ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart07h02 |
|---|---|
| Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 90.9 bits (224), Expect = 8e-19 Identities = 51/88 (57%), Positives = 59/88 (67%), Gaps = 2/88 (2%) Frame = +2 Query: 23 MALVRGRAASFLLLVTMRCSATFLAVPA-AATGKTGQVAVFWGRNKNEGSLREACDTGTY 199 MA + R + LL + +A FL A AA GKTGQV VFWGRNK EGSLREACD+G Y Sbjct: 1 MAPLAARRPACLLALLSVAAALFLTPTALAAGGKTGQVTVFWGRNKAEGSLREACDSGMY 60 Query: 200 TKALISFLDVXG-RGYNHLDLSGHDVXA 280 T +SFLDV G G HLDLSGHD+ + Sbjct: 61 TMVTMSFLDVFGANGKYHLDLSGHDLSS 88
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 87.4 bits (215), Expect = 8e-18 Identities = 43/79 (54%), Positives = 53/79 (67%) Frame = +2 Query: 38 GRAASFLLLVTMRCSATFLAVPAAATGKTGQVAVFWGRNKNEGSLREACDTGTYTKALIS 217 GR + + L + ++ LA PA A GKTGQ+ VFWGRNKNEG+L+E CDTG YT +IS Sbjct: 5 GRRSWLVPLAMVLAVSSCLAGPAMAAGKTGQMTVFWGRNKNEGTLKETCDTGLYTTVVIS 64 Query: 218 FLDVXGRGYNHLDLSGHDV 274 F V G G DLSGHD+ Sbjct: 65 FYSVFGHGRYWGDLSGHDL 83
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 74.7 bits (182), Expect = 6e-14 Identities = 42/88 (47%), Positives = 52/88 (59%) Frame = +2 Query: 17 LTMALVRGRAASFLLLVTMRCSATFLAVPAAATGKTGQVAVFWGRNKNEGSLREACDTGT 196 L AL+ AA+ LLL LA P AT +AV+WGR+K EGSLREACDTG Sbjct: 3 LVHALLPFAAAAALLL---------LAAPPPATADDPGLAVYWGRHKEEGSLREACDTGR 53 Query: 197 YTKALISFLDVXGRGYNHLDLSGHDVXA 280 YT +I+F + G G LD+SGH + A Sbjct: 54 YTTVIITFYNAFGHGRYSLDISGHPLAA 81
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 52.4 bits (124), Expect = 3e-07 Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 1/47 (2%) Frame = +2 Query: 131 VAVFWGRNKNEGSLREACDTGTYTKALISFLDVXGRGYN-HLDLSGH 268 +AV+WG+N NEGSL++AC+T Y I+FL G G N ++L+GH Sbjct: 26 IAVYWGQNGNEGSLQDACNTNNYQFVNIAFLSTFGNGQNPQINLAGH 72
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 51.6 bits (122), Expect = 5e-07 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 1/53 (1%) Frame = +2 Query: 113 TGKTGQVAVFWGRNKNEGSLREACDTGTYTKALISFLDVXGRGYN-HLDLSGH 268 T G +A++WG+N NEG+L + C+TG Y+ I+FL+ G G ++L+GH Sbjct: 22 TSYAGGIAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNKFGNGQTPEINLAGH 74
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 51.2 bits (121), Expect = 7e-07 Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%) Frame = +2 Query: 125 GQVAVFWGRNKNEGSLREACDTGTYTKALISFLDVXGRGYN-HLDLSGH 268 G ++V+WG+N NEGSL +AC+TG Y I+FL G G L+L+GH Sbjct: 30 GGISVYWGQNGNEGSLADACNTGNYKYVNIAFLFTFGGGQTPQLNLAGH 78
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 50.4 bits (119), Expect = 1e-06 Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 1/51 (1%) Frame = +2 Query: 119 KTGQVAVFWGRNKNEGSLREACDTGTYTKALISFLDVXGRGYNH-LDLSGH 268 + G + ++WG+N NEGSL + C T Y I+FL V G G N L+L+GH Sbjct: 21 EAGDIVIYWGQNGNEGSLADTCATNNYAIVNIAFLVVFGNGQNPVLNLAGH 71
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 48.1 bits (113), Expect = 6e-06 Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Frame = +2 Query: 65 VTMRCSATFLAVPAAATGKTGQVAVFWGRNKNEGSLREACDTGTYTKALISFLDVXGRGY 244 +T S FL + +A++WG+N NEGSL C TG Y I+FL G G Sbjct: 6 ITTTLSIFFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYEFVNIAFLSSFGSGQ 65 Query: 245 NH-LDLSGH 268 L+L+GH Sbjct: 66 APVLNLAGH 74
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 48.1 bits (113), Expect = 6e-06 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = +2 Query: 17 LTMALVRGRAASFLLLVTMRCSATFLAVPAAATGKTGQVAVFWGRNKNEGSLREACDTGT 196 +T +R FL ++ CS L+ P+ A+ G +A++WG+N NEG+L C TG Sbjct: 1 MTNMTLRKHVIYFLFFIS--CS---LSKPSDAS--RGGIAIYWGQNGNEGNLSATCATGR 53 Query: 197 YTKALISFLDVXGRGYN-HLDLSGH 268 Y ++FL G G L+L+GH Sbjct: 54 YAYVNVAFLVKFGNGQTPELNLAGH 78
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 47.8 bits (112), Expect = 7e-06 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%) Frame = +2 Query: 41 RAASFLLLVTMRCSATFLAVPAAATGKTGQVAVFWGRNKNEGSLREACDTGTYTKALISF 220 + S L L+++ A+F + Q+ ++WG+N +EGSL + C++G Y +++F Sbjct: 4 KIVSVLFLISLLIFASF------ESSHGSQIVIYWGQNGDEGSLADTCNSGNYGTVILAF 57 Query: 221 LDVXGRGYN-HLDLSGH 268 + G G L+L+GH Sbjct: 58 VATFGNGQTPALNLAGH 74
>CHLY_PARTH (P23473) Bifunctional chitinase/lysozyme [Includes: Chitinase (EC| 3.2.1.14); Lysozyme (EC 3.2.1.17)] (Fragment) Length = 47 Score = 47.0 bits (110), Expect = 1e-05 Identities = 18/39 (46%), Positives = 28/39 (71%) Frame = +2 Query: 125 GQVAVFWGRNKNEGSLREACDTGTYTKALISFLDVXGRG 241 G +A++WG+N NEG+L + C+TG Y+ I+FL+ G G Sbjct: 1 GGIAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNKFGNG 39
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 47.0 bits (110), Expect = 1e-05 Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%) Frame = +2 Query: 125 GQVAVFWGRNKNEGSLREACDTGTYTKALISFLDVXGRGYN-HLDLSGH 268 G +A++WG+N NEG+L + C T Y+ I+FL+ G G ++L+GH Sbjct: 27 GGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGH 75
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 40.8 bits (94), Expect = 0.001 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Frame = +2 Query: 119 KTGQVAVFWGRNKNEGSLREACDTGTYTKALISFLDVXGRGYN-HLDLSGH 268 K G + V+WG++ EG L + C++G Y I+FL G L+L+GH Sbjct: 23 KAGDIVVYWGQDVGEGKLIDTCNSGLYNIVNIAFLSSFGNFQTPKLNLAGH 73
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 37.7 bits (86), Expect = 0.008 Identities = 21/60 (35%), Positives = 33/60 (55%) Frame = +2 Query: 56 LLLVTMRCSATFLAVPAAATGKTGQVAVFWGRNKNEGSLREACDTGTYTKALISFLDVXG 235 L+L+ + +F + A T ++AV+WG+ + +G LR+ C T Y ISFLD G Sbjct: 8 LILMVVIWIMSFWTLSLADISST-EIAVYWGQ-REDGLLRDTCKTNNYKIVFISFLDKFG 65
>TILS_ERWCT (Q6D8C5) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 440 Score = 30.4 bits (67), Expect = 1.2 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 3/40 (7%) Frame = -1 Query: 186 SQASRRDPSFL---FLPQNTATWPVFPVAAAGTARKVAEQ 76 +Q R D +FL LP+ T WP FP A A +A AEQ Sbjct: 188 NQDERFDRNFLRRQILPRLTQRWPHFPSAVARSAELCAEQ 227
>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)| Length = 540 Score = 30.0 bits (66), Expect = 1.6 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 8/61 (13%) Frame = +2 Query: 83 ATFLA---VPAAATGKTGQVAVFWGRNKNEGSLREA-----CDTGTYTKALISFLDVXGR 238 + FLA V AA + V +WG+N GS +A C++G L+SFL V Sbjct: 12 SAFLASTGVQAAWSSNGPNVMYYWGQNSAGGSNTQASLGTYCESGQVDAVLLSFLHVFNV 71 Query: 239 G 241 G Sbjct: 72 G 72
>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 29.6 bits (65), Expect = 2.1 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 8/61 (13%) Frame = +2 Query: 83 ATFLA---VPAAATGKTGQVAVFWGRNKNEGSLREA-----CDTGTYTKALISFLDVXGR 238 + FLA V AA + V +WG+N GS +A C++G L+SFL V Sbjct: 12 SAFLASTGVQAAWSSHGPNVMYYWGQNSAGGSNTQASLGTYCESGQVDAVLLSFLHVFNV 71 Query: 239 G 241 G Sbjct: 72 G 72
>CHI1_RHINI (P29025) Chitinase 1 precursor (EC 3.2.1.14)| Length = 493 Score = 28.9 bits (63), Expect = 3.5 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 6/59 (10%) Frame = +2 Query: 83 ATFLAVPAAATGKTG-QVAVFWGRNK-----NEGSLREACDTGTYTKALISFLDVXGRG 241 A F+ AA G V +WG+N +GSL C +G ++SFL+ G Sbjct: 12 AAFITSTLAAYSSNGVNVMYYWGQNSAGGSNTQGSLVSYCQSGQVDVIILSFLNKFNMG 70
>LDH_DEIRA (P50933) L-lactate dehydrogenase (EC 1.1.1.27) (L-LDH)| Length = 304 Score = 28.5 bits (62), Expect = 4.6 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 8/45 (17%) Frame = -3 Query: 205 FGVRASVAGLAEGPL--------VLVPTPEHGHLARLPRGRGRDG 95 +G+ A++A + E L V PTPE+G LPR GR G Sbjct: 227 YGIGAALARITEAVLRDRRAVLTVSAPTPEYGVSLSLPRVVGRQG 271
>C1QT5_RAT (Q5FVH0) Complement C1q tumor necrosis factor-related protein 5| precursor Length = 243 Score = 28.5 bits (62), Expect = 4.6 Identities = 19/49 (38%), Positives = 23/49 (46%) Frame = -3 Query: 187 VAGLAEGPLVLVPTPEHGHLARLPRGRGRDGKEGCGAAHSHEE*EGGCP 41 + L G L TP H LP GRDG++G A E+ EGG P Sbjct: 24 IPSLCPGQPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPG-EKGEGGRP 71
>C1QT5_MOUSE (Q8K479) Complement C1q tumor necrosis factor-related protein 5| precursor Length = 243 Score = 28.5 bits (62), Expect = 4.6 Identities = 19/49 (38%), Positives = 23/49 (46%) Frame = -3 Query: 187 VAGLAEGPLVLVPTPEHGHLARLPRGRGRDGKEGCGAAHSHEE*EGGCP 41 + L G L TP H LP GRDG++G A E+ EGG P Sbjct: 24 IPSLCPGQPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPG-EKGEGGRP 71
>PPO_VICFA (Q06215) Polyphenol oxidase A1, chloroplast precursor (EC 1.10.3.1)| (PPO) (Catechol oxidase) Length = 606 Score = 28.5 bits (62), Expect = 4.6 Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 2/84 (2%) Frame = -1 Query: 249 WL*PRPXTSRKEMRALVYVPVSQAS-RRDPS-FLFLPQNTATWPVFPVAAAGTARKVAEQ 76 W +P R +++ LV V V+ + R+ P+ FL Q+ + FP+ + ++ Sbjct: 431 WEKAKPVPRRTKVQKLVEVEVNDGNLRKSPTIFLVRQQSPRKYVTFPLVLNNKVSAIVKR 490 Query: 75 RIVTRSRKEAARPRTSAIVRSMSF 4 RS+KE ++ + F Sbjct: 491 PKKLRSKKEKEEEEEVLVIEGIEF 514
>ACA8_ARATH (Q9LF79) Calcium-transporting ATPase 8, plasma membrane-type (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 8) Length = 1074 Score = 28.5 bits (62), Expect = 4.6 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 3/31 (9%) Frame = +2 Query: 89 FLAVPAAATGKTGQVAVFWGRNKN---EGSL 172 F+ VPAA +V FWG+ KN EGSL Sbjct: 1044 FIPVPAAPISNKLKVLKFWGKKKNSSGEGSL 1074
>C1QT5_HUMAN (Q9BXJ0) Complement C1q tumor necrosis factor-related protein 5| precursor Length = 243 Score = 28.1 bits (61), Expect = 6.0 Identities = 19/49 (38%), Positives = 23/49 (46%) Frame = -3 Query: 187 VAGLAEGPLVLVPTPEHGHLARLPRGRGRDGKEGCGAAHSHEE*EGGCP 41 + L G L TP H LP GRDG++G A E+ EGG P Sbjct: 24 IPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPGAPG-EKGEGGRP 71
>CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Soluble cell wall| protein 2) Length = 562 Score = 27.7 bits (60), Expect = 7.9 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%) Frame = +2 Query: 59 LLVTMRCSATFLAVPAAATGKTGQ--VAVFWGRNK--NEGSLREACDTGTYTKALISFLD 226 LL + FL +P A ++ +AV+WG+N + SL C++ L+SFL+ Sbjct: 3 LLYIILLFTQFLLLPTDAFDRSANTNIAVYWGQNSAGTQESLATYCESSDADIFLLSFLN 62 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,505,288 Number of Sequences: 219361 Number of extensions: 521324 Number of successful extensions: 1755 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 1710 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1751 length of database: 80,573,946 effective HSP length: 69 effective length of database: 65,438,037 effective search space used: 1570512888 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
