Clone Name | bart08a12 |
---|---|
Clone Library Name | barley_pub |
>dbj|AB219525.1| Hordeum vulgare HvPIP2;4 mRNA for PIP aquaporin isoform, complete cds Length = 1343 Score = 63.9 bits (32), Expect = 2e-08 Identities = 35/36 (97%) Strand = Plus / Plus Query: 3 cccggcggggagtacgcggcccaggactactccgac 38 ||||||||||||||||||||| |||||||||||||| Sbjct: 101 cccggcggggagtacgcggccaaggactactccgac 136
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 ggcggggagtacgcggccc 24 ||||||||||||||||||| Sbjct: 177248 ggcggggagtacgcggccc 177230
>gb|AC044864.6| Mus musculus chromosome 3, clone RP23-168E14, complete sequence Length = 224119 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 gcggcccaggactactcc 35 |||||||||||||||||| Sbjct: 34810 gcggcccaggactactcc 34827
>gb|AC137525.3| Mus musculus BAC clone RP23-68H24 from chromosome 3, complete sequence Length = 203159 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 gcggcccaggactactcc 35 |||||||||||||||||| Sbjct: 182297 gcggcccaggactactcc 182314
>gb|AC116051.4| Mus musculus BAC clone RP23-4L11 from 3, complete sequence Length = 224674 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 gcggcccaggactactcc 35 |||||||||||||||||| Sbjct: 91944 gcggcccaggactactcc 91961
>gb|DQ127822.1| Aeromonas hydrophila strain PHP99 extracellular serine proteinase (ESP30) gene, complete cds Length = 2647 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 cccccggcggggagtacg 18 |||||||||||||||||| Sbjct: 1204 cccccggcggggagtacg 1221
>dbj|AK008852.1| Mus musculus adult male stomach cDNA, RIKEN full-length enriched library, clone:2210408E11 product:unclassifiable, full insert sequence Length = 981 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 18 gcggcccaggactactcc 35 |||||||||||||||||| Sbjct: 119 gcggcccaggactactcc 102
>dbj|AK007191.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700113A16 product:unclassifiable, full insert sequence Length = 564 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 18 gcggcccaggactactcc 35 |||||||||||||||||| Sbjct: 43 gcggcccaggactactcc 26
>gb|DQ189993.1| Aeromonas hydrophila strain XS91-4-1 extracellular serine protease-like (ahpA) gene, partial sequence Length = 1222 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 cccccggcggggagtacg 18 |||||||||||||||||| Sbjct: 1101 cccccggcggggagtacg 1118 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 127,075 Number of Sequences: 3902068 Number of extensions: 127075 Number of successful extensions: 24373 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 24356 Number of HSP's gapped (non-prelim): 17 length of query: 38 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 18 effective length of database: 17,155,003,908 effective search space: 308790070344 effective search space used: 308790070344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)