ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart08a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 54 4e-04
2dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
3gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare str... 54 4e-04
4dbj|AK110597.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
5emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete ... 46 0.10
6gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 44 0.40
7emb|Z30324.1|SARECAG S.ambofaciens (DSM40697) recA gene 44 0.40
8gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 42 1.6
9gb|AC134346.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
10gb|AC136227.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
11ref|XM_864721.1| PREDICTED: Bos taurus similar to chromobox homo... 42 1.6
12gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 1.6
13gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.6
14emb|BX842649.1| Bdellovibrio bacteriovorus complete genome, stra... 42 1.6
15emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.6
16emb|BX640423.1| Bordetella parapertussis strain 12822, complete ... 42 1.6
17emb|BX640412.1| Bordetella pertussis strain Tohama I, complete g... 42 1.6
18emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.6
19dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
20dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
21dbj|AP004877.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
22dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.6
23ref|NM_184427.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
24ref|XM_512220.1| PREDICTED: Pan troglodytes LOC455532 (LOC455532... 40 6.3
25gb|AC093198.3| Drosophila melanogaster clone BACR03G24, complete... 40 6.3
26gb|AC006402.12| Drosophila melanogaster clone BACR08D17, complet... 40 6.3
27gb|AC183919.2| Pan troglodytes BAC clone CH251-691O9 from chromo... 40 6.3
28ref|XM_329540.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.3
29ref|XM_958332.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.3
30gb|AY436785.1| Homo sapiens plasticity related gene 2a mRNA, com... 40 6.3
31gb|AC004799.2| Homo sapiens chromosome 19, cosmid R33516, comple... 40 6.3
32gb|AF541282.1| Homo sapiens plasticity related gene 2 mRNA, comp... 40 6.3
33gb|AY304517.1| Homo sapiens lipid phosphate phosphatase-related ... 40 6.3
34gb|CP000088.1| Thermobifida fusca YX, complete genome 40 6.3
35emb|BX842594.1| Neurospora crassa DNA linkage group II BAC clone... 40 6.3
36emb|AL583919.1|MLEPRTN3 Mycobacterium leprae strain TN complete ... 40 6.3
37emb|AL356834.1|NCB11B22 Neurospora crassa DNA linkage group II B... 40 6.3
38emb|AL136596.1|HSM801570 Homo sapiens mRNA; cDNA DKFZp761F069 (f... 40 6.3
39ref|NM_024888.1| Homo sapiens plasticity-related gene 2 (PRG2), ... 40 6.3
40dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
41gb|AF357888.1| Homo sapiens PAP-2-like protein 2 (PHP2) mRNA, co... 40 6.3
42dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.3
43gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.3
44dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
45gb|AF077869.2|AF077869 Streptomyces argillaceus glycosyltransfer... 40 6.3
46gb|AE003666.6| Drosophila melanogaster chromosome 2L, section 75... 40 6.3
47emb|CR626857.1| Rice Cluster I (RC-I), uncultured archeon clone ... 40 6.3
48gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.3
49dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 6.3

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                          
Query: 390     gctgacgttcttcatgcacgacatcct 416
               |||||||||||||||||||||||||||
Sbjct: 9571732 gctgacgttcttcatgcacgacatcct 9571758



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                          
Query: 390     gctgacgttcttcatgcacgacatcct 416
               |||||||||||||||||||||||||||
Sbjct: 9569853 gctgacgttcttcatgcacgacatcct 9569879



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>gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0009C19, from chromosome 3, complete sequence
          Length = 131709

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                        
Query: 390   gctgacgttcttcatgcacgacatcct 416
             |||||||||||||||||||||||||||
Sbjct: 40954 gctgacgttcttcatgcacgacatcct 40928



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>dbj|AK110597.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-G01, full
           insert sequence
          Length = 1311

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 390 gctgacgttcttcatgcacgacatcct 416
           |||||||||||||||||||||||||||
Sbjct: 383 gctgacgttcttcatgcacgacatcct 409



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>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16
          Length = 348624

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 255    gcccgcgaccgcggcggtgatgc 277
              |||||||||||||||||||||||
Sbjct: 236463 gcccgcgaccgcggcggtgatgc 236441



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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 71      agatggccaaggcggcgctcta 92
               ||||||||||||||||||||||
Sbjct: 2172485 agatggccaaggcggcgctcta 2172506



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>emb|Z30324.1|SARECAG S.ambofaciens (DSM40697) recA gene
          Length = 1490

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 245  cggtgcccgcgcccgcgaccgc 266
            ||||||||||||||||||||||
Sbjct: 1258 cggtgcccgcgcccgcgaccgc 1279



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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 164     cgccgcctccggcagaggctcctcc 188
               ||||| |||||||||||||||||||
Sbjct: 1761354 cgccggctccggcagaggctcctcc 1761378



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>gb|AC134346.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0018A03,
             complete sequence
          Length = 146278

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 243   gccggtgcccgcgcccgcgaccgcggcgg 271
             ||||||||||| ||||||| |||||||||
Sbjct: 58508 gccggtgcccgtgcccgcgcccgcggcgg 58480



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>gb|AC136227.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0109A13,
              complete sequence
          Length = 134258

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 243    gccggtgcccgcgcccgcgaccgcggcgg 271
              ||||||||||| ||||||| |||||||||
Sbjct: 133934 gccggtgcccgtgcccgcgcccgcggcgg 133906



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>ref|XM_864721.1| PREDICTED: Bos taurus similar to chromobox homolog 4 (LOC613693),
           partial mRNA
          Length = 288

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 253 gcgcccgcgaccgcggcggtg 273
           |||||||||||||||||||||
Sbjct: 106 gcgcccgcgaccgcggcggtg 126



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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 242   tgccggtgcccgcgcccgcga 262
             |||||||||||||||||||||
Sbjct: 16829 tgccggtgcccgcgcccgcga 16809



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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 242    tgccggtgcccgcgcccgcga 262
              |||||||||||||||||||||
Sbjct: 820671 tgccggtgcccgcgcccgcga 820651



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>emb|BX842649.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 4/11
          Length = 349697

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 198   tccactgccggggccgaccga 218
             |||||||||||||||||||||
Sbjct: 81123 tccactgccggggccgaccga 81143



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>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16
          Length = 347356

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 202    ctgccggggccgaccgagcca 222
              |||||||||||||||||||||
Sbjct: 297153 ctgccggggccgaccgagcca 297173



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>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14
          Length = 348251

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 202    ctgccggggccgaccgagcca 222
              |||||||||||||||||||||
Sbjct: 301806 ctgccggggccgaccgagcca 301826



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>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12
          Length = 348171

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 202    ctgccggggccgaccgagcca 222
              |||||||||||||||||||||
Sbjct: 262126 ctgccggggccgaccgagcca 262146



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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 242    tgccggtgcccgcgcccgcga 262
              |||||||||||||||||||||
Sbjct: 663077 tgccggtgcccgcgcccgcga 663057



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 243      gccggtgcccgcgcccgcgaccgcggcgg 271
                ||||||||||| ||||||| |||||||||
Sbjct: 14907592 gccggtgcccgtgcccgcgcccgcggcgg 14907564



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 249      gcccgcgcccgcgaccgcggcggtg 273
                ||||||||||||| |||||||||||
Sbjct: 20191745 gcccgcgcccgcgcccgcggcggtg 20191769



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>dbj|AP004877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0472F10
          Length = 136076

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 249   gcccgcgcccgcgaccgcggcggtg 273
             ||||||||||||| |||||||||||
Sbjct: 65051 gcccgcgcccgcgcccgcggcggtg 65075



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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 243    gccggtgcccgcgcccgcgac 263
              |||||||||||||||||||||
Sbjct: 163946 gccggtgcccgcgcccgcgac 163926



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>ref|NM_184427.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1023

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 396 gttcttcatgcacgacatcctcgg 419
           |||||||||||| |||||||||||
Sbjct: 342 gttcttcatgcatgacatcctcgg 365



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>ref|XM_512220.1| PREDICTED: Pan troglodytes LOC455532 (LOC455532), mRNA
          Length = 2694

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 295 ggtgccgcgggcgccgcagg 314
           ||||||||||||||||||||
Sbjct: 861 ggtgccgcgggcgccgcagg 842



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>gb|AC093198.3| Drosophila melanogaster clone BACR03G24, complete sequence
          Length = 182901

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 139    ggccgcgtcctcaacgagcatccc 162
              |||||||||||||||| |||||||
Sbjct: 119611 ggccgcgtcctcaacgtgcatccc 119634



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>gb|AC006402.12| Drosophila melanogaster clone BACR08D17, complete sequence
          Length = 174735

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 139   ggccgcgtcctcaacgagcatccc 162
             |||||||||||||||| |||||||
Sbjct: 58321 ggccgcgtcctcaacgtgcatccc 58344



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>gb|AC183919.2| Pan troglodytes BAC clone CH251-691O9 from chromosome 7, complete
              sequence
          Length = 188947

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     tcccaacagagtcctccgtg 61
              ||||||||||||||||||||
Sbjct: 152793 tcccaacagagtcctccgtg 152812



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>ref|XM_329540.1| Neurospora crassa OR74A hypothetical protein (NCU08496.1) partial
           mRNA
          Length = 3873

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 251 ccgcgcccgcgaccgcggcggtga 274
           ||||||||||| ||||||||||||
Sbjct: 102 ccgcgcccgcgcccgcggcggtga 125



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>ref|XM_958332.1| Neurospora crassa OR74A hypothetical protein (NCU08496.1) partial
           mRNA
          Length = 3873

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 251 ccgcgcccgcgaccgcggcggtga 274
           ||||||||||| ||||||||||||
Sbjct: 102 ccgcgcccgcgcccgcggcggtga 125



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>gb|AY436785.1| Homo sapiens plasticity related gene 2a mRNA, complete cds;
           alternatively spliced
          Length = 2272

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 295 ggtgccgcgggcgccgcagg 314
           ||||||||||||||||||||
Sbjct: 63  ggtgccgcgggcgccgcagg 44



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>gb|AC004799.2| Homo sapiens chromosome 19, cosmid R33516, complete sequence
          Length = 36229

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  ggtgccgcgggcgccgcagg 314
            ||||||||||||||||||||
Sbjct: 2332 ggtgccgcgggcgccgcagg 2351



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>gb|AF541282.1| Homo sapiens plasticity related gene 2 mRNA, complete cds;
           alternatively spliced
          Length = 2357

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 295 ggtgccgcgggcgccgcagg 314
           ||||||||||||||||||||
Sbjct: 64  ggtgccgcgggcgccgcagg 45



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>gb|AY304517.1| Homo sapiens lipid phosphate phosphatase-related protein type 3
           mRNA, complete cds
          Length = 2357

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 295 ggtgccgcgggcgccgcagg 314
           ||||||||||||||||||||
Sbjct: 64  ggtgccgcgggcgccgcagg 45



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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 287     ccgcatccggtgccgcgggcgccgcagg 314
               |||||||||||||||||| | |||||||
Sbjct: 2698385 ccgcatccggtgccgcggcccccgcagg 2698358



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>emb|BX842594.1| Neurospora crassa DNA linkage group II BAC clone B18P7
          Length = 95637

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 251   ccgcgcccgcgaccgcggcggtga 274
             ||||||||||| ||||||||||||
Sbjct: 11098 ccgcgcccgcgcccgcggcggtga 11121



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>emb|AL583919.1|MLEPRTN3 Mycobacterium leprae strain TN complete genome; segment 3/10
          Length = 312050

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 127    tgcgcattcgccggccgcgt 146
              ||||||||||||||||||||
Sbjct: 147263 tgcgcattcgccggccgcgt 147282



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>emb|AL356834.1|NCB11B22 Neurospora crassa DNA linkage group II BAC clone B11B22
          Length = 73803

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 251   ccgcgcccgcgaccgcggcggtga 274
             ||||||||||| ||||||||||||
Sbjct: 32942 ccgcgcccgcgcccgcggcggtga 32919



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>emb|AL136596.1|HSM801570 Homo sapiens mRNA; cDNA DKFZp761F069 (from clone DKFZp761F069)
          Length = 2357

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 295 ggtgccgcgggcgccgcagg 314
           ||||||||||||||||||||
Sbjct: 64  ggtgccgcgggcgccgcagg 45



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>ref|NM_024888.1| Homo sapiens plasticity-related gene 2 (PRG2), mRNA
          Length = 2357

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 295 ggtgccgcgggcgccgcagg 314
           ||||||||||||||||||||
Sbjct: 64  ggtgccgcgggcgccgcagg 45



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 396     gttcttcatgcacgacatcctcgg 419
               |||||||||||| |||||||||||
Sbjct: 2965665 gttcttcatgcatgacatcctcgg 2965688



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>gb|AF357888.1| Homo sapiens PAP-2-like protein 2 (PHP2) mRNA, complete cds
          Length = 2703

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 295 ggtgccgcgggcgccgcagg 314
           ||||||||||||||||||||
Sbjct: 408 ggtgccgcgggcgccgcagg 389



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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 284     catccgcatccggtgccgcg 303
               ||||||||||||||||||||
Sbjct: 5112931 catccgcatccggtgccgcg 5112950



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    cgccggcgacagcccgctga 394
              ||||||||||||||||||||
Sbjct: 248426 cgccggcgacagcccgctga 248445



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>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0011G08
          Length = 139490

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 396   gttcttcatgcacgacatcctcgg 419
             |||||||||||| |||||||||||
Sbjct: 47182 gttcttcatgcatgacatcctcgg 47205



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>gb|AF077869.2|AF077869 Streptomyces argillaceus glycosyltransferase (mtmGIV),
            glycosyltransferase (mtmGIII), c-methyltransferase
            (mtmMII), o-methyltransferase (mtmMI),
            glycosyltransferase (mtmGII), glycosyltransferase
            (mtmGI), and oxygenase (mtmOIV) genes, complete cds; and
            MtrX (mtrX) gene, partial cds
          Length = 9316

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 254  cgcccgcgaccgcggcggtgatgc 277
            ||||||||||||||||||| ||||
Sbjct: 1014 cgcccgcgaccgcggcggtcatgc 991



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>gb|AE003666.6| Drosophila melanogaster chromosome 2L, section 75 of 83 of the complete
              sequence
          Length = 318277

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 139    ggccgcgtcctcaacgagcatccc 162
              |||||||||||||||| |||||||
Sbjct: 265338 ggccgcgtcctcaacgtgcatccc 265361



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>emb|CR626857.1| Rice Cluster I (RC-I), uncultured archeon clone 3D10 complete sequence
          Length = 36858

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   cggtgatgcctttgccatcc 288
             ||||||||||||||||||||
Sbjct: 26770 cggtgatgcctttgccatcc 26751



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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 291    atccggtgccgcgggcgccg 310
              ||||||||||||||||||||
Sbjct: 789828 atccggtgccgcgggcgccg 789809



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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 294     cggtgccgcgggcgccgcag 313
               ||||||||||||||||||||
Sbjct: 2960715 cggtgccgcgggcgccgcag 2960696


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,519,493
Number of Sequences: 3902068
Number of extensions: 2519493
Number of successful extensions: 50656
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48405
Number of HSP's gapped (non-prelim): 2251
length of query: 467
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 445
effective length of database: 17,147,199,772
effective search space: 7630503898540
effective search space used: 7630503898540
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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