ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart07g07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY103874.1| Zea mays PCO114884 mRNA sequence 155 2e-34
2dbj|AK104343.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 6e-31
3dbj|AK065911.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 6e-31
4gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome... 101 2e-18
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
6gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome... 101 2e-18
7ref|NM_165193.1| Drosophila melanogaster Ugt36Bc CG17932-RB, tra... 46 0.11
8ref|NM_144370.2| Drosophila melanogaster Ugt36Bc CG17932-RA, tra... 46 0.11
9gb|AY070939.1| Drosophila melanogaster RE03785 full length cDNA 46 0.11
10gb|AC093097.1| Drosophila melanogaster, chromosome 2L, region 36... 46 0.11
11gb|AC009250.3|AC009250 Drosophila melanogaster, chromosome 2L, r... 46 0.11
12gb|AE003652.2| Drosophila melanogaster chromosome 2L, section 61... 46 0.11
13gb|CP000249.1| Frankia sp. CcI3, complete genome 44 0.42
14ref|NM_189608.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
15ref|NM_195084.1| Oryza sativa (japonica cultivar-group) hypothet... 42 1.6
16gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 1.6
17gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.6
18emb|AL512343.21| Human DNA sequence from clone RP11-396C23 on ch... 42 1.6
19emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 42 1.6
20emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.6
21gb|AC113337.2| Genomic sequence for Oryza sativa (japonica culti... 42 1.6
22emb|AL645985.30| Mouse DNA sequence from clone DN-240H8 on chrom... 42 1.6
23gb|AC074355.6| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
24dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
25gb|AC009743.1| Homo sapiens 3 BAC RP11-372H2 (Roswell Park Cance... 42 1.6
26gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
27gb|AC131189.3| Mus musculus BAC clone RP24-330P2 from 8, complet... 42 1.6
28gb|AC146603.3| Mus musculus BAC clone RP23-304P17 from 8, comple... 42 1.6
29ref|NM_102463.3| Arabidopsis thaliana DNA binding AT1G27000 mRNA... 40 6.5
30ref|XM_470166.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
31gb|AC107681.15| Mus musculus chromosome 12, clone RP23-380M24, c... 40 6.5
32gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.5
33gb|AC118227.12| Mus musculus chromosome 15, clone RP23-379H6, co... 40 6.5
34emb|AL627089.13| Mouse DNA sequence from clone RP23-107H23 on ch... 40 6.5
35gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 6.5
36emb|AL358394.14| Human DNA sequence from clone RP11-445N18 on ch... 40 6.5
37gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genom... 40 6.5
38gb|AY056367.1| Arabidopsis thaliana unknown protein (At1g27000) ... 40 6.5
39gb|AF360143.1| Arabidopsis thaliana unknown protein (At1g27000) ... 40 6.5
40emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete ... 40 6.5
41emb|AJ320506.1|MMU320506 Mus musculus Dlk1 gene for delta-like a... 40 6.5
42gb|AC124148.15| Pan troglodytes clone rp43-71k6, complete sequence 40 6.5
43gb|U24241.2|SCU24241 Sorangium cellulosum acyl-CoA dehydrogenase... 40 6.5
44gb|AY057525.1| Arabidopsis thaliana At1g27000/T7N9_6 mRNA, compl... 40 6.5
45dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
46emb|BX815536.1|CNS0ABGY Arabidopsis thaliana Full-length cDNA Co... 40 6.5
47emb|BX832674.1|CNS0A24I Arabidopsis thaliana Full-length cDNA Co... 40 6.5
48gb|AC020917.4|AC020917 Homo sapiens chromosome 19 clone CTD-2013... 40 6.5
49gb|AC000348.2|AC000348 Genomic sequence for Arabidopsis thaliana... 40 6.5
50gb|AY085110.1| Arabidopsis thaliana clone 13008 mRNA, complete s... 40 6.5
51dbj|AK109423.2| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
52dbj|AK120398.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
53dbj|AK110355.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
54dbj|AK067486.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
55dbj|AK064956.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
56dbj|AK061994.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
57gb|AY104267.1| Zea mays PCO085704 mRNA sequence 40 6.5
58gb|AC005508.1|AC005508 Arabidopsis thaliana chromosome I BAC T2P... 40 6.5
59gb|AC154284.1| Mus musculus BAC clone RP23-452N24 from 16, compl... 40 6.5
60dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 40 6.5
61gb|AC165954.3| Mus musculus BAC clone RP23-450F5 from chromosome... 40 6.5
62gb|CP000036.1| Shigella boydii Sb227, complete genome 40 6.5 
>gb|AY103874.1| Zea mays PCO114884 mRNA sequence
          Length = 1259

 Score =  155 bits (78), Expect = 2e-34
 Identities = 102/110 (92%)
 Strand = Plus / Plus

                                                                       
Query: 362 ataactgttcttagtggaggttctggacaaacaggactatcaggactaatagtacctgca 421
           ||||||||||| | |||||||||||||||| ||||| ||||||| || ||||||||||||
Sbjct: 385 ataactgttctcaatggaggttctggacaatcaggagtatcaggcctgatagtacctgca 444

                                                             
Query: 422 gcaactgttggagcactgggttatggttatatgtggtggaaaggcatctc 471
           |||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 445 gcaactgtaggagcactgggttatggttatatgtggtggaaagggatctc 494



 Score =  113 bits (57), Expect = 5e-22
 Identities = 107/123 (86%), Gaps = 3/123 (2%)
 Strand = Plus / Plus

                                                                       
Query: 101 cggcgcgcagccatggcgatggtggcacaggcgggcttcggcctcacccgcgtcgtgatg 160
           ||||||||||||||||||||||||   ||||||||| | ||||||||||| |||||| | 
Sbjct: 121 cggcgcgcagccatggcgatggtg---caggcgggcatgggcctcacccgggtcgtggtc 177

                                                                       
Query: 161 ctcgtcggcgcgggcgtggccgggtccgtcgtcctacgcaacggccgcctctccgagatc 220
           ||||| ||||| ||||| ||||| |||||||| || |||||||| |||||| ||||||||
Sbjct: 178 ctcgttggcgccggcgtcgccggctccgtcgttctccgcaacggtcgcctcgccgagatc 237

              
Query: 221 ctc 223
           |||
Sbjct: 238 ctc 240
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>dbj|AK104343.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-B09, full
           insert sequence
          Length = 1342

 Score =  143 bits (72), Expect = 6e-31
 Identities = 108/120 (90%)
 Strand = Plus / Plus

                                                                       
Query: 362 ataactgttcttagtggaggttctggacaaacaggactatcaggactaatagtacctgca 421
           ||||||||||||| |||||||||||| ||||||||  | |||||  | ||||||||||||
Sbjct: 380 ataactgttcttaatggaggttctggtcaaacaggggtgtcaggtttgatagtacctgca 439

                                                                       
Query: 422 gcaactgttggagcactgggttatggttatatgtggtggaaaggcatctcctttggggac 481
           ||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||| ||||
Sbjct: 440 gcaactgttggagcactcggttatggttacatgtggtggaagggcatctcctttgcggac 499



 Score =  111 bits (56), Expect = 2e-21
 Identities = 130/154 (84%), Gaps = 3/154 (1%)
 Strand = Plus / Plus

                                                                       
Query: 111 ccatggcgatggtggcacaggcgggcttcggcctcacccgcgtcgtgatgctcgtcggcg 170
           ||||||||||||||   ||||| ||| | |||||||||||||||||  | ||| ||||||
Sbjct: 126 ccatggcgatggtg---caggccggcatgggcctcacccgcgtcgttgtcctcatcggcg 182

                                                                       
Query: 171 cgggcgtggccgggtccgtcgtcctacgcaacggccgcctctccgagatcctcacagaga 230
           | ||  ||||||| ||||||||||| |||||||||||||||||||||||||||   ||| 
Sbjct: 183 ccgggatggccggctccgtcgtcctccgcaacggccgcctctccgagatcctcggcgagc 242

                                             
Query: 231 tacaggagtttctggagaagggggagaatgggaa 264
           | |||||| | ||||| ||||||||||| |||||
Sbjct: 243 tccaggagatactggacaagggggagaaggggaa 276
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>dbj|AK065911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045E01, full
           insert sequence
          Length = 1377

 Score =  143 bits (72), Expect = 6e-31
 Identities = 108/120 (90%)
 Strand = Plus / Plus

                                                                       
Query: 362 ataactgttcttagtggaggttctggacaaacaggactatcaggactaatagtacctgca 421
           ||||||||||||| |||||||||||| ||||||||  | |||||  | ||||||||||||
Sbjct: 400 ataactgttcttaatggaggttctggtcaaacaggggtgtcaggtttgatagtacctgca 459

                                                                       
Query: 422 gcaactgttggagcactgggttatggttatatgtggtggaaaggcatctcctttggggac 481
           ||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||| ||||
Sbjct: 460 gcaactgttggagcactcggttatggttacatgtggtggaagggcatctcctttgcggac 519



 Score =  101 bits (51), Expect = 2e-18
 Identities = 98/113 (86%), Gaps = 3/113 (2%)
 Strand = Plus / Plus

                                                                       
Query: 111 ccatggcgatggtggcacaggcgggcttcggcctcacccgcgtcgtgatgctcgtcggcg 170
           ||||||||||||||   ||||| ||| | |||||||||||||||||  | ||| ||||||
Sbjct: 147 ccatggcgatggtg---caggccggcatgggcctcacccgcgtcgttgtcctcatcggcg 203

                                                                
Query: 171 cgggcgtggccgggtccgtcgtcctacgcaacggccgcctctccgagatcctc 223
           | ||  ||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 204 ccgggatggccggctccgtcgtcctccgcaacggccgcctctccgagatcctc 256
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>gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12,
            complete sequence
          Length = 187523

 Score =  101 bits (51), Expect = 2e-18
 Identities = 98/113 (86%), Gaps = 3/113 (2%)
 Strand = Plus / Plus

                                                                        
Query: 111  ccatggcgatggtggcacaggcgggcttcggcctcacccgcgtcgtgatgctcgtcggcg 170
            ||||||||||||||   ||||| ||| | |||||||||||||||||  | ||| ||||||
Sbjct: 8615 ccatggcgatggtg---caggccggcatgggcctcacccgcgtcgttgtcctcatcggcg 8671

                                                                 
Query: 171  cgggcgtggccgggtccgtcgtcctacgcaacggccgcctctccgagatcctc 223
            | ||  ||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 8672 ccgggatggccggctccgtcgtcctccgcaacggccgcctctccgagatcctc 8724



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 51/53 (96%)
 Strand = Plus / Plus

                                                                  
Query: 410   atagtacctgcagcaactgttggagcactgggttatggttatatgtggtggaa 462
             ||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 10194 atagtacctgcagcaactgttggagcactcggttatggttacatgtggtggaa 10246



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                               
Query: 362  ataactgttcttagtggaggttctggacaaacagg 396
            ||||||||||||| |||||||||||| ||||||||
Sbjct: 9733 ataactgttcttaatggaggttctggtcaaacagg 9767
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  101 bits (51), Expect = 2e-18
 Identities = 98/113 (86%), Gaps = 3/113 (2%)
 Strand = Plus / Plus

                                                                           
Query: 111     ccatggcgatggtggcacaggcgggcttcggcctcacccgcgtcgtgatgctcgtcggcg 170
               ||||||||||||||   ||||| ||| | |||||||||||||||||  | ||| ||||||
Sbjct: 4914030 ccatggcgatggtg---caggccggcatgggcctcacccgcgtcgttgtcctcatcggcg 4914086

                                                                    
Query: 171     cgggcgtggccgggtccgtcgtcctacgcaacggccgcctctccgagatcctc 223
               | ||  ||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 4914087 ccgggatggccggctccgtcgtcctccgcaacggccgcctctccgagatcctc 4914139



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 51/53 (96%)
 Strand = Plus / Plus

                                                                    
Query: 410     atagtacctgcagcaactgttggagcactgggttatggttatatgtggtggaa 462
               ||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 4915609 atagtacctgcagcaactgttggagcactcggttatggttacatgtggtggaa 4915661



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                  
Query: 362     ataactgttcttagtggaggttctggacaaacagg 396
               ||||||||||||| |||||||||||| ||||||||
Sbjct: 4915148 ataactgttcttaatggaggttctggtcaaacagg 4915182
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>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
              complete sequence
          Length = 187956

 Score =  101 bits (51), Expect = 2e-18
 Identities = 98/113 (86%), Gaps = 3/113 (2%)
 Strand = Plus / Plus

                                                                          
Query: 111    ccatggcgatggtggcacaggcgggcttcggcctcacccgcgtcgtgatgctcgtcggcg 170
              ||||||||||||||   ||||| ||| | |||||||||||||||||  | ||| ||||||
Sbjct: 186438 ccatggcgatggtg---caggccggcatgggcctcacccgcgtcgttgtcctcatcggcg 186494

                                                                   
Query: 171    cgggcgtggccgggtccgtcgtcctacgcaacggccgcctctccgagatcctc 223
              | ||  ||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 186495 ccgggatggccggctccgtcgtcctccgcaacggccgcctctccgagatcctc 186547



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                 
Query: 362    ataactgttcttagtggaggttctggacaaacagg 396
              ||||||||||||| |||||||||||| ||||||||
Sbjct: 187556 ataactgttcttaatggaggttctggtcaaacagg 187590
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>ref|NM_165193.1| Drosophila melanogaster Ugt36Bc CG17932-RB, transcript variant B
            (Ugt36Bc), mRNA
          Length = 1951

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 230  atacaggagtttctggagaaggg 252
            |||||||||||||||||||||||
Sbjct: 1144 atacaggagtttctggagaaggg 1166
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>ref|NM_144370.2| Drosophila melanogaster Ugt36Bc CG17932-RA, transcript variant A
            (Ugt36Bc), mRNA
          Length = 1931

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 230  atacaggagtttctggagaaggg 252
            |||||||||||||||||||||||
Sbjct: 1124 atacaggagtttctggagaaggg 1146
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>gb|AY070939.1| Drosophila melanogaster RE03785 full length cDNA
          Length = 1946

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 230  atacaggagtttctggagaaggg 252
            |||||||||||||||||||||||
Sbjct: 1124 atacaggagtttctggagaaggg 1146
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>gb|AC093097.1| Drosophila melanogaster, chromosome 2L, region 36A-36B, BAC clone
              BACR26O03, complete sequence
          Length = 175413

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 230    atacaggagtttctggagaaggg 252
              |||||||||||||||||||||||
Sbjct: 173868 atacaggagtttctggagaaggg 173890
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>gb|AC009250.3|AC009250 Drosophila melanogaster, chromosome 2L, region 36B-36B, BAC clone
              BACR27M18, complete sequence
          Length = 170362

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 230    atacaggagtttctggagaaggg 252
              |||||||||||||||||||||||
Sbjct: 166923 atacaggagtttctggagaaggg 166901
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>gb|AE003652.2| Drosophila melanogaster chromosome 2L, section 61 of 83 of the complete
              sequence
          Length = 262525

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 230    atacaggagtttctggagaaggg 252
              |||||||||||||||||||||||
Sbjct: 184902 atacaggagtttctggagaaggg 184924
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 92      gacgcgcggcggcgcgcagcca 113
               ||||||||||||||||||||||
Sbjct: 2240876 gacgcgcggcggcgcgcagcca 2240855



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 165     tcggcgcgggcgtggccggg 184
               ||||||||||||||||||||
Sbjct: 3481015 tcggcgcgggcgtggccggg 3481034
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>ref|NM_189608.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 861

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 148 ccgcgtcgtgatgctcgtcggcgcgggcgtggccgggtccgtcgtcctacgcaacggccg 207
           |||||||||  | ||||||||||| ||| ||||||| || |||||| | ||| |||||||
Sbjct: 33  ccgcgtcgtcctcctcgtcggcgccggcatggccggctcggtcgtcatccgcgacggccg 92

            
Query: 208 c 208
           |
Sbjct: 93  c 93
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>ref|NM_195084.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0071I20.21), mRNA
          Length = 1227

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 160 gctcgtcggcgcgggcgtggc 180
           |||||||||||||||||||||
Sbjct: 604 gctcgtcggcgcgggcgtggc 584
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 171     cgggcgtggccgggtccgtcg 191
               |||||||||||||||||||||
Sbjct: 1152922 cgggcgtggccgggtccgtcg 1152942
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 152    gtcgtgatgctcgtcggcgcgggcg 176
              |||| ||||||||||||||||||||
Sbjct: 990777 gtcgcgatgctcgtcggcgcgggcg 990753
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>emb|AL512343.21| Human DNA sequence from clone RP11-396C23 on chromosome 1 Contains the
             H3F3A gene for H3 histone, family 3A, a nove gene and four
             CpG islands, complete sequence
          Length = 105087

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 242   ctggagaagggggagaatggg 262
             |||||||||||||||||||||
Sbjct: 68149 ctggagaagggggagaatggg 68169
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>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 1715506

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 386     ggacaaacaggactatcaggactaa 410
               ||||||||||||||| |||||||||
Sbjct: 1207607 ggacaaacaggactaacaggactaa 1207631
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 152    gtcgtgatgctcgtcggcgcgggcg 176
              |||| ||||||||||||||||||||
Sbjct: 833307 gtcgcgatgctcgtcggcgcgggcg 833283
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>gb|AC113337.2| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OSJNBa0061H20, from chromosome 10,
             complete sequence
          Length = 135876

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 160   gctcgtcggcgcgggcgtggc 180
             |||||||||||||||||||||
Sbjct: 21165 gctcgtcggcgcgggcgtggc 21185
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>emb|AL645985.30| Mouse DNA sequence from clone DN-240H8 on chromosome 3 Contains part of
             a novel gene, a ribosomal protein L36 (Rpl36) pseudogene
             and a pseudogene similar to part of ribosomal protein S2
             (Rps2), complete sequence
          Length = 141661

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 247   gaagggggagaatgggaaggg 267
             |||||||||||||||||||||
Sbjct: 97201 gaagggggagaatgggaaggg 97221
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>gb|AC074355.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0071I20,
              complete sequence
          Length = 145510

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 160    gctcgtcggcgcgggcgtggc 180
              |||||||||||||||||||||
Sbjct: 142484 gctcgtcggcgcgggcgtggc 142504
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 160     gctcgtcggcgcgggcgtggc 180
               |||||||||||||||||||||
Sbjct: 4595121 gctcgtcggcgcgggcgtggc 4595141
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>gb|AC009743.1| Homo sapiens 3 BAC RP11-372H2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 159821

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 255   agaatgggaagggaggaggtg 275
             |||||||||||||||||||||
Sbjct: 22696 agaatgggaagggaggaggtg 22676
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 160     gctcgtcggcgcgggcgtggc 180
               |||||||||||||||||||||
Sbjct: 4595942 gctcgtcggcgcgggcgtggc 4595962
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>gb|AC131189.3| Mus musculus BAC clone RP24-330P2 from 8, complete sequence
          Length = 157757

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 256   gaatgggaagggaggaggtgg 276
             |||||||||||||||||||||
Sbjct: 69448 gaatgggaagggaggaggtgg 69428
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>gb|AC146603.3| Mus musculus BAC clone RP23-304P17 from 8, complete sequence
          Length = 167842

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 256   gaatgggaagggaggaggtgg 276
             |||||||||||||||||||||
Sbjct: 15546 gaatgggaagggaggaggtgg 15526
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>ref|NM_102463.3| Arabidopsis thaliana DNA binding AT1G27000 mRNA, complete cds
          Length = 1355

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 443 tatggttatatgtggtggaa 462
           ||||||||||||||||||||
Sbjct: 464 tatggttatatgtggtggaa 483
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>ref|XM_470166.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1626

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  gccgcctctccgagatcctc 223
            ||||||||||||||||||||
Sbjct: 1130 gccgcctctccgagatcctc 1149
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>gb|AC107681.15| Mus musculus chromosome 12, clone RP23-380M24, complete sequence
          Length = 186496

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   gagaatgggaagggaggagg 273
             ||||||||||||||||||||
Sbjct: 86036 gagaatgggaagggaggagg 86055
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 204      gccgcctctccgagatcctc 223
                ||||||||||||||||||||
Sbjct: 34686159 gccgcctctccgagatcctc 34686178
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>gb|AC118227.12| Mus musculus chromosome 15, clone RP23-379H6, complete sequence
          Length = 200663

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 234   aggagtttctggagaagggggaga 257
             |||||||||||||||||| |||||
Sbjct: 51867 aggagtttctggagaaggaggaga 51890
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>emb|AL627089.13| Mouse DNA sequence from clone RP23-107H23 on chromosome 4, complete
             sequence
          Length = 182375

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 244   ggagaagggggagaatgggaaggg 267
             |||||||||| |||||||||||||
Sbjct: 28971 ggagaaggggaagaatgggaaggg 28948
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 96      cgcggcggcgcgcagccatg 115
               ||||||||||||||||||||
Sbjct: 1601852 cgcggcggcgcgcagccatg 1601871
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>emb|AL358394.14| Human DNA sequence from clone RP11-445N18 on chromosome 10 Contains
             four novel genes, the 5' end of a novel gene, a Ras
             suppressor protein 1 pseudogene, a pseudogene similar to
             part of cubilin (intrinsic factor-cobalamin receptor,
             CUBN),  the 5' end of a breast cancer antigen (NY-BR-1)
             pseudogene, a ribosomal protein S19 pseudogene, and a
             novel pseudogene similar to part of KIAA1052 protein,
             complete sequence
          Length = 116859

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   aatgggaagggaggaggtgg 276
             ||||||||||||||||||||
Sbjct: 47065 aatgggaagggaggaggtgg 47084
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>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete
              sequence
          Length = 164236

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    gccgcctctccgagatcctc 223
              ||||||||||||||||||||
Sbjct: 143876 gccgcctctccgagatcctc 143895
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>gb|AY056367.1| Arabidopsis thaliana unknown protein (At1g27000) mRNA, complete cds
          Length = 946

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 443 tatggttatatgtggtggaa 462
           ||||||||||||||||||||
Sbjct: 322 tatggttatatgtggtggaa 341
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>gb|AF360143.1| Arabidopsis thaliana unknown protein (At1g27000) mRNA, complete cds
          Length = 1272

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 443 tatggttatatgtggtggaa 462
           ||||||||||||||||||||
Sbjct: 397 tatggttatatgtggtggaa 416
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>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29
          Length = 293050

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    cgtcggcgcgggcgtggccg 182
              ||||||||||||||||||||
Sbjct: 288766 cgtcggcgcgggcgtggccg 288747
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>emb|AJ320506.1|MMU320506 Mus musculus Dlk1 gene for delta-like and Gtl2 gene
          Length = 111805

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 254   gagaatgggaagggaggagg 273
             ||||||||||||||||||||
Sbjct: 30873 gagaatgggaagggaggagg 30854
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>gb|AC124148.15| Pan troglodytes clone rp43-71k6, complete sequence
          Length = 194187

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 257    aatgggaagggaggaggtgg 276
              ||||||||||||||||||||
Sbjct: 153702 aatgggaagggaggaggtgg 153721
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>gb|U24241.2|SCU24241 Sorangium cellulosum acyl-CoA dehydrogenase (sorE),
            beta-hydroxybutyryl-CoA dehydrogenase (sorD), putative
            methoxymalonyl-CoA synthase (sorC), reductase (sorR),
            soraphen polyketide synthase A (sorA), soraphen
            polyketide synthase B (sorB), O-methyltransferase (sorM),
            beta-mannanase, and xylanse-arabinofuranosidase
            bifunctional enzyme genes, complete cds; and unknown
            genes
          Length = 67523

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 149  cgcgtcgtgatgctcgtcggcgcgggcg 176
            |||| |||| ||||||||||||||||||
Sbjct: 2159 cgcggcgtgctgctcgtcggcgcgggcg 2186
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>gb|AY057525.1| Arabidopsis thaliana At1g27000/T7N9_6 mRNA, complete cds
          Length = 1257

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 443 tatggttatatgtggtggaa 462
           ||||||||||||||||||||
Sbjct: 397 tatggttatatgtggtggaa 416
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 204      gccgcctctccgagatcctc 223
                ||||||||||||||||||||
Sbjct: 34776231 gccgcctctccgagatcctc 34776250
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>emb|BX815536.1|CNS0ABGY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS70ZB06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1264

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 443 tatggttatatgtggtggaa 462
           ||||||||||||||||||||
Sbjct: 464 tatggttatatgtggtggaa 483
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>emb|BX832674.1|CNS0A24I Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH89ZG08 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1434

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 266  ggaggaggtggcggtgcgga 285
            ||||||||||||||||||||
Sbjct: 1217 ggaggaggtggcggtgcgga 1198
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>gb|AC020917.4|AC020917 Homo sapiens chromosome 19 clone CTD-2013N17, complete sequence
          Length = 151088

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 242   ctggagaagggggagaatgggaag 265
             |||||||| |||||||||||||||
Sbjct: 98137 ctggagaaaggggagaatgggaag 98160
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>gb|AC000348.2|AC000348 Genomic sequence for Arabidopsis thaliana BAC T7N9 from chromosome I,
             complete sequence
          Length = 111566

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 443   tatggttatatgtggtggaa 462
             ||||||||||||||||||||
Sbjct: 16389 tatggttatatgtggtggaa 16408
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>gb|AY085110.1| Arabidopsis thaliana clone 13008 mRNA, complete sequence
          Length = 1244

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 443 tatggttatatgtggtggaa 462
           ||||||||||||||||||||
Sbjct: 395 tatggttatatgtggtggaa 414
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>dbj|AK109423.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-G05, full
           insert sequence
          Length = 1584

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 gccgcctctccgagatcctc 223
           ||||||||||||||||||||
Sbjct: 916 gccgcctctccgagatcctc 935
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>dbj|AK120398.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087C11, full
            insert sequence
          Length = 2770

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  gccgcctctccgagatcctc 223
            ||||||||||||||||||||
Sbjct: 2102 gccgcctctccgagatcctc 2121
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>dbj|AK110355.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-H12, full
           insert sequence
          Length = 3574

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 164 gtcggcgcgggcgtggccgg 183
           ||||||||||||||||||||
Sbjct: 403 gtcggcgcgggcgtggccgg 384
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>dbj|AK067486.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108N23, full
            insert sequence
          Length = 3621

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  gccgcctctccgagatcctc 223
            ||||||||||||||||||||
Sbjct: 2971 gccgcctctccgagatcctc 2990
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>dbj|AK064956.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A06, full
            insert sequence
          Length = 5529

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  gccgcctctccgagatcctc 223
            ||||||||||||||||||||
Sbjct: 4861 gccgcctctccgagatcctc 4880
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>dbj|AK061994.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-C05, full
            insert sequence
          Length = 1936

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  gccgcctctccgagatcctc 223
            ||||||||||||||||||||
Sbjct: 1222 gccgcctctccgagatcctc 1241
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>gb|AY104267.1| Zea mays PCO085704 mRNA sequence
          Length = 1009

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 419 gcagcaactgttggagcactgggttatggttatatgtggtggaa 462
           |||||| | ||||||||| |||||||| | || |||||||||||
Sbjct: 432 gcagcagcagttggagcaatgggttattgctacatgtggtggaa 475
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>gb|AC005508.1|AC005508 Arabidopsis thaliana chromosome I BAC T2P11 genomic sequence, complete
             sequence
          Length = 85372

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 443   tatggttatatgtggtggaa 462
             ||||||||||||||||||||
Sbjct: 82843 tatggttatatgtggtggaa 82862
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>gb|AC154284.1| Mus musculus BAC clone RP23-452N24 from 16, complete sequence
          Length = 182088

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 244   ggagaagggggagaatgggaagggagga 271
             |||||||||| |||| ||||||||||||
Sbjct: 34285 ggagaaggggaagaaggggaagggagga 34258
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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 250    gggggagaatgggaagggaggagg 273
              |||||| |||||||||||||||||
Sbjct: 549122 gggggaaaatgggaagggaggagg 549145
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>gb|AC165954.3| Mus musculus BAC clone RP23-450F5 from chromosome 12, complete
            sequence
          Length = 184826

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 254  gagaatgggaagggaggagg 273
            ||||||||||||||||||||
Sbjct: 6066 gagaatgggaagggaggagg 6085
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>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    tcggcgcgggcgtggccggg 184
              ||||||||||||||||||||
Sbjct: 890149 tcggcgcgggcgtggccggg 890130


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,189,598
Number of Sequences: 3902068
Number of extensions: 3189598
Number of successful extensions: 75061
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73938
Number of HSP's gapped (non-prelim): 1117
length of query: 481
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 459
effective length of database: 17,147,199,772
effective search space: 7870564695348
effective search space used: 7870564695348
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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