||||||||||||| ||||| |||| | |||||||| || ||| Sbjct: 29076820 gagtacgggaggacctatgtggtgaggccaaagggaaggcaccaagccaccattgtgtgg 29076761 Query: 326 cttcacggcctcggcgacnatgg 348 ||||| ||||| || ||| |||| Sbjct: 29076760 cttcatggcctaggtgacaatgg 29076738 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 gacggcggcggcggcgactg 206 |||||||||||||||||||| Sbjct: 1478969 gacggcggcggcggcgactg 1478950
>ref|NM_001036832.1| Arabidopsis thaliana carboxylic ester hydrolase AT5G20060 transcript variant AT5G20060.3 mRNA, complete cds Length = 1158 Score = 54.0 bits (27), Expect = 5e-04 Identities = 53/62 (85%) Strand = Plus / Plus Query: 353 agctggtctcaactgttggaaactcttccccttcctaatataanatggatttgcccaact 412 |||||||| || || ||||| || ||||||||||| ||||| | |||||||||||| ||| Sbjct: 374 agctggtcccagcttttggagacccttccccttccaaatatcaaatggatttgcccgact 433 Query: 413 gc 414 || Sbjct: 434 gc 435
>ref|NM_203086.1| Arabidopsis thaliana carboxylic ester hydrolase AT5G20060 transcript variant AT5G20060.2 mRNA, complete cds Length = 1461 Score = 54.0 bits (27), Expect = 5e-04 Identities = 53/62 (85%) Strand = Plus / Plus Query: 353 agctggtctcaactgttggaaactcttccccttcctaatataanatggatttgcccaact 412 |||||||| || || ||||| || ||||||||||| ||||| | |||||||||||| ||| Sbjct: 706 agctggtcccagcttttggagacccttccccttccaaatatcaaatggatttgcccgact 765 Query: 413 gc 414 || Sbjct: 766 gc 767
>ref|NM_122013.2| Arabidopsis thaliana carboxylic ester hydrolase AT5G20060 transcript variant AT5G20060.1 mRNA, complete cds Length = 1012 Score = 54.0 bits (27), Expect = 5e-04 Identities = 53/62 (85%) Strand = Plus / Plus Query: 353 agctggtctcaactgttggaaactcttccccttcctaatataanatggatttgcccaact 412 |||||||| || || ||||| || ||||||||||| ||||| | |||||||||||| ||| Sbjct: 257 agctggtcccagcttttggagacccttccccttccaaatatcaaatggatttgcccgact 316 Query: 413 gc 414 || Sbjct: 317 gc 318
>gb|BT000428.1| Arabidopsis thaliana putative protein (At5g20060) mRNA, complete cds Length = 992 Score = 54.0 bits (27), Expect = 5e-04 Identities = 53/62 (85%) Strand = Plus / Plus Query: 353 agctggtctcaactgttggaaactcttccccttcctaatataanatggatttgcccaact 412 |||||||| || || ||||| || ||||||||||| ||||| | |||||||||||| ||| Sbjct: 237 agctggtcccagcttttggagacccttccccttccaaatatcaaatggatttgcccgact 296 Query: 413 gc 414 || Sbjct: 297 gc 298
>emb|BX831942.1|CNS09ZOF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH40ZD11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1372 Score = 54.0 bits (27), Expect = 5e-04 Identities = 53/62 (85%) Strand = Plus / Plus Query: 353 agctggtctcaactgttggaaactcttccccttcctaatataanatggatttgcccaact 412 |||||||| || || ||||| || ||||||||||| ||||| | |||||||||||| ||| Sbjct: 706 agctggtcccagcttttggagacccttccccttccaaatatcaaatggatttgcccgact 765 Query: 413 gc 414 || Sbjct: 766 gc 767
>gb|AY088171.1| Arabidopsis thaliana clone 42475 mRNA, complete sequence Length = 1011 Score = 54.0 bits (27), Expect = 5e-04 Identities = 53/62 (85%) Strand = Plus / Plus Query: 353 agctggtctcaactgttggaaactcttccccttcctaatataanatggatttgcccaact 412 |||||||| || || ||||| || ||||||||||| ||||| | |||||||||||| ||| Sbjct: 256 agctggtcccagcttttggagacccttccccttccaaatatcaaatggatttgcccgact 315 Query: 413 gc 414 || Sbjct: 316 gc 317
>gb|BT001175.1| Arabidopsis thaliana putative protein (At5g20060) mRNA, complete cds Length = 832 Score = 54.0 bits (27), Expect = 5e-04 Identities = 53/62 (85%) Strand = Plus / Plus Query: 353 agctggtctcaactgttggaaactcttccccttcctaatataanatggatttgcccaact 412 |||||||| || || ||||| || ||||||||||| ||||| | |||||||||||| ||| Sbjct: 142 agctggtcccagcttttggagacccttccccttccaaatatcaaatggatttgcccgact 201 Query: 413 gc 414 || Sbjct: 202 gc 203
>dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702H08 Length = 166899 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 462 ggtttgacgttgctgatctttcagaagattctcctga 498 ||||||| ||| ||||||||||||||||| ||||||| Sbjct: 55632 ggtttgatgttactgatctttcagaagatgctcctga 55596
>dbj|AK106476.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-C07, full insert sequence Length = 1510 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 462 ggtttgacgttgctgatctttcagaagattctcctga 498 ||||||| ||| ||||||||||||||||| ||||||| Sbjct: 1312 ggtttgatgttactgatctttcagaagatgctcctga 1276
>ref|XM_548607.2| PREDICTED: Canis familiaris similar to ankylosis, progressive homolog (LOC491486), mRNA Length = 1751 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 179 agaggagggacggcggcggcggcg 202 |||||||||||||||||||||||| Sbjct: 71 agaggagggacggcggcggcggcg 48
>gb|AC148176.11| Medicago truncatula clone mth2-3j15, complete sequence Length = 119267 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 352 cagctggtctcaactgttggaaactcttccccttcc 387 ||||||||| ||||| |||||||||||||| ||||| Sbjct: 82173 cagctggtcccaactattggaaactcttcctcttcc 82208
>ref|NM_054027.3| Homo sapiens ankylosis, progressive homolog (mouse) (ANKH), mRNA Length = 4086 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 179 agaggagggacggcggcggcggcg 202 |||||||||||||||||||||||| Sbjct: 60 agaggagggacggcggcggcggcg 37
>gb|BC107886.1| Homo sapiens RNA-binding region (RNP1, RRM) containing 2, mRNA (cDNA clone IMAGE:6668060) Length = 2770 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 179 agaggagggacggcggcggcggcg 202 |||||||||||||||||||||||| Sbjct: 11 agaggagggacggcggcggcggcg 34
>gb|AC025456.7| Homo sapiens chromosome 5 clone CTD-2197O4, complete sequence Length = 139086 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 179 agaggagggacggcggcggcggcg 202 |||||||||||||||||||||||| Sbjct: 139042 agaggagggacggcggcggcggcg 139065
>gb|AC016575.7| Homo sapiens chromosome 5 clone CTB-40H15, complete sequence Length = 184562 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 179 agaggagggacggcggcggcggcg 202 |||||||||||||||||||||||| Sbjct: 183970 agaggagggacggcggcggcggcg 183947
>ref|XM_473988.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 795 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 182 ggagggacggcggcggcggcgac 204 ||||||||||||||||||||||| Sbjct: 563 ggagggacggcggcggcggcgac 585
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 182 ggagggacggcggcggcggcgac 204 ||||||||||||||||||||||| Sbjct: 32031940 ggagggacggcggcggcggcgac 32031962 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 gagaggagggacggcggcggcggcg 202 |||||||||| |||||||||||||| Sbjct: 26396758 gagaggaggggcggcggcggcggcg 26396734
>emb|AL732334.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0323C08, complete sequence Length = 94903 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 182 ggagggacggcggcggcggcgac 204 ||||||||||||||||||||||| Sbjct: 15217 ggagggacggcggcggcggcgac 15239
>gb|AC113018.7| Mus musculus chromosome 5, clone RP23-183C18, complete sequence Length = 215671 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 ccctcctttctcttccccatccc 70 ||||||||||||||||||||||| Sbjct: 172803 ccctcctttctcttccccatccc 172781
>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06, complete sequence Length = 141752 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 182 ggagggacggcggcggcggcgac 204 ||||||||||||||||||||||| Sbjct: 52647 ggagggacggcggcggcggcgac 52669
>ref|NM_184974.1| Oryza sativa (japonica cultivar-group), mRNA Length = 801 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 182 ggagggacggcggcggcggcga 203 |||||||||||||||||||||| Sbjct: 245 ggagggacggcggcggcggcga 266
>ref|XM_465429.1| Oryza sativa (japonica cultivar-group), mRNA Length = 732 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccctcctttctcttccccatcc 69 |||||||||||||||||||||| Sbjct: 21 ccctcctttctcttccccatcc 42
>gb|AC147049.2| Pan troglodytes BAC clone RP43-131M1 from 3, complete sequence Length = 185806 Score = 44.1 bits (22), Expect = 0.45 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 47 tccctcctttc-tcttccccatccctccct 75 ||||||||||| |||||||||||||||||| Sbjct: 63179 tccctcctttcatcttccccatccctccct 63150
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 182 ggagggacggcggcggcggcga 203 |||||||||||||||||||||| Sbjct: 31958439 ggagggacggcggcggcggcga 31958460 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 182 ggagggacggcggcggcggcga 203 |||||||||||||||||||||| Sbjct: 31958312 ggagggacggcggcggcggcga 31958333 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 ggagggacggcggcggcggcg 202 ||||||||||||||||||||| Sbjct: 32766783 ggagggacggcggcggcggcg 32766803
>gb|AC073275.8| Homo sapiens BAC clone RP11-651K8 from 7, complete sequence Length = 111873 Score = 44.1 bits (22), Expect = 0.45 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 47 tccctcctttc-tcttccccatccctccct 75 ||||||||||| |||||||||||||||||| Sbjct: 48572 tccctcctttcatcttccccatccctccct 48601
>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete sequence Length = 144306 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 182 ggagggacggcggcggcggcga 203 |||||||||||||||||||||| Sbjct: 50391 ggagggacggcggcggcggcga 50412 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 182 ggagggacggcggcggcggcga 203 |||||||||||||||||||||| Sbjct: 50264 ggagggacggcggcggcggcga 50285
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 182 ggagggacggcggcggcggcga 203 |||||||||||||||||||||| Sbjct: 32048951 ggagggacggcggcggcggcga 32048972 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 182 ggagggacggcggcggcggcga 203 |||||||||||||||||||||| Sbjct: 32048824 ggagggacggcggcggcggcga 32048845 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 ggagggacggcggcggcggcg 202 ||||||||||||||||||||| Sbjct: 32857293 ggagggacggcggcggcggcg 32857313
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccctcctttctcttccccatcc 69 |||||||||||||||||||||| Sbjct: 15084614 ccctcctttctcttccccatcc 15084593 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 gagggacggcggcggcggcg 202 |||||||||||||||||||| Sbjct: 34814520 gagggacggcggcggcggcg 34814539
>dbj|AP004816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0533E11 Length = 150678 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 ccctcctttctcttccccatcc 69 |||||||||||||||||||||| Sbjct: 90395 ccctcctttctcttccccatcc 90374
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 tcctttctcttccccatccctc 72 |||||||||||||||||||||| Sbjct: 173639 tcctttctcttccccatccctc 173660
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome Length = 150715 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 180 gaggagggacggcggcggcggcgac 204 |||||||| |||||||||||||||| Sbjct: 144241 gaggagggccggcggcggcggcgac 144265 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 180 gaggagggacggcggcggcggcgac 204 |||||||| |||||||||||||||| Sbjct: 129768 gaggagggccggcggcggcggcgac 129744
>ref|XM_473259.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1965 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 178 gagaggagggacggcggcggcggcg 202 |||||||||| |||||||||||||| Sbjct: 511 gagaggaggggcggcggcggcggcg 535
>gb|AF238378.5| Homo sapiens chromosome 8 clone SCb-561b17 map p23.1, complete sequence Length = 128544 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 124162 tccctcctttctcttccccat 124142
>gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete sequence Length = 141582 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 ggagggacggcggcggcggcg 202 ||||||||||||||||||||| Sbjct: 112758 ggagggacggcggcggcggcg 112738
>gb|AF228730.8| Homo sapiens chromosome 8 clones SCb-332a23, CTB-415D8 map p23.1, complete sequences Length = 295854 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 173544 tccctcctttctcttccccat 173564 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 60027 tccctcctttctcttccccat 60007
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cgtcgcggccggtgcgaagcg 258 ||||||||||||||||||||| Sbjct: 580955 cgtcgcggccggtgcgaagcg 580935
>gb|AC099621.12| Mus musculus chromosome 15, clone RP23-468J2, complete sequence Length = 178810 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 cctcctttctcttccccatccctcc 73 |||||| |||||||||||||||||| Sbjct: 119698 cctcctatctcttccccatccctcc 119674
>gb|AC116656.5| Mus musculus BAC clone RP23-10A7 from chromosome 15, complete sequence Length = 198019 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 49 cctcctttctcttccccatccctcc 73 |||||| |||||||||||||||||| Sbjct: 131702 cctcctatctcttccccatccctcc 131726
>gb|AC092902.10| Homo sapiens 3 BAC RP11-379B18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 124071 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 15309 tccctcctttctcttccccat 15289
>gb|AC079781.7| Homo sapiens BAC clone RP11-380G21 from 7, complete sequence Length = 97556 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 73733 tccctcctttctcttccccat 73753
>emb|AL096867.15|HSJ365O19 Human DNA sequence from clone RP3-365O19 on chromosome 6q23.1-24.3 Contains the 5' end of the GRM1 gene for metabotropic glutamate receptor 1, complete sequence Length = 156935 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 tctcttccccatccctccctc 76 ||||||||||||||||||||| Sbjct: 128415 tctcttccccatccctccctc 128435
>gb|AC183110.3| Pan troglodytes BAC clone CH251-353M12 from chromosome 8, complete sequence Length = 165123 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 1362 tccctcctttctcttccccat 1342
>gb|AC084121.13| Homo sapiens chromosome 8, clone RP11-623J22, complete sequence Length = 171018 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 165752 tccctcctttctcttccccat 165732
>gb|AC034259.7| Homo sapiens chromosome 11, clone RP11-138N3, complete sequence Length = 206192 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 137315 tccctcctttctcttccccat 137295
>gb|AC116562.6| Homo sapiens BAC clone RP11-489M13 from 4, complete sequence Length = 174826 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 149460 tccctcctttctcttccccat 149480
>gb|AC092865.10| Homo sapiens 12 BAC RP11-113C12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 117296 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 89018 tccctcctttctcttccccat 88998
>gb|AC140322.4| Mus musculus BAC clone RP23-413F14 from chromosome 14, complete sequence Length = 205679 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 cctcctttctcttccccatccctcc 73 ||||||| ||||||||||||||||| Sbjct: 140534 cctccttgctcttccccatccctcc 140510
>gb|AC097493.3| Homo sapiens BAC clone RP11-264E23 from 4, complete sequence Length = 163639 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 86344 tccctcctttctcttccccat 86324
>gb|AC090354.8| Homo sapiens chromosome 18, clone RP11-735P10, complete sequence Length = 211162 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 tcaactgttggaaactcttcc 381 ||||||||||||||||||||| Sbjct: 159214 tcaactgttggaaactcttcc 159194
>gb|AC000385.2| Homo sapiens chromosome 11 clone PAC pDJ392a17, complete sequence Length = 164155 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 93115 tccctcctttctcttccccat 93135 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 34901 tccctcctttctcttccccat 34921
>gb|AF462441.1|AF462441 Lirula macrospora LM-CASTCBS 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 568 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 219 gcttcggcggcgccagctccg 239 ||||||||||||||||||||| Sbjct: 122 gcttcggcggcgccagctccg 142
>gb|AF462440.1|AF462440 Lirula macrospora LM-WALHALLA 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 571 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 219 gcttcggcggcgccagctccg 239 ||||||||||||||||||||| Sbjct: 122 gcttcggcggcgccagctccg 142
>gb|AC165267.2| Zea mays clone ZMMBBb-151F20, complete sequence Length = 115478 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 128 gctgcccaggccattggattcgtgg 152 ||||||| ||||||||||||||||| Sbjct: 67673 gctgccctggccattggattcgtgg 67697 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 128 gctgcccaggccattggattcgtgg 152 ||||||| ||||||||||||||||| Sbjct: 62584 gctgccctggccattggattcgtgg 62608
>gb|AC073648.7| Homo sapiens BAC clone RP11-747H12 from 4, complete sequence Length = 180659 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 93657 tccctcctttctcttccccat 93677
>gb|AC092766.4| Homo sapiens chromosome 8, clone RP11-483N3, complete sequence Length = 155847 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 26308 tccctcctttctcttccccat 26288
>gb|AC004923.2| Homo sapiens PAC clone RP5-901A4 from 11, complete sequence Length = 94851 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 82498 tccctcctttctcttccccat 82478
>gb|AC074051.4| Homo sapiens chromosome 16 clone RP11-382N13, complete sequence Length = 218133 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 91317 tccctcctttctcttccccat 91297
>gb|AC116655.7| Homo sapiens BAC clone RP11-1396O13 from 4, complete sequence Length = 246224 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 28709 tccctcctttctcttccccat 28729
>gb|AC115991.4| Homo sapiens chromosome 11, clone CTC-342M10, complete sequence Length = 48955 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 3036 tccctcctttctcttccccat 3056
>gb|AC127526.11| Homo sapiens chromosome 11, clone RP13-726E6, complete sequence Length = 163733 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 152783 tccctcctttctcttccccat 152803
>gb|AC068587.16| Homo sapiens chromosome 8, clone RP11-303G3, complete sequence Length = 174171 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 115546 tccctcctttctcttccccat 115566 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 57628 tccctcctttctcttccccat 57648
>gb|AC011298.7| Homo sapiens BAC clone RP11-118M12 from 2, complete sequence Length = 174221 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 tctcttccccatccctccctc 76 ||||||||||||||||||||| Sbjct: 74715 tctcttccccatccctccctc 74735
>gb|AC138430.2| Homo sapiens chromosome 19 clone LLNLR-259H9, complete sequence Length = 43185 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 cctcctttctcttccccatcc 69 ||||||||||||||||||||| Sbjct: 25557 cctcctttctcttccccatcc 25537
>gb|AC105233.12| Homo sapiens chromosome 8, clone RP11-52B19, complete sequence Length = 151841 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 56322 tccctcctttctcttccccat 56342
>gb|AC112784.5| Homo sapiens BAC clone RP13-555N8 from 2, complete sequence Length = 196451 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 tctcttccccatccctccctc 76 ||||||||||||||||||||| Sbjct: 119659 tctcttccccatccctccctc 119679
>gb|AF061779.1|AF061779 Homo sapiens cosmid 25, complete sequence Length = 47344 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 11758 tccctcctttctcttccccat 11778
>dbj|AK066562.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074L13, full insert sequence Length = 2084 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 ggagggacggcggcggcggcg 202 ||||||||||||||||||||| Sbjct: 168 ggagggacggcggcggcggcg 148
>dbj|AP006294.1| Homo sapiens genomic DNA, chromosome 11 clone:CTC-342M10, complete sequence Length = 83489 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 3035 tccctcctttctcttccccat 3055
>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08, complete sequence Length = 171551 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 gagaggagggacggcggcggcggcg 202 |||||||||| |||||||||||||| Sbjct: 37391 gagaggaggggcggcggcggcggcg 37367
>gb|AC005254.1|AC005254 Homo sapiens chromosome 19, long range PCR product from cosmid R29861, complete sequence Length = 20988 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 cctcctttctcttccccatcc 69 ||||||||||||||||||||| Sbjct: 6692 cctcctttctcttccccatcc 6712
>gb|U73627.1|U73627 Human Chromosome 11 Cosmid cSRL186g7, complete sequence Length = 37443 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 10881 tccctcctttctcttccccat 10901
>dbj|AP005270.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-291B19, complete sequence Length = 200493 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 cctttctcttccccatccctccctc 76 |||||||||||||| |||||||||| Sbjct: 29496 cctttctcttccccctccctccctc 29520
>gb|AF215847.4| Homo sapiens chromosome 8 clone CTB-877E9 map p23.1, complete sequence Length = 103417 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 23596 tccctcctttctcttccccat 23616
>dbj|AP000867.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-684B2, complete sequences Length = 199999 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 tccctcctttctcttccccat 67 ||||||||||||||||||||| Sbjct: 175592 tccctcctttctcttccccat 175572
>ref|NM_104148.4| Arabidopsis thaliana carboxylic ester hydrolase AT1G52700 mRNA, complete cds Length = 902 Score = 40.1 bits (20), Expect = 7.0 Identities = 73/91 (80%) Strand = Plus / Plus Query: 383 cttcctaatataanatggatttgcccaactgcacctacgaggcccgtggcaatttttggt 442 ||||| ||||||| ||||||||| ||||| || ||| || | || || ||| | ||||| Sbjct: 246 cttccaaatataaaatggatttgtccaaccgctccttcgcgtcctgttacaagtcttggt 305 Query: 443 ggattcccatctactgcatggtttgacgttg 473 ||||| ||| ||||| ||||||||||||| Sbjct: 306 ggatttacatgcactgcttggtttgacgttg 336
>gb|AC151794.1| Ornithorhynchus anatinus chromosome UNK clone OABb-58A1, complete sequence Length = 148132 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 42 ccaaatccctcctttctcttcccc 65 |||||||||||||| ||||||||| Sbjct: 28803 ccaaatccctccttcctcttcccc 28780
>ref|XM_493960.1| Oryza sativa (japonica cultivar-group), Ozsa8025 predicted mRNA Length = 1425 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 aggagggacggcggcggcggcgac 204 |||||||||||||||| ||||||| Sbjct: 136 aggagggacggcggcgacggcgac 159
>ref|XM_483381.1| Oryza sativa (japonica cultivar-group), mRNA Length = 900 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gggacggcggcggcggcgac 204 |||||||||||||||||||| Sbjct: 444 gggacggcggcggcggcgac 425
>ref|XM_475563.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1797 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 gacggcggcggcggcgactg 206 |||||||||||||||||||| Sbjct: 939 gacggcggcggcggcgactg 920
>ref|XM_468354.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1522 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 gagggacggcggcggcggcg 202 |||||||||||||||||||| Sbjct: 914 gagggacggcggcggcggcg 933
>ref|XM_450857.1| Oryza sativa (japonica cultivar-group), mRNA Length = 474 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 agcttcggcggcgccagctccgtc 241 ||||||||||||||||| |||||| Sbjct: 174 agcttcggcggcgccagatccgtc 151
>ref|NM_006575.3| Homo sapiens mitogen-activated protein kinase kinase kinase kinase 5 (MAP4K5), transcript variant 1, mRNA Length = 4373 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 cggcggcggcggcgactgttcgcg 212 ||||||||||||||||||| |||| Sbjct: 73 cggcggcggcggcgactgtacgcg 96
>ref|NM_198794.1| Homo sapiens mitogen-activated protein kinase kinase kinase kinase 5 (MAP4K5), transcript variant 2, mRNA Length = 4421 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 cggcggcggcggcgactgttcgcg 212 ||||||||||||||||||| |||| Sbjct: 73 cggcggcggcggcgactgtacgcg 96
>ref|NM_187313.1| Oryza sativa (japonica cultivar-group), mRNA Length = 447 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 aggagggacggcggcggcggcgac 204 ||||||| |||||||||||||||| Sbjct: 193 aggagggccggcggcggcggcgac 216
>gb|AC116494.8| Mus musculus chromosome 7, clone RP24-291G23, complete sequence Length = 201187 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cctcctttctcttccccatc 68 |||||||||||||||||||| Sbjct: 116276 cctcctttctcttccccatc 116295
>gb|AC161812.3| Mus musculus chromosome 15, clone RP23-195I24, complete sequence Length = 204464 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 cctttctcttccccatccctccct 75 |||||||||||||| ||||||||| Sbjct: 68018 cctttctcttccccctccctccct 67995
>gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0004E08, complete sequence Length = 158294 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 caggagaggagggacggcggcggc 198 |||||||||||| ||||||||||| Sbjct: 111440 caggagaggaggaacggcggcggc 111417
>gb|AC168275.4| Mus musculus 10 BAC RP23-350O21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188458 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 ttgctgatctttcagaagat 490 |||||||||||||||||||| Sbjct: 178347 ttgctgatctttcagaagat 178328
>gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078F08, complete sequence Length = 165440 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gggacggcggcggcggcgac 204 |||||||||||||||||||| Sbjct: 157524 gggacggcggcggcggcgac 157543
>gb|AC114657.8| Mus musculus chromosome 5, clone RP24-161C20, complete sequence Length = 161173 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 tgatgatgttgaggggctgg 515 |||||||||||||||||||| Sbjct: 525 tgatgatgttgaggggctgg 544
>gb|AC123071.3| Mus musculus BAC clone RP23-70P8 from chromosome 13, complete sequence Length = 252384 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 aaatccctcctttctcttcc 63 |||||||||||||||||||| Sbjct: 61146 aaatccctcctttctcttcc 61127
>gb|AC147996.3| Mus musculus BAC clone RP24-253L14 from chromosome Y, complete sequence Length = 149579 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 ctttctcttccccatccctccctc 76 ||||||||||||| |||||||||| Sbjct: 105921 ctttctcttccccctccctccctc 105898
>gb|AC132344.3| Mus musculus BAC clone RP24-177A17 from chromosome 13, complete sequence Length = 169661 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gggacggcggcggcggcgac 204 |||||||||||||||||||| Sbjct: 14260 gggacggcggcggcggcgac 14241
>gb|AC124537.5| Mus musculus BAC clone RP23-333J6 from chromosome 13, complete sequence Length = 186870 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gggacggcggcggcggcgac 204 |||||||||||||||||||| Sbjct: 159754 gggacggcggcggcggcgac 159735
>gb|AC132616.2| Mus musculus BAC clone RP23-317F10 from chromosome 14, complete sequence Length = 213684 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 ctcttccccatccctccctc 76 |||||||||||||||||||| Sbjct: 61672 ctcttccccatccctccctc 61691
>gb|AC122804.4| Mus musculus BAC clone RP23-296J10 from 6, complete sequence Length = 205659 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 ttgctgatctttcagaagat 490 |||||||||||||||||||| Sbjct: 4399 ttgctgatctttcagaagat 4380
>emb|AL589685.17| Human DNA sequence from clone RP11-443G18 on chromosome 1 Contains the 5' end of the gene for Est1p-like protein B (EST1B), novel gene (MGC13102), novel gene (MGC31963), a von Hippel-Lindau syndrome (VHL) pseudogene, the CCT3 gene for chaperonin containing TCP1 subunit 3 (gamma), the gene for SSTK-interacting protein (SSTK-IP) and the 5' end of the RHBG gene for Rhesus blood group B glycoprotein, complete sequence Length = 107819 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 478 tctttcagaagattctcctgatgatgtt 505 |||||||||| ||| ||||||||||||| Sbjct: 61219 tctttcagaacattttcctgatgatgtt 61192
>emb|AL391001.12| Human DNA sequence from clone RP11-477H21 on chromosome 1 Contains part of the PBX1 gene for pre-B-cell leukemia transcription factor 1, complete sequence Length = 196730 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 aatccctcctttctcttccc 64 |||||||||||||||||||| Sbjct: 22685 aatccctcctttctcttccc 22704
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cgtggcgttggcgagcgtgg 167 |||||||||||||||||||| Sbjct: 1154598 cgtggcgttggcgagcgtgg 1154617
>emb|AL157904.24| Human DNA sequence from clone RP4-753F5 on chromosome 1p13.1-13.3 Contains the 5' end of the PTGFRN gene for prostaglandin F2 receptor negative regulator and a CpG island, complete sequence Length = 117134 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 tcctttctcttccccatccc 70 |||||||||||||||||||| Sbjct: 87160 tcctttctcttccccatccc 87141
>ref|XM_969288.1| PREDICTED: Tribolium castaneum similar to CG33182-PA (LOC663231), mRNA Length = 3123 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 ccaagggggcgcacaaggcc 313 |||||||||||||||||||| Sbjct: 71 ccaagggggcgcacaaggcc 90
>emb|AL607152.21| Mouse DNA sequence from clone RP23-198N14 on chromosome 11, complete sequence Length = 232408 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 tggtcgccagcaggagagga 184 |||||||||||||||||||| Sbjct: 216611 tggtcgccagcaggagagga 216592
>gb|AC018950.9| Homo sapiens chromosome 15, clone RP11-200K22, complete sequence Length = 159729 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 tccctcctttctcttcccca 66 |||||||||||||||||||| Sbjct: 142793 tccctcctttctcttcccca 142774
>gb|AC087516.12| Homo sapiens chromosome 15, clone RP11-475A13, complete sequence Length = 187299 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 47 tccctcctttctcttccccatccctccc 74 |||| |||| |||||||||||||||||| Sbjct: 46449 tccccccttcctcttccccatccctccc 46422
>gb|AC104834.4| Mus Musculus Strain C57BL6/J Chromosome 15 RP23-274F23, complete sequence Length = 215113 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 cctttctcttccccatccctccct 75 |||||||||||||| ||||||||| Sbjct: 212015 cctttctcttccccctccctccct 212038
>dbj|AK125161.1| Homo sapiens cDNA FLJ43171 fis, clone FCBBF3006171 Length = 2482 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 cggcggcggcggcgactgttcgcg 212 ||||||||||||||||||| |||| Sbjct: 782 cggcggcggcggcgactgtacgcg 759
>gb|AC103988.7| Homo sapiens chromosome 15, clone RP11-618N24, complete sequence Length = 192400 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 47 tccctcctttctcttccccatccctccc 74 |||| |||| |||||||||||||||||| Sbjct: 10264 tccccccttcctcttccccatccctccc 10291
>gb|AC055777.12| Mus musculus chromosome 10, clone RP23-56K17, complete sequence Length = 186105 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 ttgctgatctttcagaagat 490 |||||||||||||||||||| Sbjct: 169419 ttgctgatctttcagaagat 169438
>gb|AE010269.1| Pyrococcus furiosus DSM 3638, section 144 of 173 of the complete genome Length = 10444 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 ttgctgatctttcagaagat 490 |||||||||||||||||||| Sbjct: 9315 ttgctgatctttcagaagat 9334
>dbj|AK151503.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830031B06 product:Hypothetical F-box domain containing protein, full insert sequence Length = 2620 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 gagggacggcggcggcggcg 202 |||||||||||||||||||| Sbjct: 1 gagggacggcggcggcggcg 20
>gb|AC022919.8| Homo sapiens chromosome 18, clone RP11-46D1, complete sequence Length = 159749 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gccagcaggagaggagggac 189 |||||||||||||||||||| Sbjct: 53580 gccagcaggagaggagggac 53561
>gb|AC182254.2| Mus musculus BAC clone RP24-66O22 from chromosome y, complete sequence Length = 175381 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 ctttctcttccccatccctccctc 76 ||||||||||||| |||||||||| Sbjct: 80245 ctttctcttccccctccctccctc 80222
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gggacggcggcggcggcgac 204 |||||||||||||||||||| Sbjct: 18578209 gggacggcggcggcggcgac 18578228
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 caggagaggagggacggcggcggc 198 |||||||||||| ||||||||||| Sbjct: 3520311 caggagaggaggaacggcggcggc 3520288
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 218 agcttcggcggcgccagctccgtc 241 ||||||||||||||||| |||||| Sbjct: 13254336 agcttcggcggcgccagatccgtc 13254359
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gggacggcggcggcggcgac 204 |||||||||||||||||||| Sbjct: 25943459 gggacggcggcggcggcgac 25943440
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 aggagggacggcggcggcggcgac 204 ||||||| |||||||||||||||| Sbjct: 17397143 aggagggccggcggcggcggcgac 17397166
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 aggagggacggcggcggcggcgac 204 |||||||||||||||| ||||||| Sbjct: 3632243 aggagggacggcggcgacggcgac 3632266
>gb|AF296107.1|AF296107 Porcine teschovirus strain Vir 6711-12/83 polyprotein gene, complete cds Length = 7017 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gggcgcacaaggccaccatc 319 |||||||||||||||||||| Sbjct: 6750 gggcgcacaaggccaccatc 6731
>dbj|AB071627.1| Oryza meridionalis gene for transcription factor OSH3, partial cds, cultivar: W1629 Length = 1066 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 gagggacggcggcggcggcg 202 |||||||||||||||||||| Sbjct: 237 gagggacggcggcggcggcg 256
>gb|AC048380.12| Homo sapiens chromosome 18, clone RP11-426J5, complete sequence Length = 224670 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gccagcaggagaggagggac 189 |||||||||||||||||||| Sbjct: 14105 gccagcaggagaggagggac 14124
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 aggagggacggcggcggcggcgac 204 ||||||| |||||||||||||||| Sbjct: 65367 aggagggccggcggcggcggcgac 65390
>dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0016F11 Length = 134907 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 gagggacggcggcggcggcg 202 |||||||||||||||||||| Sbjct: 132368 gagggacggcggcggcggcg 132387
>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0014B15 Length = 158821 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 aggagggacggcggcggcggcgac 204 |||||||||||||||| ||||||| Sbjct: 26471 aggagggacggcggcgacggcgac 26494
>dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0675A05 Length = 131972 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 aggagggacggcggcggcggcgac 204 |||||||||||||||| ||||||| Sbjct: 124080 aggagggacggcggcgacggcgac 124103
>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1003_A09 Length = 150755 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gggacggcggcggcggcgac 204 |||||||||||||||||||| Sbjct: 129246 gggacggcggcggcggcgac 129227
>dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0055N01 Length = 154783 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 218 agcttcggcggcgccagctccgtc 241 ||||||||||||||||| |||||| Sbjct: 75770 agcttcggcggcgccagatccgtc 75793
>dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0053L11 Length = 147123 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 gagggacggcggcggcggcg 202 |||||||||||||||||||| Sbjct: 36115 gagggacggcggcggcggcg 36134
>dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1081_B12 Length = 124741 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gggacggcggcggcggcgac 204 |||||||||||||||||||| Sbjct: 28336 gggacggcggcggcggcgac 28317
>dbj|AK119748.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-F11, full insert sequence Length = 2374 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 gacggcggcggcggcgactg 206 |||||||||||||||||||| Sbjct: 1202 gacggcggcggcggcgactg 1183
>dbj|AK108208.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-D07, full insert sequence Length = 900 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gggacggcggcggcggcgac 204 |||||||||||||||||||| Sbjct: 444 gggacggcggcggcggcgac 425
>dbj|AK106918.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-B02, full insert sequence Length = 1522 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 gagggacggcggcggcggcg 202 |||||||||||||||||||| Sbjct: 914 gagggacggcggcggcggcg 933
>dbj|AK100886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128H22, full insert sequence Length = 1958 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 aggagggacggcggcggcggcgac 204 |||||||||||||||| ||||||| Sbjct: 484 aggagggacggcggcgacggcgac 507
>dbj|AK072141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122I07, full insert sequence Length = 2916 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 gacggcggcggcggcgactg 206 |||||||||||||||||||| Sbjct: 1825 gacggcggcggcggcgactg 1806
>dbj|AK064924.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000N15, full insert sequence Length = 2218 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 gacggcggcggcggcgactg 206 |||||||||||||||||||| Sbjct: 1025 gacggcggcggcggcgactg 1006
>gb|AC114614.9| Mus musculus chromosome 5, clone RP24-81J14, complete sequence Length = 206921 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 tgatgatgttgaggggctgg 515 |||||||||||||||||||| Sbjct: 34563 tgatgatgttgaggggctgg 34544
>gb|AC156387.5| Mus musculus 10 BAC RP24-396H15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 230270 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 ttgctgatctttcagaagat 490 |||||||||||||||||||| Sbjct: 139832 ttgctgatctttcagaagat 139813
>gb|AC159206.2| Mus musculus BAC clone RP23-214M19 from chromosome 7, complete sequence Length = 224088 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 tcctttctcttccccatccctccc 74 ||||||||||||||| |||||||| Sbjct: 42334 tcctttctcttccccttccctccc 42357
>emb|AL118556.4|CNS01DRR Human chromosome 14 DNA sequence BAC R-406H23 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 170597 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 cggcggcggcggcgactgttcgcg 212 ||||||||||||||||||| |||| Sbjct: 127938 cggcggcggcggcgactgtacgcg 127915
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 caggagaggagggacggcggcggc 198 |||||||||||| ||||||||||| Sbjct: 3520232 caggagaggaggaacggcggcggc 3520209
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gggacggcggcggcggcgac 204 |||||||||||||||||||| Sbjct: 18737610 gggacggcggcggcggcgac 18737629
>gb|AC147250.4| Mus musculus BAC clone RP24-109P17 from 13, complete sequence Length = 196150 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 aaatccctcctttctcttcc 63 |||||||||||||||||||| Sbjct: 19039 aaatccctcctttctcttcc 19058
>gb|AC104098.5| Mus musculus BAC clone RP24-372H3 from 5, complete sequence Length = 180886 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 ctttctcttccccatccctccctc 76 ||||||||||||| |||||||||| Sbjct: 142365 ctttctcttccccttccctccctc 142342
>gb|AC125341.4| Mus musculus BAC clone RP24-459O3 from 6, complete sequence Length = 167607 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 ttgctgatctttcagaagat 490 |||||||||||||||||||| Sbjct: 128127 ttgctgatctttcagaagat 128108
>emb|AL591514.7| Mouse DNA sequence from clone RP23-266L14 on chromosome 11, complete sequence Length = 229872 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cctcctttctcttccccatc 68 |||||||||||||||||||| Sbjct: 169987 cctcctttctcttccccatc 169968
>gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683F12, complete sequence Length = 144455 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 gacggcggcggcggcgactg 206 |||||||||||||||||||| Sbjct: 73049 gacggcggcggcggcgactg 73030 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,910,656 Number of Sequences: 3902068 Number of extensions: 4910656 Number of successful extensions: 239615 Number of sequences better than 10.0: 162 Number of HSP's better than 10.0 without gapping: 164 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 230433 Number of HSP's gapped (non-prelim): 9175 length of query: 518 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 495 effective length of database: 17,143,297,704 effective search space: 8485932363480 effective search space used: 8485932363480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
