ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart07h06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009387.1| Triticum aestivum clone wlm96.pk035.d7:fis, full insert mRNA sequence Length = 1805 Score = 630 bits (318), Expect = e-178 Identities = 408/439 (92%) Strand = Plus / Plus Query: 22 caagctagctagcanagatggccatggctaggagctccagcctagtgctcgtcgccttcg 81 |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 14 caagctagctagcaaagatggccatggccaggagctccagcctagtgctcgtcgccttcg 73 Query: 82 ccctgctctgctgctacgcctcctccgtcgcctcccagggtaactcgtccgatgcattcc 141 || |||||||||||||||||||| ||||| ||||||||||||| ||||| |||| |||| Sbjct: 74 ccttgctctgctgctacgcctccaccgtctcctcccagggtaattcgtctgatggtttcc 133 Query: 142 tctcgtgcctgtcggcgagcatcccccgccagctcgtgttcacgccgagctcgccgtcgt 201 | ||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 134 tgtcgtgtctgacggcgagcatcccccgccagctcgtgttcacgccgagctcgccctcgt 193 Query: 202 tcacgccgctgctcaagtcctccatccggaaccccaagttcttcaccccgagcaccgtga 261 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 194 tcacgccgctgctcaagtcctccatccggaaccccaagttcttcacgcccagcaccgtga 253 Query: 262 ggccgctctacatcgtcacgcccacgaacgcgtcgcacgtgcaggccgccgtgctctgcg 321 ||||||| || ||| ||||||| |||||||| || |||||||||||||||||||| |||| Sbjct: 254 ggccgctgtatatcatcacgccgacgaacgcctcccacgtgcaggccgccgtgctgtgcg 313 Query: 322 gacgccggagcgggctgcgcatccncgtgcgcagcggcgggcacgactacnagggcctgt 381 | |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 314 gccgccggagcgggctgcgcatccgcgtgcgcagcggcgggcacgactacgagggcctgt 373 Query: 382 cgtaccggtccgtgcgggccgaggcgttcgcggtgctcgacctgtcgagcctccgctccg 441 |||||||||||||||| |||||| ||||||| ||||| ||||||||||||||||| ||| Sbjct: 374 cgtaccggtccgtgcgcgccgagtcgttcgccgtgcttgacctgtcgagcctccgtgccg 433 Query: 442 tgcgggtcgacgcgcaggc 460 ||||||||||||||||||| Sbjct: 434 tgcgggtcgacgcgcaggc 452
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 165 bits (83), Expect = 2e-37 Identities = 165/193 (85%) Strand = Plus / Minus Query: 253 gcaccgtgaggccgctctacatcgtcacgcccacgaacgcgtcgcacgtgcaggccgccg 312 |||||||| ||||||||| | |||| | |||||| |||||||||||||| |||||||||| Sbjct: 20461918 gcaccgtgcggccgctctgcgtcgtgaagcccaccaacgcgtcgcacgtccaggccgccg 20461859 Query: 313 tgctctgcggacgccggagcgggctgcgcatccncgtgcgcagcggcgggcacgactacn 372 |||| ||||| ||||| |||| ||||| ||| ||||||||||||||||||||||||| Sbjct: 20461858 tgctgtgcggccgccgccacggggtgcgcctccgcgtgcgcagcggcgggcacgactacg 20461799 Query: 373 agggcctgtcgtaccggtccgtgcgggccgaggcgttcgcggtgctcgacctgtcgagcc 432 ||||||| ||||||||||||||||| |||| |||||| ||| ||||||| | ||| Sbjct: 20461798 agggcctctcgtaccggtccgtgcgccaggaggtgttcgccgtggtcgacctcgccggcc 20461739 Query: 433 tccgctccgtgcg 445 ||||||||||||| Sbjct: 20461738 tccgctccgtgcg 20461726 Score = 147 bits (74), Expect = 4e-32 Identities = 227/278 (81%), Gaps = 3/278 (1%) Strand = Plus / Minus Query: 147 tgcctgtcggcgagcatcccccgccagctcgtgttcacgccgagctcgccgtcgttcacg 206 ||||| ||||||||||| ||| |||||||| ||| ||||| |||||||||||||| |||| Sbjct: 20486493 tgcctctcggcgagcatacccagccagctcctgtacacgcagagctcgccgtcgtacacg 20486434 Query: 207 ccgctgctcaagtcctccatccggaaccccaagttcttcaccccgagcaccgtgaggccg 266 || |||| | || |||||||||||| |||||| | || || |||| | ||||| Sbjct: 20486433 tcggtgctggacgccggcatccggaaccctaagttcctgac---gaacaccacgcggccg 20486377 Query: 267 ctctacatcgtcacgcccacgaacgcgtcgcacgtgcaggccgccgtgctctgcggacgc 326 ||| ||| ||||||| |||||||| || ||||| |||||||||||||||||||| ||| Sbjct: 20486376 gtctggatcatcacgccgacgaacgcctcccacgtccaggccgccgtgctctgcggccgc 20486317 Query: 327 cggagcgggctgcgcatccncgtgcgcagcggcgggcacgactacnagggcctgtcgtac 386 |||| ||| | ||| ||| | | ||||||||||||||||||||| ||||||| |||||| Sbjct: 20486316 cggaacggcgtccgcctccgcatccgcagcggcgggcacgactacgagggcctctcgtac 20486257 Query: 387 cggtccgtgcgggccgaggcgttcgcggtgctcgacct 424 |||| | |||| | ||| ||||||| ||||||||||| Sbjct: 20486256 aggtcggagcggccggagacgttcgccgtgctcgacct 20486219 Score = 131 bits (66), Expect = 2e-27 Identities = 150/176 (85%), Gaps = 2/176 (1%) Strand = Plus / Minus Query: 219 tcctccatccggaaccccaagttcttcaccccgagcaccgtgaggccgctctacatcgtc 278 ||||||||||||||||||| ||| |||| | ||| | ||||||||||| ||||||| Sbjct: 20438138 tcctccatccggaaccccatgtttttcaacaacgccacggcgaggccgctctgcatcgtc 20438079 Query: 279 acgcccacgaacgcgtcgcacgtgcaggccgccgtgctctgcggacgc-cggagcgggct 337 ||||| | ||||||||||||| |||||||||||||||||||| ||| | ||| ||| | Sbjct: 20438078 acgccggccgacgcgtcgcacgtccaggccgccgtgctctgcggccgcgccgag-ggggt 20438020 Query: 338 gcgcatccncgtgcgcagcggcgggcacgactacnagggcctgtcgtaccggtccg 393 |||| ||| || |||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 20438019 gcgcctccgcgcgcgcagcggcgggcacgactacgagggcctctcgtaccggtccg 20437964 Score = 77.8 bits (39), Expect = 3e-11 Identities = 49/53 (92%) Strand = Plus / Minus Query: 339 cgcatccncgtgcgcagcggcgggcacgactacnagggcctgtcgtaccggtc 391 ||||||| ||||||||||||||| ||||||||| ||||||| ||||||||||| Sbjct: 20421528 cgcatccgcgtgcgcagcggcggccacgactacgagggcctctcgtaccggtc 20421476 Score = 56.0 bits (28), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 350 gcgcagcggcgggcacgactacnagggcctgtcgtaccg 388 |||||||||||||||||||||| |||| || |||||||| Sbjct: 20465961 gcgcagcggcgggcacgactacgaggggctctcgtaccg 20465923 Score = 54.0 bits (27), Expect = 4e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 351 cgcagcggcgggcacgactacnagggcctgtcgtaccg 388 |||||||||||||| |||||| |||||||||| ||||| Sbjct: 20404768 cgcagcggcgggcatgactacgagggcctgtcctaccg 20404731 Score = 54.0 bits (27), Expect = 4e-04 Identities = 29/30 (96%) Strand = Plus / Minus Query: 350 gcgcagcggcgggcacgactacnagggcct 379 |||||||||||||||||||||| ||||||| Sbjct: 20389504 gcgcagcggcgggcacgactacgagggcct 20389475 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 289 acgcgtcgcacgtgcaggccgccgtgctctgcgg 322 |||| |||||||| ||||||||||||| |||||| Sbjct: 20404830 acgcctcgcacgtccaggccgccgtgcgctgcgg 20404797
>dbj|AP003686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0659D09 Length = 168253 Score = 165 bits (83), Expect = 2e-37 Identities = 165/193 (85%) Strand = Plus / Minus Query: 253 gcaccgtgaggccgctctacatcgtcacgcccacgaacgcgtcgcacgtgcaggccgccg 312 |||||||| ||||||||| | |||| | |||||| |||||||||||||| |||||||||| Sbjct: 34213 gcaccgtgcggccgctctgcgtcgtgaagcccaccaacgcgtcgcacgtccaggccgccg 34154 Query: 313 tgctctgcggacgccggagcgggctgcgcatccncgtgcgcagcggcgggcacgactacn 372 |||| ||||| ||||| |||| ||||| ||| ||||||||||||||||||||||||| Sbjct: 34153 tgctgtgcggccgccgccacggggtgcgcctccgcgtgcgcagcggcgggcacgactacg 34094 Query: 373 agggcctgtcgtaccggtccgtgcgggccgaggcgttcgcggtgctcgacctgtcgagcc 432 ||||||| ||||||||||||||||| |||| |||||| ||| ||||||| | ||| Sbjct: 34093 agggcctctcgtaccggtccgtgcgccaggaggtgttcgccgtggtcgacctcgccggcc 34034 Query: 433 tccgctccgtgcg 445 ||||||||||||| Sbjct: 34033 tccgctccgtgcg 34021 Score = 147 bits (74), Expect = 4e-32 Identities = 227/278 (81%), Gaps = 3/278 (1%) Strand = Plus / Minus Query: 147 tgcctgtcggcgagcatcccccgccagctcgtgttcacgccgagctcgccgtcgttcacg 206 ||||| ||||||||||| ||| |||||||| ||| ||||| |||||||||||||| |||| Sbjct: 58788 tgcctctcggcgagcatacccagccagctcctgtacacgcagagctcgccgtcgtacacg 58729 Query: 207 ccgctgctcaagtcctccatccggaaccccaagttcttcaccccgagcaccgtgaggccg 266 || |||| | || |||||||||||| |||||| | || || |||| | ||||| Sbjct: 58728 tcggtgctggacgccggcatccggaaccctaagttcctgac---gaacaccacgcggccg 58672 Query: 267 ctctacatcgtcacgcccacgaacgcgtcgcacgtgcaggccgccgtgctctgcggacgc 326 ||| ||| ||||||| |||||||| || ||||| |||||||||||||||||||| ||| Sbjct: 58671 gtctggatcatcacgccgacgaacgcctcccacgtccaggccgccgtgctctgcggccgc 58612 Query: 327 cggagcgggctgcgcatccncgtgcgcagcggcgggcacgactacnagggcctgtcgtac 386 |||| ||| | ||| ||| | | ||||||||||||||||||||| ||||||| |||||| Sbjct: 58611 cggaacggcgtccgcctccgcatccgcagcggcgggcacgactacgagggcctctcgtac 58552 Query: 387 cggtccgtgcgggccgaggcgttcgcggtgctcgacct 424 |||| | |||| | ||| ||||||| ||||||||||| Sbjct: 58551 aggtcggagcggccggagacgttcgccgtgctcgacct 58514 Score = 131 bits (66), Expect = 2e-27 Identities = 150/176 (85%), Gaps = 2/176 (1%) Strand = Plus / Minus Query: 219 tcctccatccggaaccccaagttcttcaccccgagcaccgtgaggccgctctacatcgtc 278 ||||||||||||||||||| ||| |||| | ||| | ||||||||||| ||||||| Sbjct: 10433 tcctccatccggaaccccatgtttttcaacaacgccacggcgaggccgctctgcatcgtc 10374 Query: 279 acgcccacgaacgcgtcgcacgtgcaggccgccgtgctctgcggacgc-cggagcgggct 337 ||||| | ||||||||||||| |||||||||||||||||||| ||| | ||| ||| | Sbjct: 10373 acgccggccgacgcgtcgcacgtccaggccgccgtgctctgcggccgcgccgag-ggggt 10315 Query: 338 gcgcatccncgtgcgcagcggcgggcacgactacnagggcctgtcgtaccggtccg 393 |||| ||| || |||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 10314 gcgcctccgcgcgcgcagcggcgggcacgactacgagggcctctcgtaccggtccg 10259 Score = 56.0 bits (28), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 350 gcgcagcggcgggcacgactacnagggcctgtcgtaccg 388 |||||||||||||||||||||| |||| || |||||||| Sbjct: 38256 gcgcagcggcgggcacgactacgaggggctctcgtaccg 38218
>dbj|AK073505.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046H14, full insert sequence Length = 1813 Score = 165 bits (83), Expect = 2e-37 Identities = 165/193 (85%) Strand = Plus / Plus Query: 253 gcaccgtgaggccgctctacatcgtcacgcccacgaacgcgtcgcacgtgcaggccgccg 312 |||||||| ||||||||| | |||| | |||||| |||||||||||||| |||||||||| Sbjct: 269 gcaccgtgcggccgctctgcgtcgtgaagcccaccaacgcgtcgcacgtccaggccgccg 328 Query: 313 tgctctgcggacgccggagcgggctgcgcatccncgtgcgcagcggcgggcacgactacn 372 |||| ||||| ||||| |||| ||||| ||| ||||||||||||||||||||||||| Sbjct: 329 tgctgtgcggccgccgccacggggtgcgcctccgcgtgcgcagcggcgggcacgactacg 388 Query: 373 agggcctgtcgtaccggtccgtgcgggccgaggcgttcgcggtgctcgacctgtcgagcc 432 ||||||| ||||||||||||||||| |||| |||||| ||| ||||||| | ||| Sbjct: 389 agggcctctcgtaccggtccgtgcgccaggaggtgttcgccgtggtcgacctcgccggcc 448 Query: 433 tccgctccgtgcg 445 ||||||||||||| Sbjct: 449 tccgctccgtgcg 461
>dbj|AK109673.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-B05, full insert sequence Length = 1972 Score = 147 bits (74), Expect = 4e-32 Identities = 227/278 (81%), Gaps = 3/278 (1%) Strand = Plus / Plus Query: 147 tgcctgtcggcgagcatcccccgccagctcgtgttcacgccgagctcgccgtcgttcacg 206 ||||| ||||||||||| ||| |||||||| ||| ||||| |||||||||||||| |||| Sbjct: 179 tgcctctcggcgagcatacccagccagctcctgtacacgcagagctcgccgtcgtacacg 238 Query: 207 ccgctgctcaagtcctccatccggaaccccaagttcttcaccccgagcaccgtgaggccg 266 || |||| | || |||||||||||| |||||| | || || |||| | ||||| Sbjct: 239 tcggtgctggacgccggcatccggaaccctaagttcctgac---gaacaccacgcggccg 295 Query: 267 ctctacatcgtcacgcccacgaacgcgtcgcacgtgcaggccgccgtgctctgcggacgc 326 ||| ||| ||||||| |||||||| || ||||| |||||||||||||||||||| ||| Sbjct: 296 gtctggatcatcacgccgacgaacgcctcccacgtccaggccgccgtgctctgcggccgc 355 Query: 327 cggagcgggctgcgcatccncgtgcgcagcggcgggcacgactacnagggcctgtcgtac 386 |||| ||| | ||| ||| | | ||||||||||||||||||||| ||||||| |||||| Sbjct: 356 cggaacggcgtccgcctccgcatccgcagcggcgggcacgactacgagggcctctcgtac 415 Query: 387 cggtccgtgcgggccgaggcgttcgcggtgctcgacct 424 |||| | |||| | ||| ||||||| ||||||||||| Sbjct: 416 aggtcggagcggccggagacgttcgccgtgctcgacct 453
>gb|AC133608.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0085G12, complete sequence Length = 121470 Score = 131 bits (66), Expect = 2e-27 Identities = 118/136 (86%) Strand = Plus / Minus Query: 289 acgcgtcgcacgtgcaggccgccgtgctctgcggacgccggagcgggctgcgcatccncg 348 ||||||| ||||| ||||||||||||| ||||| | ||||||||| | ||| ||| || Sbjct: 74481 acgcgtcccacgtccaggccgccgtgcggtgcggccaccggagcggcgtccgcctccgcg 74422 Query: 349 tgcgcagcggcgggcacgactacnagggcctgtcgtaccggtccgtgcgggccgaggcgt 408 ||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||| ||| Sbjct: 74421 tgcgcagcggcgggcacgactacgagggcctctcgtaccgcgccgtgcgcgccgagacgt 74362 Query: 409 tcgcggtgctcgacct 424 |||| ||||||||||| Sbjct: 74361 tcgccgtgctcgacct 74346
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 131 bits (66), Expect = 2e-27 Identities = 118/136 (86%) Strand = Plus / Minus Query: 289 acgcgtcgcacgtgcaggccgccgtgctctgcggacgccggagcgggctgcgcatccncg 348 ||||||| ||||| ||||||||||||| ||||| | ||||||||| | ||| ||| || Sbjct: 17006874 acgcgtcccacgtccaggccgccgtgcggtgcggccaccggagcggcgtccgcctccgcg 17006815 Query: 349 tgcgcagcggcgggcacgactacnagggcctgtcgtaccggtccgtgcgggccgaggcgt 408 ||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||| ||| Sbjct: 17006814 tgcgcagcggcgggcacgactacgagggcctctcgtaccgcgccgtgcgcgccgagacgt 17006755 Query: 409 tcgcggtgctcgacct 424 |||| ||||||||||| Sbjct: 17006754 tcgccgtgctcgacct 17006739
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 131 bits (66), Expect = 2e-27 Identities = 118/136 (86%) Strand = Plus / Minus Query: 289 acgcgtcgcacgtgcaggccgccgtgctctgcggacgccggagcgggctgcgcatccncg 348 ||||||| ||||| ||||||||||||| ||||| | ||||||||| | ||| ||| || Sbjct: 17101526 acgcgtcccacgtccaggccgccgtgcggtgcggccaccggagcggcgtccgcctccgcg 17101467 Query: 349 tgcgcagcggcgggcacgactacnagggcctgtcgtaccggtccgtgcgggccgaggcgt 408 ||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||| ||| Sbjct: 17101466 tgcgcagcggcgggcacgactacgagggcctctcgtaccgcgccgtgcgcgccgagacgt 17101407 Query: 409 tcgcggtgctcgacct 424 |||| ||||||||||| Sbjct: 17101406 tcgccgtgctcgacct 17101391
>emb|AJ512487.2|PPR512487 Phleum pratense partial phlp4 gene for pollen allergen Phl p 4, allele A1 Length = 1567 Score = 123 bits (62), Expect = 5e-25 Identities = 132/156 (84%) Strand = Plus / Plus Query: 257 cgtgaggccgctctacatcgtcacgcccacgaacgcgtcgcacgtgcaggccgccgtgct 316 ||||| |||| ||||||||||||| ||||| ||||| || ||| | ||| |||||||| | Sbjct: 174 cgtgaagccgatctacatcgtcacccccaccaacgcctcccacatccagtccgccgtggt 233 Query: 317 ctgcggacgccggagcgggctgcgcatccncgtgcgcagcggcgggcacgactacnaggg 376 ||||| |||||| ||| | ||||||| ||||||||||||||||||||||||| |||| Sbjct: 234 gtgcggccgccggcacggtgtccgcatccgcgtgcgcagcggcgggcacgactacgaggg 293 Query: 377 cctgtcgtaccggtccgtgcgggccgaggcgttcgc 412 ||| |||||||||||| ||| | |||||| |||||| Sbjct: 294 cctctcgtaccggtccctgcagcccgaggagttcgc 329
>emb|AJ862831.1| Secale cereale partial secc4 gene for pollen allergen Sec c 4, allele B Length = 1644 Score = 115 bits (58), Expect = 1e-22 Identities = 131/156 (83%) Strand = Plus / Plus Query: 257 cgtgaggccgctctacatcgtcacgcccacgaacgcgtcgcacgtgcaggccgccgtgct 316 ||||| ||||||||||||| |||| ||||| ||||| || ||| | ||| |||| ||| | Sbjct: 219 cgtgaagccgctctacatcatcacccccaccaacgcctcccacatccagtccgcggtggt 278 Query: 317 ctgcggacgccggagcgggctgcgcatccncgtgcgcagcggcgggcacgactacnaggg 376 ||||| |||||| ||| | ||||||| |||||| |||||||| ||||||||| |||| Sbjct: 279 gtgcggccgccggcacggcgtccgcatccgcgtgcggagcggcggccacgactacgaggg 338 Query: 377 cctgtcgtaccggtccgtgcgggccgaggcgttcgc 412 ||||||||||||||||| ||| ||||||||||||| Sbjct: 339 cctgtcgtaccggtccgagcgccccgaggcgttcgc 374
>gb|AY451241.1| Cynodon dactylon FAD-linked oxidoreductase BG60 mRNA, complete cds Length = 1569 Score = 107 bits (54), Expect = 3e-20 Identities = 115/136 (84%) Strand = Plus / Plus Query: 258 gtgaggccgctctacatcgtcacgcccacgaacgcgtcgcacgtgcaggccgccgtgctc 317 |||| |||||| |||||| |||| || || ||||| || ||| | |||||||||||| | Sbjct: 232 gtgaagccgctgtacatcatcaccccgaccaacgcctcccacatccaggccgccgtggtg 291 Query: 318 tgcggacgccggagcgggctgcgcatccncgtgcgcagcggcgggcacgactacnagggc 377 ||||| |||||| ||| ||||||||| ||||||||| ||||||||||||||| |||| Sbjct: 292 tgcggccgccggcacggcatgcgcatccgcgtgcgcagtggcgggcacgactacgagggg 351 Query: 378 ctgtcgtaccggtccg 393 |||||||||||||||| Sbjct: 352 ctgtcgtaccggtccg 367
>emb|AJ862832.1| Triticum aestivum partial tria4 gene for pollen allergen Tri a 4, allele A Length = 1603 Score = 93.7 bits (47), Expect = 5e-16 Identities = 114/137 (83%) Strand = Plus / Plus Query: 257 cgtgaggccgctctacatcgtcacgcccacgaacgcgtcgcacgtgcaggccgccgtgct 316 ||||| ||||||||||||| |||| ||||| ||||| |||||| | ||| |||| ||| | Sbjct: 210 cgtgaagccgctctacatcatcacccccaccaacgcctcgcacatccagtccgcggtggt 269 Query: 317 ctgcggacgccggagcgggctgcgcatccncgtgcgcagcggcgggcacgactacnaggg 376 |||||||||||| | | | ||| ||| ||| || |||||||| ||||||||| |||| Sbjct: 270 gtgcggacgccggcacagcgtccgcctccgcgtccggagcggcggccacgactacgaggg 329 Query: 377 cctgtcgtaccggtccg 393 ||||||||||||||||| Sbjct: 330 cctgtcgtaccggtccg 346
>emb|AJ512488.2|PPR512488 Phleum pratense partial phlp4 gene for pollen allergen Phl p 4, allele B1 Length = 1580 Score = 91.7 bits (46), Expect = 2e-15 Identities = 128/156 (82%) Strand = Plus / Plus Query: 257 cgtgaggccgctctacatcgtcacgcccacgaacgcgtcgcacgtgcaggccgccgtgct 316 ||||| ||||||||||||| |||| ||||| |||| || ||| | ||| |||||||| | Sbjct: 174 cgtgaagccgctctacatcatcacccccaccaacgtctcccacatccagtccgccgtggt 233 Query: 317 ctgcggacgccggagcgggctgcgcatccncgtgcgcagcggcgggcacgactacnaggg 376 ||||| ||||| | | | ||||||| ||||||||||||||||||||||||| |||| Sbjct: 234 gtgcggccgccgccacagcgtccgcatccgcgtgcgcagcggcgggcacgactacgaggg 293 Query: 377 cctgtcgtaccggtccgtgcgggccgaggcgttcgc 412 ||| ||||||||||| ||| | ||||| ||||||| Sbjct: 294 cctctcgtaccggtctttgcagcccgagacgttcgc 329
>emb|AJ862834.1| Hordeum vulgare partial horv4 gene for pollen allergen Hor v 4 Length = 1608 Score = 91.7 bits (46), Expect = 2e-15 Identities = 128/156 (82%) Strand = Plus / Plus Query: 257 cgtgaggccgctctacatcgtcacgcccacgaacgcgtcgcacgtgcaggccgccgtgct 316 ||||| ||||||||||||| |||| ||||| ||| | || ||| | ||| | || ||| | Sbjct: 213 cgtgaagccgctctacatcatcacccccaccaacacctcccacatccagtctgctgtggt 272 Query: 317 ctgcggacgccggagcgggctgcgcatccncgtgcgcagcggcgggcacgactacnaggg 376 ||||| |||||| ||| | ||| ||| |||||| |||||||| ||||||||| |||| Sbjct: 273 gtgcggccgccggcacggcgtccgcctccgcgtgcggagcggcggccacgactacgaggg 332 Query: 377 cctgtcgtaccggtccgtgcgggccgaggcgttcgc 412 ||||||||||||||||| ||| ||||||||||||| Sbjct: 333 cctgtcgtaccggtccgagcgccccgaggcgttcgc 368
>gb|DQ251188.1| Phleum pratense major pollen allergen Phl p 4 precursor, mRNA, complete cds Length = 1741 Score = 91.7 bits (46), Expect = 2e-15 Identities = 128/156 (82%) Strand = Plus / Plus Query: 257 cgtgaggccgctctacatcgtcacgcccacgaacgcgtcgcacgtgcaggccgccgtgct 316 ||||| ||||||||||||| |||| ||||| |||| || ||| | ||| |||||||| | Sbjct: 260 cgtgaagccgctctacatcatcacccccaccaacgtctcccacatccagtccgccgtggt 319 Query: 317 ctgcggacgccggagcgggctgcgcatccncgtgcgcagcggcgggcacgactacnaggg 376 ||||| ||||| | | | ||||||| ||||||||||||||||||||||||| |||| Sbjct: 320 gtgcggccgccgccacagcgtccgcatccgcgtgcgcagcggcgggcacgactacgaggg 379 Query: 377 cctgtcgtaccggtccgtgcgggccgaggcgttcgc 412 ||| ||||||||||| ||| | ||||| ||||||| Sbjct: 380 cctctcgtaccggtctttgcagcccgagacgttcgc 415
>emb|AJ862830.1| Secale cereale partial secc4 gene for pollen allergen Sec c 4, allele A Length = 1603 Score = 89.7 bits (45), Expect = 7e-15 Identities = 112/135 (82%) Strand = Plus / Plus Query: 257 cgtgaggccgctctacatcgtcacgcccacgaacgcgtcgcacgtgcaggccgccgtgct 316 ||||| |||| |||||||| |||| ||||| ||||| |||||| | ||| |||| ||| | Sbjct: 213 cgtgaagccgatctacatcatcacccccaccaacgcctcgcacatccagtccgcggtggt 272 Query: 317 ctgcggacgccggagcgggctgcgcatccncgtgcgcagcggcgggcacgactacnaggg 376 ||||| |||||| ||| | ||| ||| |||||| |||||||| ||||||||| |||| Sbjct: 273 gtgcggccgccggcacggcatccgcctccgcgtgcggagcggcggccacgactacgaggg 332 Query: 377 cctgtcgtaccggtc 391 ||||||||||||||| Sbjct: 333 cctgtcgtaccggtc 347
>emb|AJ862833.1| Triticum aestivum partial tria4 gene for pollen allergen Tri a 4, allele B Length = 1603 Score = 77.8 bits (39), Expect = 3e-11 Identities = 112/137 (81%) Strand = Plus / Plus Query: 257 cgtgaggccgctctacatcgtcacgcccacgaacgcgtcgcacgtgcaggccgccgtgct 316 ||||| |||||| |||||| |||| ||||| ||||| || ||| | || |||| ||| | Sbjct: 210 cgtgaagccgctgtacatcatcacccccaccaacgcctcccacatccaatccgcggtggt 269 Query: 317 ctgcggacgccggagcgggctgcgcatccncgtgcgcagcggcgggcacgactacnaggg 376 ||||| |||||| ||| | ||| ||| |||||| |||||||| ||||||||| |||| Sbjct: 270 gtgcggccgccggcacggcgtccgcctccgcgtgcggagcggcggccacgactacgaggg 329 Query: 377 cctgtcgtaccggtccg 393 ||||||||||||||||| Sbjct: 330 cctgtcgtaccggtccg 346
>dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016D02 Length = 157822 Score = 77.8 bits (39), Expect = 3e-11 Identities = 49/53 (92%) Strand = Plus / Minus Query: 339 cgcatccncgtgcgcagcggcgggcacgactacnagggcctgtcgtaccggtc 391 ||||||| ||||||||||||||| ||||||||| ||||||| ||||||||||| Sbjct: 144923 cgcatccgcgtgcgcagcggcggccacgactacgagggcctctcgtaccggtc 144871 Score = 54.0 bits (27), Expect = 4e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 351 cgcagcggcgggcacgactacnagggcctgtcgtaccg 388 |||||||||||||| |||||| |||||||||| ||||| Sbjct: 128163 cgcagcggcgggcatgactacgagggcctgtcctaccg 128126 Score = 54.0 bits (27), Expect = 4e-04 Identities = 29/30 (96%) Strand = Plus / Minus Query: 350 gcgcagcggcgggcacgactacnagggcct 379 |||||||||||||||||||||| ||||||| Sbjct: 112899 gcgcagcggcgggcacgactacgagggcct 112870 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 289 acgcgtcgcacgtgcaggccgccgtgctctgcgg 322 |||| |||||||| ||||||||||||| |||||| Sbjct: 128225 acgcctcgcacgtccaggccgccgtgcgctgcgg 128192
>dbj|AK072611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133A01, full insert sequence Length = 2030 Score = 77.8 bits (39), Expect = 3e-11 Identities = 49/53 (92%) Strand = Plus / Plus Query: 339 cgcatccncgtgcgcagcggcgggcacgactacnagggcctgtcgtaccggtc 391 ||||||| ||||||||||||||| ||||||||| ||||||| ||||||||||| Sbjct: 338 cgcatccgcgtgcgcagcggcggccacgactacgagggcctctcgtaccggtc 390
>emb|AJ862835.1| Lolium perenne partial lolp4 gene for pollen allergen Lol p 4 Length = 1272 Score = 71.9 bits (36), Expect = 2e-09 Identities = 46/50 (92%) Strand = Plus / Plus Query: 339 cgcatccncgtgcgcagcggcgggcacgactacnagggcctgtcgtaccg 388 ||||||| ||| ||||||||||||||||||||| ||||||| |||||||| Sbjct: 32 cgcatccgcgtacgcagcggcgggcacgactacgagggcctctcgtaccg 81
>gb|AC144736.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0008E07, complete sequence Length = 146679 Score = 63.9 bits (32), Expect = 4e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 350 gcgcagcggcgggcacgactacnagggcctgtcgtaccg 388 |||||||||||||||||||||| ||||||| |||||||| Sbjct: 106113 gcgcagcggcgggcacgactacgagggcctctcgtaccg 106151
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 63.9 bits (32), Expect = 4e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 350 gcgcagcggcgggcacgactacnagggcctgtcgtaccg 388 |||||||||||||||||||||| ||||||| |||||||| Sbjct: 12338635 gcgcagcggcgggcacgactacgagggcctctcgtaccg 12338673 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 gctgctacgcctcctccgtcg 111 ||||||||||||||||||||| Sbjct: 15988936 gctgctacgcctcctccgtcg 15988956 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 414 gtgctcgacctgtcgagcctccgct 438 ||||||||||||||||| ||||||| Sbjct: 15808441 gtgctcgacctgtcgaggctccgct 15808465
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 63.9 bits (32), Expect = 4e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 350 gcgcagcggcgggcacgactacnagggcctgtcgtaccg 388 |||||||||||||||||||||| ||||||| |||||||| Sbjct: 7689756 gcgcagcggcgggcacgactacgagggcctctcgtaccg 7689794
>dbj|AP003991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_A12 Length = 149089 Score = 63.9 bits (32), Expect = 4e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 350 gcgcagcggcgggcacgactacnagggcctgtcgtaccg 388 |||||||||||||||||||||| ||||||| |||||||| Sbjct: 26021 gcgcagcggcgggcacgactacgagggcctctcgtaccg 26059
>ref|XM_481787.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1650 Score = 60.0 bits (30), Expect = 7e-06 Identities = 46/52 (88%) Strand = Plus / Plus Query: 335 gctgcgcatccncgtgcgcagcggcgggcacgactacnagggcctgtcgtac 386 ||||||||||| |||||||||||||| |||| |||| ||||||| |||||| Sbjct: 294 gctgcgcatccgcgtgcgcagcggcgcgcacagctacgagggcctctcgtac 345
>ref|NM_192799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3201 Score = 60.0 bits (30), Expect = 7e-06 Identities = 35/37 (94%) Strand = Plus / Minus Query: 350 gcgcagcggcgggcacgactacnagggcctgtcgtac 386 |||||||||||||||||||||| ||||||| |||||| Sbjct: 2455 gcgcagcggcgggcacgactacgagggcctctcgtac 2419
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 60.0 bits (30), Expect = 7e-06 Identities = 46/52 (88%) Strand = Plus / Minus Query: 335 gctgcgcatccncgtgcgcagcggcgggcacgactacnagggcctgtcgtac 386 ||||||||||| |||||||||||||| |||| |||| ||||||| |||||| Sbjct: 15504540 gctgcgcatccgcgtgcgcagcggcgcgcacagctacgagggcctctcgtac 15504489
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 60.0 bits (30), Expect = 7e-06 Identities = 35/37 (94%) Strand = Plus / Plus Query: 350 gcgcagcggcgggcacgactacnagggcctgtcgtac 386 |||||||||||||||||||||| ||||||| |||||| Sbjct: 24483708 gcgcagcggcgggcacgactacgagggcctctcgtac 24483744 Score = 56.0 bits (28), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 350 gcgcagcggcgggcacgactacnagggcctgtcgtaccg 388 |||||||||||||||| ||||| ||||||| |||||||| Sbjct: 10209761 gcgcagcggcgggcacaactacgagggcctctcgtaccg 10209723
>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0686E09 Length = 156425 Score = 60.0 bits (30), Expect = 7e-06 Identities = 35/37 (94%) Strand = Plus / Plus Query: 350 gcgcagcggcgggcacgactacnagggcctgtcgtac 386 |||||||||||||||||||||| ||||||| |||||| Sbjct: 64092 gcgcagcggcgggcacgactacgagggcctctcgtac 64128
>dbj|AP004645.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_B10 Length = 148508 Score = 60.0 bits (30), Expect = 7e-06 Identities = 46/52 (88%) Strand = Plus / Minus Query: 335 gctgcgcatccncgtgcgcagcggcgggcacgactacnagggcctgtcgtac 386 ||||||||||| |||||||||||||| |||| |||| ||||||| |||||| Sbjct: 52298 gctgcgcatccgcgtgcgcagcggcgcgcacagctacgagggcctctcgtac 52247
>ref|XM_462837.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 975 Score = 56.0 bits (28), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 350 gcgcagcggcgggcacgactacnagggcctgtcgtaccg 388 |||||||||||||||| ||||| ||||||| |||||||| Sbjct: 681 gcgcagcggcgggcacaactacgagggcctctcgtaccg 719
>dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498A12 Length = 159749 Score = 56.0 bits (28), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 350 gcgcagcggcgggcacgactacnagggcctgtcgtaccg 388 |||||||||||||||| ||||| ||||||| |||||||| Sbjct: 75075 gcgcagcggcgggcacaactacgagggcctctcgtaccg 75037
>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004B13 Length = 142268 Score = 56.0 bits (28), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 350 gcgcagcggcgggcacgactacnagggcctgtcgtaccg 388 |||||||||||||||| ||||| ||||||| |||||||| Sbjct: 134360 gcgcagcggcgggcacaactacgagggcctctcgtaccg 134322
>dbj|AK105176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-H12, full insert sequence Length = 1757 Score = 54.0 bits (27), Expect = 4e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 351 cgcagcggcgggcacgactacnagggcctgtcgtaccg 388 |||||||||||||| |||||| |||||||||| ||||| Sbjct: 368 cgcagcggcgggcatgactacgagggcctgtcctaccg 405 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 289 acgcgtcgcacgtgcaggccgccgtgctctgcgg 322 |||| |||||||| ||||||||||||| |||||| Sbjct: 306 acgcctcgcacgtccaggccgccgtgcgctgcgg 339
>ref|XM_317854.2| Anopheles gambiae str. PEST ENSANGP00000014393 (ENSANGG00000011904), partial mRNA Length = 2769 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 299 cgtgcaggccgccgtgctctgc 320 |||||||||||||||||||||| Sbjct: 2454 cgtgcaggccgccgtgctctgc 2475
>gb|AC135417.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1314_A05, complete sequence Length = 109853 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 gctgctacgcctcctccgtcg 111 ||||||||||||||||||||| Sbjct: 102601 gctgctacgcctcctccgtcg 102621
>gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015F11, complete sequence Length = 177574 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 gctgctacgcctcctccgtcg 111 ||||||||||||||||||||| Sbjct: 74687 gctgctacgcctcctccgtcg 74707
>gb|AC104706.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_F05, complete sequence Length = 119573 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 414 gtgctcgacctgtcgagcctccgct 438 ||||||||||||||||| ||||||| Sbjct: 80526 gtgctcgacctgtcgaggctccgct 80502
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ctcgtcgccttcgccctgctc 89 ||||||||||||||||||||| Sbjct: 2072906 ctcgtcgccttcgccctgctc 2072886
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 243 ttcaccccgagcaccgtgaggccgc 267 |||||||| |||||||||||||||| Sbjct: 2131716 ttcacccccagcaccgtgaggccgc 2131692
>gb|AC103624.9| Mus musculus chromosome 5, clone RP24-258B22, complete sequence Length = 172330 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 agatggccatggctaggagc 56 |||||||||||||||||||| Sbjct: 8795 agatggccatggctaggagc 8814
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 tcgtgttcacgccgagctcg 194 |||||||||||||||||||| Sbjct: 1416293 tcgtgttcacgccgagctcg 1416312
>ref|XM_363202.1| Magnaporthe grisea 70-15 hypothetical protein (MG08786.4) partial cds Length = 1656 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 cgtgcgcagcggcgggcacg 366 |||||||||||||||||||| Sbjct: 449 cgtgcgcagcggcgggcacg 468
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 cgtgcctgtcggcgagcatc 164 |||||||||||||||||||| Sbjct: 1441982 cgtgcctgtcggcgagcatc 1441963
>emb|BX012201.1|CNS08HKT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA19BF12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 846 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cgtcgccttcgccctgctct 90 |||||||||||||||||||| Sbjct: 732 cgtcgccttcgccctgctct 751
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 169 gccagctcgtgttcacgccgagctcgccgtcg 200 ||||| |||| ||||||||| ||||||||||| Sbjct: 1907664 gccagatcgtcttcacgccgggctcgccgtcg 1907633
>gb|DQ397869.1| Cenarchaeum symbiosum clone C04C05, complete sequence Length = 40287 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ctgtcggcgagcatcccccg 169 |||||||||||||||||||| Sbjct: 11225 ctgtcggcgagcatcccccg 11206
>gb|DQ397845.1| Cenarchaeum symbiosum clone C01B07, complete sequence Length = 41876 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ctgtcggcgagcatcccccg 169 |||||||||||||||||||| Sbjct: 29735 ctgtcggcgagcatcccccg 29754
>gb|AE012507.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 415 of 460 of the complete genome Length = 12726 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 ccggagcgggctgcgcatcc 345 |||||||||||||||||||| Sbjct: 2771 ccggagcgggctgcgcatcc 2752
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 gccgaggcgttcgcggtgctcgac 422 ||||||| |||||||||||||||| Sbjct: 1100090 gccgaggggttcgcggtgctcgac 1100067
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 ccggagcgggctgcgcatcc 345 |||||||||||||||||||| Sbjct: 4659743 ccggagcgggctgcgcatcc 4659724
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 cgtgcgggccgaggcgttcg 411 |||||||||||||||||||| Sbjct: 303068 cgtgcgggccgaggcgttcg 303087
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 gtccgtgcgggccgaggcgttcgc 412 ||||| |||||||||||||||||| Sbjct: 5524566 gtccgcgcgggccgaggcgttcgc 5524543
>ref|XM_311256.2| Anopheles gambiae str. PEST ENSANGP00000001582 (ENSANGG00000001337), partial mRNA Length = 1908 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cgtcgccttcgccctgctct 90 |||||||||||||||||||| Sbjct: 630 cgtcgccttcgccctgctct 649
>gb|AC104742.9| Mus musculus chromosome 5, clone RP24-334A12, complete sequence Length = 117378 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 agatggccatggctaggagc 56 |||||||||||||||||||| Sbjct: 2850 agatggccatggctaggagc 2831
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 182 cacgccgagctcgccgtcgttcacgccg 209 ||||||||| ||||||||||||||||| Sbjct: 1381277 cacgccgaggacgccgtcgttcacgccg 1381304
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 acgtgcaggccgccgtgctc 317 |||||||||||||||||||| Sbjct: 3164632 acgtgcaggccgccgtgctc 3164613
>emb|AL929082.7| Zebrafish DNA sequence from clone CH211-113P18, complete sequence Length = 195316 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ctgcagcgtacaacaagcta 28 |||||||||||||||||||| Sbjct: 145111 ctgcagcgtacaacaagcta 145092 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,172,089 Number of Sequences: 3902068 Number of extensions: 2172089 Number of successful extensions: 44660 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 60 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 43251 Number of HSP's gapped (non-prelim): 1403 length of query: 460 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 438 effective length of database: 17,147,199,772 effective search space: 7510473500136 effective search space used: 7510473500136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
