Clone Name | bart07g08 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_462955.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1011 Score = 519 bits (262), Expect = e-144 Identities = 381/420 (90%), Gaps = 3/420 (0%) Strand = Plus / Plus Query: 106 ccgccttcgccggcgccaacgacctggtcggcgagctccagtccctccgctcccgctccc 165 |||||| |||||||||| | |||||||||| |||||| || ||||| || |||||||||| Sbjct: 59 ccgcctccgccggcgccgatgacctggtcgccgagctgcaatccctgcggtcccgctccc 118 Query: 166 cctcgggggtggtccacctcaccgacacctccgtcacccgcttcctctcgtc---ggcct 222 | ||||| ||| |||||||||||||||||||| ||||||||||||| || | ||| Sbjct: 119 cgtcgggcgtgatccacctcaccgacacctccatcacccgcttcctatccgccccggcgc 178 Query: 223 cgcgcccctactccgtcctcgtcttcttcgacgccacctcgctccactccaagaccgacc 282 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 179 cgcgcccctactccgtgctcgtcttcttcgacgccgcctcgctccactccaagaccgacc 238 Query: 283 tccacctcccccagctccgccgcgagttcgcgctcctctccgcctccttccacgccaaca 342 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||| Sbjct: 239 tccacctcccccagctccgccgcgagttcgccctcctctccgcctccttcctcgcccaca 298 Query: 343 accccgactcctccgacctcttcttcgccgacatcgagttctccgagtcgcagcactcct 402 |||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 299 accccgcctccgccgacctcttcttcgccgacatcgagttctcggagtcgcagcactcgt 358 Query: 403 actcccagttcggcgtcaactccctcccccatgtccgcctcatccgcccggagcactccc 462 | | |||||||||||||||||||||||||| ||||||||| ||||||| |||||| ||| Sbjct: 359 tcgcgcagttcggcgtcaactccctcccccacgtccgcctcgtccgccccgagcacaccc 418 Query: 463 gcctcgccgactccgagcagatggaccagtcccacttctcccgcctcgccgattccatgg 522 ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 419 gcctcgctggctccgagcagatggaccagtcccacttctcccgcctcgccgactccatgg 478
>gb|AC016781.6| Oryza sativa (japonica cultivar-group) clone OSJNBa0084C09, complete sequence Length = 151269 Score = 519 bits (262), Expect = e-144 Identities = 381/420 (90%), Gaps = 3/420 (0%) Strand = Plus / Minus Query: 106 ccgccttcgccggcgccaacgacctggtcggcgagctccagtccctccgctcccgctccc 165 |||||| |||||||||| | |||||||||| |||||| || ||||| || |||||||||| Sbjct: 95490 ccgcctccgccggcgccgatgacctggtcgccgagctgcaatccctgcggtcccgctccc 95431 Query: 166 cctcgggggtggtccacctcaccgacacctccgtcacccgcttcctctcgtc---ggcct 222 | ||||| ||| |||||||||||||||||||| ||||||||||||| || | ||| Sbjct: 95430 cgtcgggcgtgatccacctcaccgacacctccatcacccgcttcctatccgccccggcgc 95371 Query: 223 cgcgcccctactccgtcctcgtcttcttcgacgccacctcgctccactccaagaccgacc 282 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 95370 cgcgcccctactccgtgctcgtcttcttcgacgccgcctcgctccactccaagaccgacc 95311 Query: 283 tccacctcccccagctccgccgcgagttcgcgctcctctccgcctccttccacgccaaca 342 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||| Sbjct: 95310 tccacctcccccagctccgccgcgagttcgccctcctctccgcctccttcctcgcccaca 95251 Query: 343 accccgactcctccgacctcttcttcgccgacatcgagttctccgagtcgcagcactcct 402 |||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 95250 accccgcctccgccgacctcttcttcgccgacatcgagttctcggagtcgcagcactcgt 95191 Query: 403 actcccagttcggcgtcaactccctcccccatgtccgcctcatccgcccggagcactccc 462 | | |||||||||||||||||||||||||| ||||||||| ||||||| |||||| ||| Sbjct: 95190 tcgcgcagttcggcgtcaactccctcccccacgtccgcctcgtccgccccgagcacaccc 95131 Query: 463 gcctcgccgactccgagcagatggaccagtcccacttctcccgcctcgccgattccatgg 522 ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95130 gcctcgctggctccgagcagatggaccagtcccacttctcccgcctcgccgactccatgg 95071
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 519 bits (262), Expect = e-144 Identities = 381/420 (90%), Gaps = 3/420 (0%) Strand = Plus / Minus Query: 106 ccgccttcgccggcgccaacgacctggtcggcgagctccagtccctccgctcccgctccc 165 |||||| |||||||||| | |||||||||| |||||| || ||||| || |||||||||| Sbjct: 20177406 ccgcctccgccggcgccgatgacctggtcgccgagctgcaatccctgcggtcccgctccc 20177347 Query: 166 cctcgggggtggtccacctcaccgacacctccgtcacccgcttcctctcgtc---ggcct 222 | ||||| ||| |||||||||||||||||||| ||||||||||||| || | ||| Sbjct: 20177346 cgtcgggcgtgatccacctcaccgacacctccatcacccgcttcctatccgccccggcgc 20177287 Query: 223 cgcgcccctactccgtcctcgtcttcttcgacgccacctcgctccactccaagaccgacc 282 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 20177286 cgcgcccctactccgtgctcgtcttcttcgacgccgcctcgctccactccaagaccgacc 20177227 Query: 283 tccacctcccccagctccgccgcgagttcgcgctcctctccgcctccttccacgccaaca 342 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||| Sbjct: 20177226 tccacctcccccagctccgccgcgagttcgccctcctctccgcctccttcctcgcccaca 20177167 Query: 343 accccgactcctccgacctcttcttcgccgacatcgagttctccgagtcgcagcactcct 402 |||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 20177166 accccgcctccgccgacctcttcttcgccgacatcgagttctcggagtcgcagcactcgt 20177107 Query: 403 actcccagttcggcgtcaactccctcccccatgtccgcctcatccgcccggagcactccc 462 | | |||||||||||||||||||||||||| ||||||||| ||||||| |||||| ||| Sbjct: 20177106 tcgcgcagttcggcgtcaactccctcccccacgtccgcctcgtccgccccgagcacaccc 20177047 Query: 463 gcctcgccgactccgagcagatggaccagtcccacttctcccgcctcgccgattccatgg 522 ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 20177046 gcctcgctggctccgagcagatggaccagtcccacttctcccgcctcgccgactccatgg 20176987 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 63 caccacctcctcctcccgctcctcc 87 ||||||||||||||||| ||||||| Sbjct: 28176161 caccacctcctcctccccctcctcc 28176137 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctcg 90 ||||||||||||||||| |||||||||| Sbjct: 12320979 ccaccacctcctcctcctcctcctcctcg 12320951 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 ccacctcctcctcccgctcctcctc 89 ||||||||||||||| ||||||||| Sbjct: 6444672 ccacctcctcctccccctcctcctc 6444648 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 gccgcctccgccttcgccggcgcca 123 ||||||||||||||||||| ||||| Sbjct: 1621349 gccgcctccgccttcgccgccgcca 1621373 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgc 81 |||||||||||||||||||| Sbjct: 1731229 ccaccacctcctcctcccgc 1731248
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 519 bits (262), Expect = e-144 Identities = 381/420 (90%), Gaps = 3/420 (0%) Strand = Plus / Minus Query: 106 ccgccttcgccggcgccaacgacctggtcggcgagctccagtccctccgctcccgctccc 165 |||||| |||||||||| | |||||||||| |||||| || ||||| || |||||||||| Sbjct: 20170433 ccgcctccgccggcgccgatgacctggtcgccgagctgcaatccctgcggtcccgctccc 20170374 Query: 166 cctcgggggtggtccacctcaccgacacctccgtcacccgcttcctctcgtc---ggcct 222 | ||||| ||| |||||||||||||||||||| ||||||||||||| || | ||| Sbjct: 20170373 cgtcgggcgtgatccacctcaccgacacctccatcacccgcttcctatccgccccggcgc 20170314 Query: 223 cgcgcccctactccgtcctcgtcttcttcgacgccacctcgctccactccaagaccgacc 282 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 20170313 cgcgcccctactccgtgctcgtcttcttcgacgccgcctcgctccactccaagaccgacc 20170254 Query: 283 tccacctcccccagctccgccgcgagttcgcgctcctctccgcctccttccacgccaaca 342 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||| Sbjct: 20170253 tccacctcccccagctccgccgcgagttcgccctcctctccgcctccttcctcgcccaca 20170194 Query: 343 accccgactcctccgacctcttcttcgccgacatcgagttctccgagtcgcagcactcct 402 |||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 20170193 accccgcctccgccgacctcttcttcgccgacatcgagttctcggagtcgcagcactcgt 20170134 Query: 403 actcccagttcggcgtcaactccctcccccatgtccgcctcatccgcccggagcactccc 462 | | |||||||||||||||||||||||||| ||||||||| ||||||| |||||| ||| Sbjct: 20170133 tcgcgcagttcggcgtcaactccctcccccacgtccgcctcgtccgccccgagcacaccc 20170074 Query: 463 gcctcgccgactccgagcagatggaccagtcccacttctcccgcctcgccgattccatgg 522 ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 20170073 gcctcgctggctccgagcagatggaccagtcccacttctcccgcctcgccgactccatgg 20170014 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 63 caccacctcctcctcccgctcctcc 87 ||||||||||||||||| ||||||| Sbjct: 28267485 caccacctcctcctccccctcctcc 28267461 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctcg 90 ||||||||||||||||| |||||||||| Sbjct: 12317742 ccaccacctcctcctcctcctcctcctcg 12317714 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 ccacctcctcctcccgctcctcctc 89 ||||||||||||||| ||||||||| Sbjct: 6443885 ccacctcctcctccccctcctcctc 6443861 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 gccgcctccgccttcgccggcgcca 123 ||||||||||||||||||| ||||| Sbjct: 1621347 gccgcctccgccttcgccgccgcca 1621371 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgc 81 |||||||||||||||||||| Sbjct: 1731227 ccaccacctcctcctcccgc 1731246
>dbj|AK109347.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-G06, full insert sequence Length = 1273 Score = 519 bits (262), Expect = e-144 Identities = 381/420 (90%), Gaps = 3/420 (0%) Strand = Plus / Plus Query: 106 ccgccttcgccggcgccaacgacctggtcggcgagctccagtccctccgctcccgctccc 165 |||||| |||||||||| | |||||||||| |||||| || ||||| || |||||||||| Sbjct: 77 ccgcctccgccggcgccgatgacctggtcgccgagctgcaatccctgcggtcccgctccc 136 Query: 166 cctcgggggtggtccacctcaccgacacctccgtcacccgcttcctctcgtc---ggcct 222 | ||||| ||| |||||||||||||||||||| ||||||||||||| || | ||| Sbjct: 137 cgtcgggcgtgatccacctcaccgacacctccatcacccgcttcctatccgccccggcgc 196 Query: 223 cgcgcccctactccgtcctcgtcttcttcgacgccacctcgctccactccaagaccgacc 282 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 197 cgcgcccctactccgtgctcgtcttcttcgacgccgcctcgctccactccaagaccgacc 256 Query: 283 tccacctcccccagctccgccgcgagttcgcgctcctctccgcctccttccacgccaaca 342 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||| Sbjct: 257 tccacctcccccagctccgccgcgagttcgccctcctctccgcctccttcctcgcccaca 316 Query: 343 accccgactcctccgacctcttcttcgccgacatcgagttctccgagtcgcagcactcct 402 |||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 317 accccgcctccgccgacctcttcttcgccgacatcgagttctcggagtcgcagcactcgt 376 Query: 403 actcccagttcggcgtcaactccctcccccatgtccgcctcatccgcccggagcactccc 462 | | |||||||||||||||||||||||||| ||||||||| ||||||| |||||| ||| Sbjct: 377 tcgcgcagttcggcgtcaactccctcccccacgtccgcctcgtccgccccgagcacaccc 436 Query: 463 gcctcgccgactccgagcagatggaccagtcccacttctcccgcctcgccgattccatgg 522 ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 437 gcctcgctggctccgagcagatggaccagtcccacttctcccgcctcgccgactccatgg 496
>dbj|AK102421.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093D18, full insert sequence Length = 1398 Score = 519 bits (262), Expect = e-144 Identities = 381/420 (90%), Gaps = 3/420 (0%) Strand = Plus / Plus Query: 106 ccgccttcgccggcgccaacgacctggtcggcgagctccagtccctccgctcccgctccc 165 |||||| |||||||||| | |||||||||| |||||| || ||||| || |||||||||| Sbjct: 97 ccgcctccgccggcgccgatgacctggtcgccgagctgcaatccctgcggtcccgctccc 156 Query: 166 cctcgggggtggtccacctcaccgacacctccgtcacccgcttcctctcgtc---ggcct 222 | ||||| ||| |||||||||||||||||||| ||||||||||||| || | ||| Sbjct: 157 cgtcgggcgtgatccacctcaccgacacctccatcacccgcttcctatccgccccggcgc 216 Query: 223 cgcgcccctactccgtcctcgtcttcttcgacgccacctcgctccactccaagaccgacc 282 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 217 cgcgcccctactccgtgctcgtcttcttcgacgccgcctcgctccactccaagaccgacc 276 Query: 283 tccacctcccccagctccgccgcgagttcgcgctcctctccgcctccttccacgccaaca 342 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||| Sbjct: 277 tccacctcccccagctccgccgcgagttcgccctcctctccgcctccttcctcgcccaca 336 Query: 343 accccgactcctccgacctcttcttcgccgacatcgagttctccgagtcgcagcactcct 402 |||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 337 accccgcctccgccgacctcttcttcgccgacatcgagttctcggagtcgcagcactcgt 396 Query: 403 actcccagttcggcgtcaactccctcccccatgtccgcctcatccgcccggagcactccc 462 | | |||||||||||||||||||||||||| ||||||||| ||||||| |||||| ||| Sbjct: 397 tcgcgcagttcggcgtcaactccctcccccacgtccgcctcgtccgccccgagcacaccc 456 Query: 463 gcctcgccgactccgagcagatggaccagtcccacttctcccgcctcgccgattccatgg 522 ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 457 gcctcgctggctccgagcagatggaccagtcccacttctcccgcctcgccgactccatgg 516
>dbj|AK061364.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-D03, full insert sequence Length = 1328 Score = 519 bits (262), Expect = e-144 Identities = 381/420 (90%), Gaps = 3/420 (0%) Strand = Plus / Plus Query: 106 ccgccttcgccggcgccaacgacctggtcggcgagctccagtccctccgctcccgctccc 165 |||||| |||||||||| | |||||||||| |||||| || ||||| || |||||||||| Sbjct: 92 ccgcctccgccggcgccgatgacctggtcgccgagctgcaatccctgcggtcccgctccc 151 Query: 166 cctcgggggtggtccacctcaccgacacctccgtcacccgcttcctctcgtc---ggcct 222 | ||||| ||| |||||||||||||||||||| ||||||||||||| || | ||| Sbjct: 152 cgtcgggcgtgatccacctcaccgacacctccatcacccgcttcctatccgccccggcgc 211 Query: 223 cgcgcccctactccgtcctcgtcttcttcgacgccacctcgctccactccaagaccgacc 282 |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 212 cgcgcccctactccgtgctcgtcttcttcgacgccgcctcgctccactccaagaccgacc 271 Query: 283 tccacctcccccagctccgccgcgagttcgcgctcctctccgcctccttccacgccaaca 342 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||| Sbjct: 272 tccacctcccccagctccgccgcgagttcgccctcctctccgcctccttcctcgcccaca 331 Query: 343 accccgactcctccgacctcttcttcgccgacatcgagttctccgagtcgcagcactcct 402 |||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 332 accccgcctccgccgacctcttcttcgccgacatcgagttctcggagtcgcagcactcgt 391 Query: 403 actcccagttcggcgtcaactccctcccccatgtccgcctcatccgcccggagcactccc 462 | | |||||||||||||||||||||||||| ||||||||| ||||||| |||||| ||| Sbjct: 392 tcgcgcagttcggcgtcaactccctcccccacgtccgcctcgtccgccccgagcacaccc 451 Query: 463 gcctcgccgactccgagcagatggaccagtcccacttctcccgcctcgccgattccatgg 522 ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 452 gcctcgctggctccgagcagatggaccagtcccacttctcccgcctcgccgactccatgg 511
>gb|BT017829.1| Zea mays clone EL01N0508G07.c mRNA sequence Length = 1374 Score = 276 bits (139), Expect = 7e-71 Identities = 329/391 (84%), Gaps = 6/391 (1%) Strand = Plus / Plus Query: 138 gagctccagtccctccgctcccgctccccctcgggggtggtccacctcaccgacacctcc 197 |||||||| || |||||| | || ||||| || || ||| |||||||||||||||||||| Sbjct: 134 gagctccaatctctccgcgcgcggtccccgtccggcgtgatccacctcaccgacacctcc 193 Query: 198 gtcacccgcttcctctcgtcggcct-cgcgc-----ccctactccgtcctcgtcttcttc 251 |||||||| |||||||| | ||| ||||| ||||||||||| ||||| |||||| Sbjct: 194 gtcacccgtttcctctccgccccctccgcgcgccgcccctactccgtgctcgtattcttc 253 Query: 252 gacgccacctcgctccactccaagaccgacctccacctcccccagctccgccgcgagttc 311 |||||| | ||||||||||| ||| | ||||||||||| |||||||||||| ||||||| Sbjct: 254 gacgccgcttcgctccactcaaagcctgacctccacctgccccagctccgcaccgagttc 313 Query: 312 gcgctcctctccgcctccttccacgccaacaaccccgactcctccgacctcttcttcgcc 371 |||||||||||||||||||||| ||| |||||||||| || |||||||||||||||| Sbjct: 314 gcgctcctctccgcctccttcctcgctcacaaccccgattctggcgacctcttcttcgcc 373 Query: 372 gacatcgagttctccgagtcgcagcactcctactcccagttcggcgtcaactccctcccc 431 |||||||||||| |||||||||||||||||| |||||| || |||||||| || ||| Sbjct: 374 gacatcgagttcgccgagtcgcagcactcctttcaccagtttggtgtcaactcgctgccc 433 Query: 432 catgtccgcctcatccgcccggagcactcccgcctcgccgactccgagcagatggaccag 491 ||| ||||||||||||| | || ||| || ||| | | |||||||||||||||||| Sbjct: 434 catatccgcctcatccgttccgatcacgccaccctgtcgggatccgagcagatggaccag 493 Query: 492 tcccacttctcccgcctcgccgattccatgg 522 ||||||||| | ||||||||||| ||||||| Sbjct: 494 tcccacttcgcgcgcctcgccgactccatgg 524
>gb|DQ296190.1| Brassica rapa clone 55 unknown mRNA Length = 1189 Score = 73.8 bits (37), Expect = 5e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 228 ccctactccgtcctcgtcttcttcgacgccacctcgctccactccaagaccgacctccac 287 |||||||| ||||| |||||||||||||||| ||||||| ||| ||||| |||| Sbjct: 228 ccctactcaatcctcctcttcttcgacgccactcagctccacagcaaaaccgagctccgt 287 Query: 288 ctcccccagctccgccgcgagttcgcgctcctctccgcctccttccacgccaacaac 344 |||| |||||||||||||||||| ||| |||||||| |||||| |||||||||| Sbjct: 288 ctccaagagctccgccgcgagttcggcctcgtctccgccaccttcctcgccaacaac 344
>gb|AY023244.1| Oryza sativa microsatellite MRG5569 containing (GGA)X8, closest to marker RG541, genomic sequence Length = 224 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 68 cctcctcctcccgctcctcctcgc 91 |||||||||||||||||||||||| Sbjct: 111 cctcctcctcccgctcctcctcgc 88
>gb|AC164880.3| Mus musculus BAC clone RP23-321G17 from chromosome 7, complete sequence Length = 210387 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| |||||||||| Sbjct: 166817 ccaccacctcctcctcctgctcctcctc 166790 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 167282 ccaccacctcctcctcctcctcctcctc 167255 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 167113 ccaccacctcctcctcctcctcctcctc 167086
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 68 cctcctcctcccgctcctcctcgc 91 |||||||||||||||||||||||| Sbjct: 32019584 cctcctcctcccgctcctcctcgc 32019607 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 tccctccgctcccgctccccc 167 ||||||||||||||||||||| Sbjct: 26812838 tccctccgctcccgctccccc 26812818 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 tcctcccgctcctcctcgcggcggc 97 |||||||||||||||||||| |||| Sbjct: 24405109 tcctcccgctcctcctcgcgtcggc 24405085 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 gctcctcctcgcggcggctgccgcc 104 |||||||||||| |||||||||||| Sbjct: 21269899 gctcctcctcgccgcggctgccgcc 21269875 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctgccgcctccgccttcgcc 116 |||||||||||||||||||| Sbjct: 10087584 ctgccgcctccgccttcgcc 10087565 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 cctcctcctcccgctcctcctcgc 91 ||||||||||| |||||||||||| Sbjct: 8890373 cctcctcctcctgctcctcctcgc 8890350
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 68 cctcctcctcccgctcctcctcgc 91 |||||||||||||||||||||||| Sbjct: 61398 cctcctcctcccgctcctcctcgc 61421
>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460E08 Length = 170021 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 68 cctcctcctcccgctcctcctcgc 91 |||||||||||||||||||||||| Sbjct: 116311 cctcctcctcccgctcctcctcgc 116334
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 63 caccacctcctcctcccgctcctcctc 89 |||||||||||| |||||||||||||| Sbjct: 258125 caccacctcctcttcccgctcctcctc 258099
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.11 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 69 ctcctcctcccgctcctcctcgcg-gcggctgccg 102 ||||||||||| |||||||||||| |||||||||| Sbjct: 2601542 ctcctcctccctctcctcctcgcgcgcggctgccg 2601576 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 68 cctcctcctcccgctcctcctcgcggcggc 97 ||||||||||| ||||||||||||||||| Sbjct: 16748385 cctcctcctcctcctcctcctcgcggcggc 16748356 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 ctgccgcctccgccttcgcc 116 |||||||||||||||||||| Sbjct: 18471031 ctgccgcctccgccttcgcc 18471050
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctcgcg 92 ||||||||||||||||| |||||||| |||| Sbjct: 13539778 ccaccacctcctcctccggctcctccacgcg 13539748 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 cgtcctcgtcttcttcgacg 255 |||||||||||||||||||| Sbjct: 14782286 cgtcctcgtcttcttcgacg 14782305 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 60 tcccaccacctcctcctcccgctcctcc 87 ||||||| |||||||||||| ||||||| Sbjct: 14643747 tcccacctcctcctcctccctctcctcc 14643774 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ctcccaccacctcctcctcc 78 |||||||||||||||||||| Sbjct: 13505994 ctcccaccacctcctcctcc 13506013 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctgccgcctccgccttcgcc 116 |||||||||||||||||||| Sbjct: 8979738 ctgccgcctccgccttcgcc 8979719 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctgccgcctccgccttcgcc 116 |||||||||||||||||||| Sbjct: 2823290 ctgccgcctccgccttcgcc 2823271
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 47 cgccatggcgatctcccaccacctcctcctcccgctcctcctc 89 ||||||||| ||| ||||||||||||||||| ||||||||| Sbjct: 6545926 cgccatggccatccaccaccacctcctcctcctcctcctcctc 6545884 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 ctcccaccacctcctcctccc 79 ||||||||||||||||||||| Sbjct: 5894186 ctcccaccacctcctcctccc 5894166 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgc 81 |||||||||||||||||||| Sbjct: 2115298 ccaccacctcctcctcccgc 2115317
>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0690H04 Length = 137319 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 47 cgccatggcgatctcccaccacctcctcctcccgctcctcctc 89 ||||||||| ||| ||||||||||||||||| ||||||||| Sbjct: 62302 cgccatggccatccaccaccacctcctcctcctcctcctcctc 62260
>dbj|AP006562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1175F05 Length = 126842 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctcgcg 92 ||||||||||||||||| |||||||| |||| Sbjct: 114706 ccaccacctcctcctccggctcctccacgcg 114676 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ctcccaccacctcctcctcc 78 |||||||||||||||||||| Sbjct: 80922 ctcccaccacctcctcctcc 80941
>dbj|AK072885.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149P08, full insert sequence Length = 1502 Score = 46.1 bits (23), Expect = 0.11 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 69 ctcctcctcccgctcctcctcgcg-gcggctgccg 102 ||||||||||| |||||||||||| |||||||||| Sbjct: 36 ctcctcctccctctcctcctcgcgcgcggctgccg 70
>dbj|AK073401.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044P20, full insert sequence Length = 2843 Score = 46.1 bits (23), Expect = 0.11 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 69 ctcctcctcccgctcctcctcgcg-gcggctgccg 102 ||||||||||| |||||||||||| |||||||||| Sbjct: 142 ctcctcctccctctcctcctcgcgcgcggctgccg 176
>dbj|AK071572.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105E11, full insert sequence Length = 1577 Score = 46.1 bits (23), Expect = 0.11 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 69 ctcctcctcccgctcctcctcgcg-gcggctgccg 102 ||||||||||| |||||||||||| |||||||||| Sbjct: 29 ctcctcctccctctcctcctcgcgcgcggctgccg 63
>ref|NM_210013.1| Eremothecium gossypii AEL201Wp (AEL201W), mRNA Length = 1725 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 63 caccacctcctcctcccgctcctcctc 89 |||||||||||| |||||||||||||| Sbjct: 186 caccacctcctcttcccgctcctcctc 160
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.11 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 69 ctcctcctcccgctcctcctcgcg-gcggctgccg 102 ||||||||||| |||||||||||| |||||||||| Sbjct: 2601486 ctcctcctccctctcctcctcgcgcgcggctgccg 2601520 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 68 cctcctcctcccgctcctcctcgcggcggc 97 ||||||||||| ||||||||||||||||| Sbjct: 16701618 cctcctcctcctcctcctcctcgcggcggc 16701589 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 ctgccgcctccgccttcgcc 116 |||||||||||||||||||| Sbjct: 18397257 ctgccgcctccgccttcgcc 18397276
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 46.1 bits (23), Expect = 0.11 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Minus Query: 69 ctcctcctcccgctcctcctcgcg-gcggctgccg 102 ||||||||||| |||||||||||| |||||||||| Sbjct: 66467 ctcctcctccctctcctcctcgcgcgcggctgccg 66433
>emb|AL669851.8| Mouse DNA sequence from clone RP23-18K13 on chromosome X, complete sequence Length = 204557 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 81 ctcctcctcgcggcggctgccgcctccgcct 111 ||||||||||| ||||| ||||||||||||| Sbjct: 27353 ctcctcctcgctgcggccgccgcctccgcct 27323
>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence Length = 199737 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 68 cctcctcctcccgctcctcctc 89 |||||||||||||||||||||| Sbjct: 179304 cctcctcctcccgctcctcctc 179325 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 68 cctcctcctcccgctcctcctc 89 |||||||||||||||||||||| Sbjct: 179226 cctcctcctcccgctcctcctc 179247 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 68 cctcctcctcccgctcctcctc 89 |||||||||||||||||||||| Sbjct: 178222 cctcctcctcccgctcctcctc 178243 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ctcctcctcccgctcctcctc 89 ||||||||||||||||||||| Sbjct: 179212 ctcctcctcccgctcctcctc 179232
>gb|AF061032.1| Homo sapiens cosmid 223D9 from Xq28, complete sequence Length = 37581 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 69 ctcctcctcccgctcctcctcg 90 |||||||||||||||||||||| Sbjct: 6500 ctcctcctcccgctcctcctcg 6479
>ref|XM_324065.1| Neurospora crassa OR74A predicted protein (NCU04709.1) partial mRNA Length = 384 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 cctcctcctcccgctcctcctc 89 |||||||||||||||||||||| Sbjct: 76 cctcctcctcccgctcctcctc 55
>ref|XM_955147.1| Neurospora crassa OR74A hypothetical protein (NCU04709.1) partial mRNA Length = 384 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 cctcctcctcccgctcctcctc 89 |||||||||||||||||||||| Sbjct: 76 cctcctcctcccgctcctcctc 55
>gb|AC149575.1| Populus trichocarpa clone Pop1-41G18, complete sequence Length = 111678 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcc 87 |||||||||||||||||| ||||||| Sbjct: 34803 ccaccacctcctcctccccctcctcc 34828 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ctcccaccacctcctcctcc 78 |||||||||||||||||||| Sbjct: 32544 ctcccaccacctcctcctcc 32525
>gb|AC011309.5| Homo sapiens BAC clone CTD-2503O24 from 7, complete sequence Length = 112863 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 cctcctcctcccgctcctcctc 89 |||||||||||||||||||||| Sbjct: 51143 cctcctcctcccgctcctcctc 51122
>emb|CT025632.2| Pan troglodytes chromosome X clone PTB-029A18 map Xq28, complete sequence Length = 144091 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 69 ctcctcctcccgctcctcctcg 90 |||||||||||||||||||||| Sbjct: 122126 ctcctcctcccgctcctcctcg 122105
>ref|XM_850331.1| PREDICTED: Canis familiaris similar to Collagen alpha 1(III) chain precursor (LOC612598), mRNA Length = 1590 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 cctcctcctcccgctcctcctc 89 |||||||||||||||||||||| Sbjct: 484 cctcctcctcccgctcctcctc 463 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ctcctcctcccgctcctcctc 89 ||||||||||||||||||||| Sbjct: 585 ctcctcctcccgctcctcctc 565 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ctcctcctcccgctcctcctc 89 ||||||||||||||||||||| Sbjct: 453 ctcctcctcccgctcctcctc 433
>gb|AY358837.1| Homo sapiens clone DNA96877 CD99L2 (UNQ1964) mRNA, complete cds Length = 3597 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 ctcctcctcccgctcctcctcg 90 |||||||||||||||||||||| Sbjct: 16 ctcctcctcccgctcctcctcg 37
>gb|AC145918.3| Pan troglodytes BAC clone RP43-9J6 from 7, complete sequence Length = 214272 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 cctcctcctcccgctcctcctc 89 |||||||||||||||||||||| Sbjct: 164591 cctcctcctcccgctcctcctc 164570
>gb|BC030536.1| Homo sapiens CD99 molecule-like 2, transcript variant 1, mRNA (cDNA clone MGC:40250 IMAGE:5242536), complete cds Length = 3572 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 ctcctcctcccgctcctcctcg 90 |||||||||||||||||||||| Sbjct: 3 ctcctcctcccgctcctcctcg 24
>gb|AC090122.26| Mus musculus strain C57BL/6J clone rp23-28a7 map 7, complete sequence Length = 212485 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 68 cctcctcctcccgctcctcctc 89 |||||||||||||||||||||| Sbjct: 174779 cctcctcctcccgctcctcctc 174800
>emb|AL355386.9| Human DNA sequence from clone RP5-1090M5 on chromosome 1p34.1-34.3 Contains the 5' end of the GRIK3 gene for glutamate receptor ionotropic kainate 3 and a CpG island, complete sequence Length = 133240 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 68 cctcctcctcccgctcctcctc 89 |||||||||||||||||||||| Sbjct: 108100 cctcctcctcccgctcctcctc 108121
>emb|Z49091.1|SPACT1MR S.oleracea act1 mRNA for glycerol-3-phosphate acyltransferase Length = 2411 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 234 tccgtcctcgtcttcttcgacg 255 |||||||||||||||||||||| Sbjct: 268 tccgtcctcgtcttcttcgacg 289
>emb|Y08638.1|GGTFAC G.gallus mRNA for nuclear orphan receptor ROR-beta Length = 2032 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 89 cgcggcggctgccgcctccgcc 110 |||||||||||||||||||||| Sbjct: 221 cgcggcggctgccgcctccgcc 242
>emb|X77370.1|SOGAT S.oleracea GAT mRNA for glycerol-3-phosphate O-acyltransferase Length = 1656 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 234 tccgtcctcgtcttcttcgacg 255 |||||||||||||||||||||| Sbjct: 255 tccgtcctcgtcttcttcgacg 276
>ref|NM_031462.2| Homo sapiens CD99 molecule-like 2 (CD99L2), transcript variant 1, mRNA Length = 3635 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 ctcctcctcccgctcctcctcg 90 |||||||||||||||||||||| Sbjct: 33 ctcctcctcccgctcctcctcg 54
>ref|NM_134446.2| Homo sapiens CD99 molecule-like 2 (CD99L2), transcript variant 2, mRNA Length = 3488 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 ctcctcctcccgctcctcctcg 90 |||||||||||||||||||||| Sbjct: 33 ctcctcctcccgctcctcctcg 54
>ref|NM_134445.2| Homo sapiens CD99 molecule-like 2 (CD99L2), transcript variant 3, mRNA Length = 3419 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 ctcctcctcccgctcctcctcg 90 |||||||||||||||||||||| Sbjct: 33 ctcctcctcccgctcctcctcg 54
>ref|NM_205093.1| Gallus gallus RAR-related orphan receptor B (RORB), mRNA Length = 2032 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 89 cgcggcggctgccgcctccgcc 110 |||||||||||||||||||||| Sbjct: 221 cgcggcggctgccgcctccgcc 242
>emb|AL136580.1|HSM801554 Homo sapiens mRNA; cDNA DKFZp761H2024 (from clone DKFZp761H2024) Length = 3651 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 ctcctcctcccgctcctcctcg 90 |||||||||||||||||||||| Sbjct: 33 ctcctcctcccgctcctcctcg 54
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 290 cccccagctccgccgcgagttcgcgc 315 |||||||||| ||||||||||||||| Sbjct: 1650385 cccccagctcagccgcgagttcgcgc 1650410
>gb|AC093530.2| Homo sapiens chromosome 5 clone RP11-401N6, complete sequence Length = 115015 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 cctcctcctcccgctcctcctc 89 |||||||||||||||||||||| Sbjct: 107225 cctcctcctcccgctcctcctc 107204
>gb|AC099554.2| Homo sapiens chromosome 5 clone RP11-61G23, complete sequence Length = 164920 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 68 cctcctcctcccgctcctcctc 89 |||||||||||||||||||||| Sbjct: 147780 cctcctcctcccgctcctcctc 147801
>gb|AF274573.4| Homo sapiens chromosome X clone RP11-316K19, RP11-316M19, RP4-687A5 map q28, complete sequence Length = 189436 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 69 ctcctcctcccgctcctcctcg 90 |||||||||||||||||||||| Sbjct: 143083 ctcctcctcccgctcctcctcg 143062
>gb|AC090652.32| Mus musculus strain C57BL/6J chromosome 7 clone rp23-116a10, complete sequence Length = 228147 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 cctcctcctcccgctcctcctc 89 |||||||||||||||||||||| Sbjct: 215547 cctcctcctcccgctcctcctc 215526
>emb|Z35481.1|CCOCP2 C.cobaya (NIH) ocp-2 mRNA Length = 1281 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 68 cctcctcctcccgctcctcctc 89 |||||||||||||||||||||| Sbjct: 38 cctcctcctcccgctcctcctc 59
>emb|AL355096.4|CNS05TCF Human chromosome 14 DNA sequence BAC R-168L7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 189389 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 278 cgacctccacctcccccagctc 299 |||||||||||||||||||||| Sbjct: 111903 cgacctccacctcccccagctc 111882
>emb|AL683884.26| Mouse DNA sequence from clone RP23-117B19 on chromosome 4, complete sequence Length = 227816 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 cctcctcctcccgctcctcctc 89 |||||||||||||||||||||| Sbjct: 164177 cctcctcctcccgctcctcctc 164156
>emb|AL935068.5|CNS08CCK Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0088J13 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 116974 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 68 cctcctcctcccgctcctcctcgcggcggc 97 ||||||||||| ||||||||||||||||| Sbjct: 37016 cctcctcctcctcctcctcctcgcggcggc 37045
>emb|AL591884.11| Mouse DNA sequence from clone RP23-183N8 on chromosome 2, complete sequence Length = 204495 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 68 cctcctcctcccgctcctcctc 89 |||||||||||||||||||||| Sbjct: 151760 cctcctcctcccgctcctcctc 151781
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 290 cccccagctccgccgcgagttcgcgc 315 |||||||||| ||||||||||||||| Sbjct: 2666401 cccccagctcagccgcgagttcgcgc 2666376
>dbj|D29968.1|SYODNAK3 Synechococcus sp. dnaK3 gene for heat shock protein HSP70, complete cds Length = 3463 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 290 cccccagctccgccgcgagttcgcgc 315 |||||||||| ||||||||||||||| Sbjct: 925 cccccagctcagccgcgagttcgcgc 950
>ref|XM_511552.1| PREDICTED: Pan troglodytes similar to FZD2 protein (LOC454731), mRNA Length = 2169 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 cctcctcgcggcggctgccgcctcc 107 ||||||||| ||||||||||||||| Sbjct: 521 cctcctcgctgcggctgccgcctcc 497
>ref|XM_633468.1| Dictyostelium discoideum hypothetical protein (DDB0218619), partial mRNA Length = 4788 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 ccacctcctcctcccgctcctcctc 89 ||||||||||||||| ||||||||| Sbjct: 965 ccacctcctcctccccctcctcctc 941
>ref|XM_493808.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 279 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 99 gccgcctccgccttcgccggcgcca 123 ||||||||||||||||||| ||||| Sbjct: 243 gccgcctccgccttcgccgccgcca 219
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 ctcccgctccccctcgggggt 175 ||||||||||||||||||||| Sbjct: 3137158 ctcccgctccccctcgggggt 3137178
>ref|XM_479686.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2076 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 tcccacttctcccgcctcgcc 512 ||||||||||||||||||||| Sbjct: 634 tcccacttctcccgcctcgcc 654
>ref|XM_507085.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1300_E01.9 mRNA Length = 2152 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 tcccacttctcccgcctcgcc 512 ||||||||||||||||||||| Sbjct: 651 tcccacttctcccgcctcgcc 671
>ref|NM_197667.1| Oryza sativa (japonica cultivar-group) putative Scl1 protein (OSJNBa0015J15.19), mRNA Length = 1749 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 61 cccaccacctcctcctcccgctcctcctcgcggcggc 97 |||||||||||||||||||| ||| | || ||||||| Sbjct: 195 cccaccacctcctcctcccgttccccatcccggcggc 159
>ref|NM_192459.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 825 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 tccctccgctcccgctccccc 167 ||||||||||||||||||||| Sbjct: 174 tccctccgctcccgctccccc 194
>ref|NM_192788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1842 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 tcctcccgctcctcctcgcggcggc 97 |||||||||||||||||||| |||| Sbjct: 1313 tcctcccgctcctcctcgcgtcggc 1337
>ref|NM_193507.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 648 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 80 gctcctcctcgcggcggctgccgcc 104 |||||||||||| |||||||||||| Sbjct: 18 gctcctcctcgccgcggctgccgcc 42
>ref|XM_469472.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1882 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 63 caccacctcctcctcccgctcctcc 87 ||||||||||||||||| ||||||| Sbjct: 416 caccacctcctcctccccctcctcc 392
>ref|XM_478758.1| Oryza sativa (japonica cultivar-group), mRNA Length = 951 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctc 86 |||||||||||||||||| |||||| Sbjct: 139 ccaccacctcctcctccctctcctc 115
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 cccaccacctcctcctcccgc 81 ||||||||||||||||||||| Sbjct: 1192062 cccaccacctcctcctcccgc 1192082
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 cctcctcctcccgctcctcctcgcg 92 |||||||||| |||||||||||||| Sbjct: 1740824 cctcctcctcgcgctcctcctcgcg 1740848
>gb|AC130730.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0681D04, complete sequence Length = 163670 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 cctcctcccgctcctcctcgcggcg 95 ||||||||||||||||| ||||||| Sbjct: 138969 cctcctcccgctcctccgcgcggcg 138945
>ref|NM_005221.5| Homo sapiens distal-less homeobox 5 (DLX5), mRNA Length = 1424 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 81 ctcctcctcgcggcggctgccgcctccgccttc 113 ||||||||||| ||||| ||||||||| ||||| Sbjct: 43 ctcctcctcgccgcggccgccgcctcctccttc 75
>gb|AC132486.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0473H02, complete sequence Length = 141027 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 cctcctcccgctcctcctcgcggcg 95 ||||||||||||||||| ||||||| Sbjct: 37379 cctcctcccgctcctccgcgcggcg 37355
>ref|NM_001466.2| Homo sapiens frizzled homolog 2 (Drosophila) (FZD2), mRNA Length = 1983 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 cctcctcgcggcggctgccgcctcc 107 ||||||||| ||||||||||||||| Sbjct: 50 cctcctcgctgcggctgccgcctcc 26
>gb|AC103703.5| Homo sapiens chromosome 17, clone RP11-764D10, complete sequence Length = 144240 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 cctcctcgcggcggctgccgcctcc 107 ||||||||| ||||||||||||||| Sbjct: 32465 cctcctcgctgcggctgccgcctcc 32489
>gb|AY523351.1| Drosophila simulans strain CS8 genomic sequence Length = 956 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 cctcctcccgctcctcctcgcggcg 95 |||||| |||||||||||||||||| Sbjct: 162 cctccttccgctcctcctcgcggcg 186
>gb|AY523350.1| Drosophila simulans strain CS7 genomic sequence Length = 956 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 cctcctcccgctcctcctcgcggcg 95 |||||| |||||||||||||||||| Sbjct: 162 cctccttccgctcctcctcgcggcg 186
>gb|AY523349.1| Drosophila simulans strain CS6 genomic sequence Length = 956 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 cctcctcccgctcctcctcgcggcg 95 |||||| |||||||||||||||||| Sbjct: 162 cctccttccgctcctcctcgcggcg 186
>gb|AY523348.1| Drosophila simulans strain CS5 genomic sequence Length = 956 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 cctcctcccgctcctcctcgcggcg 95 |||||| |||||||||||||||||| Sbjct: 162 cctccttccgctcctcctcgcggcg 186
>gb|AY523347.1| Drosophila simulans strain CS4 genomic sequence Length = 956 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 cctcctcccgctcctcctcgcggcg 95 |||||| |||||||||||||||||| Sbjct: 162 cctccttccgctcctcctcgcggcg 186
>gb|AY523346.1| Drosophila simulans strain CS3 genomic sequence Length = 956 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 cctcctcccgctcctcctcgcggcg 95 |||||| |||||||||||||||||| Sbjct: 162 cctccttccgctcctcctcgcggcg 186
>gb|AY523345.1| Drosophila simulans strain CS2 genomic sequence Length = 956 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 cctcctcccgctcctcctcgcggcg 95 |||||| |||||||||||||||||| Sbjct: 162 cctccttccgctcctcctcgcggcg 186
>gb|AY523344.1| Drosophila simulans strain CS1 genomic sequence Length = 956 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 cctcctcccgctcctcctcgcggcg 95 |||||| |||||||||||||||||| Sbjct: 162 cctccttccgctcctcctcgcggcg 186
>gb|AC004774.1| Homo sapiens BAC clone CTA-300E22 from 7, complete sequence Length = 161652 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 81 ctcctcctcgcggcggctgccgcctccgccttc 113 ||||||||||| ||||| ||||||||| ||||| Sbjct: 130682 ctcctcctcgccgcggccgccgcctcctccttc 130650
>gb|AC134832.5| Mus musculus BAC clone RP24-561D12 from chromosome 7, complete sequence Length = 158123 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcctcctcccgctcctcctcg 90 ||||||||||||||||||||| Sbjct: 59669 tcctcctcccgctcctcctcg 59689
>gb|AC182697.2| Populus trichocarpa clone Pop1-6M9, complete sequence Length = 58709 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 61 cccaccacctcctcctcccgctcctcctc 89 |||||||||||||||||| ||||||||| Sbjct: 23834 cccaccacctcctcctcctcctcctcctc 23806
>ref|XM_571082.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNE04280) partial mRNA Length = 3846 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 cccaccacctcctcctcccgc 81 ||||||||||||||||||||| Sbjct: 627 cccaccacctcctcctcccgc 647
>gb|AC122015.3| Mus musculus BAC clone RP24-358M18 from chromosome 6, complete sequence Length = 166966 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ctcctcctcccgctcctcctc 89 ||||||||||||||||||||| Sbjct: 79007 ctcctcctcccgctcctcctc 78987
>gb|AC122816.4| Mus musculus BAC clone RP23-235N10 from chromosome 6, complete sequence Length = 177967 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 ccacctcctcctcccgctcctcctc 89 ||||||||||||||| ||||||||| Sbjct: 156655 ccacctcctcctccccctcctcctc 156631 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 ccacctcctcctcccgctcctcctc 89 ||||||||||||||| ||||||||| Sbjct: 156453 ccacctcctcctccccctcctcctc 156429
>gb|AC122855.4| Mus musculus BAC clone RP23-120H20 from chromosome 14, complete sequence Length = 202424 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 cctcctcctcccgctcctcct 88 ||||||||||||||||||||| Sbjct: 125302 cctcctcctcccgctcctcct 125322
>gb|AC091152.18| Homo sapiens chromosome 17, clone RP11-1072C15, complete sequence Length = 181835 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 cctcctcgcggcggctgccgcctcc 107 ||||||||| ||||||||||||||| Sbjct: 8721 cctcctcgctgcggctgccgcctcc 8697
>ref|XM_810065.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053508293.80) partial mRNA Length = 1044 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 cctcctcctcccgctcctcct 88 ||||||||||||||||||||| Sbjct: 574 cctcctcctcccgctcctcct 594
>ref|XM_810696.1| Trypanosoma cruzi strain CL Brener cell division cycle protein 45 (CDC45) (Tc00.1047053506303.20) partial mRNA Length = 2049 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 tcctcctcccgctcctcctcg 90 ||||||||||||||||||||| Sbjct: 572 tcctcctcccgctcctcctcg 552
>ref|XM_814443.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053510625.150) partial mRNA Length = 912 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 cctcctcctcccgctcctcct 88 ||||||||||||||||||||| Sbjct: 439 cctcctcctcccgctcctcct 459
>ref|XM_800225.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053510461.30) partial mRNA Length = 651 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 cctcctcctcccgctcctcct 88 ||||||||||||||||||||| Sbjct: 574 cctcctcctcccgctcctcct 594
>gb|BC003747.1| Mus musculus troponin T3, skeletal, fast, mRNA (cDNA clone MGC:5854 IMAGE:3594256), complete cds Length = 1101 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 tcctcctcccgctcctcctcg 90 ||||||||||||||||||||| Sbjct: 218 tcctcctcccgctcctcctcg 198
>emb|AL592301.14| Human DNA sequence from clone RP11-413M3 on chromosome 9 Contains the 3' end of the gene for activator of G-protein signalling 3 (AGS3), two novel genes, the CARD9 gene for caspase recruitment domain family member 9, the SNAPC4 gene for a 190kDa small nuclear RNA activating complex polypeptide 4, the SDCCAG3 gene for serologically defined colon cancer antigen 3, the INPP5E gene for a 72kDa inositol polyphosphate-5-phosphatase, the gene for phosphatidylinositol polyphosphate 5-phosphatase type IV (PPI5PIV), a novel gene (KIAA0310), the 3' end of the NOTCH1 gene for Notch homolog 1 translocation-associated (Drosophila) and twenty CpG islands, complete sequence Length = 188462 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ccacctcctcctcccgctcctcctc 89 ||||||||||||||| ||||||||| Sbjct: 163698 ccacctcctcctccccctcctcctc 163722
>gb|AC098563.6| Rattus norvegicus 1 BAC CH230-123A15 (Children's Hospital Oakland Research Institute) complete sequence Length = 250414 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcctcctcccgctcctcctcg 90 ||||||||||||||||||||| Sbjct: 221432 tcctcctcccgctcctcctcg 221452
>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07, complete sequence Length = 87592 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 gccgcctccgccttcgccggcgcca 123 ||||||||||||||||||| ||||| Sbjct: 28795 gccgcctccgccttcgccgccgcca 28819
>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09, complete sequence Length = 146568 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 ccacctcctcctcccgctcctcctc 89 ||||||||||||||| ||||||||| Sbjct: 124798 ccacctcctcctccccctcctcctc 124774
>gb|AC154683.2| Mus musculus BAC clone RP23-142O4 from chromosome 14, complete sequence Length = 219067 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 ccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||| Sbjct: 17834 ccacctcctcctcccgcgcctcctc 17810
>gb|AC083984.7| Homo sapiens chromosome 11, clone RP11-401C19, complete sequence Length = 117149 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ctcctcctcccgctcctcctc 89 ||||||||||||||||||||| Sbjct: 23983 ctcctcctcccgctcctcctc 23963
>emb|BX927082.9| Zebrafish DNA sequence from clone DKEY-182O15 in linkage group 13, complete sequence Length = 157140 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 cagcactcctactcccagttc 413 ||||||||||||||||||||| Sbjct: 3611 cagcactcctactcccagttc 3631
>gb|BC036881.1| Homo sapiens, clone IMAGE:5242858, mRNA Length = 1841 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 cctcctcgcggcggctgccgcctcc 107 ||||||||| ||||||||||||||| Sbjct: 1793 cctcctcgctgcggctgccgcctcc 1817
>gb|BC074568.1| Xenopus tropicalis MGC69517 protein, mRNA (cDNA clone MGC:69517 IMAGE:5336497), complete cds Length = 1842 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 ccacctcctcctcccgctcctcctc 89 |||||||||||||| |||||||||| Sbjct: 1257 ccacctcctcctcctgctcctcctc 1233
>emb|CR450827.5| Zebrafish DNA sequence from clone CH211-112G6 in linkage group 13, complete sequence Length = 174505 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 cagcactcctactcccagttc 413 ||||||||||||||||||||| Sbjct: 166006 cagcactcctactcccagttc 166026
>emb|CR456682.4| Zebrafish DNA sequence from clone CH211-32G19 in linkage group 13, complete sequence Length = 193213 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 cagcactcctactcccagttc 413 ||||||||||||||||||||| Sbjct: 48257 cagcactcctactcccagttc 48237
>tpg|BK000731.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M117, complete sequence Length = 997 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 55 cgatctcccaccacctcctcctcccgctcctcc 87 ||||||||| || |||||||||||| ||||||| Sbjct: 541 cgatctccctcctcctcctcctccccctcctcc 509
>dbj|AK023493.1| Homo sapiens cDNA FLJ13431 fis, clone PLACE1002532, highly similar to HOMEOBOX PROTEIN DLX-5 Length = 1415 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 81 ctcctcctcgcggcggctgccgcctccgccttc 113 ||||||||||| ||||| ||||||||| ||||| Sbjct: 43 ctcctcctcgccgcggccgccgcctcctccttc 75
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete sequence Length = 144798 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 61 cccaccacctcctcctcccgctcctcctcgcggcggc 97 |||||||||||||||||||| ||| | || ||||||| Sbjct: 87620 cccaccacctcctcctcccgttccccatcccggcggc 87584
>gb|L49471.1|MUSFE4E17 Mus musculus troponin T fast skeletal muscle isoform FA4e17 (Tnnt3) mRNA, complete cds Length = 1049 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 tcctcctcccgctcctcctcg 90 ||||||||||||||||||||| Sbjct: 192 tcctcctcccgctcctcctcg 172
>gb|L49466.1|MUSFE2E17 Mus musculus troponin T fast skeletal muscle isoform FE2e17 (Tnnt3) mRNA, complete cds Length = 1067 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 tcctcctcccgctcctcctcg 90 ||||||||||||||||||||| Sbjct: 210 tcctcctcccgctcctcctcg 190
>gb|M15202.1|RATTNT Rattus norvegicus troponin T class proteins, alternatively spliced products, complete cds Length = 17249 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 tcctcctcccgctcctcctcg 90 ||||||||||||||||||||| Sbjct: 9173 tcctcctcccgctcctcctcg 9153
>gb|AC015988.10| Homo sapiens, clone RP11-153F20, complete sequence Length = 150113 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 ccacctcctcctcccgctcctcctc 89 ||||||||||||||| ||||||||| Sbjct: 38613 ccacctcctcctccccctcctcctc 38589
>gb|AC092041.2| Homo sapiens chromosome 3 clone RP11-132K4, complete sequence Length = 171461 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ccacctcctcctcccgctcctcctc 89 ||||||||||||||| ||||||||| Sbjct: 49154 ccacctcctcctccccctcctcctc 49178
>gb|AF333761.1|AF333761 Rhodococcus ruber putative two-component system regulatory protein, partial cds; putative integral membrane protein and putative sodium:solute symporter, EthR (ethR), EthA (ethA), EthB (ethB), EthC (ethC), EthD (ethD), complete cds; class II transposon insertion sequence IS3 transposase (tnpX) and transposase TnpA (tnpA) genes, complete cds; putative membrane protein gene, partial cds; and unknown genes Length = 23656 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 cccctactccgtcctcgtctt 247 ||||||||||||||||||||| Sbjct: 16980 cccctactccgtcctcgtctt 17000
>gb|L49468.1| Mus musculus troponin T fast skeletal muscle isoform FA3e17 (Tnnt3) mRNA, complete cds Length = 1052 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 tcctcctcccgctcctcctcg 90 ||||||||||||||||||||| Sbjct: 195 tcctcctcccgctcctcctcg 175
>gb|L49467.1| Mus musculus troponin T fast skeletal muscle isoform FA1e17 (Tnnt3) mRNA, complete cds Length = 1079 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 tcctcctcccgctcctcctcg 90 ||||||||||||||||||||| Sbjct: 222 tcctcctcccgctcctcctcg 202
>gb|DP000042.1| Lemur catta target 106 genomic scaffold Length = 452647 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ccacctcctcctcccgctcctcctc 89 |||||||||| |||||||||||||| Sbjct: 97088 ccacctcctcttcccgctcctcctc 97112
>gb|L49469.1|MUSFE3ENGV Mus musculus troponin T fast skeletal muscle isoform (Tnnt3) mRNA, partial cds Length = 1011 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 tcctcctcccgctcctcctcg 90 ||||||||||||||||||||| Sbjct: 195 tcctcctcccgctcctcctcg 175
>gb|BC052266.1| Homo sapiens frizzled homolog 2 (Drosophila), mRNA (cDNA clone IMAGE:6578442), partial cds Length = 2048 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 cctcctcgcggcggctgccgcctcc 107 ||||||||| ||||||||||||||| Sbjct: 148 cctcctcgctgcggctgccgcctcc 124
>gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genomic sequence, complete sequence Length = 122497 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 63 caccacctcctcctcccgctcctcc 87 ||||||||||||||||| ||||||| Sbjct: 27302 caccacctcctcctccccctcctcc 27278
>gb|S68786.1| troponin T {alternatively spliced, exon y} [rats, Wistar, neonatal hind-leg fast skeletal muscle, Genomic, 81 nt] Length = 81 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 tcctcctcccgctcctcctcg 90 ||||||||||||||||||||| Sbjct: 64 tcctcctcccgctcctcctcg 44
>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07, complete sequence Length = 127098 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 gccgcctccgccttcgccggcgcca 123 ||||||||||||||||||| ||||| Sbjct: 100910 gccgcctccgccttcgccgccgcca 100934
>dbj|AK051032.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030057J08 product:Zic family member 2 (odd-paired homolog, Drosophila), full insert sequence Length = 2617 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||| Sbjct: 40 ccacctcctcctcccgcgcctcctc 64
>emb|CR377979.1| Pinus pinaster SSR, clone PPB3E09 Length = 624 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ccacctcctcctcccgctcctcctc 89 ||||||||||||||| ||||||||| Sbjct: 369 ccacctcctcctccccctcctcctc 393
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 55 cgatctcccaccacctcctcctcccgctcctcc 87 ||||||||| || |||||||||||| ||||||| Sbjct: 19656939 cgatctccctcctcctcctcctccccctcctcc 19656907 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 cctcctcctcccgctcctcctcgc 91 |||||||||||| ||||||||||| Sbjct: 35113545 cctcctcctccccctcctcctcgc 35113522 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 cctcctcctcccgctcctcctcgc 91 ||||||||||||||| |||||||| Sbjct: 19325019 cctcctcctcccgctgctcctcgc 19324996 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctgccgcctccgccttcgcc 116 |||||||||||||||||||| Sbjct: 16916318 ctgccgcctccgccttcgcc 16916299 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 cgtcctcgtcttcttcgacg 255 |||||||||||||||||||| Sbjct: 10755229 cgtcctcgtcttcttcgacg 10755210 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctgccgcctccgccttcgcc 116 |||||||||||||||||||| Sbjct: 6320351 ctgccgcctccgccttcgcc 6320332 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 78 ccgctcctcctcgcggcggctgccgcctccgc 109 |||||||||| ||||| |||||||||||||| Sbjct: 1295258 ccgctcctccgagcggctgctgccgcctccgc 1295289
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 61 cccaccacctcctcctcccgctcctcctcgcggcggc 97 |||||||||||||||||||| ||| | || ||||||| Sbjct: 21118086 cccaccacctcctcctcccgttccccatcccggcggc 21118122 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctgccgcctccgccttcgcc 116 |||||||||||||||||||| Sbjct: 12899571 ctgccgcctccgccttcgcc 12899552 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctgccgcctccgccttcgcc 116 |||||||||||||||||||| Sbjct: 10846920 ctgccgcctccgccttcgcc 10846901
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 tcccacttctcccgcctcgcc 512 ||||||||||||||||||||| Sbjct: 274351 tcccacttctcccgcctcgcc 274331 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cctcctcccgctcctcctcg 90 |||||||||||||||||||| Sbjct: 24709088 cctcctcccgctcctcctcg 24709107 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 cgtcctcgtcttcttcgacg 255 |||||||||||||||||||| Sbjct: 13352629 cgtcctcgtcttcttcgacg 13352610 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 ctgccgcctccgccttcgcc 116 |||||||||||||||||||| Sbjct: 9868686 ctgccgcctccgccttcgcc 9868705
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctc 86 |||||||||||||||||| |||||| Sbjct: 22837075 ccaccacctcctcctccctctcctc 22837099 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 ctgccgcctccgccttcgcc 116 |||||||||||||||||||| Sbjct: 7601397 ctgccgcctccgccttcgcc 7601416 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||| |||||| ||||||||| Sbjct: 7172811 ccaccacctccccctccccctcctcctc 7172838
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 cctcctcccgctcctcctcgcggcg 95 ||||||||||||||||| ||||||| Sbjct: 5715005 cctcctcccgctcctccgcgcggcg 5714981 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 gccgcctccgccttcgccggcgcc 122 ||||||||||||||||||| |||| Sbjct: 28553591 gccgcctccgccttcgccgccgcc 28553568 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctgccgcctccgccttcgcc 116 |||||||||||||||||||| Sbjct: 8226842 ctgccgcctccgccttcgcc 8226823
>gb|AC010578.5|AC010578 Drosophila melanogaster, chromosome 2R, region 51B-51C, BAC clone BACR03K23, complete sequence Length = 160346 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 61 cccaccacctcctcctcccgctcctcctc 89 |||||| |||||||||||| ||||||||| Sbjct: 60261 cccaccgcctcctcctccccctcctcctc 60289
>ref|NM_001004806.1| Xenopus tropicalis MGC69517 protein (MGC69517), mRNA Length = 1842 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 ccacctcctcctcccgctcctcctc 89 |||||||||||||| |||||||||| Sbjct: 1257 ccacctcctcctcctgctcctcctc 1233
>gb|AC121344.5| Homo sapiens X BAC RP11-408N23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 111500 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ctccccagatctacatccacc 43 ||||||||||||||||||||| Sbjct: 49165 ctccccagatctacatccacc 49185
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 gctcctcctcgcggcggctgccgcc 104 |||||||||||| |||||||||||| Sbjct: 167408 gctcctcctcgccgcggctgccgcc 167384
>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0029K10, from chromosome 3, complete sequence Length = 135940 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctcg 90 ||||||||||||||||| |||||||||| Sbjct: 90512 ccaccacctcctcctcctcctcctcctcg 90484
>gb|AF263282.1|AF263282 Filobasidiella neoformans var. neoformans clone CRYP01, complete sequence Length = 109900 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 cccaccacctcctcctcccgc 81 ||||||||||||||||||||| Sbjct: 53545 cccaccacctcctcctcccgc 53525
>dbj|AP003291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684E06 Length = 147004 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 tccctccgctcccgctccccc 167 ||||||||||||||||||||| Sbjct: 48487 tccctccgctcccgctccccc 48467
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 tcctcccgctcctcctcgcggcggc 97 |||||||||||||||||||| |||| Sbjct: 151013 tcctcccgctcctcctcgcgtcggc 150989
>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0024N18 Length = 128739 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 ctcccaccacctcctcctccc 79 ||||||||||||||||||||| Sbjct: 15838 ctcccaccacctcctcctccc 15818
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 ctcccaccacctcctcctccc 79 ||||||||||||||||||||| Sbjct: 94961 ctcccaccacctcctcctccc 94941
>dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1019_E02 Length = 121607 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctc 86 |||||||||||||||||| |||||| Sbjct: 30342 ccaccacctcctcctccctctcctc 30366
>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1300_E01 Length = 103022 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 tcccacttctcccgcctcgcc 512 ||||||||||||||||||||| Sbjct: 40777 tcccacttctcccgcctcgcc 40757
>dbj|AK120587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013145A09, full insert sequence Length = 1618 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctcg 90 ||||||||||||||||| |||||||||| Sbjct: 287 ccaccacctcctcctcctcctcctcctcg 259
>dbj|AK120160.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030P03, full insert sequence Length = 1528 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctc 86 |||||||||||||||||| |||||| Sbjct: 287 ccaccacctcctcctccctctcctc 263
>ref|XM_320264.2| Anopheles gambiae str. PEST ENSANGP00000016515 (ENSANGG00000014026), partial mRNA Length = 1551 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 ccacctcctcctcccgctcct 85 ||||||||||||||||||||| Sbjct: 457 ccacctcctcctcccgctcct 437
>dbj|AK102487.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094M21, full insert sequence Length = 1544 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 cctcctcccgctcctcctcgcggcg 95 ||||||||||||||||| ||||||| Sbjct: 238 cctcctcccgctcctccgcgcggcg 262
>dbj|AK099227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091I23, full insert sequence Length = 2076 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 tcccacttctcccgcctcgcc 512 ||||||||||||||||||||| Sbjct: 634 tcccacttctcccgcctcgcc 654
>gb|AC154461.2| Mus musculus BAC clone RP24-163I13 from 14, complete sequence Length = 202273 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 cctcctcctcccgctcctcct 88 ||||||||||||||||||||| Sbjct: 101070 cctcctcctcccgctcctcct 101090
>dbj|AK073895.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074N24, full insert sequence Length = 1202 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 gccgcctccgccttcgccggcgcca 123 ||||||||||||||||||| ||||| Sbjct: 14 gccgcctccgccttcgccgccgcca 38
>dbj|AK069415.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019E02, full insert sequence Length = 2152 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 tcccacttctcccgcctcgcc 512 ||||||||||||||||||||| Sbjct: 651 tcccacttctcccgcctcgcc 671
>dbj|AK068416.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154C20, full insert sequence Length = 2904 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ccacctcctcctcccgctcctcctc 89 ||||||||||||||| ||||||||| Sbjct: 20 ccacctcctcctccccctcctcctc 44
>gb|AC144798.4| Mus musculus BAC clone RP24-364A24 from 14, complete sequence Length = 159766 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 ccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||| Sbjct: 80205 ccacctcctcctcccgcgcctcctc 80181
>gb|AC006059.3|AC006059 Homo sapiens PAC RPCI4-613B23 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 185161 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ccacctcctcctcccgctcctcctc 89 ||||||||||||||| ||||||||| Sbjct: 65703 ccacctcctcctccccctcctcctc 65727
>gb|AE003813.3| Drosophila melanogaster chromosome 2R, section 37 of 73 of the complete sequence Length = 266851 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 61 cccaccacctcctcctcccgctcctcctc 89 |||||| |||||||||||| ||||||||| Sbjct: 152604 cccaccgcctcctcctccccctcctcctc 152632
>emb|AL355102.5|CNS05TCL Human chromosome 14 DNA sequence BAC R-404P21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 201844 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 cctcctcctcccgctcctcct 88 ||||||||||||||||||||| Sbjct: 91695 cctcctcctcccgctcctcct 91675
>gb|BC006226.2| Homo sapiens distal-less homeobox 5, mRNA (cDNA clone MGC:10672 IMAGE:3941691), complete cds Length = 1419 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 81 ctcctcctcgcggcggctgccgcctccgccttc 113 ||||||||||| ||||| ||||||||| ||||| Sbjct: 29 ctcctcctcgccgcggccgccgcctcctccttc 61
>gb|U92454.1|MMU92454 Mus musculus WW domain binding protein 5 mRNA, partial cds Length = 647 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 57 atctcccaccacctcctcctcccgctcctcctc 89 |||| ||||||||||||||||| ||||||||| Sbjct: 11 atctaccaccacctcctcctcctcctcctcctc 43
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 61 cccaccacctcctcctcccgctcctcctcgcggcggc 97 |||||||||||||||||||| ||| | || ||||||| Sbjct: 21129350 cccaccacctcctcctcccgttccccatcccggcggc 21129386 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctgccgcctccgccttcgcc 116 |||||||||||||||||||| Sbjct: 12906911 ctgccgcctccgccttcgcc 12906892 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctgccgcctccgccttcgcc 116 |||||||||||||||||||| Sbjct: 10852959 ctgccgcctccgccttcgcc 10852940
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 55 cgatctcccaccacctcctcctcccgctcctcc 87 ||||||||| || |||||||||||| ||||||| Sbjct: 107665 cgatctccctcctcctcctcctccccctcctcc 107633
>gb|AC138721.4| Mus musculus BAC clone RP23-157G22 from 6, complete sequence Length = 187385 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ctcctcctcccgctcctcctc 89 ||||||||||||||||||||| Sbjct: 31561 ctcctcctcccgctcctcctc 31541
>emb|CR352249.24| Zebrafish DNA sequence from clone DKEY-97O18 in linkage group 7, complete sequence Length = 180142 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ctcctcctcccgctcctcctc 89 ||||||||||||||||||||| Sbjct: 117967 ctcctcctcccgctcctcctc 117987
>gb|L37882.1|HUMFRIZ Human frizzled gene product mRNA, complete cds Length = 1923 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 cctcctcgcggcggctgccgcctcc 107 ||||||||| ||||||||||||||| Sbjct: 50 cctcctcgctgcggctgccgcctcc 26
>gb|AC138622.4| Mus musculus BAC clone RP23-100J15 from chromosome 6, complete sequence Length = 194611 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ccacctcctcctcccgctcctcctc 89 |||||||||||||| |||||||||| Sbjct: 9992 ccacctcctcctcctgctcctcctc 10016
>gb|AC013548.13| Mus musculus chromosome 7, clone RP23-209O22, complete sequence Length = 220084 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcctcctcccgctcctcctcg 90 ||||||||||||||||||||| Sbjct: 207638 tcctcctcccgctcctcctcg 207658
>emb|AL671493.12| Mouse DNA sequence from clone RP23-105O4 on chromosome X, complete sequence Length = 220631 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 57 atctcccaccacctcctcctcccgctcctcctc 89 |||| ||||||||||||||||| ||||||||| Sbjct: 39582 atctaccaccacctcctcctcctcctcctcctc 39614
>emb|AL603651.14| Mouse DNA sequence from clone RP23-398J2 on chromosome 7, complete sequence Length = 205942 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcctcctcccgctcctcctcg 90 ||||||||||||||||||||| Sbjct: 27613 tcctcctcccgctcctcctcg 27633
>dbj|AP003183.2| Mus musculus genomic DNA, chromosome 7 clone:B229F13, complete sequences Length = 101491 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 tcctcctcccgctcctcctcg 90 ||||||||||||||||||||| Sbjct: 75867 tcctcctcccgctcctcctcg 75887
>gb|U04980.1|RNU04980 Rattus norvegicus fetal troponin T 3 (fetal TnT3) mRNA, partial cds Length = 162 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 tcctcctcccgctcctcctcg 90 ||||||||||||||||||||| Sbjct: 121 tcctcctcccgctcctcctcg 101
>gb|U04979.1|RNU04979 Rattus norvegicus fetal troponin T 2 (fetal TnT2) mRNA, partial cds Length = 177 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 tcctcctcccgctcctcctcg 90 ||||||||||||||||||||| Sbjct: 136 tcctcctcccgctcctcctcg 116
>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, clone:P0043E01 Length = 154128 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 99 gccgcctccgccttcgccggcgcca 123 ||||||||||||||||||| ||||| Sbjct: 33812 gccgcctccgccttcgccgccgcca 33836 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgc 81 |||||||||||||||||||| Sbjct: 143692 ccaccacctcctcctcccgc 143711
>gb|AC102140.15| Mus musculus chromosome 3, clone RP23-286J21, complete sequence Length = 192833 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||| ||||||||||| |||||||||| Sbjct: 85452 ccacctcctcctcctcctgctcctcctc 85425
>gb|AC113013.15| Mus musculus chromosome 7, clone RP23-174K7, complete sequence Length = 235823 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 |||||||||||||||||| |||||||| Sbjct: 115031 ccaccacctcctcctccctttcctcctc 115004
>gb|AC162384.6| Mus musculus 10 BAC RP24-292K6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 172853 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 143313 ccaccacctcctcctcctcctcctcctc 143286
>gb|AC101807.12| Mus musculus chromosome 18, clone RP24-251J22, complete sequence Length = 171409 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 22236 ccaccacctcctcctcctcctcctcctc 22263
>ref|XM_493826.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2859 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgc 81 |||||||||||||||||||| Sbjct: 270 ccaccacctcctcctcccgc 289
>ref|XM_529244.1| PREDICTED: Pan troglodytes similar to Wiskott-Aldrich syndrome protein family member 4 (LOC473870), mRNA Length = 885 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 cacctcctcctcccgctcctcctc 89 |||||||||||||| ||||||||| Sbjct: 560 cacctcctcctccccctcctcctc 583
>gb|AC125180.6| Mus musculus BAC clone RP23-322K1 from chromosome 14, complete sequence Length = 200560 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 95337 ccaccacctcctcctcctcctcctcctc 95364 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 95229 ccaccacctcctcctcctcctcctcctc 95256 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 95127 ccaccacctcctcctcctcctcctcctc 95154
>ref|XM_474763.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2274 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctgccgcctccgccttcgcc 116 |||||||||||||||||||| Sbjct: 2203 ctgccgcctccgccttcgcc 2184
>ref|XM_467569.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1160 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 68 ccaccacctcctcctcctcctcctcctc 95
>ref|XM_506949.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1124_G07.29 mRNA Length = 1257 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 68 ccaccacctcctcctcctcctcctcctc 95
>ref|XM_466427.1| Oryza sativa (japonica cultivar-group), mRNA Length = 435 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 244 ccaccacctcctcctcctcctcctcctc 217
>ref|XM_465762.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1752 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 382 ccaccacctcctcctcctcctcctcctc 409
>ref|XM_463796.1| Oryza sativa (japonica cultivar-group), mRNA Length = 711 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 240 ctcgtcttcttcgacgccacctcg 263 |||||||||||| ||||||||||| Sbjct: 118 ctcgtcttcttccacgccacctcg 95
>ref|XM_450883.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2141 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ctcccaccacctcctcctcc 78 |||||||||||||||||||| Sbjct: 199 ctcccaccacctcctcctcc 218
>ref|NM_196358.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0058B20.6), mRNA Length = 2745 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctgccgcctccgccttcgcc 116 |||||||||||||||||||| Sbjct: 2200 ctgccgcctccgccttcgcc 2181
>gb|AC122766.25| Mus musculus chromosome 3, clone RP24-111F24, complete sequence Length = 145902 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 64396 ccaccacctcctcctcctcctcctcctc 64369
>ref|NM_196061.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0073L01.22), mRNA Length = 2583 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctgccgcctccgccttcgcc 116 |||||||||||||||||||| Sbjct: 2080 ctgccgcctccgccttcgcc 2061
>ref|XM_530749.1| PREDICTED: Pan troglodytes LOC461505 (LOC461505), mRNA Length = 1423 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cctcctcctcccgctcctcc 87 |||||||||||||||||||| Sbjct: 583 cctcctcctcccgctcctcc 564
>ref|NM_186683.1| Oryza sativa (japonica cultivar-group), mRNA Length = 882 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||| |||||| ||||||||| Sbjct: 154 ccaccacctccccctccccctcctcctc 127
>ref|NM_007150.1| Homo sapiens zinc finger protein 185 (LIM domain) (ZNF185), mRNA Length = 3614 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 63 caccacctcctcctcccgctcctcctcg 90 |||||||||||||||| |||||||||| Sbjct: 121 caccacctcctcctcctcctcctcctcg 94
>ref|XM_471406.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4188 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 cgtcctcgtcttcttcgacg 255 |||||||||||||||||||| Sbjct: 2076 cgtcctcgtcttcttcgacg 2095
>ref|NM_187705.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1401 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctgccgcctccgccttcgcc 116 |||||||||||||||||||| Sbjct: 1348 ctgccgcctccgccttcgcc 1329
>gb|AC109201.12| Mus musculus chromosome 15, clone RP23-18P10, complete sequence Length = 213493 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 29639 ccaccacctcctcctcctcctcctcctc 29666
>gb|AY360386.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0017M13, complete sequence Length = 161902 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 cgtcctcgtcttcttcgacg 255 |||||||||||||||||||| Sbjct: 77104 cgtcctcgtcttcttcgacg 77085
>ref|NM_024721.2| Homo sapiens zinc finger homeodomain 4 (ZFHX4), mRNA Length = 12103 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 6045 ccaccacctcctcctcctcctcctcctc 6072
>gb|AY022921.1| Oryza sativa microsatellite MRG5246 containing (CTC)X8, closest to marker C445, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 cctcctcctcccgctcctcctcgc 91 |||||||||||| ||||||||||| Sbjct: 115 cctcctcctccccctcctcctcgc 138
>gb|AC133004.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046F10, complete sequence Length = 184041 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 ctgccgcctccgccttcgcc 116 |||||||||||||||||||| Sbjct: 33129 ctgccgcctccgccttcgcc 33148
>gb|AC146913.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0013C12 map near S6115, complete sequence Length = 123718 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 53888 ccaccacctcctcctcctcctcctcctc 53915
>gb|AC157211.7| Mus musculus chromosome 1, clone RP23-204C6, complete sequence Length = 206840 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 56025 ccaccacctcctcctcctcctcctcctc 56052
>gb|AC149084.5| Mus musculus BAC clone RP23-173A12 from chromosome 19, complete sequence Length = 188848 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 182673 ccaccacctcctcctcctcctcctcctc 182700
>gb|AY804685.1| Drosophila yakuba strain Tai18 forked (f) gene, partial cds Length = 834 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 92 ccaccacctcctcctcctcctcctcctc 65
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 ccccagctccgccgcgagtt 310 |||||||||||||||||||| Sbjct: 1998312 ccccagctccgccgcgagtt 1998331
>gb|AC108223.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019A16, complete sequence Length = 175425 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 65 ccacctcctcctcccgctcctcctcgcggcgg 96 |||||||||| | |||||||||||||||||| Sbjct: 148024 ccacctcctcgacgcgctcctcctcgcggcgg 147993
>gb|AC136645.2| Rattus norvegicus 7 BAC CH230-156H17 (Children's Hospital Oakland Research Institute) complete sequence Length = 204000 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 tcctcctcccgctcctcctc 89 |||||||||||||||||||| Sbjct: 129720 tcctcctcccgctcctcctc 129739
>gb|AC112330.5| Rattus norvegicus 15 BAC CH230-185E8 (Children's Hospital Oakland Research Institute) complete sequence Length = 158526 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 58 tctcccaccacctcctcctcccgctcctcctc 89 |||||| || |||||||||||| ||||||||| Sbjct: 107267 tctccctcctcctcctcctccccctcctcctc 107236
>ref|XM_413946.1| PREDICTED: Gallus gallus similar to RASGRF1 protein (LOC415578), mRNA Length = 4507 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 ctgccgcctccgccttcgcc 116 |||||||||||||||||||| Sbjct: 2483 ctgccgcctccgccttcgcc 2502
>gb|AC166334.8| Mus musculus chromosome 7, clone RP23-470P9, complete sequence Length = 171861 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 111246 ccaccacctcctcctcctcctcctcctc 111273
>gb|AC150558.1| Drosophila melanogaster clone BACR01N08, complete sequence Length = 174139 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 692 ccaccacctcctcctcctcctcctcctc 665
>gb|AC130279.5| Mus musculus chromosome 1, clone RP24-394G12, complete sequence Length = 207735 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 23785 ccaccacctcctcctcctcctcctcctc 23758
>gb|AC183639.2| Pan troglodytes chromosome X clone PTB-24B10 map human ortholog p11.23, complete sequence Length = 183185 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 cacctcctcctcccgctcctcctc 89 |||||||||||||| ||||||||| Sbjct: 2099 cacctcctcctccccctcctcctc 2122
>gb|AC118286.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1384_A02, complete sequence Length = 100251 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctgccgcctccgccttcgcc 116 |||||||||||||||||||| Sbjct: 23330 ctgccgcctccgccttcgcc 23311
>gb|AC134553.5| Mus musculus BAC clone RP24-280H19 from chromosome 12, complete sequence Length = 168895 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 6187 ccaccacctcctcctcctcctcctcctc 6214
>ref|XM_957623.1| Neurospora crassa OR74A hypothetical protein (NCU08046.1) partial mRNA Length = 903 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 673 ccaccacctcctcctcctcctcctcctc 646
>ref|XM_328751.1| Neurospora crassa OR74A hypothetical protein (NCU08046.1) partial mRNA Length = 903 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 673 ccaccacctcctcctcctcctcctcctc 646
>gb|AC184800.2| Pan troglodytes chromosome X clone PTB-18K16 map human ortholog p11.23, complete sequence Length = 142154 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 cacctcctcctcccgctcctcctc 89 |||||||||||||| ||||||||| Sbjct: 133294 cacctcctcctccccctcctcctc 133317
>gb|AC117693.9| Mus musculus chromosome 1, clone RP23-448D22, complete sequence Length = 193386 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 60221 ccaccacctcctcctcctcctcctcctc 60248
>gb|AC117627.16| Mus musculus chromosome 1, clone RP23-116N6, complete sequence Length = 201995 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 179262 ccaccacctcctcctcctcctcctcctc 179289
>gb|AC098571.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B10, complete sequence Length = 127304 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 gccgcctccgccttcgccggcgcc 122 ||||||||||||||||||| |||| Sbjct: 81284 gccgcctccgccttcgccgccgcc 81261
>gb|AC132293.3| Mus musculus BAC clone RP24-322H1 from chromosome 1, complete sequence Length = 158294 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 25224 ccaccacctcctcctcctcctcctcctc 25197
>gb|AC109294.8| Mus musculus chromosome 1, clone RP24-236C22, complete sequence Length = 151772 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 48246 ccaccacctcctcctcctcctcctcctc 48273
>ref|NM_001004185.2| Mus musculus WAS protein homology region 2 domain containing 1 (Whdc1), mRNA Length = 2572 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 |||||| ||||||||||| ||||||||| Sbjct: 1768 ccaccagctcctcctccccctcctcctc 1795
>gb|AC122204.3| Mus musculus BAC clone RP23-73N8 from chromosome 1, complete sequence Length = 197949 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 75283 ccaccacctcctcctcctcctcctcctc 75256
>gb|AC163402.5| Mus musculus chromosome 7, clone RP23-290H21, complete sequence Length = 240582 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 224791 ccaccacctcctcctcctcctcctcctc 224818
>gb|AC157552.10| Mus musculus chromosome 7, clone RP23-89C10, complete sequence Length = 195587 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 20683 ccaccacctcctcctcctcctcctcctc 20710
>ref|NM_017831.2| Homo sapiens ring finger protein 125 (RNF125), mRNA Length = 1916 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 ggcggctgccgcctccgcct 111 |||||||||||||||||||| Sbjct: 126 ggcggctgccgcctccgcct 145
>gb|AC091464.8| Mus musculus chromosome 14, clone RP23-97N1, complete sequence Length = 237814 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 58 tctcccaccacctcctcctcccgctcctcctc 89 |||||| || ||||||||||| |||||||||| Sbjct: 104750 tctccctcctcctcctcctcctgctcctcctc 104781
>gb|AC157659.2| Mus musculus BAC clone RP23-275J9 from chromosome 6, complete sequence Length = 210200 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 1275 ccaccacctcctcctcctcctcctcctc 1302
>gb|AC136787.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052B22, complete sequence Length = 156725 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 ctgccgcctccgccttcgcc 116 |||||||||||||||||||| Sbjct: 86346 ctgccgcctccgccttcgcc 86365
>gb|AC111128.24| Mus musculus chromosome 18, clone RP23-338I7, complete sequence Length = 209784 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 190264 ccaccacctcctcctcctcctcctcctc 190237
>gb|AC116694.9| Mus musculus chromosome 7, clone RP24-386G12, complete sequence Length = 195638 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 130725 ccaccacctcctcctcctcctcctcctc 130698
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 3442380 ccaccacctcctcctcctcctcctcctc 3442407
>gb|AC093483.6| Mus musculus chromosome 9, clone RP23-79K5, complete sequence Length = 262048 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 59687 ccaccacctcctcctcctcctcctcctc 59660
>gb|U58748.1| Caenorhabditis elegans cosmid ZK180, complete sequence Length = 37895 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ctcccaccacctcctcctcc 78 |||||||||||||||||||| Sbjct: 27934 ctcccaccacctcctcctcc 27953
>gb|AC166178.10| Mus musculus 6 BAC RP24-414G20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173015 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 |||||||||||||||||| |||||||| Sbjct: 51505 ccaccacctcctcctccccttcctcctc 51478
>gb|AC134459.4| Mus musculus BAC clone RP23-360L15 from chromosome 8, complete sequence Length = 211773 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 56787 ccaccacctcctcctcctcctcctcctc 56814
>gb|AC164634.3| Mus musculus BAC clone RP23-64E16 from chromosome 17, complete sequence Length = 204253 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 95761 ccaccacctcctcctcctcctcctcctc 95734
>gb|AC157566.6| Mus musculus chromosome 15, clone RP23-415D19, complete sequence Length = 196738 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 62921 ccaccacctcctcctcctcctcctcctc 62894
>gb|AC162901.4| Mus musculus BAC clone RP23-417K5 from chromosome 8, complete sequence Length = 205244 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 |||||||||||||||| | ||||||||| Sbjct: 169906 ccaccacctcctcctctccctcctcctc 169933
>gb|AC133945.2| Mus musculus chromosome 18 clone RP24-146N1, complete sequence Length = 139630 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 20893 ccaccacctcctcctcctcctcctcctc 20866
>ref|XM_484041.4| PREDICTED: Mus musculus chromodomain helicase DNA binding protein 3, transcript variant 1 (Chd3), mRNA Length = 7464 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 166 ccaccacctcctcctcctcctcctcctc 139
>gb|AC123693.13| Mus musculus chromosome 3, clone RP23-326F23, complete sequence Length = 225242 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 40884 ccaccacctcctcctcctcctcctcctc 40911
>gb|BC042749.2| Mus musculus WAS protein homology region 2 domain containing 1, mRNA (cDNA clone MGC:51670 IMAGE:5322109), complete cds Length = 2572 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 |||||| ||||||||||| ||||||||| Sbjct: 1768 ccaccagctcctcctccccctcctcctc 1795
>gb|AC145549.3| Mus musculus BAC clone RP23-21M23 from chromosome 19, complete sequence Length = 247655 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 241432 ccaccacctcctcctcctcctcctcctc 241459
>gb|AC132384.2| Mus musculus BAC clone RP23-438F16 from chromosome 10, complete sequence Length = 182097 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccaccacctcctcctcccgctcctcctc 89 ||||||||||||||||| ||||||||| Sbjct: 108319 ccaccacctcctcctcctcctcctcctc 108292
>gb|AC144902.2| Mus musculus BAC clone RP23-400D9 from chromosome 5, complete sequence Length = 204858 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 58 tctcccaccacctcctcctcccgctcctcctc 89 |||||| |||||||||||||| ||||||||| Sbjct: 164575 tctccctccacctcctcctcctcctcctcctc 164606 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,606,766 Number of Sequences: 3902068 Number of extensions: 4606766 Number of successful extensions: 285779 Number of sequences better than 10.0: 504 Number of HSP's better than 10.0 without gapping: 538 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 274364 Number of HSP's gapped (non-prelim): 11350 length of query: 523 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 500 effective length of database: 17,143,297,704 effective search space: 8571648852000 effective search space used: 8571648852000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)