>FLA7_ARATH (Q9SJ81) Fasciclin-like arabinogalactan protein 7 precursor|
          Length = 254

 Score =  113 bits (283), Expect = 2e-25
 Identities = 56/83 (67%), Positives = 68/83 (81%)
 Frame = +1

Query: 247 HVDLADLLSVAGPFHTFLDYLQKTSVLETFQSKANDTKEEGITMFVPKDSAFAALRTTTF 426
           +V+L +LLSVAGPFHTFLDYL  T V+ETFQ++AN+T EEGIT+FVPKD AF A +    
Sbjct: 44  NVNLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNT-EEGITIFVPKDDAFKAQKNPPL 102

Query: 427 ANLTSDQLKTLMLYHALPKYYSL 495
           +NLT DQLK L+L+HALP YYSL
Sbjct: 103 SNLTKDQLKQLVLFHALPHYYSL 125

>FLA10_ARATH (Q9LZX4) Fasciclin-like arabinogalactan protein 10 precursor|
          Length = 422

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 30/78 (38%), Positives = 45/78 (57%)
 Frame = +1

Query: 253 DLADLLSVAGPFHTFLDYLQKTSVLETFQSKANDTKEEGITMFVPKDSAFAALRTTTFAN 432
           ++  LL  AG   TF + L  + V++TF+S    T E+G+T+F P D AF A       N
Sbjct: 190 NITGLLEKAG-CKTFANLLVSSGVIKTFES----TVEKGLTVFAPSDEAFKARGVPDLTN 244

Query: 433 LTSDQLKTLMLYHALPKY 486
           LT  ++ +L+ YHAL +Y
Sbjct: 245 LTQAEVVSLLEYHALAEY 262

>FLA8_ARATH (O22126) Fasciclin-like arabinogalactan protein 8 precursor|
           (AtAGP8)
          Length = 420

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 28/78 (35%), Positives = 43/78 (55%)
 Frame = +1

Query: 253 DLADLLSVAGPFHTFLDYLQKTSVLETFQSKANDTKEEGITMFVPKDSAFAALRTTTFAN 432
           ++  LL  AG   TF + L  + VL+T++S      E+G+T+F P D AF A        
Sbjct: 189 NITGLLEKAG-CKTFANLLVSSGVLKTYESAV----EKGLTVFAPSDEAFKAEGVPDLTK 243

Query: 433 LTSDQLKTLMLYHALPKY 486
           LT  ++ +L+ YHAL +Y
Sbjct: 244 LTQAEVVSLLEYHALAEY 261

>IF2_THEFY (Q47RV1) Translation initiation factor IF-2|
          Length = 955

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = -2

Query: 283 GRPRSGDPRGPHGAAPEPALGTAGGRPPAEQGG 185
           G PR   P+ P   AP P  GTAGGRP +  GG
Sbjct: 208 GPPR---PQAPRPQAPRPGPGTAGGRPGSSAGG 237

>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I|
          Length = 536

 Score = 32.0 bits (71), Expect = 0.94
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
 Frame = -2

Query: 289 GTGRPRSGDPRGPHGAAPEPALGTAGGRPPAEQ-----GGSSSSA 170
           G+  P +G+       AP P+ G  G  PPA       GGSS+SA
Sbjct: 315 GSPTPAAGNNTNGRPVAPRPSAGAGGANPPAASQPGLLGGSSNSA 359

>CTG1B_HUMAN (P78358) Cancer/testis antigen 1B (L antigen family member 2)|
           (LAGE-2 protein) (Autoimmunogenic cancer/testis antigen
           NY-ESO-1)
          Length = 180

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = -2

Query: 289 GTGRPRSGDPRGPHGAAPEPALGTAGGRPPAEQGGSSS 176
           G G   +   RGP GA    A G  GG P    GG++S
Sbjct: 33  GPGEAGATGGRGPRGAGAARASGPGGGAPRGPHGGAAS 70

>CTAG2_HUMAN (O75638) Cancer/testis antigen 2 (L antigen family member 1)|
           (LAGE-1 protein) (ESO-2 protein)
          Length = 210

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -2

Query: 289 GTGRPRSGDPRGPHGAAPEPALGTAGGRPPAEQGGSSSS 173
           G G   +   RGP GA    A G  GG P    GG++S+
Sbjct: 33  GPGEAGATGGRGPRGAGAARASGPRGGAPRGPHGGAASA 71

>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2|
          Length = 1125

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 286 TGRPRSGDPRGPHGAAPEPALGTAGGRPPAEQGGSSSSA 170
           TGRP +  PR P G +     G+ G  PP E+  ++ +A
Sbjct: 367 TGRPGTPPPRRPDGTSVGTRGGSEGATPPVERTATAPTA 405

>FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan protein 1 precursor|
          Length = 424

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +1

Query: 352 DTKEEGITMFVPKDSAFAALRTTTFANLTSDQLKTLMLYHALPKYYSL 495
           ++ E G+T+F P D A        + NLT+ + +  + + A+P YYS+
Sbjct: 215 ESLEGGMTVFCPGDDAMKGF-LPKYKNLTAPKKEAFLDFLAVPTYYSM 261

>PCSK7_RAT (Q62849) Proprotein convertase subtilisin/kexin type 7 precursor|
           (EC 3.4.21.-) (Proprotein convertase PC7)
           (Subtilisin/kexin-like protease PC7) (Prohormone
           convertase PC7) (rPC7)
          Length = 783

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = -1

Query: 449 SWSLVRLA----NVVVLSAAKAESLGTNMVIPSSLVSFALLWNVSRT 321
           +W LV  A    +V  L++  +  L  N  +P S  S  +LWNVSRT
Sbjct: 468 AWRLVNAAKIWTSVPYLASYVSPMLKENKAVPRSPHSLEVLWNVSRT 514

>PCSK7_MOUSE (Q61139) Proprotein convertase subtilisin/kexin type 7 precursor|
           (EC 3.4.21.-) (Proprotein convertase PC7)
           (Subtilisin/kexin-like protease PC7) (Prohormone
           convertase PC7) (Subtilisin-like proprotein convertase
           7) (SPC7)
          Length = 770

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = -1

Query: 449 SWSLVRLA----NVVVLSAAKAESLGTNMVIPSSLVSFALLWNVSRT 321
           +W LV  A    +V  L++  +  L  N  +P S  S  +LWNVSRT
Sbjct: 468 AWRLVNAAKIWTSVPYLASYVSPMLKENKAVPRSPHSLEVLWNVSRT 514

>YH35_SYNP2 (O33752) Hypothetical protein sll1735 homolog|
          Length = 133

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +1

Query: 286 FHTFLDYLQKTSVLETFQSKANDTKEEGITMFVPKDSAFAALRTTTFANLTSD--QLKTL 459
           F T +  +Q   ++ET   + +       T+F P D AFA L   T   L  +  QL  +
Sbjct: 14  FSTLVAAVQAAGLVETLAGEGD------FTVFAPNDDAFAKLPPGTIQTLVQNPPQLARI 67

Query: 460 MLYH 471
           + YH
Sbjct: 68  LTYH 71

>CU093_HUMAN (P59091) Protein C21orf93|
          Length = 139

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 18/42 (42%), Positives = 20/42 (47%)
 Frame = +3

Query: 273 RGRPVPHLPGLPPEDQRPGDVPEQGERHQGGGDHHVRAQGLC 398
           RG  +PH  GLP    RP  V  Q E  Q     HV + GLC
Sbjct: 82  RGPGLPHTHGLPA---RPSHVRHQTEPVQVASRWHVPSDGLC 120

>Y1483_SYNY3 (P74615) Hypothetical protein sll1483 precursor|
          Length = 180

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = +1

Query: 361 EEGITMFVPKDSAFAALRTTTFANL----TSDQLKTLMLYHALP 480
           E   T+F P + AFAAL   T  +L      D+L  ++ YH +P
Sbjct: 77  EGPFTVFAPTNDAFAALPAGTVESLLLPENKDKLVKILTYHVVP 120

>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2|
          Length = 969

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 277 PRSGDPR-GPHGAAPEPALGTAGGRPPAEQGG 185
           P  G PR GP   AP P   T G RP A QGG
Sbjct: 207 PAQGGPRPGPGQGAPRPG-ATPGPRPAAAQGG 237

>RELA_STRAT (O85709) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 841

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = -2

Query: 280 RPRSGDPRGPHGAAPEPALGTAGGRPPAEQGGSSSSAR 167
           RP+   P  P    P P    A G+P A  GGSS+  R
Sbjct: 50  RPKPAPPERPR---PPPPRARAAGQPAARSGGSSNRVR 84

>GPR62_HUMAN (Q9BZJ7) Probable G-protein coupled receptor 62 (hGPCR8)|
          Length = 368

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 18/36 (50%), Positives = 18/36 (50%)
 Frame = -2

Query: 280 RPRSGDPRGPHGAAPEPALGTAGGRPPAEQGGSSSS 173
           RP  G   GP   APE     AGGR PA QG   SS
Sbjct: 332 RPPEGPAVGP-SEAPEQTPELAGGRSPAYQGPPESS 366

>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (EC 3.6.1.-)|
            (ATP-dependent helicase xnp-1) (X-linked nuclear protein
            1)
          Length = 1359

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -1

Query: 419  VVLSAAKAESLGTNMVIPSSLVSFALLWNVS 327
            ++L + +A SLGTNMV  + ++ F   WN S
Sbjct: 1045 LMLISTRAGSLGTNMVAANRVIIFDACWNPS 1075

>BARH1_DROME (Q24255) Homeobox protein B-H1 (Homeobox protein BarH1)|
          Length = 544

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -2

Query: 271 SGDPRGPHGAAPEPALGTAGGRPPA 197
           + +P GPH  AP P++G  GG PP+
Sbjct: 471 AANPGGPHPVAPPPSVG--GGSPPS 493

>RS10A_ARATH (Q9SW09) 40S ribosomal protein S10-1|
          Length = 177

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -2

Query: 283 GRPRSGDPRGPHGAAPEPALGTAGGRPPAEQGGSSSSA 170
           G PR GD +G   A  +P+    GGRP   +G    SA
Sbjct: 131 GGPRGGDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSA 168

>GTPB1_HUMAN (O00178) GTP-binding protein 1 (G-protein 1) (GP-1) (GP1)|
          Length = 584

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 321 RPGDVPEQGERHQGGGDHHVRAQGLCLRGA 410
           +P   P  G R +GG  H V++QG C+  A
Sbjct: 552 QPQPKPSSGGRRRGGQRHKVKSQGACVTPA 581

>COL2_CAEEL (P17656) Cuticle collagen 2 precursor|
          Length = 301

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -2

Query: 289 GTGRPRSGDPRGPHGAAPEP-ALGTAGGRPPAEQGG 185
           GTG P    P+GP GAA  P A G  GG   A + G
Sbjct: 239 GTGGPGPAGPKGPPGAAGAPGADGNPGGPGTAGKPG 274

>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 14/40 (35%), Positives = 16/40 (40%)
 Frame = -2

Query: 286 TGRPRSGDPRGPHGAAPEPALGTAGGRPPAEQGGSSSSAR 167
           T   RS  P   H  +P P        PP  +G SSS  R
Sbjct: 684 TREARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASSSPQR 723

>KCNA5_MOUSE (Q61762) Potassium voltage-gated channel subfamily A member 5|
           (Voltage-gated potassium channel subunit Kv1.5) (KV1-5)
          Length = 602

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 276 GRPVPHLPGLPPEDQRPGDVPEQGERHQGGG 368
           GRP+P +P   P+ +RP    E+GE   G G
Sbjct: 64  GRPLPPMPQELPQPRRPSAEDEEGEGDPGLG 94


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,149,451
Number of Sequences: 219361
Number of extensions: 999540
Number of successful extensions: 5787
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5754
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3523384522
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)