Clone Name | bart08b01 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009541.1| Triticum aestivum clone wr1.pk0152.a12:fis, full insert mRNA sequence Length = 933 Score = 519 bits (262), Expect = e-144 Identities = 279/285 (97%) Strand = Plus / Plus Query: 266 ccgacctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatct 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8 ccgacctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatct 67 Query: 326 gcaccgggaacctctgcatcaaggaagttcacgactaccttaaaagcctttgtcctgatc 385 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 68 gcaccgggaacctctgcatcaaggaagttcacgactaccttaaaagcctctgtcctgatc 127 Query: 386 tccacattaccagaggtgaatatgatgaggatgctcgttacccagagactaanacagtta 445 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 128 tccacattaccagaggtgaatatgatgaggatgctcgctacccagagactaagacagtta 187 Query: 446 ctattggccagttcaagctagggctatgccatggccatcaggttgttccatggggcgacc 505 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 ctattggtcagttcaagctagggctatgccatggccatcaggttgttccatggggcgacc 247 Query: 506 tggactccctagcgatgcttcagcggcagctggatgtggacatcc 550 ||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 248 tggactccctagcgatgctccagaggcagctggatgtggacatcc 292
>dbj|AK071757.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113N03, full insert sequence Length = 944 Score = 458 bits (231), Expect = e-126 Identities = 308/334 (92%) Strand = Plus / Plus Query: 217 atggtgctggtcttggcgctgggcgatctgcacatcccgcaccgtgcgcccgacctgccc 276 ||||||||||| | ||||| || ||||||||| | |||||||| ||| |||||||||| Sbjct: 176 atggtgctggtgctcgcgctcggggatctgcacgtgccgcaccgggcggccgacctgccg 235 Query: 277 gccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcaccgggaac 336 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 236 gccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcacggggaac 295 Query: 337 ctctgcatcaaggaagttcacgactaccttaaaagcctttgtcctgatctccacattacc 396 |||||||||||||||||||| |||||||| ||||||||||||||||||||||| || ||| Sbjct: 296 ctctgcatcaaggaagttcatgactacctgaaaagcctttgtcctgatctccatataacc 355 Query: 397 agaggtgaatatgatgaggatgctcgttacccagagactaanacagttactattggccag 456 ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||| Sbjct: 356 agaggtgaatatgatgaggatgctcgttacccagagactaagacacttactattggtcag 415 Query: 457 ttcaagctagggctatgccatggccatcaggttgttccatggggcgacctggactcccta 516 |||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 416 ttcaagctagggctgtgccatggtcatcaggttgttccatggggcgatttggactccctg 475 Query: 517 gcgatgcttcagcggcagctggatgtggacatcc 550 |||||||| || ||||||||||| |||||||||| Sbjct: 476 gcgatgctccaacggcagctggacgtggacatcc 509
>dbj|AK060027.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D07, full insert sequence Length = 1047 Score = 458 bits (231), Expect = e-126 Identities = 308/334 (92%) Strand = Plus / Plus Query: 217 atggtgctggtcttggcgctgggcgatctgcacatcccgcaccgtgcgcccgacctgccc 276 ||||||||||| | ||||| || ||||||||| | |||||||| ||| |||||||||| Sbjct: 279 atggtgctggtgctcgcgctcggggatctgcacgtgccgcaccgggcggccgacctgccg 338 Query: 277 gccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcaccgggaac 336 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 339 gccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcacggggaac 398 Query: 337 ctctgcatcaaggaagttcacgactaccttaaaagcctttgtcctgatctccacattacc 396 |||||||||||||||||||| |||||||| ||||||||||||||||||||||| || ||| Sbjct: 399 ctctgcatcaaggaagttcatgactacctgaaaagcctttgtcctgatctccatataacc 458 Query: 397 agaggtgaatatgatgaggatgctcgttacccagagactaanacagttactattggccag 456 ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||| Sbjct: 459 agaggtgaatatgatgaggatgctcgttacccagagactaagacacttactattggtcag 518 Query: 457 ttcaagctagggctatgccatggccatcaggttgttccatggggcgacctggactcccta 516 |||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 519 ttcaagctagggctgtgccatggtcatcaggttgttccatggggcgatttggactccctg 578 Query: 517 gcgatgcttcagcggcagctggatgtggacatcc 550 |||||||| || ||||||||||| |||||||||| Sbjct: 579 gcgatgctccaacggcagctggacgtggacatcc 612
>gb|AY104320.1| Zea mays PCO068338 mRNA sequence Length = 1026 Score = 420 bits (212), Expect = e-114 Identities = 292/319 (91%) Strand = Plus / Plus Query: 232 gcgctgggcgatctgcacatcccgcaccgtgcgcccgacctgcccgccaagttcaagtcc 291 |||||||| |||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 272 gcgctgggggatctgcacatcccgcaccgggcgcccgacctccccgccaaattcaagtcc 331 Query: 292 atgctcgtcccgggcaagatccagcacatcatctgcaccgggaacctctgcatcaaggaa 351 |||||||| || ||||||||||| |||||||||||||| || || ||||||||||||||| Sbjct: 332 atgctcgtgcccggcaagatccaacacatcatctgcactggcaatctctgcatcaaggaa 391 Query: 352 gttcacgactaccttaaaagcctttgtcctgatctccacattaccagaggtgaatatgat 411 || || |||||||| ||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct: 392 gtccatgactacctgaaaagcctttgccctgatctccatattaccagaggtgaacatgat 451 Query: 412 gaggatgctcgttacccagagactaanacagttactattggccagttcaagctagggcta 471 ||||||||||| |||||||||||||| ||| |||| ||||| ||||| ||||| ||||| Sbjct: 452 gaggatgctcgatacccagagactaagacacttacaattggtcagtttaagcttgggctg 511 Query: 472 tgccatggccatcaggttgttccatggggcgacctggactccctagcgatgcttcagcgg 531 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 512 tgccatggccatcaggttgttccatggggcgacctggactccctggcgatgctccagcgg 571 Query: 532 cagctggatgtggacatcc 550 |||||||| |||||||||| Sbjct: 572 cagctggacgtggacatcc 590
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 214 bits (108), Expect = 2e-52 Identities = 134/143 (93%) Strand = Plus / Minus Query: 347 aggaagttcacgactaccttaaaagcctttgtcctgatctccacattaccagaggtgaat 406 |||||||||| |||||||| ||||||||||||||||||||||| || ||||||||||||| Sbjct: 9459954 aggaagttcatgactacctgaaaagcctttgtcctgatctccatataaccagaggtgaat 9459895 Query: 407 atgatgaggatgctcgttacccagagactaanacagttactattggccagttcaagctag 466 ||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||| Sbjct: 9459894 atgatgaggatgctcgttacccagagactaagacacttactattggtcagttcaagctag 9459835 Query: 467 ggctatgccatggccatcaggtt 489 |||| |||||||| ||||||||| Sbjct: 9459834 ggctgtgccatggtcatcaggtt 9459812 Score = 176 bits (89), Expect = 5e-41 Identities = 122/133 (91%) Strand = Plus / Minus Query: 217 atggtgctggtcttggcgctgggcgatctgcacatcccgcaccgtgcgcccgacctgccc 276 ||||||||||| | ||||| || ||||||||| | |||||||| ||| |||||||||| Sbjct: 9462582 atggtgctggtgctcgcgctcggggatctgcacgtgccgcaccgggcggccgacctgccg 9462523 Query: 277 gccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcaccgggaac 336 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9462522 gccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcacggggaac 9462463 Query: 337 ctctgcatcaagg 349 ||||||||||||| Sbjct: 9462462 ctctgcatcaagg 9462450 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 481 catcaggttgttccatggggcgacctggactccctagcgatgcttcagcggcagctggat 540 ||||||||||||||||||||||| |||||||||| |||||||| || ||||||||||| Sbjct: 9458049 catcaggttgttccatggggcgatttggactccctggcgatgctccaacggcagctggac 9457990 Query: 541 gtggacatcc 550 |||||||||| Sbjct: 9457989 gtggacatcc 9457980
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0006C08 Length = 151987 Score = 214 bits (108), Expect = 2e-52 Identities = 134/143 (93%) Strand = Plus / Minus Query: 347 aggaagttcacgactaccttaaaagcctttgtcctgatctccacattaccagaggtgaat 406 |||||||||| |||||||| ||||||||||||||||||||||| || ||||||||||||| Sbjct: 73515 aggaagttcatgactacctgaaaagcctttgtcctgatctccatataaccagaggtgaat 73456 Query: 407 atgatgaggatgctcgttacccagagactaanacagttactattggccagttcaagctag 466 ||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||| Sbjct: 73455 atgatgaggatgctcgttacccagagactaagacacttactattggtcagttcaagctag 73396 Query: 467 ggctatgccatggccatcaggtt 489 |||| |||||||| ||||||||| Sbjct: 73395 ggctgtgccatggtcatcaggtt 73373 Score = 176 bits (89), Expect = 5e-41 Identities = 122/133 (91%) Strand = Plus / Minus Query: 217 atggtgctggtcttggcgctgggcgatctgcacatcccgcaccgtgcgcccgacctgccc 276 ||||||||||| | ||||| || ||||||||| | |||||||| ||| |||||||||| Sbjct: 76143 atggtgctggtgctcgcgctcggggatctgcacgtgccgcaccgggcggccgacctgccg 76084 Query: 277 gccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcaccgggaac 336 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 76083 gccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcacggggaac 76024 Query: 337 ctctgcatcaagg 349 ||||||||||||| Sbjct: 76023 ctctgcatcaagg 76011 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 481 catcaggttgttccatggggcgacctggactccctagcgatgcttcagcggcagctggat 540 ||||||||||||||||||||||| |||||||||| |||||||| || ||||||||||| Sbjct: 71610 catcaggttgttccatggggcgatttggactccctggcgatgctccaacggcagctggac 71551 Query: 541 gtggacatcc 550 |||||||||| Sbjct: 71550 gtggacatcc 71541
>gb|BT013890.1| Lycopersicon esculentum clone 132875R, mRNA sequence Length = 951 Score = 71.9 bits (36), Expect = 2e-09 Identities = 125/155 (80%) Strand = Plus / Plus Query: 373 ctttgtcctgatctccacattaccagaggtgaatatgatgaggatgctcgttacccagag 432 ||||||||||| | || ||||| ||||| || ||||| ||||| | |||||||| ||| Sbjct: 326 ctttgtcctgacttgcatattactagaggcgagtatgacgaggagacacgttaccctgag 385 Query: 433 actaanacagttactattggccagttcaagctagggctatgccatggccatcaggttgtt 492 ||||| || | || ||||| || || ||||| || | ||||||||||| ||||||||| Sbjct: 386 actaagactctaacgattggtcaatttaagcttggattgtgccatggccaccaggttgtt 445 Query: 493 ccatggggcgacctggactccctagcgatgcttca 527 |||||||| ||| ||||||| |||| |||||||| Sbjct: 446 ccatggggtgacttggactcattagccatgcttca 480
>gb|AC137995.31| Medicago truncatula clone mth2-11j1, complete sequence Length = 146749 Score = 69.9 bits (35), Expect = 8e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 217 atggtgctggtcttggcgctgggcgatctgcacatcccgcaccgtgcgcccgacctgccc 276 ||||||||||||||||| || || ||| ||||||| || || | ||||| || | || Sbjct: 53843 atggtgctggtcttggccctaggggatatgcacataccccatagggcgcctgatattcct 53902 Query: 277 gccaagttcaagtccatgctcgtcccgggcaagatccagcacatcat 323 || |||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 53903 gcgaagttcaaatccatgcttgtccctggcaagatccagcacatcat 53949 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 485 aggttgttccatggggcgacctggactccctagcgatgcttcagcggcagctggatgt 542 ||||| |||||||||| ||||||||||| || |||||||| ||| | ||||| ||||| Sbjct: 55697 aggttattccatggggagacctggactcgctggcgatgctacagagacagcttgatgt 55754
>emb|CR671769.2|CNS0FHB3 Tetraodon nigroviridis full-length cDNA Length = 973 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 107 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 166 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 167 gggcaacctttgcaccaagga 187
>emb|CR711646.2|CNS0GC22 Tetraodon nigroviridis full-length cDNA Length = 921 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 104 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 163 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 164 gggcaacctttgcaccaagga 184
>emb|CR722004.2|CNS0GK1M Tetraodon nigroviridis full-length cDNA Length = 952 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 86 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 145 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 146 gggcaacctttgcaccaagga 166
>emb|CR721420.2|CNS0GJLE Tetraodon nigroviridis full-length cDNA Length = 991 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 124 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 183 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 184 gggcaacctttgcaccaagga 204
>emb|CR720838.2|CNS0GJ58 Tetraodon nigroviridis full-length cDNA Length = 964 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 94 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 153 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 154 gggcaacctttgcaccaagga 174
>emb|CR719171.2|CNS0GHUX Tetraodon nigroviridis full-length cDNA Length = 1006 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 135 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 194 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 195 gggcaacctttgcaccaagga 215
>emb|CR710014.2|CNS0GASQ Tetraodon nigroviridis full-length cDNA Length = 1007 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 135 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 194 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 195 gggcaacctttgcaccaagga 215
>emb|CR705376.2|CNS0G77W Tetraodon nigroviridis full-length cDNA Length = 963 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 95 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 154 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 155 gggcaacctttgcaccaagga 175
>emb|CR704003.2|CNS0G65R Tetraodon nigroviridis full-length cDNA Length = 971 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 110 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 169 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 170 gggcaacctttgcaccaagga 190
>emb|CR703977.2|CNS0G651 Tetraodon nigroviridis full-length cDNA Length = 968 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 94 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 153 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 154 gggcaacctttgcaccaagga 174
>emb|CR703359.2|CNS0G5NV Tetraodon nigroviridis full-length cDNA Length = 955 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 104 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 163 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 164 gggcaacctttgcaccaagga 184
>emb|CR702365.2|CNS0G4W9 Tetraodon nigroviridis full-length cDNA Length = 970 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 98 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 157 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 158 gggcaacctttgcaccaagga 178
>emb|CR701981.2|CNS0G4LL Tetraodon nigroviridis full-length cDNA Length = 958 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 92 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 151 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 152 gggcaacctttgcaccaagga 172
>emb|CR700748.2|CNS0G3NC Tetraodon nigroviridis full-length cDNA Length = 966 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 98 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 157 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 158 gggcaacctttgcaccaagga 178
>emb|CR699247.2|CNS0G2HN Tetraodon nigroviridis full-length cDNA Length = 977 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 110 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 169 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 170 gggcaacctttgcaccaagga 190
>emb|CR699075.2|CNS0G2CV Tetraodon nigroviridis full-length cDNA Length = 959 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 92 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 151 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 152 gggcaacctttgcaccaagga 172
>emb|CR698290.2|CNS0G1R2 Tetraodon nigroviridis full-length cDNA Length = 919 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 56 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 115 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 116 gggcaacctttgcaccaagga 136
>emb|CR698039.2|CNS0G1K3 Tetraodon nigroviridis full-length cDNA Length = 958 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 95 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 154 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 155 gggcaacctttgcaccaagga 175
>emb|CR697819.2|CNS0G1DZ Tetraodon nigroviridis full-length cDNA Length = 922 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 56 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 115 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 116 gggcaacctttgcaccaagga 136
>emb|CR697125.2|CNS0G0UP Tetraodon nigroviridis full-length cDNA Length = 977 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 107 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 166 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 167 gggcaacctttgcaccaagga 187
>emb|CR695702.2|CNS0FZR6 Tetraodon nigroviridis full-length cDNA Length = 1073 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 211 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 270 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 271 gggcaacctttgcaccaagga 291
>emb|CR694882.2|CNS0FZ4E Tetraodon nigroviridis full-length cDNA Length = 1074 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 211 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 270 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 271 gggcaacctttgcaccaagga 291
>emb|CR694286.2|CNS0FYNU Tetraodon nigroviridis full-length cDNA Length = 911 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 56 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 115 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 116 gggcaacctttgcaccaagga 136
>emb|CR691939.2|CNS0FWUN Tetraodon nigroviridis full-length cDNA Length = 922 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 56 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 115 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 116 gggcaacctttgcaccaagga 136
>emb|CR686809.2|CNS0FSW5 Tetraodon nigroviridis full-length cDNA Length = 938 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 94 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 153 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 154 gggcaacctttgcaccaagga 174
>emb|CR682944.2|CNS0FPWS Tetraodon nigroviridis full-length cDNA Length = 948 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 81 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 140 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 141 gggcaacctttgcaccaagga 161
>emb|CR680170.2|CNS0FNRQ Tetraodon nigroviridis full-length cDNA Length = 960 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 94 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 153 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 154 gggcaacctttgcaccaagga 174
>emb|CR680159.2|CNS0FNRF Tetraodon nigroviridis full-length cDNA Length = 971 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 107 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 166 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 167 gggcaacctttgcaccaagga 187
>emb|CR677673.2|CNS0FLUQ Tetraodon nigroviridis full-length cDNA Length = 978 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 107 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 166 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 167 gggcaacctttgcaccaagga 187
>emb|CR672752.2|CNS0FI2E Tetraodon nigroviridis full-length cDNA Length = 979 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 108 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 167 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 168 gggcaacctttgcaccaagga 188
>emb|CR644333.2|CNS0EW4Z Tetraodon nigroviridis full-length cDNA Length = 964 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 92 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 151 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 152 gggcaacctttgcaccaagga 172
>ref|NM_019780.1| Mus musculus vacuolar protein sorting 29 (S. pombe) (Vps29), mRNA Length = 991 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 310 atccagcacatcatctgcaccgggaacctctgcatcaagga 350 |||||||||||| |||||||||| |||||||||| |||||| Sbjct: 152 atccagcacatcctctgcaccggcaacctctgcaccaagga 192
>gb|AC113285.9| Mus musculus chromosome 5, clone RP23-407I6, complete sequence Length = 283052 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 310 atccagcacatcatctgcaccgggaacctctgcatcaagga 350 |||||||||||| |||||||||| |||||||||| |||||| Sbjct: 214663 atccagcacatcctctgcaccggcaacctctgcaccaagga 214623
>emb|CR721433.2|CNS0GJLR Tetraodon nigroviridis full-length cDNA Length = 962 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||| ||||||||||| ||||||| Sbjct: 95 cctgcccgccaagttcaagaagctgttggtcccggggaaggtccagcacatcctctgcac 154 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 155 gggcaacctttgcaccaagga 175
>emb|CR693428.2|CNS0FY00 Tetraodon nigroviridis full-length cDNA Length = 1006 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 135 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 194 Query: 330 cgggaacctctgcatcaagga 350 | ||||| |||| |||||| Sbjct: 195 atgcaacctttgcaccaagga 215
>emb|CR691606.2|CNS0FWLE Tetraodon nigroviridis full-length cDNA Length = 1006 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| ||||||||||||||| ||||||| Sbjct: 135 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcacatcctctgcac 194 Query: 330 cgggaacctctgcatcaagga 350 | ||||| |||| |||||| Sbjct: 195 atgcaacctttgcaccaagga 215
>emb|CR684244.2|CNS0FQWW Tetraodon nigroviridis full-length cDNA Length = 957 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 270 cctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcac 329 ||||||||||||||||||| || | |||||||| |||||||||| |||| ||||||| Sbjct: 92 cctgcccgccaagttcaagaagctgttggtcccggggaagatccagcgcatcctctgcac 151 Query: 330 cgggaacctctgcatcaagga 350 || ||||| |||| |||||| Sbjct: 152 gggcaacctttgcaccaagga 172
>gb|BC005663.1| Mus musculus vacuolar protein sorting 29 (S. pombe), mRNA (cDNA clone MGC:11606 IMAGE:2645432), complete cds Length = 985 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 310 atccagcacatcatctgcaccgggaacctctgcatcaagga 350 |||||||||||| |||||||||| |||||||||| |||||| Sbjct: 141 atccagcacatcctctgcaccggcaacctctgcaccaagga 181
>dbj|AK150330.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830003B15 product:vacuolar protein sorting 29 (S. pombe), full insert sequence Length = 984 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 310 atccagcacatcatctgcaccgggaacctctgcatcaagga 350 |||||||||||| |||||||||| |||||||||| |||||| Sbjct: 162 atccagcacatcctctgcaccggcaacctctgcaccaagga 202
>dbj|AK036426.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830106E01 product:vacuolar protein sorting 29 (S. pombe), full insert sequence Length = 2036 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 310 atccagcacatcatctgcaccgggaacctctgcatcaagga 350 |||||||||||| |||||||||| |||||||||| |||||| Sbjct: 140 atccagcacatcctctgcaccggcaacctctgcaccaagga 180
>dbj|AK008248.1| Mus musculus adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010015D08 product:vacuolar protein sorting 29 (S. pombe), full insert sequence Length = 994 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 310 atccagcacatcatctgcaccgggaacctctgcatcaagga 350 |||||||||||| |||||||||| |||||||||| |||||| Sbjct: 172 atccagcacatcctctgcaccggcaacctctgcaccaagga 212
>dbj|AK004103.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110035A10 product:vacuolar protein sorting 29 (S. pombe), full insert sequence Length = 699 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 310 atccagcacatcatctgcaccgggaacctctgcatcaagga 350 |||||||||||| |||||||||| |||||||||| |||||| Sbjct: 169 atccagcacatcctctgcaccggcaacctctgcaccaagga 209
>gb|AF193794.1|AF193794 Mus musculus vacuolar sorting protein VPS29 mRNA, complete cds Length = 991 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 310 atccagcacatcatctgcaccgggaacctctgcatcaagga 350 |||||||||||| |||||||||| |||||||||| |||||| Sbjct: 152 atccagcacatcctctgcaccggcaacctctgcaccaagga 192
>emb|AJ720772.1| Gallus gallus mRNA for hypothetical protein, clone 25e21 Length = 2134 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 307 aagatccagcacatcatctgcaccgggaacctctgcatcaagga 350 ||||||||||||||| ||||||| || |||||||||| |||||| Sbjct: 135 aagatccagcacatcctctgcacgggaaacctctgcaccaagga 178
>ref|NM_001007837.1| Gallus gallus vacuolar protein sorting 29 (yeast) (VPS29), mRNA Length = 2134 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 307 aagatccagcacatcatctgcaccgggaacctctgcatcaagga 350 ||||||||||||||| ||||||| || |||||||||| |||||| Sbjct: 135 aagatccagcacatcctctgcacgggaaacctctgcaccaagga 178
>emb|CR352820.1| Gallus gallus finished cDNA, clone ChEST121b6 Length = 1074 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 307 aagatccagcacatcatctgcaccgggaacctctgcatcaagga 350 ||||||||||||||| ||||||| || |||||||||| |||||| Sbjct: 350 aagatccagcacatcctctgcacgggaaacctctgcaccaagga 393
>gb|DQ216353.1| Taeniopygia guttata clone 0058P0018D01 vacuolar protein sorting 29-like mRNA, complete sequence Length = 1545 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 304 ggcaagatccagcacatcatctgcaccgggaacctctgcatcaagga 350 ||||||||||| |||||| | ||||| ||||||||||||| |||||| Sbjct: 131 ggcaagatccaacacatcctgtgcacagggaacctctgcaccaagga 177
>gb|DQ216352.1| Taeniopygia guttata clone 0061P0002F04 vacuolar protein sorting 29-like mRNA, complete sequence Length = 843 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 304 ggcaagatccagcacatcatctgcaccgggaacctctgcatcaagga 350 ||||||||||| |||||| | ||||| ||||||||||||| |||||| Sbjct: 131 ggcaagatccaacacatcctgtgcacagggaacctctgcaccaagga 177
>gb|DQ216351.1| Taeniopygia guttata clone 0064P0015C07 vacuolar protein sorting 29-like mRNA, complete sequence Length = 1450 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 304 ggcaagatccagcacatcatctgcaccgggaacctctgcatcaagga 350 ||||||||||| |||||| | ||||| ||||||||||||| |||||| Sbjct: 125 ggcaagatccaacacatcctgtgcacagggaacctctgcaccaagga 171
>gb|DQ216350.1| Taeniopygia guttata clone 0058P0037A03 vacuolar protein sorting 29-like mRNA, complete sequence Length = 1543 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 304 ggcaagatccagcacatcatctgcaccgggaacctctgcatcaagga 350 ||||||||||| |||||| | ||||| ||||||||||||| |||||| Sbjct: 126 ggcaagatccaacacatcctgtgcacagggaacctctgcaccaagga 172
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 32 ttgaaacggaggcaaagattgcctc 56 ||||||||||||||||||||||||| Sbjct: 214634 ttgaaacggaggcaaagattgcctc 214610
>ref|NM_114649.3| Arabidopsis thaliana hydrolase/ protein serine/threonine phosphatase AT3G47810 transcript variant AT3G47810.1 mRNA, complete cds Length = 1445 Score = 48.1 bits (24), Expect = 0.031 Identities = 57/68 (83%) Strand = Plus / Plus Query: 280 aagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcaccgggaacctc 339 |||||||| || ||||| || || || ||||| || |||||||||||||| || || ||| Sbjct: 174 aagttcaaatcaatgcttgttcctgggaagattcaacacatcatctgcactggaaatctc 233 Query: 340 tgcatcaa 347 |||||||| Sbjct: 234 tgcatcaa 241
>ref|NM_202670.1| Arabidopsis thaliana protein serine/threonine phosphatase AT3G47810 transcript variant AT3G47810.2 mRNA, complete cds Length = 1490 Score = 48.1 bits (24), Expect = 0.031 Identities = 57/68 (83%) Strand = Plus / Plus Query: 280 aagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcaccgggaacctc 339 |||||||| || ||||| || || || ||||| || |||||||||||||| || || ||| Sbjct: 218 aagttcaaatcaatgcttgttcctgggaagattcaacacatcatctgcactggaaatctc 277 Query: 340 tgcatcaa 347 |||||||| Sbjct: 278 tgcatcaa 285
>ref|NM_202671.1| Arabidopsis thaliana hydrolase/ protein serine/threonine phosphatase AT3G47810 transcript variant AT3G47810.3 mRNA, complete cds Length = 1497 Score = 48.1 bits (24), Expect = 0.031 Identities = 57/68 (83%) Strand = Plus / Plus Query: 280 aagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcaccgggaacctc 339 |||||||| || ||||| || || || ||||| || |||||||||||||| || || ||| Sbjct: 226 aagttcaaatcaatgcttgttcctgggaagattcaacacatcatctgcactggaaatctc 285 Query: 340 tgcatcaa 347 |||||||| Sbjct: 286 tgcatcaa 293
>emb|AL049746.1|ATT23J7 Arabidopsis thaliana DNA chromosome 3, BAC clone T23J7 Length = 92493 Score = 48.1 bits (24), Expect = 0.031 Identities = 57/68 (83%) Strand = Plus / Minus Query: 280 aagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcaccgggaacctc 339 |||||||| || ||||| || || || ||||| || |||||||||||||| || || ||| Sbjct: 63119 aagttcaaatcaatgcttgttcctgggaagattcaacacatcatctgcactggaaatctc 63060 Query: 340 tgcatcaa 347 |||||||| Sbjct: 63059 tgcatcaa 63052
>gb|BT004347.1| Arabidopsis thaliana clone U20137 unknown protein (At3g47810) mRNA, complete cds Length = 604 Score = 48.1 bits (24), Expect = 0.031 Identities = 57/68 (83%) Strand = Plus / Plus Query: 280 aagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcaccgggaacctc 339 |||||||| || ||||| || || || ||||| || |||||||||||||| || || ||| Sbjct: 64 aagttcaaatcaatgcttgttcctgggaagattcaacacatcatctgcactggaaatctc 123 Query: 340 tgcatcaa 347 |||||||| Sbjct: 124 tgcatcaa 131
>gb|BT002774.1| Arabidopsis thaliana clone RAFL14-87-C24 (R20137) unknown protein (At3g47810) mRNA, complete cds Length = 816 Score = 48.1 bits (24), Expect = 0.031 Identities = 57/68 (83%) Strand = Plus / Plus Query: 280 aagttcaagtccatgctcgtcccgggcaagatccagcacatcatctgcaccgggaacctc 339 |||||||| || ||||| || || || ||||| || |||||||||||||| || || ||| Sbjct: 174 aagttcaaatcaatgcttgttcctgggaagattcaacacatcatctgcactggaaatctc 233 Query: 340 tgcatcaa 347 |||||||| Sbjct: 234 tgcatcaa 241
>gb|AC158204.2| Physcomitrella patens clone JGIASYB-1A5, complete sequence Length = 34504 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 271 ctgcccgccaagttcaagtccatgctcgtcccgggcaagatccagcacatc 321 ||||| ||||||||||| || ||||| || ||||| ||||| ||||||||| Sbjct: 8539 ctgcctgccaagttcaaatctatgctagtgccgggaaagattcagcacatc 8589
>ref|XM_312630.2| Anopheles gambiae str. PEST ENSANGP00000015419 (ENSANGG00000012930), mRNA Length = 752 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 310 atccagcacatcatctgcaccgggaacctctgca 343 ||||| |||||| |||||||||||||||| |||| Sbjct: 279 atccatcacatcctctgcaccgggaacctgtgca 312
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 gcgctgggcgatctgcacatc 252 ||||||||||||||||||||| Sbjct: 5851940 gcgctgggcgatctgcacatc 5851920
>gb|DQ443435.1| Bombyx mori vacuolar protein sorting 29 isoform 2 mRNA, complete cds Length = 702 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 530 ggcagctggatgtggacatcc 550 ||||||||||||||||||||| Sbjct: 455 ggcagctggatgtggacatcc 475
>gb|AC144714.4| Mus musculus BAC clone RP24-371M20 from chromosome 8, complete sequence Length = 176994 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 attaccagaggtgaatatgat 411 ||||||||||||||||||||| Sbjct: 99729 attaccagaggtgaatatgat 99749
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 gctggtcttggcgctgggcga 242 ||||||||||||||||||||| Sbjct: 124537 gctggtcttggcgctgggcga 124517
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 gctggtcttggcgctgggcga 242 ||||||||||||||||||||| Sbjct: 197544 gctggtcttggcgctgggcga 197524
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 gctggtcttggcgctgggcga 242 ||||||||||||||||||||| Sbjct: 12139 gctggtcttggcgctgggcga 12119
>dbj|AP006430.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT33L13, TM0327, complete sequence Length = 105384 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 400 ggtgaatatgatgaggatgct 420 ||||||||||||||||||||| Sbjct: 26718 ggtgaatatgatgaggatgct 26738
>gb|AC129093.34| Mus musculus strain C57BL/6J clone rp23-198m10 map 19, complete sequence Length = 190697 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ctaggagagcagagcgggct 163 |||||||||||||||||||| Sbjct: 93107 ctaggagagcagagcgggct 93126
>ref|NM_124559.2| Arabidopsis thaliana unknown protein AT5G51800 mRNA, complete cds Length = 3151 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 tttgtcctgatctccacatt 393 |||||||||||||||||||| Sbjct: 828 tttgtcctgatctccacatt 809
>gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, complete sequence Length = 355714 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ctgcacatcccgcaccgtgc 263 |||||||||||||||||||| Sbjct: 180600 ctgcacatcccgcaccgtgc 180619
>gb|AC115967.11| Mus musculus chromosome 8, clone RP24-72G22, complete sequence Length = 221435 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tcacacaaccacacaaccac 195 |||||||||||||||||||| Sbjct: 69101 tcacacaaccacacaaccac 69082
>ref|XM_870004.1| PREDICTED: Bos taurus similar to Complement C4 precursor (LOC617696), partial mRNA Length = 4757 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 gccatggccatcaggttgtt 492 |||||||||||||||||||| Sbjct: 2962 gccatggccatcaggttgtt 2943
>gb|AY015556.1| Uncultured sulfate-reducing bacterium UMTRAdsr648-20 dissimilatory sulfite reductase subunit A (dsrA) gene, partial cds Length = 363 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ccgacctgcccgccaagttc 285 |||||||||||||||||||| Sbjct: 17 ccgacctgcccgccaagttc 36
>ref|XM_817147.1| Leishmania major strain Friedlin RNA-editing complex protein MP81 (LMJ_0126) partial mRNA Length = 2970 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 ctgcacatcccgcaccgtgc 263 |||||||||||||||||||| Sbjct: 2619 ctgcacatcccgcaccgtgc 2600
>emb|Z81129.1|CET23F1 Caenorhabditis elegans Cosmid T23F1, complete sequence Length = 25345 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 catcaagcttcccaaatctatcaa 85 ||||||||||||||| |||||||| Sbjct: 9936 catcaagcttcccaactctatcaa 9913
>gb|AY437498.1| Trypanosoma cruzi MP81 gene, complete cds Length = 2970 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 ctgcacatcccgcaccgtgc 263 |||||||||||||||||||| Sbjct: 2619 ctgcacatcccgcaccgtgc 2600
>gb|AY437481.1| Leishmania major MP81 gene, complete cds Length = 2970 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 ctgcacatcccgcaccgtgc 263 |||||||||||||||||||| Sbjct: 2619 ctgcacatcccgcaccgtgc 2600
>emb|AL138718.17| Human DNA sequence from clone RP11-127P7 on chromosome 6 Contains a novel gene, a mitochondrial ribosomal protein L35 (MRPL35) pseudogene and a CpG island, complete sequence Length = 108813 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 caatggtgctggtcttggcg 234 |||||||||||||||||||| Sbjct: 33777 caatggtgctggtcttggcg 33796
>gb|AY230444.1| Gibberella moniliformis kinesin (KLP8) gene, complete cds Length = 3319 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gagagcagagcgggctgagg 167 |||||||||||||||||||| Sbjct: 1840 gagagcagagcgggctgagg 1859
>emb|Z99123.2|BSUB0020 Bacillus subtilis complete genome (section 20 of 21): from 3809641 to 4010779 Length = 201139 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 ccgcgatctccaatcaaatc 214 |||||||||||||||||||| Sbjct: 70492 ccgcgatctccaatcaaatc 70473
>emb|X73124.1|BSGENR B.subtilis genomic region (325 to 333) Length = 97015 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 ccgcgatctccaatcaaatc 214 |||||||||||||||||||| Sbjct: 76452 ccgcgatctccaatcaaatc 76471
>gb|AY955082.1| Equus caballus aldo-keto reductase mRNA, complete cds Length = 1562 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 gcctttgtcctgatctccac 390 |||||||||||||||||||| Sbjct: 1327 gcctttgtcctgatctccac 1346
>ref|NM_074447.2| Caenorhabditis elegans T23F1.5 (T23F1.5) mRNA, complete cds Length = 3820 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 catcaagcttcccaaatctatcaa 85 ||||||||||||||| |||||||| Sbjct: 2386 catcaagcttcccaactctatcaa 2409
>dbj|AB194695.1| Bacillus subtilis rocG gene for glutamate dehydrogenase, complete cds Length = 1388 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 ccgcgatctccaatcaaatc 214 |||||||||||||||||||| Sbjct: 912 ccgcgatctccaatcaaatc 931
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 319 atcatctgcaccgggaacctctgcatca 346 |||||||||||| |||| |||||||||| Sbjct: 234615 atcatctgcaccaggaagctctgcatca 234588
>dbj|AB010074.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIO24 Length = 86212 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 tttgtcctgatctccacatt 393 |||||||||||||||||||| Sbjct: 52921 tttgtcctgatctccacatt 52902
>ref|XM_315111.2| Anopheles gambiae str. PEST ENSANGP00000011447 (ENSANGG00000008958), partial mRNA Length = 2385 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tcacacaaccacacaaccac 195 |||||||||||||||||||| Sbjct: 1757 tcacacaaccacacaaccac 1738
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 tgctggtcttggcgctgggc 240 |||||||||||||||||||| Sbjct: 1241388 tgctggtcttggcgctgggc 1241407
>emb|CT027693.11| Mouse DNA sequence from clone RP24-120H1 on chromosome 16, complete sequence Length = 186376 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 cacacaaccacacaaccacc 196 |||||||||||||||||||| Sbjct: 15159 cacacaaccacacaaccacc 15140
>gb|L13695.1|AGLRPE Aglaothamnion neglectum R-phycoerythrin gamma-subunit mRNA, complete cds Length = 1273 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ccgcaccgtgcgcccgacct 272 |||||||||||||||||||| Sbjct: 794 ccgcaccgtgcgcccgacct 813
>gb|AC138106.9| Mus musculus chromosome 1, clone RP23-278C19, complete sequence Length = 173026 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 ctaggagagcagagcgggct 163 |||||||||||||||||||| Sbjct: 46103 ctaggagagcagagcgggct 46084 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,840,797 Number of Sequences: 3902068 Number of extensions: 3840797 Number of successful extensions: 72422 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 72085 Number of HSP's gapped (non-prelim): 303 length of query: 550 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 527 effective length of database: 17,143,297,704 effective search space: 9034517890008 effective search space used: 9034517890008 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)