ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart07h03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CET1_YEAST (O13297) mRNA capping enzyme beta subunit (EC 3.1.3.3... 28 9.1

>CET1_YEAST (O13297) mRNA capping enzyme beta subunit (EC 3.1.3.33)|
           (Polynucleotide 5'-triphosphatase) (mRNA
           5'-triphosphatase) (TPase)
          Length = 549

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -2

Query: 300 PDDGHREA-GLGGHRPRPQLRQEANDEEDGGEDVHPG 193
           P D ++E+ G G H  +P+ R+ +ND+E+   D   G
Sbjct: 61  PIDNYKESTGHGSHSQKPKSRKSSNDDEETDTDDEMG 97


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,430,575
Number of Sequences: 219361
Number of extensions: 400009
Number of successful extensions: 1147
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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