Clone Name | bart08a08 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 111 bits (56), Expect = 2e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 276 agccatggggtcaggggactggttcaagaccatcatcagcaagaagaagtcgaaacgcgg 335 |||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| || Sbjct: 2855269 agccatggggtctggggactggttcaagacgatcatcagcaagaagaagtctaaacgtgg 2855328 Query: 336 caagtcaaagcacgca 351 ||||||||| |||||| Sbjct: 2855329 caagtcaaaacacgca 2855344 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 ccgccgccgccgccccgccac 170 ||||||||||||||||||||| Sbjct: 27843873 ccgccgccgccgccccgccac 27843853 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 cgccgccgccgccccgccacg 171 ||||||||||||||||||||| Sbjct: 11970562 cgccgccgccgccccgccacg 11970582 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 cgccgccgccgccccgccacg 171 ||||||||||||||||||||| Sbjct: 11970518 cgccgccgccgccccgccacg 11970538
>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085L11 Length = 148142 Score = 111 bits (56), Expect = 2e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 276 agccatggggtcaggggactggttcaagaccatcatcagcaagaagaagtcgaaacgcgg 335 |||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| || Sbjct: 98750 agccatggggtctggggactggttcaagacgatcatcagcaagaagaagtctaaacgtgg 98809 Query: 336 caagtcaaagcacgca 351 ||||||||| |||||| Sbjct: 98810 caagtcaaaacacgca 98825
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046E09 Length = 146776 Score = 111 bits (56), Expect = 2e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 276 agccatggggtcaggggactggttcaagaccatcatcagcaagaagaagtcgaaacgcgg 335 |||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| || Sbjct: 15415 agccatggggtctggggactggttcaagacgatcatcagcaagaagaagtctaaacgtgg 15474 Query: 336 caagtcaaagcacgca 351 ||||||||| |||||| Sbjct: 15475 caagtcaaaacacgca 15490
>dbj|AK099462.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023F20, full insert sequence Length = 1616 Score = 111 bits (56), Expect = 2e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 276 agccatggggtcaggggactggttcaagaccatcatcagcaagaagaagtcgaaacgcgg 335 |||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| || Sbjct: 249 agccatggggtctggggactggttcaagacgatcatcagcaagaagaagtctaaacgtgg 308 Query: 336 caagtcaaagcacgca 351 ||||||||| |||||| Sbjct: 309 caagtcaaaacacgca 324
>gb|AY106710.1| Zea mays PCO131654 mRNA sequence Length = 797 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 276 agccatggggtcaggggactggttcaagaccatcatcagcaagaagaagtcgaaacgcgg 335 |||||||||||| ||||||||||||||||| |||||||||||||| || ||||| || || Sbjct: 233 agccatggggtccggggactggttcaagacgatcatcagcaagaaaaaatcgaagcgggg 292 Query: 336 caagtcaaagcacgca 351 ||||||||||||||| Sbjct: 293 aaagtcaaagcacgca 308
>ref|XM_467671.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2168 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 147 cgaccgccgccgccgccccgcc 168 |||||||||||||||||||||| Sbjct: 1459 cgaccgccgccgccgccccgcc 1480
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 cgaccgccgccgccgccccgcc 168 |||||||||||||||||||||| Sbjct: 30755892 cgaccgccgccgccgccccgcc 30755871 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 ccgccgccgccgccccgccac 170 ||||||||||||||||||||| Sbjct: 24918262 ccgccgccgccgccccgccac 24918242 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 ctcgactcgaccgccgccgccgcc 163 |||||| ||||||||||||||||| Sbjct: 2084935 ctcgacgcgaccgccgccgccgcc 2084912
>dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0487D09 Length = 161531 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 cgaccgccgccgccgccccgcc 168 |||||||||||||||||||||| Sbjct: 96039 cgaccgccgccgccgccccgcc 96018
>dbj|AK099700.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075C24, full insert sequence Length = 2167 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 147 cgaccgccgccgccgccccgcc 168 |||||||||||||||||||||| Sbjct: 1459 cgaccgccgccgccgccccgcc 1480
>emb|AL591703.14| Mouse DNA sequence from clone RP23-448P12 on chromosome 2, complete sequence Length = 89080 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 255 ccaactcctggtggaagaagcagcca 280 |||||||||||||| ||||||||||| Sbjct: 40036 ccaactcctggtgggagaagcagcca 40061
>ref|XM_466826.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1910 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 ccgccgccgccgccccgccac 170 ||||||||||||||||||||| Sbjct: 248 ccgccgccgccgccccgccac 228
>gb|AC164077.5| Mus musculus chromosome 3, clone RP24-352M15, complete sequence Length = 159925 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 aggggactggttcaagaccat 308 ||||||||||||||||||||| Sbjct: 49692 aggggactggttcaagaccat 49672
>gb|AY619525.1| Daphnia pulicaria clone WFms0000517 microsatellite marker Dp500 sequence Length = 267 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 gactcgaccgccgccgccgcc 163 ||||||||||||||||||||| Sbjct: 166 gactcgaccgccgccgccgcc 146
>gb|AY526388.1| Arachis hypogaea clone PM632 microsatellite sequence Length = 349 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 ccgccgccgccgccccgccac 170 ||||||||||||||||||||| Sbjct: 132 ccgccgccgccgccccgccac 152
>gb|AC004983.3| Homo sapiens PAC clone RP5-1163J12 from 7, complete sequence Length = 124821 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 300 caagaccatcatcagcaagaagaag 324 ||||||||||| ||||||||||||| Sbjct: 37342 caagaccatcaccagcaagaagaag 37366
>gb|AC079882.6| Homo sapiens BAC clone RP11-577O18 from 7, complete sequence Length = 59427 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 300 caagaccatcatcagcaagaagaag 324 ||||||||||| ||||||||||||| Sbjct: 11783 caagaccatcaccagcaagaagaag 11807
>gb|BC044242.1| Homo sapiens hypothetical protein LOC285927, mRNA (cDNA clone MGC:50833 IMAGE:5753714), complete cds Length = 3183 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 300 caagaccatcatcagcaagaagaag 324 ||||||||||| ||||||||||||| Sbjct: 2196 caagaccatcaccagcaagaagaag 2220
>gb|BC034495.1| Homo sapiens hypothetical protein LOC222967, mRNA (cDNA clone MGC:26728 IMAGE:4825868), complete cds Length = 3125 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 300 caagaccatcatcagcaagaagaag 324 ||||||||||| ||||||||||||| Sbjct: 2854 caagaccatcaccagcaagaagaag 2878
>dbj|AK093411.1| Homo sapiens cDNA FLJ36092 fis, clone TESTI2020525, weakly similar to Phosphatidylinositol-4-phosphate 5-kinase homolog T3K9.2 Length = 2161 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 300 caagaccatcatcagcaagaagaag 324 ||||||||||| ||||||||||||| Sbjct: 2051 caagaccatcaccagcaagaagaag 2075
>ref|NM_173565.1| Homo sapiens hypothetical protein LOC222967 (LOC222967), mRNA Length = 3125 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 300 caagaccatcatcagcaagaagaag 324 ||||||||||| ||||||||||||| Sbjct: 2854 caagaccatcaccagcaagaagaag 2878
>ref|XM_942307.1| PREDICTED: Homo sapiens hypothetical protein LOC285927 (LOC285927), mRNA Length = 935 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 300 caagaccatcatcagcaagaagaag 324 ||||||||||| ||||||||||||| Sbjct: 174 caagaccatcaccagcaagaagaag 198
>gb|AF151801.1|AF151801 Homo sapiens CGI-43 protein mRNA, complete cds Length = 2457 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 300 caagaccatcatcagcaagaagaag 324 ||||||||||| ||||||||||||| Sbjct: 2297 caagaccatcaccagcaagaagaag 2273
>dbj|AP006177.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0734C01 Length = 163208 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 cgccgccgccgccccgccacg 171 ||||||||||||||||||||| Sbjct: 129917 cgccgccgccgccccgccacg 129937 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 cgccgccgccgccccgccacg 171 ||||||||||||||||||||| Sbjct: 129873 cgccgccgccgccccgccacg 129893
>dbj|AP005968.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1156C07 Length = 182153 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 cgccgccgccgccccgccacg 171 ||||||||||||||||||||| Sbjct: 19425 cgccgccgccgccccgccacg 19445 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 cgccgccgccgccccgccacg 171 ||||||||||||||||||||| Sbjct: 19381 cgccgccgccgccccgccacg 19401
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710B08 Length = 186991 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 ccgccgccgccgccccgccac 170 ||||||||||||||||||||| Sbjct: 146382 ccgccgccgccgccccgccac 146362
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 ccgccgccgccgccccgccac 170 ||||||||||||||||||||| Sbjct: 79545 ccgccgccgccgccccgccac 79525
>dbj|AK120845.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022M20, full insert sequence Length = 1908 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 ccgccgccgccgccccgccac 170 ||||||||||||||||||||| Sbjct: 249 ccgccgccgccgccccgccac 229
>dbj|AK107560.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-B08, full insert sequence Length = 1038 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 ccgccgccgccgccccgccac 170 ||||||||||||||||||||| Sbjct: 513 ccgccgccgccgccccgccac 533
>dbj|AK101184.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029I12, full insert sequence Length = 2148 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 ccgccgccgccgccccgccac 170 ||||||||||||||||||||| Sbjct: 453 ccgccgccgccgccccgccac 473
>emb|AL845265.20| Mouse DNA sequence from clone RP23-158O8 on chromosome 2, complete sequence Length = 195031 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 gccatggggtcaggggactgg 297 ||||||||||||||||||||| Sbjct: 32002 gccatggggtcaggggactgg 32022
>emb|CR854964.10| Zebrafish DNA sequence from clone DKEY-58J19 in linkage group 1, complete sequence Length = 180969 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 cctgaggccaactcctggtgg 268 ||||||||||||||||||||| Sbjct: 153991 cctgaggccaactcctggtgg 153971
>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome Length = 1796226 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 catggggtcaggggactggt 298 |||||||||||||||||||| Sbjct: 954638 catggggtcaggggactggt 954657
>gb|AC115634.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1653_D06, complete sequence Length = 71193 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 accgccgccgccgccccgcc 168 |||||||||||||||||||| Sbjct: 22245 accgccgccgccgccccgcc 22264
>ref|XM_464082.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1088 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 ctcgactcgaccgccgccgccgcc 163 |||||| ||||||||||||||||| Sbjct: 338 ctcgacgcgaccgccgccgccgcc 361
>ref|NM_197758.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0089A17.18), mRNA Length = 783 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 accgccgccgccgccccgcc 168 |||||||||||||||||||| Sbjct: 71 accgccgccgccgccccgcc 52
>ref|XM_469661.1| Oryza sativa (japonica cultivar-group), mRNA Length = 627 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ctcgaccgccgccgccgccc 164 |||||||||||||||||||| Sbjct: 115 ctcgaccgccgccgccgccc 96
>ref|XM_513692.1| PREDICTED: Pan troglodytes similar to D-3-phosphoglycerate dehydrogenase (3-PGDH) (LOC457168), mRNA Length = 3045 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 cccctctcccccacgctgcc 25 |||||||||||||||||||| Sbjct: 2529 cccctctcccccacgctgcc 2548
>ref|XM_473365.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 690 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cgccgccgccgccccgccac 170 |||||||||||||||||||| Sbjct: 51 cgccgccgccgccccgccac 32
>gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_C08, complete sequence Length = 132017 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 54 cgtccgttgcttccgacgggcggctccg 81 |||||||||||| || |||||||||||| Sbjct: 128438 cgtccgttgcttgcgccgggcggctccg 128411
>gb|AY687449.1| Uncultured bacterium clone HZ14 genomic sequence Length = 7482 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 gttcaagaccatcatcagca 316 |||||||||||||||||||| Sbjct: 4407 gttcaagaccatcatcagca 4388
>gb|AC107772.19| Mus musculus chromosome 15, clone RP23-102L5, complete sequence Length = 194704 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 ggttcaagaccatcatcagc 315 |||||||||||||||||||| Sbjct: 59360 ggttcaagaccatcatcagc 59341
>gb|AC135423.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015C02, complete sequence Length = 147407 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 accgccgccgccgccccgcc 168 |||||||||||||||||||| Sbjct: 29095 accgccgccgccgccccgcc 29076
>gb|AC121364.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052E20, complete sequence Length = 162434 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 accgccgccgccgccccgcc 168 |||||||||||||||||||| Sbjct: 70628 accgccgccgccgccccgcc 70609
>gb|AC133609.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0002C14, complete sequence Length = 154029 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ctcgaccgccgccgccgccc 164 |||||||||||||||||||| Sbjct: 21822 ctcgaccgccgccgccgccc 21803
>ref|XM_871185.1| PREDICTED: Bos taurus similar to mitochondrial carrier homolog 1 (LOC618868), mRNA Length = 366 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 ctcgaccgccgccgccgccccgcc 168 ||||||| |||||||||||||||| Sbjct: 111 ctcgacccccgccgccgccccgcc 88
>ref|XM_363832.1| Magnaporthe grisea 70-15 hypothetical protein (MG01758.4) partial mRNA Length = 1113 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 accgccgccgccgccccgcc 168 |||||||||||||||||||| Sbjct: 93 accgccgccgccgccccgcc 74
>gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0084P24, complete sequence Length = 148784 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 54 cgtccgttgcttccgacgggcggctccg 81 |||||||||||| || |||||||||||| Sbjct: 78050 cgtccgttgcttgcgccgggcggctccg 78023
>ref|NM_015263.1| Homo sapiens Dmx-like 2 (DMXL2), mRNA Length = 9609 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ctcgaccgccgccgccgccc 164 |||||||||||||||||||| Sbjct: 25 ctcgaccgccgccgccgccc 6
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ctcgaccgccgccgccgccc 164 |||||||||||||||||||| Sbjct: 30063848 ctcgaccgccgccgccgccc 30063867
>gb|AY458646.2| Uncultured bacterium 578 clone EBAC080-L31E09 genomic sequence Length = 78078 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 actcgaccgccgccgccgcc 163 |||||||||||||||||||| Sbjct: 17436 actcgaccgccgccgccgcc 17455
>gb|AC003074.3| Homo sapiens PAC clone RP4-596O9 from 7, complete sequence Length = 143878 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggaatctgaagaacacaaac 237 |||||||||||||||||||| Sbjct: 77080 ggaatctgaagaacacaaac 77061
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ctcgaccgccgccgccgccc 164 |||||||||||||||||||| Sbjct: 160047 ctcgaccgccgccgccgccc 160028
>gb|AC116677.11| Mus musculus chromosome 3, clone RP23-111M12, complete sequence Length = 214206 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 tggaagaagcagccatgggg 285 |||||||||||||||||||| Sbjct: 143495 tggaagaagcagccatgggg 143514
>gb|AY330169.1| Cyprinus carpio nucleolin gene, complete cds Length = 8850 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 caaaggaggaatctgaagaa 230 |||||||||||||||||||| Sbjct: 2712 caaaggaggaatctgaagaa 2731
>emb|AL589734.5| Human DNA sequence from clone RP4-683H9 on chromosome 1 Contains the 3' end of the PHGDH gene for phosphoglycerate dehydrogenase and the HMGCS2 gene for 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 (mitochondrial), complete sequence Length = 65882 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 cccctctcccccacgctgcc 25 |||||||||||||||||||| Sbjct: 17214 cccctctcccccacgctgcc 17233
>gb|AY330168.1| Cyprinus carpio nucleolin 3 mRNA, complete cds Length = 2595 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 caaaggaggaatctgaagaa 230 |||||||||||||||||||| Sbjct: 590 caaaggaggaatctgaagaa 609
>gb|AY330167.1| Cyprinus carpio nucleolin 2 mRNA, complete cds Length = 2619 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 caaaggaggaatctgaagaa 230 |||||||||||||||||||| Sbjct: 590 caaaggaggaatctgaagaa 609
>emb|AL133260.12| Human DNA sequence from clone RP1-292B18 on chromosome 6q24.3-25.3 Contains a 60S ribosomal protein L32 (RPL32) pseudogene, the 3' end of the gene for a novel protein similar to C1-tetrahydrofolate synthases (contains DKFZP586G1517 protein and FLJ21145, contains a tetrahydrofolate dehydrogenase/cyclohydrolase domain), part of a novel gene and a novel gene, complete sequence Length = 109310 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 gcaacgctccttcttccagc 423 |||||||||||||||||||| Sbjct: 64096 gcaacgctccttcttccagc 64077
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ctcgaccgccgccgccgccc 164 |||||||||||||||||||| Sbjct: 43753 ctcgaccgccgccgccgccc 43734
>emb|AL606695.3|OSJN00112 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0103I08, complete sequence Length = 140449 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cgccgccgccgccccgccac 170 |||||||||||||||||||| Sbjct: 40434 cgccgccgccgccccgccac 40415
>emb|AJ720998.1| Gallus gallus mRNA for hypothetical protein, clone 32b17 Length = 2058 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccgccgccgccgccccgcca 169 |||||||||||||||||||| Sbjct: 183 ccgccgccgccgccccgcca 164
>gb|AF389880.1| Homo sapiens rabconnectin mRNA, complete cds Length = 9609 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ctcgaccgccgccgccgccc 164 |||||||||||||||||||| Sbjct: 25 ctcgaccgccgccgccgccc 6
>ref|XM_938581.1| PREDICTED: Homo sapiens pleckstrin homology domain containing, family M (with RUN domain) member 2 (PLEKHM2), mRNA Length = 4153 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 accgccgccgccgccccgcc 168 |||||||||||||||||||| Sbjct: 231 accgccgccgccgccccgcc 212
>ref|XM_290944.4| PREDICTED: Homo sapiens pleckstrin homology domain containing, family M (with RUN domain) member 2 (PLEKHM2), mRNA Length = 4153 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 accgccgccgccgccccgcc 168 |||||||||||||||||||| Sbjct: 231 accgccgccgccgccccgcc 212
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete sequence Length = 132927 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 accgccgccgccgccccgcc 168 |||||||||||||||||||| Sbjct: 106167 accgccgccgccgccccgcc 106186
>emb|CR388843.1| Gallus gallus finished cDNA, clone ChEST192g9 Length = 1093 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccgccgccgccgccccgcca 169 |||||||||||||||||||| Sbjct: 22 ccgccgccgccgccccgcca 3
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cgaccgccgccgccgccccg 166 |||||||||||||||||||| Sbjct: 40519 cgaccgccgccgccgccccg 40500
>gb|AY224440.1| Oryza sativa (japonica cultivar-group) isolate 22834 homeodomain leucine zipper protein-like protein mRNA, partial cds Length = 837 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cgccgccgccgccccgccac 170 |||||||||||||||||||| Sbjct: 198 cgccgccgccgccccgccac 179
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cgccgccgccgccccgccac 170 |||||||||||||||||||| Sbjct: 27097791 cgccgccgccgccccgccac 27097772
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ctcgaccgccgccgccgccc 164 |||||||||||||||||||| Sbjct: 26113496 ctcgaccgccgccgccgccc 26113477
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 accgccgccgccgccccgcc 168 |||||||||||||||||||| Sbjct: 21674263 accgccgccgccgccccgcc 21674282
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccgccgccgccgccccgcca 169 |||||||||||||||||||| Sbjct: 14758128 ccgccgccgccgccccgcca 14758109
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 accgccgccgccgccccgcc 168 |||||||||||||||||||| Sbjct: 8666226 accgccgccgccgccccgcc 8666207
>gb|AC020892.7|AC020892 Homo sapiens chromosome 15 clone RP11-313P18 map 15q21.2, complete sequence Length = 186253 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ctcgaccgccgccgccgccc 164 |||||||||||||||||||| Sbjct: 87115 ctcgaccgccgccgccgccc 87134
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 accgccgccgccgccccgcc 168 |||||||||||||||||||| Sbjct: 22966615 accgccgccgccgccccgcc 22966596 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 54 cgtccgttgcttccgacgggcggctccg 81 |||||||||||| || |||||||||||| Sbjct: 20239778 cgtccgttgcttgcgccgggcggctccg 20239751 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 accgccgccgccgccccgcc 168 |||||||||||||||||||| Sbjct: 10805313 accgccgccgccgccccgcc 10805332
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ctcgaccgccgccgccgccc 164 |||||||||||||||||||| Sbjct: 30155420 ctcgaccgccgccgccgccc 30155439
>gb|AC158180.2| Selaginella moellendorffii chromosome JGIASXY-5A14, complete sequence Length = 36906 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 396 aaagcccagcaacgctccttcttccagc 423 |||||| |||||||||||| |||||||| Sbjct: 28985 aaagcctagcaacgctcctccttccagc 29012
>gb|AC098809.3| Papio anubis clone RP41-201J11, complete sequence Length = 74237 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggaatctgaagaacacaaac 237 |||||||||||||||||||| Sbjct: 66256 ggaatctgaagaacacaaac 66237
>gb|AC098812.3| Papio anubis clone RP41-440G22, complete sequence Length = 171720 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggaatctgaagaacacaaac 237 |||||||||||||||||||| Sbjct: 21954 ggaatctgaagaacacaaac 21935
>ref|XM_238103.3| PREDICTED: Rattus norvegicus AKT1 substrate 1 (proline-rich) (predicted) (Akt1s1_predicted), mRNA Length = 839 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 accgccgccgccgccccgcc 168 |||||||||||||||||||| Sbjct: 165 accgccgccgccgccccgcc 184
>gb|AY190944.1| Drosophila pseudoobscura clone DPSF01_8_E17 (D1422) genomic sequence Length = 42627 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 gcccccctctcccccacgct 22 |||||||||||||||||||| Sbjct: 2478 gcccccctctcccccacgct 2497
>dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0707C02 Length = 163609 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccgccgccgccgccccgcca 169 |||||||||||||||||||| Sbjct: 43517 ccgccgccgccgccccgcca 43498
>dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0087F21 Length = 187401 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 accgccgccgccgccccgcc 168 |||||||||||||||||||| Sbjct: 178137 accgccgccgccgccccgcc 178118
>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0026E05 Length = 159860 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 ctcgactcgaccgccgccgccgcc 163 |||||| ||||||||||||||||| Sbjct: 135143 ctcgacgcgaccgccgccgccgcc 135120
>dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0070J06 Length = 142303 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 accgccgccgccgccccgcc 168 |||||||||||||||||||| Sbjct: 9205 accgccgccgccgccccgcc 9186
>dbj|AK000156.1| Homo sapiens cDNA FLJ20149 fis, clone COL08213 Length = 1957 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ctcgaccgccgccgccgccc 164 |||||||||||||||||||| Sbjct: 44 ctcgaccgccgccgccgccc 25
>ref|NM_001012936.1| Gallus gallus ankyrin repeat and SOCS box-containing 8 (ASB8), mRNA Length = 2058 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccgccgccgccgccccgcca 169 |||||||||||||||||||| Sbjct: 183 ccgccgccgccgccccgcca 164
>dbj|AK069500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022H01, full insert sequence Length = 1286 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ccgccgccgccgccccgcca 169 |||||||||||||||||||| Sbjct: 717 ccgccgccgccgccccgcca 736
>dbj|AK068554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155B11, full insert sequence Length = 1782 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 accgccgccgccgccccgcc 168 |||||||||||||||||||| Sbjct: 169 accgccgccgccgccccgcc 188
>dbj|AK065722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038J22, full insert sequence Length = 1088 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 ctcgactcgaccgccgccgccgcc 163 |||||| ||||||||||||||||| Sbjct: 338 ctcgacgcgaccgccgccgccgcc 361
>emb|CR626877.10| Zebrafish DNA sequence from clone DKEYP-114F9 in linkage group 19, complete sequence Length = 173824 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 cagcaagggaattttcaaag 215 |||||||||||||||||||| Sbjct: 168645 cagcaagggaattttcaaag 168626
>gb|AY105539.1| Zea mays PCO068158 mRNA sequence Length = 632 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ccgccgccgccgccccgcca 169 |||||||||||||||||||| Sbjct: 302 ccgccgccgccgccccgcca 321
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 accgccgccgccgccccgcc 168 |||||||||||||||||||| Sbjct: 21685926 accgccgccgccgccccgcc 21685945
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ctcgaccgccgccgccgccc 164 |||||||||||||||||||| Sbjct: 26432192 ctcgaccgccgccgccgccc 26432173
>emb|AL121992.24|HSDJ680D5 Human DNA sequence from clone RP4-680D5 on chromosome 1p36.13-36.31 Contains the 3' end of the gene for a novel DnaJ domain-containing protein (KIAA0962, FLJ13743, FLJ12468), the AGMAT gene for agmatine ureohydrolase (agmatinase), a novel gene (FLJ34180), a novel pseudogene similar to Mus musculus ethanol induced 6 (Etohi6), a CD24 antigen (small cell lung carcinoma cluster 4 antigen) (CD24) pseudogene, the gene for DNA-damage inducible protein 2 (DDI2), the RSC1A1 gene for regulatory solute carrier protein family 1 member 1 and the 5' end of the gene for a novel RUN and PH domain-containing protein (KIAA0842), complete sequence Length = 170399 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 accgccgccgccgccccgcc 168 |||||||||||||||||||| Sbjct: 148701 accgccgccgccgccccgcc 148682
>emb|AL807756.9| Mouse DNA sequence from clone RP23-36M9 on chromosome 4, complete sequence Length = 247528 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 432 tgaagaacatgctgcactggaaga 455 ||||||||| |||||||||||||| Sbjct: 180893 tgaagaacacgctgcactggaaga 180870
>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome Length = 1796846 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 catggggtcaggggactggt 298 |||||||||||||||||||| Sbjct: 948632 catggggtcaggggactggt 948651 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,582,957 Number of Sequences: 3902068 Number of extensions: 4582957 Number of successful extensions: 228387 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 221124 Number of HSP's gapped (non-prelim): 7260 length of query: 457 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 435 effective length of database: 17,147,199,772 effective search space: 7459031900820 effective search space used: 7459031900820 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)