ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart07g02 |
|---|---|
| Clone Library Name | barley_pub |
>NIFUN_MOUSE (Q9D7P6) NifU-like N-terminal domain containing protein,| mitochondrial precursor (NifU-like protein) (Iron-sulfur cluster assembly enzyme ISCU) Length = 168 Score = 129 bits (324), Expect = 5e-30 Identities = 63/75 (84%), Positives = 67/75 (89%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 YH++VVDHY NPRNVGS DK NVGTGLVGAPACGDVMKLQI+VDE GKIVDA FKTF Sbjct: 36 YHKKVVDHYENPRNVGSLDKTSKNVGTGLVGAPACGDVMKLQIQVDE-KGKIVDARFKTF 94 Query: 473 GCGSAIASSSVATEW 517 GCGSAIASSS+ATEW Sbjct: 95 GCGSAIASSSLATEW 109
>NIFUN_HUMAN (Q9H1K1) NifU-like N-terminal domain-containing protein,| mitochondrial precursor (NifU-like protein) (Iron-sulfur cluster assembly enzyme ISCU) Length = 167 Score = 129 bits (324), Expect = 5e-30 Identities = 63/75 (84%), Positives = 67/75 (89%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 YH++VVDHY NPRNVGS DK NVGTGLVGAPACGDVMKLQI+VDE GKIVDA FKTF Sbjct: 35 YHKKVVDHYENPRNVGSLDKTSKNVGTGLVGAPACGDVMKLQIQVDE-KGKIVDARFKTF 93 Query: 473 GCGSAIASSSVATEW 517 GCGSAIASSS+ATEW Sbjct: 94 GCGSAIASSSLATEW 108
>NIFU_BUCAP (O51885) NifU-like protein| Length = 128 Score = 119 bits (297), Expect = 6e-27 Identities = 56/75 (74%), Positives = 64/75 (85%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 Y ++V+DHY NPRNVGSF D NVG+GLVGAPACGDVMKLQI+V+E G I DACFKT+ Sbjct: 3 YSKKVMDHYENPRNVGSFSNSDSNVGSGLVGAPACGDVMKLQIKVNE-QGIIEDACFKTY 61 Query: 473 GCGSAIASSSVATEW 517 GCGSAIASSS+ TEW Sbjct: 62 GCGSAIASSSLVTEW 76
>ISU1_YARLI (Q6CFQ0) Iron sulfur cluster assembly protein 1, mitochondrial| precursor (Iron sulfur cluster scaffold protein 1) Length = 181 Score = 119 bits (297), Expect = 6e-27 Identities = 58/74 (78%), Positives = 64/74 (86%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 YHE+V+DHYNNPRNVGS +K+D +VGTGLVGAPACGDVMKLQIRVD+ G I D FKTF Sbjct: 37 YHEKVLDHYNNPRNVGSMNKNDEDVGTGLVGAPACGDVMKLQIRVDD-NGVIQDVKFKTF 95 Query: 473 GCGSAIASSSVATE 514 GCGSAIASSS TE Sbjct: 96 GCGSAIASSSYVTE 109
>NIFU_HAEIN (Q57074) NifU-like protein| Length = 126 Score = 118 bits (295), Expect = 1e-26 Identities = 56/75 (74%), Positives = 64/75 (85%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 Y E+V+DHY NPRNVGS DK D NVGTG+VGAPACGDVM+LQI+VD+ G I DA FKT+ Sbjct: 3 YSEKVIDHYENPRNVGSLDKKDSNVGTGMVGAPACGDVMQLQIKVDD-NGIIEDAKFKTY 61 Query: 473 GCGSAIASSSVATEW 517 GCGSAIASSS+ TEW Sbjct: 62 GCGSAIASSSLITEW 76
>ISU1_KLULA (Q6CRQ9) Iron sulfur cluster assembly protein 1, mitochondrial| precursor (Iron sulfur cluster scaffold protein 1) Length = 180 Score = 118 bits (295), Expect = 1e-26 Identities = 56/74 (75%), Positives = 63/74 (85%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 YH +V+DHY NPRNVGS DK+ PNVGTGLVGAPACGDVMKLQI+V++ TG I + FKTF Sbjct: 51 YHPKVIDHYTNPRNVGSLDKNLPNVGTGLVGAPACGDVMKLQIQVNDETGVIENVKFKTF 110 Query: 473 GCGSAIASSSVATE 514 GCGSAIASSS TE Sbjct: 111 GCGSAIASSSYMTE 124
>NIFU_BUCAI (P57658) NifU-like protein| Length = 127 Score = 117 bits (294), Expect = 1e-26 Identities = 56/75 (74%), Positives = 64/75 (85%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 Y ++V+DHY NPRNVGSF D NVG+GLVGAPACGDVMKLQI+V+E G I DACFKT+ Sbjct: 3 YSKKVMDHYENPRNVGSFSSTDLNVGSGLVGAPACGDVMKLQIKVNE-KGIIEDACFKTY 61 Query: 473 GCGSAIASSSVATEW 517 GCGSAIASSS+ TEW Sbjct: 62 GCGSAIASSSLVTEW 76
>NIFU_SHIFL (P0ACD7) NifU-like protein| Length = 128 Score = 117 bits (293), Expect = 2e-26 Identities = 55/75 (73%), Positives = 65/75 (86%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 Y E+V+DHY NPRNVGSFD +D NVG+G+VGAPACGDVMKLQI+V++ G I DA FKT+ Sbjct: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFKTY 61 Query: 473 GCGSAIASSSVATEW 517 GCGSAIASSS+ TEW Sbjct: 62 GCGSAIASSSLVTEW 76
>NIFU_ECOLI (P0ACD4) NifU-like protein| Length = 128 Score = 117 bits (293), Expect = 2e-26 Identities = 55/75 (73%), Positives = 65/75 (86%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 Y E+V+DHY NPRNVGSFD +D NVG+G+VGAPACGDVMKLQI+V++ G I DA FKT+ Sbjct: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFKTY 61 Query: 473 GCGSAIASSSVATEW 517 GCGSAIASSS+ TEW Sbjct: 62 GCGSAIASSSLVTEW 76
>NIFU_ECOL6 (P0ACD5) NifU-like protein| Length = 128 Score = 117 bits (293), Expect = 2e-26 Identities = 55/75 (73%), Positives = 65/75 (86%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 Y E+V+DHY NPRNVGSFD +D NVG+G+VGAPACGDVMKLQI+V++ G I DA FKT+ Sbjct: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFKTY 61 Query: 473 GCGSAIASSSVATEW 517 GCGSAIASSS+ TEW Sbjct: 62 GCGSAIASSSLVTEW 76
>NIFU_ECO57 (P0ACD6) NifU-like protein| Length = 128 Score = 117 bits (293), Expect = 2e-26 Identities = 55/75 (73%), Positives = 65/75 (86%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 Y E+V+DHY NPRNVGSFD +D NVG+G+VGAPACGDVMKLQI+V++ G I DA FKT+ Sbjct: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVND-EGIIEDARFKTY 61 Query: 473 GCGSAIASSSVATEW 517 GCGSAIASSS+ TEW Sbjct: 62 GCGSAIASSSLVTEW 76
>NIFU_BUCBP (Q89A18) NifU-like protein| Length = 126 Score = 116 bits (291), Expect = 3e-26 Identities = 55/75 (73%), Positives = 64/75 (85%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 Y ++V+DHY NPRNVGSF D NVG+GLVGAPACGDVMKLQI+V++ G I DACFKT+ Sbjct: 3 YSKKVIDHYENPRNVGSFKTIDANVGSGLVGAPACGDVMKLQIKVNK-NGIIQDACFKTY 61 Query: 473 GCGSAIASSSVATEW 517 GCGSAIASSS+ TEW Sbjct: 62 GCGSAIASSSLVTEW 76
>ISU1_DEBHA (Q6BGU0) Iron sulfur cluster assembly protein 1, mitochondrial| precursor (Iron sulfur cluster scaffold protein 1) Length = 179 Score = 116 bits (290), Expect = 4e-26 Identities = 55/74 (74%), Positives = 64/74 (86%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 YHE+V+DHY+NPRNVG+ +K D +VGTGLVGAPACGDVM+LQI+VD+ TG I D FKTF Sbjct: 37 YHEKVLDHYSNPRNVGTLNKLDVDVGTGLVGAPACGDVMRLQIQVDDETGVIKDVKFKTF 96 Query: 473 GCGSAIASSSVATE 514 GCGSAIASSS TE Sbjct: 97 GCGSAIASSSYLTE 110
>ISU1_YEAST (Q03020) Iron sulfur cluster assembly protein 1, mitochondrial| precursor (Iron sulfur cluster scaffold protein 1) Length = 165 Score = 115 bits (289), Expect = 5e-26 Identities = 54/74 (72%), Positives = 62/74 (83%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 YH +V++HY +PRNVGS DK PNVGTGLVGAPACGDVM+LQI+V++ TG I D FKTF Sbjct: 35 YHPKVIEHYTHPRNVGSLDKKLPNVGTGLVGAPACGDVMRLQIKVNDSTGVIEDVKFKTF 94 Query: 473 GCGSAIASSSVATE 514 GCGSAIASSS TE Sbjct: 95 GCGSAIASSSYMTE 108
>ISU1_CANGA (Q6FJY3) Iron sulfur cluster assembly protein 1, mitochondrial| precursor (Iron sulfur cluster scaffold protein 1) Length = 213 Score = 115 bits (287), Expect = 9e-26 Identities = 54/74 (72%), Positives = 62/74 (83%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 YH +V++HY +PRNVGS DK PNVGTGLVGAPACGDVM+LQI+V++ TG I D FKTF Sbjct: 83 YHPKVIEHYTHPRNVGSMDKTLPNVGTGLVGAPACGDVMRLQIKVNDKTGVIEDVKFKTF 142 Query: 473 GCGSAIASSSVATE 514 GCGSAIASSS TE Sbjct: 143 GCGSAIASSSYMTE 156
>ISU1_ASHGO (Q75C07) Iron sulfur cluster assembly protein 1, mitochondrial| precursor (Iron sulfur cluster scaffold protein 1) Length = 154 Score = 114 bits (286), Expect = 1e-25 Identities = 54/74 (72%), Positives = 61/74 (82%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 YH +V+DHY NPRNVG+ DK NVGTGLVGAPACGDVM+LQI+VD+ TG I + FKTF Sbjct: 25 YHPKVIDHYTNPRNVGTLDKKLTNVGTGLVGAPACGDVMRLQIQVDDSTGVIENVKFKTF 84 Query: 473 GCGSAIASSSVATE 514 GCGSAIASSS TE Sbjct: 85 GCGSAIASSSYMTE 98
>NIFU_RICPR (Q9ZD61) NifU-like protein| Length = 131 Score = 112 bits (279), Expect = 8e-25 Identities = 55/75 (73%), Positives = 60/75 (80%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 Y ++V+DHY NPRNVGS DK NVGTGLVGAPACGDVMKLQI V + I DA FKTF Sbjct: 3 YSKKVIDHYENPRNVGSLDKKKKNVGTGLVGAPACGDVMKLQIEVGDDE-IITDAKFKTF 61 Query: 473 GCGSAIASSSVATEW 517 GCGSAIASSS+ TEW Sbjct: 62 GCGSAIASSSLVTEW 76
>ISU2_YEAST (Q12056) Iron sulfur cluster assembly protein 2, mitochondrial| precursor (Iron sulfur cluster scaffold protein 2) Length = 156 Score = 110 bits (275), Expect = 2e-24 Identities = 52/74 (70%), Positives = 61/74 (82%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 YH +V+DHY NPRNVGS DK NVGTG+VGAPACGDV+KLQI+V++ +G I + FKTF Sbjct: 27 YHPKVIDHYTNPRNVGSMDKSLANVGTGIVGAPACGDVIKLQIQVNDKSGIIENVKFKTF 86 Query: 473 GCGSAIASSSVATE 514 GCGSAIASSS TE Sbjct: 87 GCGSAIASSSYMTE 100
>ISU1_SCHPO (Q9UTC6) Iron sulfur cluster assembly protein 1, mitochondrial| precursor (Iron sulfur cluster scaffold protein 1) Length = 192 Score = 108 bits (269), Expect = 1e-23 Identities = 60/115 (52%), Positives = 69/115 (60%) Frame = +2 Query: 167 PSLLAMLRAGGSRLVAPGLRRFXXXXXXXXXXXXXXXXXXXXYHERVVDHYNNPRNVGSF 346 PS+LA S L P +F YH+ V+DHYNNPRNVG+ Sbjct: 15 PSILAQR---SSLLARPANLQFLKTNSSKFVPQVTANVSRRMYHKNVLDHYNNPRNVGTL 71 Query: 347 DKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTFGCGSAIASSSVAT 511 K DP+VG GLVGAPACGDVM+L IRV++ G I D FKTFGCGSAIASSS T Sbjct: 72 PKGDPDVGIGLVGAPACGDVMRLAIRVNK-DGVIEDVKFKTFGCGSAIASSSYVT 125
>NIFU_AQUAE (O67045) NifU-like protein| Length = 157 Score = 76.3 bits (186), Expect = 5e-14 Identities = 41/74 (55%), Positives = 49/74 (66%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 Y+E+V+DH+ NPRNVG + D N G G G PACGD M I+V+ I D FKTF Sbjct: 5 YNEKVLDHFLNPRNVGVLE--DAN-GVGQCGNPACGDAMLFTIKVNPENDVIEDVRFKTF 61 Query: 473 GCGSAIASSSVATE 514 GCGSAIA SS+ TE Sbjct: 62 GCGSAIAVSSMLTE 75
>NIFU_AZOVI (P05340) Nitrogen fixation protein nifU| Length = 312 Score = 72.8 bits (177), Expect = 5e-13 Identities = 36/74 (48%), Positives = 51/74 (68%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 Y E+V +H+ NP+N G+ + + G VG+ +CGD ++L ++VD T I+DA F+TF Sbjct: 4 YSEKVKEHFYNPKNAGAVEGAN---AIGDVGSLSCGDALRLTLKVDPETDVILDAGFQTF 60 Query: 473 GCGSAIASSSVATE 514 GCGSAIASSS TE Sbjct: 61 GCGSAIASSSALTE 74
>NIFU_AZOCH (P23121) Nitrogen fixation protein nifU| Length = 309 Score = 71.6 bits (174), Expect = 1e-12 Identities = 36/74 (48%), Positives = 51/74 (68%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 Y E+V +H+ NP+N G+ + + G VG+ +CGD ++L ++VD T I+DA F+TF Sbjct: 4 YSEKVKEHFYNPKNAGAVEGAN---AIGDVGSLSCGDRLRLTLKVDPETDVILDAGFQTF 60 Query: 473 GCGSAIASSSVATE 514 GCGSAIASSS TE Sbjct: 61 GCGSAIASSSALTE 74
>NIFU_KLEPN (P05343) Nitrogen fixation protein nifU| Length = 274 Score = 70.1 bits (170), Expect = 3e-12 Identities = 37/74 (50%), Positives = 48/74 (64%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 Y E+V DH+ NPRN D + G VG+ +CGD ++L +RVD + I +A F+TF Sbjct: 4 YSEKVKDHFFNPRNARVVDNAN---AVGDVGSLSCGDALRLMLRVDPQSEIIEEAGFQTF 60 Query: 473 GCGSAIASSSVATE 514 GCGSAIASSS TE Sbjct: 61 GCGSAIASSSALTE 74
>NIFU_ANAAZ (Q43885) Nitrogen fixation protein nifU| Length = 300 Score = 68.9 bits (167), Expect = 8e-12 Identities = 37/77 (48%), Positives = 53/77 (68%), Gaps = 3/77 (3%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSF-DKDDPNV--GTGLVGAPACGDVMKLQIRVDEGTGKIVDACF 463 Y ++V++ + +P+N G D +P V TG VG+ ACGD ++L I+V+ + KIVD+ F Sbjct: 4 YTDKVLELFYDPKNQGVIEDNGEPGVKVATGEVGSIACGDALRLHIKVEVESDKIVDSRF 63 Query: 464 KTFGCGSAIASSSVATE 514 +TFGC SAIASSS TE Sbjct: 64 QTFGCTSAIASSSALTE 80
>NIFU_ANASP (P20628) Nitrogen fixation protein nifU| Length = 300 Score = 68.6 bits (166), Expect = 1e-11 Identities = 35/77 (45%), Positives = 53/77 (68%), Gaps = 3/77 (3%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDP---NVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACF 463 Y ++V++ + +P+N G +++ V TG VG+ ACGD ++L I+V+ + KIVD+ F Sbjct: 4 YTDKVLELFYDPKNQGVIEENGEPGVKVATGEVGSIACGDALRLHIKVEVESDKIVDSRF 63 Query: 464 KTFGCGSAIASSSVATE 514 +TFGC SAIASSS TE Sbjct: 64 QTFGCTSAIASSSALTE 80
>NIFU_AZOBR (Q43909) Nitrogen fixation protein nifU| Length = 310 Score = 62.0 bits (149), Expect = 9e-10 Identities = 31/68 (45%), Positives = 44/68 (64%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTF 472 Y ++V +H+ NP+N G+ D+ D G VG+ CGD +KL ++V+ DA F+TF Sbjct: 4 YTDKVKEHFFNPKNAGALDEADD---VGEVGSITCGDALKLMMKVNPDQPGHRDANFQTF 60 Query: 473 GCGSAIAS 496 GCGSAIAS Sbjct: 61 GCGSAIAS 68
>NIFU_BACSU (O32163) NifU-like protein| Length = 147 Score = 45.4 bits (106), Expect = 9e-05 Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Frame = +2 Query: 293 YHERVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIV-DACFKT 469 Y + ++DHY NPRN G + D V + P CGD ++L +++D G IV DA F+ Sbjct: 11 YRQVIMDHYKNPRNKGVLN-DSIVVD---MNNPTCGDRIRLTMKLD---GDIVEDAKFEG 63 Query: 470 FGCGSAIASSSVATE 514 GC ++AS+S+ T+ Sbjct: 64 EGCSISMASASMMTQ 78
>NIFU_RHOSH (Q01180) Nitrogen fixation protein nifU| Length = 246 Score = 41.6 bits (96), Expect = 0.001 Identities = 23/70 (32%), Positives = 36/70 (51%) Frame = +2 Query: 302 RVVDHYNNPRNVGSFDKDDPNVGTGLVGAPACGDVMKLQIRVDEGTGKIVDACFKTFGCG 481 + +D + NPRN G + D G G+ GD ++L +R++ G++ +A F FG Sbjct: 7 KALDLFFNPRNAGPLEAAD---AVGTAGSLEVGDAIRLMLRIE--AGRVAEARFLAFGGA 61 Query: 482 SAIASSSVAT 511 AIA S T Sbjct: 62 HAIACGSALT 71
>GP1BA_HUMAN (P07359) Platelet glycoprotein Ib alpha chain precursor| (Glycoprotein Ibalpha) (GP-Ib alpha) (GPIbA) (GPIb-alpha) (Antigen CD42b-alpha) (CD42b antigen) [Contains: Glycocalicin] Length = 626 Score = 31.6 bits (70), Expect = 1.3 Identities = 19/57 (33%), Positives = 28/57 (49%) Frame = -2 Query: 504 TEDDAIAEPQPKVLKQASTIFPVPSSTRICSFMTSPQAGAPTSPVPTLGSSLSKDPT 334 T +EP P+ +T+ P PS T TS A +PT+P PT +++ PT Sbjct: 383 TPSPTTSEPVPEPAPNMTTLEPTPSPTT--PEPTSEPAPSPTTPEPTPIPTIATSPT 437
>MTG8R_HUMAN (O43439) Protein CBFA2T2 (MTG8-like protein) (MTG8-related protein| 1) (Myeloid translocation-related protein 1) (ETO homologous on chromosome 20) (p85) Length = 604 Score = 30.0 bits (66), Expect = 3.9 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +3 Query: 9 VCPSPPAHRIATSSAAAQTVETTTIPQICLPSFSPG*TTHPEP 137 + P PPA R+ T S A + P + +P +PG HP P Sbjct: 251 IAPEPPAKRVCTISPAPR-----HSPALTVPLMNPGGQFHPTP 288
>3BP5_HUMAN (O60239) SH3 domain-binding protein 5 (SH3 domain-binding protein| that preferentially associates with BTK) Length = 425 Score = 30.0 bits (66), Expect = 3.9 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -1 Query: 499 G*RDCGAAAEGLEAGVDDLPGAFVDTD 419 G R CG AEG V+DLPG+ + D Sbjct: 237 GPRGCGVGAEGSSTSVEDLPGSKPEPD 263
>CANB_DROME (Q9VT65) Calpain B (EC 3.4.22.-) (Calcium-activated neutral| proteinase B) (CANP B) [Contains: Calpain B catalytic subunit 1; Calpain B catalytic subunit 2] Length = 925 Score = 29.3 bits (64), Expect = 6.7 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = -2 Query: 480 PQPKVLKQASTIFPVPSSTRICSFMTSPQAGAPTSPVP 367 PQP + A+ + P PS+ M P A PTSP P Sbjct: 142 PQPNLPYPAAPLAPYPSAMPGLPGMPMPYAPMPTSPAP 179
>PRG4_HUMAN (Q92954) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte| stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part] Length = 1404 Score = 29.3 bits (64), Expect = 6.7 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Frame = -2 Query: 483 EPQPKVLKQASTIFPVPSSTRICSFMTSPQAGAPTS---PVPT 364 EP P +K A T P+ T S T+P+ APT+ P PT Sbjct: 365 EPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPT 407
>MTG8R_MOUSE (O70374) Protein CBFA2T2 (MTG8-like protein) (MTG8-related protein| 1) Length = 574 Score = 29.3 bits (64), Expect = 6.7 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +3 Query: 9 VCPSPPAHRIATSSAAAQTVETTTIPQICLPSFSPG*TTHPEP 137 V P PPA R+ T S A + P + +P +PG HP P Sbjct: 222 VPPEPPAKRVCTISPAPR-----HSPALTVPLMNPGGQFHPTP 259
>SODC_MYCPA (Q9AGW2) Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)| Length = 227 Score = 28.9 bits (63), Expect = 8.7 Identities = 31/118 (26%), Positives = 42/118 (35%), Gaps = 10/118 (8%) Frame = +2 Query: 128 SXAGERQRNPEAPPSLLAMLRAGGSRLVAPGLRRFXXXXXXXXXXXXXXXXXXXXYHERV 307 S AG + P A PS+ L+A VA F +H Sbjct: 44 SGAGAAEAAPAAAPSITTHLKAPDGTQVATAKFEFSNGYATVTIETTANGVLTPGFHGVH 103 Query: 308 VDHYNN--PRNV---GSFDKDDPNVG-----TGLVGAPACGDVMKLQIRVDEGTGKIV 451 + P +V G D + G G G PA GD+ LQ+R D G+G +V Sbjct: 104 IHKVGKCEPSSVAPTGGAPGDFLSAGGHFQAPGHTGEPASGDLTSLQVRKD-GSGTLV 160
>CF23_DROME (Q01522) Chorion transcription factor Cf2, isoform III| Length = 514 Score = 28.9 bits (63), Expect = 8.7 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 7/65 (10%) Frame = +3 Query: 3 SQVCPSPPAHRIATSSAAAQTVETTTIPQICL-------PSFSPG*TTHPEPENVRGIQR 161 S P+ P H++AT A T++T +P + + P + P H + E + + Sbjct: 34 STAAPATPTHQVATVIANMDTLKTAFLPNLSMDPNVHVSPHYCP--MCHQQFERPQHVAD 91 Query: 162 HPRVC 176 H ++C Sbjct: 92 HMQLC 96
>CF2_DROME (P20385) Chorion transcription factor Cf2, isoforms I/II| Length = 510 Score = 28.9 bits (63), Expect = 8.7 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 7/65 (10%) Frame = +3 Query: 3 SQVCPSPPAHRIATSSAAAQTVETTTIPQICL-------PSFSPG*TTHPEPENVRGIQR 161 S P+ P H++AT A T++T +P + + P + P H + E + + Sbjct: 34 STAAPATPTHQVATVIANMDTLKTAFLPNLSMDPNVHVSPHYCP--MCHQQFERPQHVAD 91 Query: 162 HPRVC 176 H ++C Sbjct: 92 HMQLC 96
>WEB1_YEAST (P38968) Protein WEB1 (Protein transport protein SEC31)| Length = 1273 Score = 28.9 bits (63), Expect = 8.7 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +3 Query: 18 SPPAHRIATSSAAAQTVETTTIPQICLPSFSPG 116 +PP + AT++ A V TT+IPQ PG Sbjct: 852 APPPNPYATATVPATNVSTTSIPQNTFAPIQPG 884 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,599,244 Number of Sequences: 219361 Number of extensions: 1064372 Number of successful extensions: 4011 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 3744 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3985 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
