ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart08a11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_193122.1| Oryza sativa (japonica cultivar-group), mRNA 178 7e-42
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 86 8e-14
3dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic D... 86 8e-14
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.070
5gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare str... 46 0.070
6gb|AC134238.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.070
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.070
8dbj|AK100173.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.070
9dbj|AK059223.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.070
10dbj|AK067356.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.28
11dbj|AK142683.1| Mus musculus 10 days lactation, adult female mam... 42 1.1
12dbj|AK164795.1| Mus musculus 10 days lactation, adult female mam... 42 1.1
13dbj|AK164768.1| Mus musculus 10 days lactation, adult female mam... 42 1.1
14dbj|AK164767.1| Mus musculus 10 days lactation, adult female mam... 42 1.1
15dbj|AK164763.1| Mus musculus 10 days lactation, adult female mam... 42 1.1
16dbj|AK052780.1| Mus musculus 10 days lactation, adult female mam... 42 1.1
17dbj|AK021337.1| Mus musculus 10 days lactation, adult female mam... 42 1.1
18dbj|AK085747.1| Mus musculus 10 days lactation, adult female mam... 42 1.1
19dbj|AK085744.1| Mus musculus 10 days lactation, adult female mam... 42 1.1
20gb|AC074046.9|AC074046 Mus musculus 5 BAC RP23-440C1 (Roswell Pa... 42 1.1
21gb|BC002084.1| Mus musculus casein delta, mRNA (cDNA clone MGC:6... 42 1.1
22ref|NM_009973.1| Mus musculus casein delta (Csnd), mRNA 42 1.1
23emb|V00740.1|MMECAS Mouse messenger RNA for epsilon-casein 42 1.1
24gb|J00379.1|MUSECA mouse epsilon casein mrna 42 1.1
25gb|AC009253.17| Drosophila melanogaster clone BACR24F17, complet... 40 4.3
26ref|NM_116069.3| Arabidopsis thaliana catalytic/ hydrolase AT3G6... 40 4.3
27gb|BC083769.1| Rattus norvegicus cDNA clone IMAGE:7193220 40 4.3
28gb|BC105845.1| Rattus norvegicus cDNA clone MGC:125023 IMAGE:745... 40 4.3
29ref|XM_590020.2| PREDICTED: Bos taurus similar to DnaJ (Hsp40) h... 40 4.3
30ref|XM_878796.1| PREDICTED: Bos taurus similar to DnaJ (Hsp40) h... 40 4.3
31gb|AY089550.1| Drosophila melanogaster LD26837 full insert cDNA 40 4.3
32gb|AC158983.2| Mus musculus BAC clone RP23-264L8 from chromosome... 40 4.3
33gb|BT010899.1| Arabidopsis thaliana At3g62040 mRNA, complete cds 40 4.3
34gb|AC124401.3| Mus musculus BAC clone RP24-362C2 from chromosome... 40 4.3
35emb|AJ252018.1|DME252018 Drosophila melanogaster mRNA for mitoch... 40 4.3
36gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 4.3
37ref|NM_079969.2| Drosophila melanogaster Aconitase CG9244-RB (Ac... 40 4.3
38gb|AY051705.1| Drosophila melanogaster LD24561 full length cDNA 40 4.3
39gb|AC093099.1| Drosophila melanogaster, chromosome 2L, region 39... 40 4.3
40gb|AC026475.6|AC026475 Homo sapiens chromosome 16 clone RP11-71H... 40 4.3
41emb|BX822714.1|CNS0A7T1 Arabidopsis thaliana Full-length cDNA Co... 40 4.3
42gb|AE003669.5| Drosophila melanogaster chromosome 2L, section 78... 40 4.3
43gb|AC006574.1|AC006574 Drosophila melanogaster, chromosome 2R, r... 40 4.3
44gb|AC151478.1| Mus musculus BAC clone RP23-83K12 from 19, comple... 40 4.3
45emb|AL831738.4| Mouse DNA sequence from clone RP23-451K12 on chr... 40 4.3 
>ref|NM_193122.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 834

 Score =  178 bits (90), Expect = 7e-42
 Identities = 222/266 (83%)
 Strand = Plus / Plus

                                                                       
Query: 54  tgctgtttgacatggatgacaccatctaccccctgagcttgggaatcaacttagcatgcc 113
           ||||||||||||||||||| ||  | ||||| |||||||| |||||||||||||| ||||
Sbjct: 38  tgctgtttgacatggatgatactctgtacccactgagcttaggaatcaacttagcttgcc 97

                                                                       
Query: 114 gcaagaacatccaagactacatgctggacaaacttcagatcgaggagagcctggtcccca 173
           |||||||||| |||||||| |||||| |||| |||||||| || |||||||| || ||||
Sbjct: 98  gcaagaacatacaagactatatgctgaacaagcttcagattgaagagagccttgttccca 157

                                                                       
Query: 174 agatgtgcctagatttgtacagggaatacggaactacaatggccggtctgaaacttatgg 233
           ||||||| || ||| ||||||||||||  |||||||||||||| || |||||  |  |||
Sbjct: 158 agatgtgtcttgatctgtacagggaatttggaactacaatggctggactgaaggtcttgg 217

                                                                       
Query: 234 gctacgatttccactaccatgaattccacgccagcgtgcacggaaaactgccgtacgaga 293
           | || |||||| ||||  | || ||||||||  | || || || | | |||| |||||||
Sbjct: 218 gttatgatttcgactatgacgatttccacgcttgtgttcatggcacattgccatacgaga 277

                                     
Query: 294 agctgaagccggaccctgtcctgagg 319
           |||||||||| ||||||||| |||||
Sbjct: 278 agctgaagcctgaccctgtcttgagg 303
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 85/99 (85%)
 Strand = Plus / Minus

                                                                            
Query: 127      agactacatgctggacaaacttcagatcgaggagagcctggtccccaagatgtgcctaga 186
                |||||| |||||| |||| |||||||| || |||||||| || ||||||||||| || ||
Sbjct: 26275111 agactatatgctgaacaagcttcagattgaagagagccttgttcccaagatgtgtcttga 26275052

                                                       
Query: 187      tttgtacagggaatacggaactacaatggccggtctgaa 225
                | ||||||||||||  |||||||||||||| || |||||
Sbjct: 26275051 tctgtacagggaatttggaactacaatggctggactgaa 26275013



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                            
Query: 62       gacatggatgacaccatctaccccctgagcttgggaatcaacttagcatgccgcaagaac 121
                ||||||||||| ||  | ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 26275266 gacatggatgatactctgtacccactgagcttaggaatcaacttagcttgccgcaagaac 26275207

                       
Query: 122      atccaag 128
                || ||||
Sbjct: 26275206 atacaag 26275200



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                      
Query: 282      tgccgtacgagaagctgaagccggaccctgtcctgagg 319
                |||| ||||||||||||||||| ||||||||| |||||
Sbjct: 26274861 tgccatacgagaagctgaagcctgaccctgtcttgagg 26274824
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>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0455H11
          Length = 101607

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 85/99 (85%)
 Strand = Plus / Minus

                                                                         
Query: 127   agactacatgctggacaaacttcagatcgaggagagcctggtccccaagatgtgcctaga 186
             |||||| |||||| |||| |||||||| || |||||||| || ||||||||||| || ||
Sbjct: 49739 agactatatgctgaacaagcttcagattgaagagagccttgttcccaagatgtgtcttga 49680

                                                    
Query: 187   tttgtacagggaatacggaactacaatggccggtctgaa 225
             | ||||||||||||  |||||||||||||| || |||||
Sbjct: 49679 tctgtacagggaatttggaactacaatggctggactgaa 49641



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                         
Query: 62    gacatggatgacaccatctaccccctgagcttgggaatcaacttagcatgccgcaagaac 121
             ||||||||||| ||  | ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 49894 gacatggatgatactctgtacccactgagcttaggaatcaacttagcttgccgcaagaac 49835

                    
Query: 122   atccaag 128
             || ||||
Sbjct: 49834 atacaag 49828



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 282   tgccgtacgagaagctgaagccggaccctgtcctgagg 319
             |||| ||||||||||||||||| ||||||||| |||||
Sbjct: 49489 tgccatacgagaagctgaagcctgaccctgtcttgagg 49452
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                          
Query: 275     ggaaaactgccgtacgagaagctgaagccggaccctgtcctga 317
               |||| |||||| ||||||||  | |||||||||||||||||||
Sbjct: 9175856 ggaagactgccctacgagaacatcaagccggaccctgtcctga 9175898
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>gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0032O19, from chromosome 3, complete sequence
          Length = 142248

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 275    ggaaaactgccgtacgagaagctgaagccggaccctgtcctga 317
              |||| |||||| ||||||||  | |||||||||||||||||||
Sbjct: 110535 ggaagactgccctacgagaacatcaagccggaccctgtcctga 110493
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>gb|AC134238.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0016G06,
              complete sequence
          Length = 119910

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                         
Query: 275    ggaaaactgccgtacgagaagctgaagccggaccctgtcctga 317
              |||| |||||| ||||||||  | |||||||||||||||||||
Sbjct: 119036 ggaagactgccctacgagaacatcaagccggaccctgtcctga 119078
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                          
Query: 275     ggaaaactgccgtacgagaagctgaagccggaccctgtcctga 317
               |||| |||||| ||||||||  | |||||||||||||||||||
Sbjct: 9173689 ggaagactgccctacgagaacatcaagccggaccctgtcctga 9173731
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>dbj|AK100173.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026N03, full
           insert sequence
          Length = 1378

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 275 ggaaaactgccgtacgagaagctgaagccggaccctgtcctga 317
           |||| |||||| ||||||||  | |||||||||||||||||||
Sbjct: 432 ggaagactgccctacgagaacatcaagccggaccctgtcctga 474



 Score = 46.1 bits (23), Expect = 0.070
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 42  aatttgactgcctgctgtttgacatggatgacaccatctaccccctgagct 92
           |||| |||||||||||||||||| | ||||||||  | ||||| |||||||
Sbjct: 199 aattcgactgcctgctgtttgacctcgatgacactctgtacccactgagct 249
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>dbj|AK059223.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-D05, full
           insert sequence
          Length = 1314

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 275 ggaaaactgccgtacgagaagctgaagccggaccctgtcctga 317
           |||| |||||| ||||||||  | |||||||||||||||||||
Sbjct: 431 ggaagactgccctacgagaacatcaagccggaccctgtcctga 473



 Score = 46.1 bits (23), Expect = 0.070
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 42  aatttgactgcctgctgtttgacatggatgacaccatctaccccctgagct 92
           |||| |||||||||||||||||| | ||||||||  | ||||| |||||||
Sbjct: 198 aattcgactgcctgctgtttgacctcgatgacactctgtacccactgagct 248
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>dbj|AK067356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013103J23, full
           insert sequence
          Length = 1315

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 42  aatttgactgcctgctgtttgacatggatgacac 75
           |||| |||||||||||||||||| | ||||||||
Sbjct: 200 aattcgactgcctgctgtttgacctcgatgacac 233
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>dbj|AK142683.1| Mus musculus 10 days lactation, adult female mammary gland cDNA,
           RIKEN full-length enriched library, clone:D730048M03
           product:casein delta, full insert sequence
          Length = 920

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 116 aagaacatccaagactacatg 136
           |||||||||||||||||||||
Sbjct: 510 aagaacatccaagactacatg 530
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>dbj|AK164795.1| Mus musculus 10 days lactation, adult female mammary gland cDNA,
           RIKEN full-length enriched library, clone:D730045O16
           product:casein delta, full insert sequence
          Length = 758

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 116 aagaacatccaagactacatg 136
           |||||||||||||||||||||
Sbjct: 348 aagaacatccaagactacatg 368
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>dbj|AK164768.1| Mus musculus 10 days lactation, adult female mammary gland cDNA,
           RIKEN full-length enriched library, clone:D730018I02
           product:casein delta, full insert sequence
          Length = 761

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 116 aagaacatccaagactacatg 136
           |||||||||||||||||||||
Sbjct: 350 aagaacatccaagactacatg 370
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>dbj|AK164767.1| Mus musculus 10 days lactation, adult female mammary gland cDNA,
           RIKEN full-length enriched library, clone:D730018F19
           product:casein delta, full insert sequence
          Length = 762

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 116 aagaacatccaagactacatg 136
           |||||||||||||||||||||
Sbjct: 352 aagaacatccaagactacatg 372
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>dbj|AK164763.1| Mus musculus 10 days lactation, adult female mammary gland cDNA,
           RIKEN full-length enriched library, clone:D730017I01
           product:casein delta, full insert sequence
          Length = 745

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 116 aagaacatccaagactacatg 136
           |||||||||||||||||||||
Sbjct: 335 aagaacatccaagactacatg 355
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>dbj|AK052780.1| Mus musculus 10 days lactation, adult female mammary gland cDNA,
           RIKEN full-length enriched library, clone:D730001A11
           product:casein delta, full insert sequence
          Length = 759

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 116 aagaacatccaagactacatg 136
           |||||||||||||||||||||
Sbjct: 350 aagaacatccaagactacatg 370
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>dbj|AK021337.1| Mus musculus 10 days lactation, adult female mammary gland cDNA,
           RIKEN full-length enriched library, clone:D730043N14
           product:casein delta, full insert sequence
          Length = 756

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 116 aagaacatccaagactacatg 136
           |||||||||||||||||||||
Sbjct: 348 aagaacatccaagactacatg 368
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>dbj|AK085747.1| Mus musculus 10 days lactation, adult female mammary gland cDNA,
           RIKEN full-length enriched library, clone:D730040A14
           product:casein delta, full insert sequence
          Length = 760

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 116 aagaacatccaagactacatg 136
           |||||||||||||||||||||
Sbjct: 350 aagaacatccaagactacatg 370
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>dbj|AK085744.1| Mus musculus 10 days lactation, adult female mammary gland cDNA,
           RIKEN full-length enriched library, clone:D730034M22
           product:casein delta, full insert sequence
          Length = 766

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 116 aagaacatccaagactacatg 136
           |||||||||||||||||||||
Sbjct: 352 aagaacatccaagactacatg 372
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>gb|AC074046.9|AC074046 Mus musculus 5 BAC RP23-440C1 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 182534

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 116   aagaacatccaagactacatg 136
             |||||||||||||||||||||
Sbjct: 24975 aagaacatccaagactacatg 24955
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>gb|BC002084.1| Mus musculus casein delta, mRNA (cDNA clone MGC:6256
           IMAGE:3489886), complete cds
          Length = 760

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 116 aagaacatccaagactacatg 136
           |||||||||||||||||||||
Sbjct: 333 aagaacatccaagactacatg 353
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>ref|NM_009973.1| Mus musculus casein delta (Csnd), mRNA
          Length = 728

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 116 aagaacatccaagactacatg 136
           |||||||||||||||||||||
Sbjct: 318 aagaacatccaagactacatg 338
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>emb|V00740.1|MMECAS Mouse messenger RNA for epsilon-casein
          Length = 728

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 116 aagaacatccaagactacatg 136
           |||||||||||||||||||||
Sbjct: 318 aagaacatccaagactacatg 338
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>gb|J00379.1|MUSECA mouse epsilon casein mrna
          Length = 729

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 116 aagaacatccaagactacatg 136
           |||||||||||||||||||||
Sbjct: 318 aagaacatccaagactacatg 338
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>gb|AC009253.17| Drosophila melanogaster clone BACR24F17, complete sequence
          Length = 160280

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 281    ctgccgtacgagaagctgaa 300
              ||||||||||||||||||||
Sbjct: 155169 ctgccgtacgagaagctgaa 155188
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>ref|NM_116069.3| Arabidopsis thaliana catalytic/ hydrolase AT3G62040 mRNA, complete
           cds
          Length = 867

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 95  ggaatcaacttagcatgccgcaagaacatccaagactacatgct 138
           |||||||||||||| || || || ||||||||||| | ||||||
Sbjct: 138 ggaatcaacttagcttgtcgaaacaacatccaagagttcatgct 181
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>gb|BC083769.1| Rattus norvegicus cDNA clone IMAGE:7193220
          Length = 1680

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 156 aggagagcctggtccccaag 175
           ||||||||||||||||||||
Sbjct: 750 aggagagcctggtccccaag 769
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>gb|BC105845.1| Rattus norvegicus cDNA clone MGC:125023 IMAGE:7456327, complete cds
          Length = 1445

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 156 aggagagcctggtccccaag 175
           ||||||||||||||||||||
Sbjct: 522 aggagagcctggtccccaag 541
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>ref|XM_590020.2| PREDICTED: Bos taurus similar to DnaJ (Hsp40) homolog, subfamily C,
            member 10, transcript variant 2 (LOC539876), mRNA
          Length = 3606

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 59   tttgacatggatgacaccat 78
            ||||||||||||||||||||
Sbjct: 1958 tttgacatggatgacaccat 1939
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>ref|XM_878796.1| PREDICTED: Bos taurus similar to DnaJ (Hsp40) homolog, subfamily C,
            member 10, transcript variant 3 (LOC539876), mRNA
          Length = 3474

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 59   tttgacatggatgacaccat 78
            ||||||||||||||||||||
Sbjct: 1826 tttgacatggatgacaccat 1807
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>gb|AY089550.1| Drosophila melanogaster LD26837 full insert cDNA
          Length = 4025

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 281  ctgccgtacgagaagctgaa 300
            ||||||||||||||||||||
Sbjct: 2595 ctgccgtacgagaagctgaa 2576
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>gb|AC158983.2| Mus musculus BAC clone RP23-264L8 from chromosome 14, complete sequence
          Length = 218519

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    tttgacatggatgacaccat 78
             ||||||||||||||||||||
Sbjct: 74461 tttgacatggatgacaccat 74442
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>gb|BT010899.1| Arabidopsis thaliana At3g62040 mRNA, complete cds
          Length = 750

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 95  ggaatcaacttagcatgccgcaagaacatccaagactacatgct 138
           |||||||||||||| || || || ||||||||||| | ||||||
Sbjct: 73  ggaatcaacttagcttgtcgaaacaacatccaagagttcatgct 116
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>gb|AC124401.3| Mus musculus BAC clone RP24-362C2 from chromosome 19, complete sequence
          Length = 138622

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   ggagagcctggtccccaaga 176
             ||||||||||||||||||||
Sbjct: 88618 ggagagcctggtccccaaga 88599
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>emb|AJ252018.1|DME252018 Drosophila melanogaster mRNA for mitochondrial aconitase (mAc gene)
          Length = 2889

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 ctgccgtacgagaagctgaa 300
           ||||||||||||||||||||
Sbjct: 304 ctgccgtacgagaagctgaa 323
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 253     tgaattccacgccagcgtgc 272
               ||||||||||||||||||||
Sbjct: 1060143 tgaattccacgccagcgtgc 1060124
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>ref|NM_079969.2| Drosophila melanogaster Aconitase CG9244-RB (Acon), mRNA
          Length = 3156

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 ctgccgtacgagaagctgaa 300
           ||||||||||||||||||||
Sbjct: 564 ctgccgtacgagaagctgaa 583
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>gb|AY051705.1| Drosophila melanogaster LD24561 full length cDNA
          Length = 2751

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 ctgccgtacgagaagctgaa 300
           ||||||||||||||||||||
Sbjct: 270 ctgccgtacgagaagctgaa 289
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>gb|AC093099.1| Drosophila melanogaster, chromosome 2L, region 39A-39D, BAC clone
            BACR34H23, complete sequence
          Length = 163475

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 281  ctgccgtacgagaagctgaa 300
            ||||||||||||||||||||
Sbjct: 9627 ctgccgtacgagaagctgaa 9646
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>gb|AC026475.6|AC026475 Homo sapiens chromosome 16 clone RP11-71H23, complete sequence
          Length = 159611

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 58     gtttgacatggatgacaccatcta 81
              |||| |||||||||||||||||||
Sbjct: 114999 gttttacatggatgacaccatcta 115022
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>emb|BX822714.1|CNS0A7T1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB5ZB10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 885

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 95  ggaatcaacttagcatgccgcaagaacatccaagactacatgct 138
           |||||||||||||| || || || ||||||||||| | ||||||
Sbjct: 155 ggaatcaacttagcttgtcgaaacaacatccaagagttcatgct 198
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>gb|AE003669.5| Drosophila melanogaster chromosome 2L, section 78 of 83 of the complete
              sequence
          Length = 273993

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 281    ctgccgtacgagaagctgaa 300
              ||||||||||||||||||||
Sbjct: 159965 ctgccgtacgagaagctgaa 159984
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>gb|AC006574.1|AC006574 Drosophila melanogaster, chromosome 2R, region 39A3-39B1, P1 clones
             DS02919 and DS05130, complete sequence
          Length = 127035

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 281   ctgccgtacgagaagctgaa 300
             ||||||||||||||||||||
Sbjct: 87472 ctgccgtacgagaagctgaa 87491
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>gb|AC151478.1| Mus musculus BAC clone RP23-83K12 from 19, complete sequence
          Length = 219132

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   ggagagcctggtccccaaga 176
             ||||||||||||||||||||
Sbjct: 75428 ggagagcctggtccccaaga 75409
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>emb|AL831738.4| Mouse DNA sequence from clone RP23-451K12 on chromosome 4, complete
              sequence
          Length = 188894

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 73     caccatctaccccctgagcttggg 96
              |||||||||| |||||||||||||
Sbjct: 152082 caccatctacaccctgagcttggg 152059


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,236,425
Number of Sequences: 3902068
Number of extensions: 2236425
Number of successful extensions: 56572
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56441
Number of HSP's gapped (non-prelim): 131
length of query: 328
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 306
effective length of database: 17,147,199,772
effective search space: 5247043130232
effective search space used: 5247043130232
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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