ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart08a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KRUC_SHEEP (P26372) Keratin, ultra high-sulfur matrix protein (U... 31 1.8

>KRUC_SHEEP (P26372) Keratin, ultra high-sulfur matrix protein (UHS keratin)|
          Length = 182

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 378 GACSHTGSYVGRCTSTRGRSYSCGARGTGCG 286
           G+C  +    G C  ++G   SCG  G+GCG
Sbjct: 108 GSCGGSKGGCGSCGGSKGGCGSCGGCGSGCG 138


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,539,605
Number of Sequences: 219361
Number of extensions: 609978
Number of successful extensions: 1967
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1951
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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