ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart08a09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY921641.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR4) mRNA, complete cds Length = 1833 Score = 240 bits (121), Expect = 2e-60 Identities = 178/197 (90%) Strand = Plus / Plus Query: 39 gggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagccgcacg 98 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 722 gggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtcccgcagccgcacg 781 Query: 99 ccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgaggccacgg 158 |||||| ||||||| ||||||||||||| ||||| | |||||||| |||||||||| Sbjct: 782 gcgccgtctactacgcgcagcgcgccacccggggcggcctcctcatcactgaggccacgg 841 Query: 159 gcgtctccgacacggcgcaggggtacacggacacccccggcgtgtggacggccgagcagg 218 |||||||||||||||||||||| ||||| ||||| || || ||||||||| |||| |||| Sbjct: 842 gcgtctccgacacggcgcagggctacaccgacacgccgggagtgtggacgcccgaccagg 901 Query: 219 tggaggcgtggcggccc 235 ||| ||||||||||||| Sbjct: 902 tggcggcgtggcggccc 918
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 155 bits (78), Expect = 8e-35 Identities = 174/206 (84%) Strand = Plus / Minus Query: 24 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 83 |||| ||| ||||||| |||||||| |||||||| |||||| | |||||||||||||||| Sbjct: 5907009 tcgagctctcccaccgtgtggtgctcgcgccgctcacgcggaaccgctcctacggcaacg 5906950 Query: 84 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 143 |||||| ||||||||| | |||||||| ||||||||||||| |||||| | ||| Sbjct: 5906949 tgccgcggccgcacgcggtgctgtactacacgcagcgcgccaccagcggcggcctcctcg 5906890 Query: 144 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 203 |||| |||||||| |||||||||||||| |||||||| ||| |||||||||||||| | | Sbjct: 5906889 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggacacccccggcatct 5906830 Query: 204 ggacggccgagcaggtggaggcgtgg 229 ||||| ||||||| ||||||||| Sbjct: 5906829 ggacgcagcagcaggtcgaggcgtgg 5906804 Score = 149 bits (75), Expect = 5e-33 Identities = 144/167 (86%) Strand = Plus / Minus Query: 33 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagc 92 |||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||| Sbjct: 5925032 cccaccgggtggtgctcgcgccgctgacgcggtgccgctcctacggccacgtgccgcagc 5924973 Query: 93 cgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 152 |||||||||| ||||||||| ||||||||||||| |||||| | |||||| | |||| Sbjct: 5924972 cgcacgccgcggtgtactactcgcagcgcgccaccaacggcggactcctcatcgcggagg 5924913 Query: 153 ccacgggcgtctccgacacggcgcaggggtacacggacacccccggc 199 |||| | | ||||| ||| |||||||| ||| |||||||||||||| Sbjct: 5924912 ccactgtcatctcccccaccgcgcagggctacccggacacccccggc 5924866 Score = 139 bits (70), Expect = 4e-30 Identities = 172/206 (83%) Strand = Plus / Minus Query: 24 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 83 |||| ||| ||||||| ||| |||| ||||| |||||||| || ||||||||||||| Sbjct: 5896806 tcgatctctcccaccgtgtgctgctctcgccgatgacgcggtgccgatcctacggcaacg 5896747 Query: 84 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 143 |||||||||||||||| || |||||||| ||||||||||||| |||||| | |||| Sbjct: 5896746 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 5896687 Query: 144 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 203 |||| |||||||| |||||||||||||| |||||||| ||| |||| || |||||||| | Sbjct: 5896686 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggagacacccggcgtct 5896627 Query: 204 ggacggccgagcaggtggaggcgtgg 229 ||||| ||||| || ||||||||| Sbjct: 5896626 ggacgcgggagcacgtcgaggcgtgg 5896601 Score = 135 bits (68), Expect = 7e-29 Identities = 149/176 (84%) Strand = Plus / Minus Query: 26 gacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtg 85 |||||| ||||||| ||| |||| |||||| |||||||| || ||||||||||||||| Sbjct: 5891134 gacctctcccaccgtgtgctgctcgcgccgatgacgcggtgccgatcctacggcaacgtg 5891075 Query: 86 ccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatc 145 |||||||||||||| || |||||||| ||||||||||||| |||||| | |||||| Sbjct: 5891074 ccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgcggcggcctcctcatc 5891015 Query: 146 accgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgt 201 || |||||||| |||||||||| ||| |||||||| ||| |||| || |||||||| Sbjct: 5891014 acggaggccaccggcgtctccgccaccgcgcagggctacccggagacacccggcgt 5890959 Score = 101 bits (51), Expect = 1e-18 Identities = 138/167 (82%) Strand = Plus / Minus Query: 33 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagc 92 ||||||| |||||||| |||||||| |||||| ||||||||||||||||||||||||| Sbjct: 5930316 cccaccgtgtggtgctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagc 5930257 Query: 93 cgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 152 ||||||| || ||||||||| |||||| || ||| ||||| | |||||| | |||| Sbjct: 5930256 cgcacgcggcggtgtactactcgcagcgggcgaccaggggcggcctcctcatcgcggagg 5930197 Query: 153 ccacgggcgtctccgacacggcgcaggggtacacggacacccccggc 199 |||| | | ||||| ||| |||||||| ||| |||| ||||||||| Sbjct: 5930196 ccaccgacatctcccccaccgcgcagggctacccggagacccccggc 5930150 Score = 81.8 bits (41), Expect = 9e-13 Identities = 149/185 (80%) Strand = Plus / Minus Query: 24 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 83 |||| ||| ||||||| |||||||| ||||||||||| ||| |||||||||| | ||| Sbjct: 5916622 tcgagctctcccaccgcgtggtgctcgcgccgctgactcggtgccgctcctacgaccacg 5916563 Query: 84 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 143 |||| ||||||||||| || |||||||| ||||||||||||| ||||| | |||| Sbjct: 5916562 tgccacagccgcacgcggcgctgtactactcgcagcgcgccaccaatggcggcctcctca 5916503 Query: 144 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 203 || | |||||||| || || |||| ||| | | |||| ||| |||| | ||||||||| | Sbjct: 5916502 tctcggaggccaccggggtgtccgccaccggggagggctacccggagatccccggcgtct 5916443 Query: 204 ggacg 208 ||||| Sbjct: 5916442 ggacg 5916438
>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0024N18 Length = 128739 Score = 155 bits (78), Expect = 8e-35 Identities = 174/206 (84%) Strand = Plus / Minus Query: 24 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 83 |||| ||| ||||||| |||||||| |||||||| |||||| | |||||||||||||||| Sbjct: 28661 tcgagctctcccaccgtgtggtgctcgcgccgctcacgcggaaccgctcctacggcaacg 28602 Query: 84 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 143 |||||| ||||||||| | |||||||| ||||||||||||| |||||| | ||| Sbjct: 28601 tgccgcggccgcacgcggtgctgtactacacgcagcgcgccaccagcggcggcctcctcg 28542 Query: 144 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 203 |||| |||||||| |||||||||||||| |||||||| ||| |||||||||||||| | | Sbjct: 28541 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggacacccccggcatct 28482 Query: 204 ggacggccgagcaggtggaggcgtgg 229 ||||| ||||||| ||||||||| Sbjct: 28481 ggacgcagcagcaggtcgaggcgtgg 28456 Score = 149 bits (75), Expect = 5e-33 Identities = 144/167 (86%) Strand = Plus / Minus Query: 33 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagc 92 |||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||| Sbjct: 46684 cccaccgggtggtgctcgcgccgctgacgcggtgccgctcctacggccacgtgccgcagc 46625 Query: 93 cgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 152 |||||||||| ||||||||| ||||||||||||| |||||| | |||||| | |||| Sbjct: 46624 cgcacgccgcggtgtactactcgcagcgcgccaccaacggcggactcctcatcgcggagg 46565 Query: 153 ccacgggcgtctccgacacggcgcaggggtacacggacacccccggc 199 |||| | | ||||| ||| |||||||| ||| |||||||||||||| Sbjct: 46564 ccactgtcatctcccccaccgcgcagggctacccggacacccccggc 46518 Score = 139 bits (70), Expect = 4e-30 Identities = 172/206 (83%) Strand = Plus / Minus Query: 24 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 83 |||| ||| ||||||| ||| |||| ||||| |||||||| || ||||||||||||| Sbjct: 18458 tcgatctctcccaccgtgtgctgctctcgccgatgacgcggtgccgatcctacggcaacg 18399 Query: 84 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 143 |||||||||||||||| || |||||||| ||||||||||||| |||||| | |||| Sbjct: 18398 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 18339 Query: 144 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 203 |||| |||||||| |||||||||||||| |||||||| ||| |||| || |||||||| | Sbjct: 18338 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggagacacccggcgtct 18279 Query: 204 ggacggccgagcaggtggaggcgtgg 229 ||||| ||||| || ||||||||| Sbjct: 18278 ggacgcgggagcacgtcgaggcgtgg 18253 Score = 135 bits (68), Expect = 7e-29 Identities = 149/176 (84%) Strand = Plus / Minus Query: 26 gacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtg 85 |||||| ||||||| ||| |||| |||||| |||||||| || ||||||||||||||| Sbjct: 12786 gacctctcccaccgtgtgctgctcgcgccgatgacgcggtgccgatcctacggcaacgtg 12727 Query: 86 ccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatc 145 |||||||||||||| || |||||||| ||||||||||||| |||||| | |||||| Sbjct: 12726 ccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgcggcggcctcctcatc 12667 Query: 146 accgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgt 201 || |||||||| |||||||||| ||| |||||||| ||| |||| || |||||||| Sbjct: 12666 acggaggccaccggcgtctccgccaccgcgcagggctacccggagacacccggcgt 12611 Score = 101 bits (51), Expect = 1e-18 Identities = 138/167 (82%) Strand = Plus / Minus Query: 33 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagc 92 ||||||| |||||||| |||||||| |||||| ||||||||||||||||||||||||| Sbjct: 51968 cccaccgtgtggtgctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagc 51909 Query: 93 cgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 152 ||||||| || ||||||||| |||||| || ||| ||||| | |||||| | |||| Sbjct: 51908 cgcacgcggcggtgtactactcgcagcgggcgaccaggggcggcctcctcatcgcggagg 51849 Query: 153 ccacgggcgtctccgacacggcgcaggggtacacggacacccccggc 199 |||| | | ||||| ||| |||||||| ||| |||| ||||||||| Sbjct: 51848 ccaccgacatctcccccaccgcgcagggctacccggagacccccggc 51802 Score = 81.8 bits (41), Expect = 9e-13 Identities = 149/185 (80%) Strand = Plus / Minus Query: 24 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 83 |||| ||| ||||||| |||||||| ||||||||||| ||| |||||||||| | ||| Sbjct: 38274 tcgagctctcccaccgcgtggtgctcgcgccgctgactcggtgccgctcctacgaccacg 38215 Query: 84 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 143 |||| ||||||||||| || |||||||| ||||||||||||| ||||| | |||| Sbjct: 38214 tgccacagccgcacgcggcgctgtactactcgcagcgcgccaccaatggcggcctcctca 38155 Query: 144 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 203 || | |||||||| || || |||| ||| | | |||| ||| |||| | ||||||||| | Sbjct: 38154 tctcggaggccaccggggtgtccgccaccggggagggctacccggagatccccggcgtct 38095 Query: 204 ggacg 208 ||||| Sbjct: 38094 ggacg 38090
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 155 bits (78), Expect = 8e-35 Identities = 174/206 (84%) Strand = Plus / Minus Query: 24 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 83 |||| ||| ||||||| |||||||| |||||||| |||||| | |||||||||||||||| Sbjct: 107784 tcgagctctcccaccgtgtggtgctcgcgccgctcacgcggaaccgctcctacggcaacg 107725 Query: 84 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 143 |||||| ||||||||| | |||||||| ||||||||||||| |||||| | ||| Sbjct: 107724 tgccgcggccgcacgcggtgctgtactacacgcagcgcgccaccagcggcggcctcctcg 107665 Query: 144 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 203 |||| |||||||| |||||||||||||| |||||||| ||| |||||||||||||| | | Sbjct: 107664 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggacacccccggcatct 107605 Query: 204 ggacggccgagcaggtggaggcgtgg 229 ||||| ||||||| ||||||||| Sbjct: 107604 ggacgcagcagcaggtcgaggcgtgg 107579 Score = 149 bits (75), Expect = 5e-33 Identities = 144/167 (86%) Strand = Plus / Minus Query: 33 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagc 92 |||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||| Sbjct: 125807 cccaccgggtggtgctcgcgccgctgacgcggtgccgctcctacggccacgtgccgcagc 125748 Query: 93 cgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 152 |||||||||| ||||||||| ||||||||||||| |||||| | |||||| | |||| Sbjct: 125747 cgcacgccgcggtgtactactcgcagcgcgccaccaacggcggactcctcatcgcggagg 125688 Query: 153 ccacgggcgtctccgacacggcgcaggggtacacggacacccccggc 199 |||| | | ||||| ||| |||||||| ||| |||||||||||||| Sbjct: 125687 ccactgtcatctcccccaccgcgcagggctacccggacacccccggc 125641 Score = 139 bits (70), Expect = 4e-30 Identities = 172/206 (83%) Strand = Plus / Minus Query: 24 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 83 |||| ||| ||||||| ||| |||| ||||| |||||||| || ||||||||||||| Sbjct: 97581 tcgatctctcccaccgtgtgctgctctcgccgatgacgcggtgccgatcctacggcaacg 97522 Query: 84 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 143 |||||||||||||||| || |||||||| ||||||||||||| |||||| | |||| Sbjct: 97521 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 97462 Query: 144 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 203 |||| |||||||| |||||||||||||| |||||||| ||| |||| || |||||||| | Sbjct: 97461 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggagacacccggcgtct 97402 Query: 204 ggacggccgagcaggtggaggcgtgg 229 ||||| ||||| || ||||||||| Sbjct: 97401 ggacgcgggagcacgtcgaggcgtgg 97376 Score = 135 bits (68), Expect = 7e-29 Identities = 149/176 (84%) Strand = Plus / Minus Query: 26 gacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtg 85 |||||| ||||||| ||| |||| |||||| |||||||| || ||||||||||||||| Sbjct: 91909 gacctctcccaccgtgtgctgctcgcgccgatgacgcggtgccgatcctacggcaacgtg 91850 Query: 86 ccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatc 145 |||||||||||||| || |||||||| ||||||||||||| |||||| | |||||| Sbjct: 91849 ccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgcggcggcctcctcatc 91790 Query: 146 accgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgt 201 || |||||||| |||||||||| ||| |||||||| ||| |||| || |||||||| Sbjct: 91789 acggaggccaccggcgtctccgccaccgcgcagggctacccggagacacccggcgt 91734 Score = 101 bits (51), Expect = 1e-18 Identities = 138/167 (82%) Strand = Plus / Minus Query: 33 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagc 92 ||||||| |||||||| |||||||| |||||| ||||||||||||||||||||||||| Sbjct: 131091 cccaccgtgtggtgctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagc 131032 Query: 93 cgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 152 ||||||| || ||||||||| |||||| || ||| ||||| | |||||| | |||| Sbjct: 131031 cgcacgcggcggtgtactactcgcagcgggcgaccaggggcggcctcctcatcgcggagg 130972 Query: 153 ccacgggcgtctccgacacggcgcaggggtacacggacacccccggc 199 |||| | | ||||| ||| |||||||| ||| |||| ||||||||| Sbjct: 130971 ccaccgacatctcccccaccgcgcagggctacccggagacccccggc 130925 Score = 81.8 bits (41), Expect = 9e-13 Identities = 149/185 (80%) Strand = Plus / Minus Query: 24 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 83 |||| ||| ||||||| |||||||| ||||||||||| ||| |||||||||| | ||| Sbjct: 117397 tcgagctctcccaccgcgtggtgctcgcgccgctgactcggtgccgctcctacgaccacg 117338 Query: 84 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 143 |||| ||||||||||| || |||||||| ||||||||||||| ||||| | |||| Sbjct: 117337 tgccacagccgcacgcggcgctgtactactcgcagcgcgccaccaatggcggcctcctca 117278 Query: 144 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 203 || | |||||||| || || |||| ||| | | |||| ||| |||| | ||||||||| | Sbjct: 117277 tctcggaggccaccggggtgtccgccaccggggagggctacccggagatccccggcgtct 117218 Query: 204 ggacg 208 ||||| Sbjct: 117217 ggacg 117213
>dbj|AK105590.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-129-A06, full insert sequence Length = 1311 Score = 155 bits (78), Expect = 8e-35 Identities = 174/206 (84%) Strand = Plus / Plus Query: 24 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 83 |||| ||| ||||||| |||||||| |||||||| |||||| | |||||||||||||||| Sbjct: 156 tcgagctctcccaccgtgtggtgctcgcgccgctcacgcggaaccgctcctacggcaacg 215 Query: 84 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 143 |||||| ||||||||| | |||||||| ||||||||||||| |||||| | ||| Sbjct: 216 tgccgcggccgcacgcggtgctgtactacacgcagcgcgccaccagcggcggcctcctcg 275 Query: 144 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 203 |||| |||||||| |||||||||||||| |||||||| ||| |||||||||||||| | | Sbjct: 276 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggacacccccggcatct 335 Query: 204 ggacggccgagcaggtggaggcgtgg 229 ||||| ||||||| ||||||||| Sbjct: 336 ggacgcagcagcaggtcgaggcgtgg 361
>dbj|AK104256.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E01, full insert sequence Length = 1281 Score = 155 bits (78), Expect = 8e-35 Identities = 174/206 (84%) Strand = Plus / Plus Query: 24 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 83 |||| ||| |||||||||||||||| ||||| |||||||| || ||||||||||||| Sbjct: 153 tcgatctctcccaccgggtggtgctctcgccgatgacgcggtgccgatcctacggcaacg 212 Query: 84 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 143 |||||||||||||||| || |||||||| ||||||||||||| |||||| | |||| Sbjct: 213 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 272 Query: 144 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 203 |||| |||||||| |||||||||||||| |||||||| ||| |||| || |||||||| | Sbjct: 273 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggagacacccggcgtct 332 Query: 204 ggacggccgagcaggtggaggcgtgg 229 ||||| ||||| || ||||||||| Sbjct: 333 ggacgcgggagcacgtcgaggcgtgg 358
>dbj|AK104193.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D11, full insert sequence Length = 1281 Score = 155 bits (78), Expect = 8e-35 Identities = 174/206 (84%) Strand = Plus / Plus Query: 24 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 83 |||| ||| |||||||||||||||| ||||| |||||||| || ||||||||||||| Sbjct: 153 tcgatctctcccaccgggtggtgctctcgccgatgacgcggtgccgatcctacggcaacg 212 Query: 84 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 143 |||||||||||||||| || |||||||| ||||||||||||| |||||| | |||| Sbjct: 213 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 272 Query: 144 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 203 |||| |||||||| |||||||||||||| |||||||| ||| |||| || |||||||| | Sbjct: 273 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggagacacccggcgtct 332 Query: 204 ggacggccgagcaggtggaggcgtgg 229 ||||| ||||| || ||||||||| Sbjct: 333 ggacgcgggagcacgtcgaggcgtgg 358
>dbj|AK104039.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-G06, full insert sequence Length = 1422 Score = 155 bits (78), Expect = 8e-35 Identities = 174/206 (84%) Strand = Plus / Plus Query: 24 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 83 |||| ||| |||||||||||||||| ||||| |||||||| || ||||||||||||| Sbjct: 148 tcgatctctcccaccgggtggtgctctcgccgatgacgcggtgccgatcctacggcaacg 207 Query: 84 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 143 |||||||||||||||| || |||||||| ||||||||||||| |||||| | |||| Sbjct: 208 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 267 Query: 144 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 203 |||| |||||||| |||||||||||||| |||||||| ||| |||| || |||||||| | Sbjct: 268 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggagacacccggcgtct 327 Query: 204 ggacggccgagcaggtggaggcgtgg 229 ||||| ||||| || ||||||||| Sbjct: 328 ggacgcgggagcacgtcgaggcgtgg 353
>gb|AY921638.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR1) mRNA, complete cds Length = 1465 Score = 141 bits (71), Expect = 1e-30 Identities = 164/195 (84%) Strand = Plus / Plus Query: 35 caccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagccg 94 ||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 173 caccgggtggtgctggcgccgctgacgaggtgccgctcctacggcaacgtgccgcagcca 232 Query: 95 cacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgaggcc 154 |||||||||||||||||| |||||||||||| || || |||||||| | |||||| Sbjct: 233 cacgccgccgtgtactactcccagcgcgccaccaggggtggcctgctcatcgcggaggcc 292 Query: 155 acgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgtggacggccgag 214 ||||| || || | ||| |||||||||||| |||| || || ||| | |||||| ||| Sbjct: 293 acgggggtgtcggccaccgcgcaggggtacccggagactcctggcatctggacgcaggag 352 Query: 215 caggtggaggcgtgg 229 ||||| ||||||||| Sbjct: 353 caggtcgaggcgtgg 367
>gb|AY108052.1| Zea mays PCO079165 mRNA sequence Length = 1489 Score = 141 bits (71), Expect = 1e-30 Identities = 164/195 (84%) Strand = Plus / Plus Query: 35 caccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagccg 94 ||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 195 caccgggtggtgctggcgccgctgacgaggtgccgctcctacggcaacgtgccgcagcca 254 Query: 95 cacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgaggcc 154 |||||||||||||||||| |||||||||||| || || |||||||| | |||||| Sbjct: 255 cacgccgccgtgtactactcccagcgcgccaccaggggtggcctgctcatcgcggaggcc 314 Query: 155 acgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgtggacggccgag 214 ||||| || || | ||| |||||||||||| |||| || || ||| | |||||| ||| Sbjct: 315 acgggggtgtcggccaccgcgcaggggtacccggagactcctggcatctggacgcaggag 374 Query: 215 caggtggaggcgtgg 229 ||||| ||||||||| Sbjct: 375 caggtcgaggcgtgg 389
>dbj|AK061212.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-D07, full insert sequence Length = 1434 Score = 139 bits (70), Expect = 4e-30 Identities = 172/206 (83%) Strand = Plus / Plus Query: 24 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 83 |||| ||| ||||||| ||| |||| ||||| |||||||| || ||||||||||||| Sbjct: 153 tcgatctctcccaccgtgtgctgctctcgccgatgacgcggtgccgatcctacggcaacg 212 Query: 84 tgccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctca 143 |||||||||||||||| || |||||||| ||||||||||||| |||||| | |||| Sbjct: 213 tgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagcggcggcctcctca 272 Query: 144 tcaccgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgt 203 |||| |||||||| |||||||||||||| |||||||| ||| |||| || |||||||| | Sbjct: 273 tcacggaggccaccggcgtctccgacaccgcgcagggctacccggagacacccggcgtct 332 Query: 204 ggacggccgagcaggtggaggcgtgg 229 ||||| ||||| || ||||||||| Sbjct: 333 ggacgcgggagcacgtcgaggcgtgg 358
>gb|AY921639.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR2) mRNA, complete cds Length = 1409 Score = 135 bits (68), Expect = 7e-29 Identities = 128/148 (86%) Strand = Plus / Plus Query: 35 caccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagccg 94 ||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 158 caccgggtggtgctggcgccgctgacgaggtgccgctcctacggcaacgtgccgcagcca 217 Query: 95 cacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgaggcc 154 |||||||||||||||||| ||||||||||||| || || |||||||| | |||||| Sbjct: 218 cacgccgccgtgtactactcgcagcgcgccaccaggggtggcctgctcatcgcggaggcc 277 Query: 155 acgggcgtctccgacacggcgcaggggt 182 ||||| || || | ||| |||||||||| Sbjct: 278 acgggggtgtcggccaccgcgcaggggt 305
>dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-E09, full insert sequence Length = 1517 Score = 135 bits (68), Expect = 7e-29 Identities = 149/176 (84%) Strand = Plus / Plus Query: 26 gacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtg 85 |||||| ||||||| ||| |||| |||||| |||||||| || ||||||||||||||| Sbjct: 233 gacctctcccaccgtgtgctgctcgcgccgatgacgcggtgccgatcctacggcaacgtg 292 Query: 86 ccgcagccgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatc 145 |||||||||||||| || |||||||| ||||||||||||| |||||| | |||||| Sbjct: 293 ccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgcggcggcctcctcatc 352 Query: 146 accgaggccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgt 201 || |||||||| |||||||||| ||| |||||||| ||| |||| || |||||||| Sbjct: 353 acggaggccaccggcgtctccgccaccgcgcagggctacccggagacacccggcgt 408
>gb|AY921640.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR3) mRNA, complete cds Length = 1431 Score = 113 bits (57), Expect = 3e-22 Identities = 162/197 (82%) Strand = Plus / Plus Query: 33 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagc 92 ||||||| ||||||||||||||| |||||||| ||| || ||| |||||||||||| Sbjct: 138 cccaccgcgtggtgctggcgccgatgacgcggtgccgcgccatcggggacgtgccgcagc 197 Query: 93 cgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 152 |||||||||||||||||||| ||||||||||| | ||||| ||||||||||||||| Sbjct: 198 cgcacgccgccgtgtactactcgcagcgcgccagcaggggcggcgtgctcatcaccgagg 257 Query: 153 ccacgggcgtctccgacacggcgcaggggtacacggacacccccggcgtgtggacggccg 212 |||||| || |||| ||| |||||||| | | ||| |||||||| | |||||| | Sbjct: 258 gcacgggggtgtccgccaccgcgcagggcttcccggggtcccccggcatctggacgcagg 317 Query: 213 agcaggtggaggcgtgg 229 ||||||||| ||||||| Sbjct: 318 agcaggtggcggcgtgg 334
>emb|AJ557138.1|OSA557138 Oryza sativa (japonica cultivar-group) mRNA for oxo-phytodienoic acid reductase (opda gene) Length = 1343 Score = 101 bits (51), Expect = 1e-18 Identities = 138/167 (82%) Strand = Plus / Plus Query: 33 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagc 92 ||||||| |||||||| |||||||| |||||| ||||||||||||||||||||||||| Sbjct: 122 cccaccgtgtggtgctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagc 181 Query: 93 cgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 152 ||||||| || ||||||||| |||||| || ||| ||||| | |||||| | |||| Sbjct: 182 cgcacgcggcggtgtactactcgcagcgggcgaccaggggcggcctcctcatcgcggagg 241 Query: 153 ccacgggcgtctccgacacggcgcaggggtacacggacacccccggc 199 |||| | | ||||| ||| |||||||| ||| |||| ||||||||| Sbjct: 242 ccaccgacatctcccccaccgcgcagggctacccggagacccccggc 288
>dbj|AB122088.1| Oryza sativa (japonica cultivar-group) OPDAR1 gene for 12-oxo-phytodienoic acid reductase, complete cds Length = 2492 Score = 101 bits (51), Expect = 1e-18 Identities = 138/167 (82%) Strand = Plus / Plus Query: 33 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagc 92 ||||||| |||||||| |||||||| |||||| ||||||||||||||||||||||||| Sbjct: 1136 cccaccgtgtggtgctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagc 1195 Query: 93 cgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 152 ||||||| || ||||||||| |||||| || ||| ||||| | |||||| | |||| Sbjct: 1196 cgcacgcggcggtgtactactcgcagcgggcgaccaggggcggcctcctcatcgcggagg 1255 Query: 153 ccacgggcgtctccgacacggcgcaggggtacacggacacccccggc 199 |||| | | ||||| ||| |||||||| ||| |||| ||||||||| Sbjct: 1256 ccaccgacatctcccccaccgcgcagggctacccggagacccccggc 1302
>dbj|AK103067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117P12, full insert sequence Length = 1520 Score = 101 bits (51), Expect = 1e-18 Identities = 138/167 (82%) Strand = Plus / Plus Query: 33 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagc 92 ||||||| |||||||| |||||||| |||||| ||||||||||||||||||||||||| Sbjct: 188 cccaccgtgtggtgctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagc 247 Query: 93 cgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 152 ||||||| || ||||||||| |||||| || ||| ||||| | |||||| | |||| Sbjct: 248 cgcacgcggcggtgtactactcgcagcgggcgaccaggggcggcctcctcatcgcggagg 307 Query: 153 ccacgggcgtctccgacacggcgcaggggtacacggacacccccggc 199 |||| | | ||||| ||| |||||||| ||| |||| ||||||||| Sbjct: 308 ccaccgacatctcccccaccgcgcagggctacccggagacccccggc 354
>dbj|AB040743.1| Oryza sativa RRJ4 mRNA for 12-oxophytodienoic acid reductase, complete cds Length = 1384 Score = 101 bits (51), Expect = 1e-18 Identities = 138/167 (82%) Strand = Plus / Plus Query: 33 cccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtgccgcagc 92 ||||||| |||||||| |||||||| |||||| ||||||||||||||||||||||||| Sbjct: 160 cccaccgtgtggtgctcgcgccgctcacgcggtgccgctcctacggcaacgtgccgcagc 219 Query: 93 cgcacgccgccgtgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgagg 152 ||||||| || ||||||||| |||||| || ||| ||||| | |||||| | |||| Sbjct: 220 cgcacgcggcggtgtactactcgcagcgggcgaccaggggcggcctcctcatcgcggagg 279 Query: 153 ccacgggcgtctccgacacggcgcaggggtacacggacacccccggc 199 |||| | | ||||| ||| |||||||| ||| |||| ||||||||| Sbjct: 280 ccaccgacatctcccccaccgcgcagggctacccggagacccccggc 326
>dbj|AK072596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125E21, full insert sequence Length = 1295 Score = 89.7 bits (45), Expect = 4e-15 Identities = 105/125 (84%) Strand = Plus / Plus Query: 105 tgtactacgggcagcgcgccaccgccggcgggatgctcatcaccgaggccacgggcgtct 164 |||||||| ||||||||||||| |||||| | ||| |||| |||||||| ||||||| Sbjct: 220 tgtactacacgcagcgcgccaccagcggcggcctcctcgtcacggaggccaccggcgtct 279 Query: 165 ccgacacggcgcaggggtacacggacacccccggcgtgtggacggccgagcaggtggagg 224 ||||||| |||||||| ||| |||||||||||||| | |||||| ||||||| |||| Sbjct: 280 ccgacaccgcgcagggctacccggacacccccggcatctggacgcagcagcaggtcgagg 339 Query: 225 cgtgg 229 ||||| Sbjct: 340 cgtgg 344 Score = 69.9 bits (35), Expect = 3e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 24 tcgacctcgcccaccgggtggtgctggcgccgctgacgcggcagcgctcctacggcaacg 83 |||| ||| ||||||| |||||||| |||||||| |||||| | |||||||||||||||| Sbjct: 157 tcgagctctcccaccgtgtggtgctcgcgccgctcacgcggaaccgctcctacggcaacg 216 Query: 84 tgc 86 ||| Sbjct: 217 tgc 219
>emb|AJ557139.1|OSA557139 Oryza sativa (japonica cultivar-group) partial mRNA for oxo-phytodienoic acid reductase (opda2 gene) Length = 1248 Score = 79.8 bits (40), Expect = 4e-12 Identities = 109/132 (82%) Strand = Plus / Plus Query: 68 cgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgggcagcgcgccacc 127 |||||||||||||||||||||||||||||||| || ||||||||| |||||| || ||| Sbjct: 1 cgctcctacggcaacgtgccgcagccgcacgcggcggtgtactactcgcagcgggcgacc 60 Query: 128 gccggcgggatgctcatcaccgaggccacgggcgtctccgacacggcgcaggggtacacg 187 ||||| | |||||| | |||||||| | | ||||| ||| |||||||| ||| || Sbjct: 61 aggggcggcctcctcatcgcggaggccaccgacatctcccccaccgcgcagggctacccg 120 Query: 188 gacacccccggc 199 || ||||||||| Sbjct: 121 gagacccccggc 132
>gb|AY921644.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR7) mRNA, complete cds Length = 1594 Score = 58.0 bits (29), Expect = 1e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 28 cctcgcccaccgggtggtgctggcgccgctgac 60 |||||||||||||||||||||||||||| |||| Sbjct: 326 cctcgcccaccgggtggtgctggcgccgatgac 358
>ref|XM_482784.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1531 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 34 ccaccgggtggtgctggcgccgctgacgcgg 64 |||||||||||||||||||||| |||||||| Sbjct: 205 ccaccgggtggtgctggcgccgatgacgcgg 235
>ref|XM_507257.1| PREDICTED Oryza sativa (japonica cultivar-group), P0493A04.35 mRNA Length = 1560 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 34 ccaccgggtggtgctggcgccgctgacgcgg 64 |||||||||||||||||||||| |||||||| Sbjct: 220 ccaccgggtggtgctggcgccgatgacgcgg 250
>dbj|AK104843.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-G07, full insert sequence Length = 1531 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 34 ccaccgggtggtgctggcgccgctgacgcgg 64 |||||||||||||||||||||| |||||||| Sbjct: 205 ccaccgggtggtgctggcgccgatgacgcgg 235
>dbj|AK071203.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083E07, full insert sequence Length = 1560 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 34 ccaccgggtggtgctggcgccgctgacgcgg 64 |||||||||||||||||||||| |||||||| Sbjct: 220 ccaccgggtggtgctggcgccgatgacgcgg 250
>gb|AY921645.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR8) mRNA, complete cds Length = 1529 Score = 50.1 bits (25), Expect = 0.003 Identities = 31/33 (93%) Strand = Plus / Plus Query: 28 cctcgcccaccgggtggtgctggcgccgctgac 60 |||||| ||||||||||||||||||||| |||| Sbjct: 190 cctcgcgcaccgggtggtgctggcgccgatgac 222
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 50.1 bits (25), Expect = 0.003 Identities = 31/33 (93%) Strand = Plus / Plus Query: 203 tggacggccgagcaggtggaggcgtggcggccc 235 ||||||| |||||||| |||||||||||||||| Sbjct: 1969658 tggacggacgagcaggcggaggcgtggcggccc 1969690
>gb|AE011767.1| Xanthomonas axonopodis pv. citri str. 306, section 145 of 469 of the complete genome Length = 11162 Score = 50.1 bits (25), Expect = 0.003 Identities = 31/33 (93%) Strand = Plus / Minus Query: 101 gccgtgtactacgggcagcgcgccaccgccggc 133 |||| ||||||||| |||||||||||||||||| Sbjct: 9266 gccgagtactacggccagcgcgccaccgccggc 9234
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.20 Identities = 25/26 (96%) Strand = Plus / Plus Query: 39 gggtggtgctggcgccgctgacgcgg 64 ||||||||||||||||| |||||||| Sbjct: 22540279 gggtggtgctggcgccgatgacgcgg 22540304
>dbj|AP004707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0690E03 Length = 139924 Score = 44.1 bits (22), Expect = 0.20 Identities = 25/26 (96%) Strand = Plus / Plus Query: 39 gggtggtgctggcgccgctgacgcgg 64 ||||||||||||||||| |||||||| Sbjct: 13780 gggtggtgctggcgccgatgacgcgg 13805
>dbj|AP004586.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0493A04 Length = 149367 Score = 44.1 bits (22), Expect = 0.20 Identities = 25/26 (96%) Strand = Plus / Plus Query: 39 gggtggtgctggcgccgctgacgcgg 64 ||||||||||||||||| |||||||| Sbjct: 135207 gggtggtgctggcgccgatgacgcgg 135232
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 0.78 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 tgctggcgccgctgacgcggc 65 ||||||||||||||||||||| Sbjct: 2318269 tgctggcgccgctgacgcggc 2318249
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 0.78 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 cgggtggtgctggcgccgctg 58 ||||||||||||||||||||| Sbjct: 4698462 cgggtggtgctggcgccgctg 4698442
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 0.78 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 cctcgacctcgcccaccgggtggtg 46 |||| |||||||||||||||||||| Sbjct: 1821992 cctctacctcgcccaccgggtggtg 1821968
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tggtgctggcgccgctgacg 61 |||||||||||||||||||| Sbjct: 2631980 tggtgctggcgccgctgacg 2631961
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gtggtgctggcgccgctgac 60 |||||||||||||||||||| Sbjct: 638073 gtggtgctggcgccgctgac 638054
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 tacgggcagcgcgccaccgccggc 133 ||||| |||||||||||||||||| Sbjct: 1597026 tacggccagcgcgccaccgccggc 1597003
>emb|AJ972678.1| Pythium aphanidermatum kpa1 gene for P-type ATPase Length = 3354 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 cacgccgccgtgtactacgg 114 |||||||||||||||||||| Sbjct: 2277 cacgccgccgtgtactacgg 2258
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 cgccggcgggatgctcatcaccga 150 ||||||||| |||||||||||||| Sbjct: 101228 cgccggcggcatgctcatcaccga 101205
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 cgccggcgggatgctcatcaccga 150 ||||||||| |||||||||||||| Sbjct: 178912 cgccggcggcatgctcatcaccga 178935
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 cgccggcgggatgctcatcaccga 150 ||||||||| |||||||||||||| Sbjct: 737 cgccggcggcatgctcatcaccga 760
>emb|BX901976.22| Zebrafish DNA sequence from clone DKEY-101P20 in linkage group 22, complete sequence Length = 201928 Score = 40.1 bits (20), Expect = 3.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 83 gtgccgcagccgcacgccgccgtgtact 110 ||||||||||||| ||||||||| |||| Sbjct: 24813 gtgccgcagccgcccgccgccgtctact 24786
>gb|AY131229.2| Streptomyces sp. 139 exopolysaccharide gene cluster, complete sequence Length = 31310 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggtggtgctggcgccgctga 59 |||||||||||||||||||| Sbjct: 7606 ggtggtgctggcgccgctga 7625
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 tacgggcagcgcgccaccgccggc 133 ||||| |||||||||||||||||| Sbjct: 1981827 tacggccagcgcgccaccgccggc 1981804
>gb|AE005885.1| Caulobacter crescentus CB15 section 211 of 359 of the complete genome Length = 11024 Score = 40.1 bits (20), Expect = 3.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 36 accgggtggtgctggcgccgctgacgcg 63 ||||||||||| |||||||| ||||||| Sbjct: 8768 accgggtggtgatggcgccgatgacgcg 8741
>gb|AE005721.1| Caulobacter crescentus CB15 section 47 of 359 of the complete genome Length = 12858 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 accgggtggtgctggcgccg 55 |||||||||||||||||||| Sbjct: 3253 accgggtggtgctggcgccg 3272
>gb|AE012121.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 29 of 460 of the complete genome Length = 10770 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ggtgctggcgccgctgacgc 62 |||||||||||||||||||| Sbjct: 9676 ggtgctggcgccgctgacgc 9695
>gb|DP000057.1| Dasypus novemcinctus target 117 genomic scaffold Length = 444202 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ggccgagcaggtggaggcgt 227 |||||||||||||||||||| Sbjct: 70922 ggccgagcaggtggaggcgt 70941
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ggtgctggcgccgctgacgc 62 |||||||||||||||||||| Sbjct: 319833 ggtgctggcgccgctgacgc 319852
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 gtactacgggcagcgcgccaccgc 129 |||||||| ||||||||||||||| Sbjct: 1270681 gtactacgcgcagcgcgccaccgc 1270704
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 tacgggcagcgcgccaccgccggc 133 ||||| |||||||||||||||||| Sbjct: 2003860 tacggccagcgcgccaccgccggc 2003837
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 cggccgagcaggtggaggcg 226 |||||||||||||||||||| Sbjct: 1898505 cggccgagcaggtggaggcg 1898524 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,205,204 Number of Sequences: 3902068 Number of extensions: 1205204 Number of successful extensions: 28736 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 52 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 27581 Number of HSP's gapped (non-prelim): 1150 length of query: 239 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 217 effective length of database: 17,147,199,772 effective search space: 3720942350524 effective search space used: 3720942350524 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
