Clone Name | bart07g03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | UDU1_ARATH (Q9FHD5) DUF26 domain-containing protein 1 precursor | 45 | 7e-05 | 2 | UDU2_ARATH (Q9FHD4) DUF26 domain-containing protein 2 precursor | 45 | 7e-05 | 3 | UDU3_ARATH (Q9FHD3) Hypothetical DUF26 domain-containing protein... | 42 | 6e-04 |
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>UDU1_ARATH (Q9FHD5) DUF26 domain-containing protein 1 precursor| Length = 286 Score = 45.4 bits (106), Expect = 7e-05 Identities = 19/54 (35%), Positives = 30/54 (55%) Frame = +1 Query: 304 VWGLAQCRGDVPRQNCSLCLAAAAKEVASSCRGSSDGRVFYDYCLLRYSTAXFI 465 V G+ C GDV R C+ C+ A E+A +C + ++Y C++RYS F+ Sbjct: 79 VHGMFLCIGDVNRTTCNACVKNATIEIAKNCTNHREAIIYYFSCMVRYSDKFFL 132 Score = 30.8 bits (68), Expect = 1.9 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +1 Query: 313 LAQCRGDVPRQNCSLCLAAAAKEVASSCRGSSDGRVFYDYCLLRYSTA 456 + QC + +NC+ CL A +E+ C +F CL+ + T+ Sbjct: 198 VVQCSPHLDPKNCTTCLKLALQELTQCCGDQLWAFIFTPKCLVSFDTS 245
>UDU2_ARATH (Q9FHD4) DUF26 domain-containing protein 2 precursor| Length = 287 Score = 45.4 bits (106), Expect = 7e-05 Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 4/108 (3%) Frame = +1 Query: 154 SGVDAIGTYC---AXNGTSAET-QASIDQVLAALVPXXXXXXXXXXXXXXXXXXVWGLAQ 321 S D + T+C + N TS T +++ +L+ L V G+ Sbjct: 24 SDPDDMETFCMKSSRNTTSNTTYNKNLNTLLSTLSNQSSFANYYNLTTGLASDTVHGMFL 83 Query: 322 CRGDVPRQNCSLCLAAAAKEVASSCRGSSDGRVFYDYCLLRYSTAXFI 465 C GDV R C+ C+ A E+A +C + ++ C++RYS F+ Sbjct: 84 CTGDVNRTTCNACVKNATIEIAKNCTNHREAIIYNVDCMVRYSDKFFL 131 Score = 32.0 bits (71), Expect = 0.85 Identities = 12/47 (25%), Positives = 23/47 (48%) Frame = +1 Query: 313 LAQCRGDVPRQNCSLCLAAAAKEVASSCRGSSDGRVFYDYCLLRYST 453 + QC D+ +NC+ CL A +E+ C ++ C++ + T Sbjct: 197 IVQCTPDLDPRNCTTCLKLALQELTECCGNQVWAFIYTPNCMVSFDT 243
>UDU3_ARATH (Q9FHD3) Hypothetical DUF26 domain-containing protein 3 precursor| Length = 287 Score = 42.4 bits (98), Expect = 6e-04 Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 4/108 (3%) Frame = +1 Query: 154 SGVDAIGTYC--AXNGTSAET--QASIDQVLAALVPXXXXXXXXXXXXXXXXXXVWGLAQ 321 S D + T+C + T+ T +++ +L+ V+G+ Sbjct: 28 SETDHMDTFCIDSSRNTTGNTTYNKNLNTMLSTFRNQSSIVNNYNLTTGLASDTVYGMFL 87 Query: 322 CRGDVPRQNCSLCLAAAAKEVASSCRGSSDGRVFYDYCLLRYSTAXFI 465 C GDV C+ C+ A E+ +C + ++Y C++RYS F+ Sbjct: 88 CTGDVNITTCNNCVKNATIEIVKNCTNHREAIIYYIDCMVRYSDKFFL 135 Score = 32.3 bits (72), Expect = 0.65 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 313 LAQCRGDVPRQNCSLCLAAAAKEVASSCRGSSDGRVFYDYCLLRY 447 L QC + +NC++CL A +E+ C +F C + Y Sbjct: 201 LVQCSPHLNPENCTICLEYALQEIIDCCSDKFWAMIFTPNCFVNY 245 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,478,640 Number of Sequences: 219361 Number of extensions: 316142 Number of successful extensions: 859 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 848 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 859 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)