Clone Name | bart08b05 |
---|---|
Clone Library Name | barley_pub |
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 62.0 bits (149), Expect = 5e-10 Identities = 37/78 (47%), Positives = 47/78 (60%), Gaps = 3/78 (3%) Frame = +3 Query: 192 YYNAIFSFGDSFSDTGNFVII--NSGKLPNMPKFPPPYARCSNGRLVIDFLAEALGVPLL 365 ++ AIF+FGDS SDTG +G F P R +GRLVIDF+AE+LG+P L Sbjct: 27 HFPAIFNFGDSNSDTGGLSAAFGQAGPPHGSSFFGSPAGRYCDGRLVIDFIAESLGLPYL 86 Query: 366 PPSANK-GTNFSQGANFA 416 + G+NFS GANFA Sbjct: 87 SAFLDSVGSNFSHGANFA 104
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 57.4 bits (137), Expect = 1e-08 Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 10/84 (11%) Frame = +3 Query: 195 YNAIFSFGDSFSDTGNFVIINSGKLPNMPKFPPPYA---------RCSNGRLVIDFLAEA 347 + AIF+FGDS SDTG GK PPY R S+GRL+IDF+AE+ Sbjct: 32 FPAIFNFGDSNSDTG-------GKAAAFYPLNPPYGETFFHRSTGRYSDGRLIIDFIAES 84 Query: 348 LGVPLLPP-SANKGTNFSQGANFA 416 +P L P ++ G+NF GA+FA Sbjct: 85 FNLPYLSPYLSSLGSNFKHGADFA 108
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 35.4 bits (80), Expect = 0.055 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%) Frame = +3 Query: 201 AIFSFGDSFSDTGN----FVIINSGKLPNMPKFPPPYA--RCSNGRLVIDFLAEALGVPL 362 A+F FGDS DTGN + P FP A R SNGR+ D++++ LGV Sbjct: 125 AVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGVKE 184 Query: 363 LPPS 374 + P+ Sbjct: 185 IVPA 188
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 34.7 bits (78), Expect = 0.094 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 6/64 (9%) Frame = +3 Query: 201 AIFSFGDSFSDTGNFVIINSGKLPNMP------KFPPPYARCSNGRLVIDFLAEALGVPL 362 A+F FGDS DTGN + + N KF R SNG + D+LA+ +GV Sbjct: 204 AVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGVKE 263 Query: 363 LPPS 374 + P+ Sbjct: 264 IVPA 267
>HLT_VIBPA (Q99289) Thermolabile hemolysin precursor (TL) (Lecithin-dependent| haemolysin) (LDH) (Atypical phospholipase) (Phospholipase A2) (Lysophospholipase) Length = 418 Score = 34.7 bits (78), Expect = 0.094 Identities = 19/59 (32%), Positives = 30/59 (50%) Frame = +3 Query: 186 PQYYNAIFSFGDSFSDTGNFVIINSGKLPNMPKFPPPYARCSNGRLVIDFLAEALGVPL 362 P N + + GDS SDTGN + + PN + SNG + +++A+A +PL Sbjct: 141 PDQINKVVALGDSLSDTGNIFNASQWRFPNPNSW--FLGHFSNGFVWTEYIAKAKNLPL 197
>GCAT_AERHY (P10480) Phosphatidylcholine-sterol acyltransferase precursor (EC| 2.3.1.43) (Glycerophospholipid-cholesterol acyltransferase) (GCAT) Length = 335 Score = 30.4 bits (67), Expect = 1.8 Identities = 19/48 (39%), Positives = 25/48 (52%) Frame = +3 Query: 195 YNAIFSFGDSFSDTGNFVIINSGKLPNMPKFPPPYARCSNGRLVIDFL 338 ++ I FGDS SDTG G LP+ P P R SNG + ++ L Sbjct: 25 FSRIVMFGDSLSDTGKMYSKMRGYLPSSP--PYYEGRFSNGPVWLEQL 70
>MMP9_CANFA (O18733) Matrix metalloproteinase-9 precursor (EC 3.4.24.35)| (MMP-9) (92 kDa type IV collagenase) (92 kDa gelatinase) (Gelatinase B) (GELB) Length = 704 Score = 28.9 bits (63), Expect = 5.2 Identities = 13/35 (37%), Positives = 15/35 (42%) Frame = -3 Query: 186 AAVPPTPWPKRRPDTGGCTTTASSPWSPPKLAPHQ 82 A PPT P RP G A+ P PP P + Sbjct: 466 ATGPPTTRPSERPTAGPTGPPAAGPTGPPTAGPSE 500
>ZCH11_HUMAN (Q5TAX3) Zinc finger CCHC domain-containing protein 11| Length = 1644 Score = 28.5 bits (62), Expect = 6.7 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = -3 Query: 174 PTPWPKRRPDTGGCTTTASSPWSPPKLAPHQ 82 P P+P+ + T +S P S PKL P Q Sbjct: 1430 PQPFPQNSSQSAAITQPSSQPGSQPKLGPPQ 1460
>RR4B_CYACA (O22029) Chloroplast 30S ribosomal protein S4| Length = 192 Score = 28.1 bits (61), Expect = 8.8 Identities = 10/33 (30%), Positives = 18/33 (54%) Frame = +3 Query: 231 DTGNFVIINSGKLPNMPKFPPPYARCSNGRLVI 329 + + + + S P P++ PPY + SNG L + Sbjct: 133 EVNHVIEVKSSSPPKPPEYLPPYLQLSNGTLTV 165 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,650,734 Number of Sequences: 219361 Number of extensions: 690082 Number of successful extensions: 2657 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2506 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2646 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)