No.
Definition
Score (bits)
E Value
1 gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
763
0.0
2 emb|AJ250663.2|HVU250663 Hordeum vulgare partial mRNA for putati...
599
e-168
3 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
100
7e-18
4 gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...
100
7e-18
5 emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123...
100
7e-18
6 gb|BT017006.1| Zea mays clone EK07D2310C10.c mRNA sequence
74
4e-10
7 dbj|AK058739.1| Oryza sativa (japonica cultivar-group) cDNA clon...
66
1e-07
8 gb|BT018918.1| Zea mays clone Contig12.F mRNA sequence
50
0.006
9 gb|AY549626.1| Zea perennis isolate per7b MPI (mpi) gene, comple...
50
0.006
10 gb|AY549625.1| Zea perennis isolate per7a MPI (mpi) gene, comple...
50
0.006
11 gb|AY549624.1| Zea perennis isolate per6 MPI (mpi) gene, complet...
50
0.006
12 gb|AY549623.1| Zea perennis isolate per4d MPI (mpi) gene, comple...
50
0.006
13 gb|AY549622.1| Zea perennis isolate per4c MPI (mpi) gene, comple...
50
0.006
14 gb|AY549621.1| Zea perennis isolate per4b MPI (mpi) gene, comple...
50
0.006
15 gb|AY549619.1| Zea perennis isolate per3c MPI (mpi) gene, comple...
50
0.006
16 gb|AY549618.1| Zea perennis isolate per3b MPI (mpi) gene, comple...
50
0.006
17 gb|AY549617.1| Zea perennis isolate per3a MPI (mpi) gene, comple...
50
0.006
18 gb|AY549616.1| Zea perennis isolate per2c MPI (mpi) gene, comple...
50
0.006
19 gb|AY549614.1| Zea perennis isolate per2a MPI (mpi) gene, comple...
50
0.006
20 gb|AY549612.1| Zea perennis isolate per1b MPI (mpi) gene, comple...
50
0.006
21 gb|AY549599.1| Zea diploperennis isolate d1b MPI (mpi) gene, com...
50
0.006
22 emb|X82187.1|ZMPIS7 Z.mays mRNA for pis7
50
0.006
23 emb|X78988.2|ZMMPI Zea mays MPI gene
50
0.006
24 emb|X69972.1|ZMCIMS Z.mays mRNA for subtilisin-chymotrypsin inhi...
50
0.006
25 dbj|AK121693.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.006
26 dbj|AK063833.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.006
27 gb|AY104061.1| Zea mays PCO087322 mRNA sequence
50
0.006
28 gb|AY878693.1| Oryza sativa (japonica cultivar-group) subitilisi...
50
0.006
29 emb|AL731753.2|CNS08C82 Oryza sativa chromosome 12, . BAC OJ1112...
50
0.006
30 gb|DQ147231.1| Zea mays subsp. parviglumis isolate 11c maize pro...
50
0.006
31 gb|DQ147230.1| Zea mays subsp. parviglumis isolate 11b maize pro...
50
0.006
32 gb|DQ147229.1| Zea mays subsp. parviglumis isolate 10a maize pro...
50
0.006
33 gb|DQ147228.1| Zea mays subsp. parviglumis isolate 10b maize pro...
50
0.006
34 gb|DQ147227.1| Zea mays subsp. parviglumis isolate 9b maize prot...
50
0.006
35 gb|DQ147226.1| Zea mays subsp. parviglumis isolate 9a maize prot...
50
0.006
36 gb|DQ147225.1| Zea mays subsp. parviglumis isolate 8b maize prot...
50
0.006
37 gb|DQ147224.1| Zea mays subsp. parviglumis isolate 7a maize prot...
50
0.006
38 gb|DQ147223.1| Zea mays subsp. parviglumis isolate 6b maize prot...
50
0.006
39 gb|DQ147222.1| Zea mays subsp. parviglumis isolate 5a maize prot...
50
0.006
40 gb|DQ147221.1| Zea mays subsp. parviglumis isolate 5b maize prot...
50
0.006
41 gb|DQ147220.1| Zea mays subsp. parviglumis isolate 4b maize prot...
50
0.006
42 gb|DQ147219.1| Zea mays subsp. parviglumis isolate 4c maize prot...
50
0.006
43 gb|DQ147218.1| Zea mays subsp. parviglumis isolate 3c maize prot...
50
0.006
44 gb|DQ147217.1| Zea mays subsp. parviglumis isolate 3a maize prot...
50
0.006
45 gb|DQ147216.1| Zea mays subsp. parviglumis isolate 2a maize prot...
50
0.006
46 gb|DQ147215.1| Zea mays subsp. parviglumis isolate 1b maize prot...
50
0.006
47 gb|AY549627.1| Tripsacum dactyloides MPI (mpi) gene, complete cds
48
0.023
48 gb|AY424272.1| Brachypodium distachyon ecotype ABR5 serine prote...
48
0.023
49 gb|AY112541.1| Zea mays CL44946_1 mRNA sequence
48
0.023
50 gb|AC108157.3| Homo sapiens BAC clone RP11-580P21 from 4, comple...
44
0.36
51 gb|U51243.1|HSU51243 Human alpha-albumin gene, complete cds
44
0.36
52 gb|M21400.1|BLYCI1A Barley chymotrypsin inhibitor (CI-1A) mRNA, ...
44
0.36
53 gb|AY549620.1| Zea perennis MPI (mpi) gene, complete cds
42
1.4
54 gb|AY549615.1| Zea perennis isolate per2b MPI (mpi) gene, comple...
42
1.4
55 gb|AY549613.1| Zea perennis isolate per1c MPI (mpi) gene, comple...
42
1.4
56 gb|AY549610.1| Zea diploperennis isolate d8b MPI (mpi) gene, com...
42
1.4
57 gb|AY549609.1| Zea diploperennis isolate d8a MPI (mpi) gene, com...
42
1.4
58 gb|AY549608.1| Zea diploperennis isolate d7b MPI (mpi) gene, com...
42
1.4
59 gb|AY549607.1| Zea diploperennis isolate d7a MPI (mpi) gene, com...
42
1.4
60 gb|AY549606.1| Zea diploperennis isolate d6b MPI (mpi) gene, com...
42
1.4
61 gb|AY549605.1| Zea diploperennis isolate d6a MPI (mpi) gene, com...
42
1.4
62 gb|AY549604.1| Zea diploperennis isolate d5b MPI (mpi) gene, com...
42
1.4
63 gb|AY549603.1| Zea diploperennis isolate d5a MPI (mpi) gene, com...
42
1.4
64 gb|AY549602.1| Zea diploperennis isolate d4a MPI (mpi) gene, com...
42
1.4
65 gb|AY549601.1| Zea diploperennis isolate d3a MPI (mpi) gene, com...
42
1.4
66 gb|AY549600.1| Zea diploperennis isolate d2a MPI (mpi) gene, com...
42
1.4
67 gb|AY549598.1| Zea diploperennis isolate d1a MPI (mpi) gene, com...
42
1.4
68 ref|XM_369944.1| Magnaporthe grisea 70-15 hypothetical protein (...
40
5.7
69 emb|CT009509.7| Mouse DNA sequence from clone RP23-140C10 on chr...
40
5.7
70 ref|XM_537053.2| PREDICTED: Canis familiaris similar to Cofilin-...
40
5.7
71 gb|AC129092.13| Medicago truncatula clone mth2-17n16, complete s...
40
5.7
72 emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete ...
40
5.7
73 ref|XM_682322.1| PREDICTED: Danio rerio similar to papilin (LOC5...
40
5.7
74 gb|AC147918.2| Xenopus tropicalis clone CH216-8N16, complete seq...
40
5.7
75 gb|AF152393.1|MMTSP4S2 Mus musculus thrombospondin 4 gene, parti...
40
5.7
76 gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosy...
40
5.7
77 gb|AC166113.3| Mus musculus BAC clone RP23-23E6 from chromosome ...
40
5.7
>gb|AF427791.1 | Hordeum vulgare Mla locus, complete sequence
Length = 261265
Score = 763 bits (385), Expect = 0.0
Identities = 388/389 (99%)
Strand = Plus / Minus
Query: 33 gaatcgaggatgagctgcgccgccccaaaagcccccgccggagaggagaagaagacgtca 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220843 gaatcgaggatgagctgcgccgccccaaaagcccccgccggagaggagaagaagacgtca 220784
Query: 93 tggccggaggtagtgggaaagtccatcgaggaggccaaggagatcatccttaaggacatg 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220783 tggccggaggtagtgggaaagtccatcgaggaggccaaggagatcatccttaaggacatg 220724
Query: 153 cctgaagcggacatcgtcgtcctcccagccggctcgccggtgaccctcgacttcaggacc 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220723 cctgaagcggacatcgtcgtcctcccagccggctcgccggtgaccctcgacttcaggacc 220664
Query: 213 aaccgtgtccgcatcttcgtcgacactgtcgcgtccactccccacattggctagctagct 272
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 220663 aaccgtgtccgcatcttcgtcgacactgtcgcgtccattccccacattggctagctagct 220604
Query: 273 ttgcaagcaaaggcaacatggatgcattgtggatgctgatgaataagtacttccaataag 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220603 ttgcaagcaaaggcaacatggatgcattgtggatgctgatgaataagtacttccaataag 220544
Query: 333 catggatcaataaatagatgctgaccaccagcatgctacctgtggatcaatgtacttgac 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220543 catggatcaataaatagatgctgaccaccagcatgctacctgtggatcaatgtacttgac 220484
Query: 393 cagttatttataatttgtgcttcatatta 421
|||||||||||||||||||||||||||||
Sbjct: 220483 cagttatttataatttgtgcttcatatta 220455
Score = 174 bits (88), Expect = 1e-40
Identities = 124/136 (91%)
Strand = Plus / Minus
Query: 33 gaatcgaggatgagctgcgccgccccaaaagcccccgccggagaggagaagaagacgtca 92
|||||||||||||||||||| | ||||||||| |||||||| |||||||||||| |||||
Sbjct: 217773 gaatcgaggatgagctgcgctgacccaaaagcacccgccggtgaggagaagaagtcgtca 217714
Query: 93 tggccggaggtagtgggaaagtccatcgaggaggccaaggagatcatccttaaggacatg 152
||||||||| ||||||| |||||||||||||| |||| |||| ||||||| |||||||||
Sbjct: 217713 tggccggagttagtggggaagtccatcgaggacgccagggaggtcatcctcaaggacatg 217654
Query: 153 cctgaagcggacatcg 168
||||||| ||||||||
Sbjct: 217653 cctgaagtggacatcg 217638
Score = 167 bits (84), Expect = 4e-38
Identities = 180/212 (84%)
Strand = Plus / Minus
Query: 65 ccccgccggagaggagaagaagacgtcatggccggaggtagtgggaaagtccatcgagga 124
||||||||| |||||||||||| |||||||||||||| ||||||| ||||||||||||||
Sbjct: 223976 ccccgccggtgaggagaagaagtcgtcatggccggagttagtggggaagtccatcgagga 223917
Query: 125 ggccaaggagatcatccttaaggacatgcctgaagcggacatcgtcgtcctcccagccgg 184
|||| |||| ||||||| ||||| |||||||||||||||||| |||||||| |||
Sbjct: 223916 cgccagggaggtcatcctcaaggatatgcctgaagcggacatcaaagtcctccccgccaa 223857
Query: 185 ctcgccggtgaccctcgacttcaggaccaaccgtgtccgcatcttcgtcgacactgtcgc 244
||| |||| || |||| |||| ||||||||||||| || | ||||||||||||||
Sbjct: 223856 ctccgtggtggccgcagactggaggagcaaccgtgtccgcgtcctggtcgacactgtcgc 223797
Query: 245 gtccactccccacattggctagctagctttgc 276
| ||||||| ||||| |||||||||| |||||
Sbjct: 223796 gaccactcctcacatcggctagctagatttgc 223765
Score = 123 bits (62), Expect = 5e-25
Identities = 131/154 (85%)
Strand = Plus / Plus
Query: 81 aagaagacgtcatggccggaggtagtgggaaagtccatcgaggaggccaaggagatcatc 140
||||||||||| ||||||||||| || || | ||||| |||||||||||||||||||
Sbjct: 206987 aagaagacgtcttggccggaggtggtcggcctgaccatcaaggaggccaaggagatcatt 207046
Query: 141 cttaaggacatgcctgaagcggacatcgtcgtcctcccagccggctcgccggtgaccctc 200
|| ||||||| ||||||||| |||||||||||| | || | ||||| ||||||||
Sbjct: 207047 ctcaaggacaagcctgaagccgacatcgtcgtcgtgccggttggctcagcggtgaccgaa 207106
Query: 201 gacttcaggaccaaccgtgtccgcatcttcgtcg 234
||||||||| ||||||||||||||||||||||||
Sbjct: 207107 gacttcaggcccaaccgtgtccgcatcttcgtcg 207140
Score = 119 bits (60), Expect = 8e-24
Identities = 102/116 (87%)
Strand = Plus / Minus
Query: 65 ccccgccggagaggagaagaagacgtcatggccggaggtagtgggaaagtccatcgagga 124
||||||||| |||||||||||| |||| ||| ||||| ||||||| ||||||||||||||
Sbjct: 225117 ccccgccggtgaggagaagaagtcgtcctgggcggagttagtggggaagtccatcgagga 225058
Query: 125 ggccaaggagatcatccttaaggacatgcctgaagcggacatcgtcgtcctcccag 180
|||| | || ||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 225057 cgccaggaaggtcatcctcaaggacatgcctgaagcggacatcaaagtcctcccag 225002
Score = 83.8 bits (42), Expect = 4e-13
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 207 aggaccaaccgtgtccgcatcttcgtcgacactgtcgcgtccactccccacattggctag 266
|||| |||||||||||||||| |||| |||||||||||| ||||||| ||||| ||||||
Sbjct: 217599 aggagcaaccgtgtccgcatcctcgttgacactgtcgcgaccactcctcacatcggctag 217540
Query: 267 ctagct 272
||||||
Sbjct: 217539 ctagct 217534
Score = 48.1 bits (24), Expect = 0.023
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 1 aaatactcatatcagtcaagttca 24
||||||||||||||||||||||||
Sbjct: 221036 aaatactcatatcagtcaagttca 221013
Score = 40.1 bits (20), Expect = 5.7
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1 aaatactcatatcagtcaagttca 24
|||||||| |||||||||||||||
Sbjct: 218495 aaatactcgtatcagtcaagttca 218472
>dbj|AP008218.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 99.6 bits (50), Expect = 7e-18
Identities = 134/162 (82%)
Strand = Plus / Minus
Query: 83 gaagacgtcatggccggaggtagtgggaaagtccatcgaggaggccaaggagatcatcct 142
||||||||| ||||||||||| ||||| ||| |||||||| ||| || | |||||
Sbjct: 22227438 gaagacgtcgtggccggaggtggtggggctgtcggcggaggaggcgaagaaggtgatcct 22227379
Query: 143 taaggacatgcctgaagcggacatcgtcgtcctcccagccggctcgccggtgaccctcga 202
||||||||||| || || ||||||||||| || || || || |||||||||||||||||
Sbjct: 22227378 caaggacatgcccgacgccgacatcgtcgtgcttccggcggggtcgccggtgaccctcga 22227319
Query: 203 cttcaggaccaaccgtgtccgcatcttcgtcgacactgtcgc 244
|||| | ||||||| |||||||||||||| ||||| |||||
Sbjct: 22227318 cttccgctccaaccgcgtccgcatcttcgttgacaccgtcgc 22227277
Score = 65.9 bits (33), Expect = 1e-07
Identities = 102/125 (81%)
Strand = Plus / Minus
Query: 120 gaggaggccaaggagatcatccttaaggacatgcctgaagcggacatcgtcgtcctccca 179
|||||||| ||| || | ||||| ||||||||||| || || ||||||||||| | ||
Sbjct: 22236734 gaggaggcgaagaaggtgatcctcaaggacatgcccgacgccgacatcgtcgtggttccg 22236675
Query: 180 gccggctcgccggtgaccctcgacttcaggaccaaccgtgtccgcatcttcgtcgacact 239
| || ||||||||||| | |||||| | ||||||| ||||||||||||||||||||
Sbjct: 22236674 gtggggacgccggtgaccatggacttccgccccaaccgcgtccgcatcttcgtcgacacc 22236615
Query: 240 gtcgc 244
|||||
Sbjct: 22236614 gtcgc 22236610
Score = 58.0 bits (29), Expect = 2e-05
Identities = 132/166 (79%), Gaps = 4/166 (2%)
Strand = Plus / Minus
Query: 83 gaagacgtcatggccggaggtagtgggaaagtccatcgaggaggccaaggagatcatcct 142
||||||||| ||||||||||| ||||| | | | |||||||| ||| || | |||||
Sbjct: 22232067 gaagacgtcgtggccggaggtggtggggctgccggtggaggaggcgaagaaggtgatcct 22232008
Query: 143 taaggacatgcctgaagcggacatcgtcgtcctcccagccggctcgccgg----tgaccc 198
||||||||||| || || ||||||||||| || || || || ||||||| |||||
Sbjct: 22232007 caaggacatgcccgacgccgacatcgtcgtgcttccggcggggtcgccggccggtgacca 22231948
Query: 199 tcgacttcaggaccaaccgtgtccgcatcttcgtcgacactgtcgc 244
|||||| | ||||||| |||||||||||||||||||| |||||
Sbjct: 22231947 aggacttccgccccaaccgcgtccgcatcttcgtcgacaccgtcgc 22231902
Score = 50.1 bits (25), Expect = 0.006
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 212 caaccgtgtccgcatcttcgtcgacactgtcgc 244
|||||||||||| |||||||||||||| |||||
Sbjct: 14455912 caaccgtgtccgaatcttcgtcgacaccgtcgc 14455880
>gb|DP000011.1 | Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 99.6 bits (50), Expect = 7e-18
Identities = 134/162 (82%)
Strand = Plus / Minus
Query: 83 gaagacgtcatggccggaggtagtgggaaagtccatcgaggaggccaaggagatcatcct 142
||||||||| ||||||||||| ||||| ||| |||||||| ||| || | |||||
Sbjct: 22155783 gaagacgtcgtggccggaggtggtggggctgtcggcggaggaggcgaagaaggtgatcct 22155724
Query: 143 taaggacatgcctgaagcggacatcgtcgtcctcccagccggctcgccggtgaccctcga 202
||||||||||| || || ||||||||||| || || || || |||||||||||||||||
Sbjct: 22155723 caaggacatgcccgacgccgacatcgtcgtgcttccggcggggtcgccggtgaccctcga 22155664
Query: 203 cttcaggaccaaccgtgtccgcatcttcgtcgacactgtcgc 244
|||| | ||||||| |||||||||||||| ||||| |||||
Sbjct: 22155663 cttccgctccaaccgcgtccgcatcttcgttgacaccgtcgc 22155622
Score = 65.9 bits (33), Expect = 1e-07
Identities = 102/125 (81%)
Strand = Plus / Minus
Query: 120 gaggaggccaaggagatcatccttaaggacatgcctgaagcggacatcgtcgtcctccca 179
|||||||| ||| || | ||||| ||||||||||| || || ||||||||||| | ||
Sbjct: 22165079 gaggaggcgaagaaggtgatcctcaaggacatgcccgacgccgacatcgtcgtggttccg 22165020
Query: 180 gccggctcgccggtgaccctcgacttcaggaccaaccgtgtccgcatcttcgtcgacact 239
| || ||||||||||| | |||||| | ||||||| ||||||||||||||||||||
Sbjct: 22165019 gtggggacgccggtgaccatggacttccgccccaaccgcgtccgcatcttcgtcgacacc 22164960
Query: 240 gtcgc 244
|||||
Sbjct: 22164959 gtcgc 22164955
Score = 58.0 bits (29), Expect = 2e-05
Identities = 132/166 (79%), Gaps = 4/166 (2%)
Strand = Plus / Minus
Query: 83 gaagacgtcatggccggaggtagtgggaaagtccatcgaggaggccaaggagatcatcct 142
||||||||| ||||||||||| ||||| | | | |||||||| ||| || | |||||
Sbjct: 22160412 gaagacgtcgtggccggaggtggtggggctgccggtggaggaggcgaagaaggtgatcct 22160353
Query: 143 taaggacatgcctgaagcggacatcgtcgtcctcccagccggctcgccgg----tgaccc 198
||||||||||| || || ||||||||||| || || || || ||||||| |||||
Sbjct: 22160352 caaggacatgcccgacgccgacatcgtcgtgcttccggcggggtcgccggccggtgacca 22160293
Query: 199 tcgacttcaggaccaaccgtgtccgcatcttcgtcgacactgtcgc 244
|||||| | ||||||| |||||||||||||||||||| |||||
Sbjct: 22160292 aggacttccgccccaaccgcgtccgcatcttcgtcgacaccgtcgc 22160247
Score = 50.1 bits (25), Expect = 0.006
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 212 caaccgtgtccgcatcttcgtcgacactgtcgc 244
|||||||||||| |||||||||||||| |||||
Sbjct: 14410196 caaccgtgtccgaatcttcgtcgacaccgtcgc 14410164
>emb|AL731742.3 |CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123_B09 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 155585
Score = 99.6 bits (50), Expect = 7e-18
Identities = 134/162 (82%)
Strand = Plus / Plus
Query: 83 gaagacgtcatggccggaggtagtgggaaagtccatcgaggaggccaaggagatcatcct 142
||||||||| ||||||||||| ||||| ||| |||||||| ||| || | |||||
Sbjct: 25572 gaagacgtcgtggccggaggtggtggggctgtcggcggaggaggcgaagaaggtgatcct 25631
Query: 143 taaggacatgcctgaagcggacatcgtcgtcctcccagccggctcgccggtgaccctcga 202
||||||||||| || || ||||||||||| || || || || |||||||||||||||||
Sbjct: 25632 caaggacatgcccgacgccgacatcgtcgtgcttccggcggggtcgccggtgaccctcga 25691
Query: 203 cttcaggaccaaccgtgtccgcatcttcgtcgacactgtcgc 244
|||| | ||||||| |||||||||||||| ||||| |||||
Sbjct: 25692 cttccgctccaaccgcgtccgcatcttcgttgacaccgtcgc 25733
Score = 65.9 bits (33), Expect = 1e-07
Identities = 102/125 (81%)
Strand = Plus / Plus
Query: 120 gaggaggccaaggagatcatccttaaggacatgcctgaagcggacatcgtcgtcctccca 179
|||||||| ||| || | ||||| ||||||||||| || || ||||||||||| | ||
Sbjct: 16276 gaggaggcgaagaaggtgatcctcaaggacatgcccgacgccgacatcgtcgtggttccg 16335
Query: 180 gccggctcgccggtgaccctcgacttcaggaccaaccgtgtccgcatcttcgtcgacact 239
| || ||||||||||| | |||||| | ||||||| ||||||||||||||||||||
Sbjct: 16336 gtggggacgccggtgaccatggacttccgccccaaccgcgtccgcatcttcgtcgacacc 16395
Query: 240 gtcgc 244
|||||
Sbjct: 16396 gtcgc 16400
Score = 58.0 bits (29), Expect = 2e-05
Identities = 132/166 (79%), Gaps = 4/166 (2%)
Strand = Plus / Plus
Query: 83 gaagacgtcatggccggaggtagtgggaaagtccatcgaggaggccaaggagatcatcct 142
||||||||| ||||||||||| ||||| | | | |||||||| ||| || | |||||
Sbjct: 20943 gaagacgtcgtggccggaggtggtggggctgccggtggaggaggcgaagaaggtgatcct 21002
Query: 143 taaggacatgcctgaagcggacatcgtcgtcctcccagccggctcgccgg----tgaccc 198
||||||||||| || || ||||||||||| || || || || ||||||| |||||
Sbjct: 21003 caaggacatgcccgacgccgacatcgtcgtgcttccggcggggtcgccggccggtgacca 21062
Query: 199 tcgacttcaggaccaaccgtgtccgcatcttcgtcgacactgtcgc 244
|||||| | ||||||| |||||||||||||||||||| |||||
Sbjct: 21063 aggacttccgccccaaccgcgtccgcatcttcgtcgacaccgtcgc 21108
>gb|AC166113.3 | Mus musculus BAC clone RP23-23E6 from chromosome 14, complete sequence
Length = 252394
Score = 40.1 bits (20), Expect = 5.7
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 123 gaggccaaggagatcatccttaaggaca 150
||||||||| ||| ||||||||||||||
Sbjct: 98517 gaggccaagcagaacatccttaaggaca 98490
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,823,262
Number of Sequences: 3902068
Number of extensions: 3823262
Number of successful extensions: 75221
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74907
Number of HSP's gapped (non-prelim): 312
length of query: 422
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 400
effective length of database: 17,147,199,772
effective search space: 6858879908800
effective search space used: 6858879908800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)