Clone Name | bart07g02 |
---|---|
Clone Library Name | barley_pub |
>gb|AY106085.1| Zea mays PCO077224 mRNA sequence Length = 1007 Score = 329 bits (166), Expect = 5e-87 Identities = 226/246 (91%) Strand = Plus / Plus Query: 272 gcggcggcgggggcgagggcgtaccacgagcgggtggtggaccactacaacaacccgcgg 331 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 gcggcggcggggatgagggcgtaccacgagcgggtggtggaccactacaacaacccgcgg 228 Query: 332 aacgtggggtccttcgacaaggacgaccccaacgtcggcaccgggctggtcggcgcgccg 391 ||||| || |||||||||||||| |||||||||||||| || |||||||||||||||||| Sbjct: 229 aacgtcggttccttcgacaaggaggaccccaacgtcggtactgggctggtcggcgcgccg 288 Query: 392 gcctgcggcgacgtcatgaagctgcagatccgtgtcgacgaaggcaccgggaagatcgtc 451 ||||||||||||||||||||| |||||||||| |||||||| | | |||| || |||||| Sbjct: 289 gcctgcggcgacgtcatgaagttgcagatccgcgtcgacgaggactccggtaaaatcgtc 348 Query: 452 gacgcctgcttcaagaccttcggctgcggctccgcaatcgcgtcatcctccgtcgctacc 511 |||||||||||||||||||| |||||||||||||| || ||||| || ||||||||||| Sbjct: 349 gacgcctgcttcaagacctttggctgcggctccgccatagcgtcctcgtccgtcgctact 408 Query: 512 gaatgg 517 |||||| Sbjct: 409 gaatgg 414
>ref|NM_192496.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 516 Score = 280 bits (141), Expect = 4e-72 Identities = 213/237 (89%) Strand = Plus / Plus Query: 281 ggggcgagggcgtaccacgagcgggtggtggaccactacaacaacccgcggaacgtgggg 340 ||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 88 ggggcgaaggcgtaccacgagcgggtggtggaccactacgagaacccgcggaacgtgggg 147 Query: 341 tccttcgacaaggacgaccccaacgtcggcaccgggctggtcggcgcgccggcctgcggc 400 || ||||| || |||||||||| |||||| || |||||||| || ||||||||||||||| Sbjct: 148 tcgttcgagaacgacgaccccagcgtcgggacggggctggtgggggcgccggcctgcggc 207 Query: 401 gacgtcatgaagctgcagatccgtgtcgacgaaggcaccgggaagatcgtcgacgcctgc 460 ||||| ||||||||||||||||| |||||||| || |||| |||||||||||||| ||| Sbjct: 208 gacgtgatgaagctgcagatccgcgtcgacgagagctccggcaagatcgtcgacgcatgc 267 Query: 461 ttcaagaccttcggctgcggctccgcaatcgcgtcatcctccgtcgctaccgaatgg 517 ||||||||||| || ||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 268 ttcaagacctttgggtgcggatccgccatcgcgtcctcctccgtcgctactgaatgg 324 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Plus Query: 186 tgcgcgcgggaggaagccggctcgtcgcgcccggactccggcgcttcctcggc 238 ||||||||||||| || |||||| | || ||||| |||||||| |||||||| Sbjct: 5 tgcgcgcgggagggaggcggctcttggcccccgggctccggcgggtcctcggc 57
>dbj|AK119723.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-G11, full insert sequence Length = 889 Score = 280 bits (141), Expect = 4e-72 Identities = 213/237 (89%) Strand = Plus / Plus Query: 281 ggggcgagggcgtaccacgagcgggtggtggaccactacaacaacccgcggaacgtgggg 340 ||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 141 ggggcgaaggcgtaccacgagcgggtggtggaccactacgagaacccgcggaacgtgggg 200 Query: 341 tccttcgacaaggacgaccccaacgtcggcaccgggctggtcggcgcgccggcctgcggc 400 || ||||| || |||||||||| |||||| || |||||||| || ||||||||||||||| Sbjct: 201 tcgttcgagaacgacgaccccagcgtcgggacggggctggtgggggcgccggcctgcggc 260 Query: 401 gacgtcatgaagctgcagatccgtgtcgacgaaggcaccgggaagatcgtcgacgcctgc 460 ||||| ||||||||||||||||| |||||||| || |||| |||||||||||||| ||| Sbjct: 261 gacgtgatgaagctgcagatccgcgtcgacgagagctccggcaagatcgtcgacgcatgc 320 Query: 461 ttcaagaccttcggctgcggctccgcaatcgcgtcatcctccgtcgctaccgaatgg 517 ||||||||||| || ||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 321 ttcaagacctttgggtgcggatccgccatcgcgtcctcctccgtcgctactgaatgg 377 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 180 cgatgttgcgcgcgggaggaagccggctcgtcgcgcccggactccggcgcttcctcggc 238 ||||| ||||||||||||| || |||||| | || ||||| |||||||| |||||||| Sbjct: 52 cgatgctgcgcgcgggagggaggcggctcttggcccccgggctccggcgggtcctcggc 110
>dbj|AK098887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001K01, full insert sequence Length = 835 Score = 280 bits (141), Expect = 4e-72 Identities = 213/237 (89%) Strand = Plus / Plus Query: 281 ggggcgagggcgtaccacgagcgggtggtggaccactacaacaacccgcggaacgtgggg 340 ||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 131 ggggcgaaggcgtaccacgagcgggtggtggaccactacgagaacccgcggaacgtgggg 190 Query: 341 tccttcgacaaggacgaccccaacgtcggcaccgggctggtcggcgcgccggcctgcggc 400 || ||||| || |||||||||| |||||| || |||||||| || ||||||||||||||| Sbjct: 191 tcgttcgagaacgacgaccccagcgtcgggacggggctggtgggggcgccggcctgcggc 250 Query: 401 gacgtcatgaagctgcagatccgtgtcgacgaaggcaccgggaagatcgtcgacgcctgc 460 ||||| ||||||||||||||||| |||||||| || |||| |||||||||||||| ||| Sbjct: 251 gacgtgatgaagctgcagatccgcgtcgacgagagctccggcaagatcgtcgacgcatgc 310 Query: 461 ttcaagaccttcggctgcggctccgcaatcgcgtcatcctccgtcgctaccgaatgg 517 ||||||||||| || ||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 311 ttcaagacctttgggtgcggatccgccatcgcgtcctcctccgtcgctactgaatgg 367 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 180 cgatgttgcgcgcgggaggaagccggctcgtcgcgcccggactccggcgcttcctcggc 238 ||||| ||||||||||||| || |||||| | || ||||| |||||||| |||||||| Sbjct: 42 cgatgctgcgcgcgggagggaggcggctcttggcccccgggctccggcgggtcctcggc 100
>dbj|AK062234.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-D11, full insert sequence Length = 832 Score = 280 bits (141), Expect = 4e-72 Identities = 213/237 (89%) Strand = Plus / Plus Query: 281 ggggcgagggcgtaccacgagcgggtggtggaccactacaacaacccgcggaacgtgggg 340 ||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 191 ggggcgaaggcgtaccacgagcgggtggtggaccactacgagaacccgcggaacgtgggg 250 Query: 341 tccttcgacaaggacgaccccaacgtcggcaccgggctggtcggcgcgccggcctgcggc 400 || ||||| || |||||||||| |||||| || |||||||| || ||||||||||||||| Sbjct: 251 tcgttcgagaacgacgaccccagcgtcgggacggggctggtgggggcgccggcctgcggc 310 Query: 401 gacgtcatgaagctgcagatccgtgtcgacgaaggcaccgggaagatcgtcgacgcctgc 460 ||||| ||||||||||||||||| |||||||| || |||| |||||||||||||| ||| Sbjct: 311 gacgtgatgaagctgcagatccgcgtcgacgagagctccggcaagatcgtcgacgcatgc 370 Query: 461 ttcaagaccttcggctgcggctccgcaatcgcgtcatcctccgtcgctaccgaatgg 517 ||||||||||| || ||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 371 ttcaagacctttgggtgcggatccgccatcgcgtcctcctccgtcgctactgaatgg 427 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 180 cgatgttgcgcgcgggaggaagccggctcgtcgcgcccggactccggcgcttcctcggc 238 ||||| ||||||||||||| || |||||| | || ||||| |||||||| |||||||| Sbjct: 102 cgatgctgcgcgcgggagggaggcggctcttggcccccgggctccggcgggtcctcggc 160
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 266 bits (134), Expect = 7e-68 Identities = 203/226 (89%) Strand = Plus / Minus Query: 281 ggggcgagggcgtaccacgagcgggtggtggaccactacaacaacccgcggaacgtgggg 340 ||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 27043546 ggggcgaaggcgtaccacgagcgggtggtggaccactacgagaacccgcggaacgtgggg 27043487 Query: 341 tccttcgacaaggacgaccccaacgtcggcaccgggctggtcggcgcgccggcctgcggc 400 || ||||| || |||||||||| |||||| || |||||||| || ||||||||||||||| Sbjct: 27043486 tcgttcgagaacgacgaccccagcgtcgggacggggctggtgggggcgccggcctgcggc 27043427 Query: 401 gacgtcatgaagctgcagatccgtgtcgacgaaggcaccgggaagatcgtcgacgcctgc 460 ||||| ||||||||||||||||| |||||||| || |||| |||||||||||||| ||| Sbjct: 27043426 gacgtgatgaagctgcagatccgcgtcgacgagagctccggcaagatcgtcgacgcatgc 27043367 Query: 461 ttcaagaccttcggctgcggctccgcaatcgcgtcatcctccgtcg 506 ||||||||||| || ||||| ||||| |||||||| |||||||||| Sbjct: 27043366 ttcaagacctttgggtgcggatccgccatcgcgtcctcctccgtcg 27043321 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 180 cgatgttgcgcgcgggaggaagccggctcgtcgcgcccggactccggcgcttcctcggc 238 ||||| ||||||||||||| || |||||| | || ||||| |||||||| |||||||| Sbjct: 27043635 cgatgctgcgcgcgggagggaggcggctcttggcccccgggctccggcgggtcctcggc 27043577 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 ggcggcggcgggggcgagggcgta 294 ||||||| |||||||||||||||| Sbjct: 3579834 ggcggcgtcgggggcgagggcgta 3579857
>dbj|AP003284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671D01 Length = 163006 Score = 266 bits (134), Expect = 7e-68 Identities = 203/226 (89%) Strand = Plus / Minus Query: 281 ggggcgagggcgtaccacgagcgggtggtggaccactacaacaacccgcggaacgtgggg 340 ||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 102377 ggggcgaaggcgtaccacgagcgggtggtggaccactacgagaacccgcggaacgtgggg 102318 Query: 341 tccttcgacaaggacgaccccaacgtcggcaccgggctggtcggcgcgccggcctgcggc 400 || ||||| || |||||||||| |||||| || |||||||| || ||||||||||||||| Sbjct: 102317 tcgttcgagaacgacgaccccagcgtcgggacggggctggtgggggcgccggcctgcggc 102258 Query: 401 gacgtcatgaagctgcagatccgtgtcgacgaaggcaccgggaagatcgtcgacgcctgc 460 ||||| ||||||||||||||||| |||||||| || |||| |||||||||||||| ||| Sbjct: 102257 gacgtgatgaagctgcagatccgcgtcgacgagagctccggcaagatcgtcgacgcatgc 102198 Query: 461 ttcaagaccttcggctgcggctccgcaatcgcgtcatcctccgtcg 506 ||||||||||| || ||||| ||||| |||||||| |||||||||| Sbjct: 102197 ttcaagacctttgggtgcggatccgccatcgcgtcctcctccgtcg 102152 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 180 cgatgttgcgcgcgggaggaagccggctcgtcgcgcccggactccggcgcttcctcggc 238 ||||| ||||||||||||| || |||||| | || ||||| |||||||| |||||||| Sbjct: 102466 cgatgctgcgcgcgggagggaggcggctcttggcccccgggctccggcgggtcctcggc 102408
>dbj|AK099656.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066C15, full insert sequence Length = 3054 Score = 266 bits (134), Expect = 7e-68 Identities = 203/226 (89%) Strand = Plus / Plus Query: 281 ggggcgagggcgtaccacgagcgggtggtggaccactacaacaacccgcggaacgtgggg 340 ||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 131 ggggcgaaggcgtaccacgagcgggtggtggaccactacgagaacccgcggaacgtgggg 190 Query: 341 tccttcgacaaggacgaccccaacgtcggcaccgggctggtcggcgcgccggcctgcggc 400 || ||||| || |||||||||| |||||| || |||||||| || ||||||||||||||| Sbjct: 191 tcgttcgagaacgacgaccccagcgtcgggacggggctggtgggggcgccggcctgcggc 250 Query: 401 gacgtcatgaagctgcagatccgtgtcgacgaaggcaccgggaagatcgtcgacgcctgc 460 ||||| ||||||||||||||||| |||||||| || |||| |||||||||||||| ||| Sbjct: 251 gacgtgatgaagctgcagatccgcgtcgacgagagctccggcaagatcgtcgacgcatgc 310 Query: 461 ttcaagaccttcggctgcggctccgcaatcgcgtcatcctccgtcg 506 ||||||||||| || ||||| ||||| |||||||| |||||||||| Sbjct: 311 ttcaagacctttgggtgcggatccgccatcgcgtcctcctccgtcg 356 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 180 cgatgttgcgcgcgggaggaagccggctcgtcgcgcccggactccggcgcttcctcggc 238 ||||| ||||||||||||| || |||||| | || ||||| |||||||| |||||||| Sbjct: 42 cgatgctgcgcgcgggagggaggcggctcttggcccccgggctccggcgggtcctcggc 100
>dbj|AK069724.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030J11, full insert sequence Length = 964 Score = 266 bits (134), Expect = 7e-68 Identities = 200/222 (90%) Strand = Plus / Plus Query: 286 gagggcgtaccacgagcgggtggtggaccactacaacaacccgcggaacgtggggtcctt 345 ||||| |||||||||||||||||||||||||||| |||||||||||||||||||| | || Sbjct: 206 gagggggtaccacgagcgggtggtggaccactacgacaacccgcggaacgtggggacgtt 265 Query: 346 cgacaaggacgaccccaacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgt 405 |||||||||||||||| |||| ||||| || || |||||||||||||| ||||||||||| Sbjct: 266 cgacaaggacgaccccgacgtgggcacgggactcgtcggcgcgccggcgtgcggcgacgt 325 Query: 406 catgaagctgcagatccgtgtcgacgaaggcaccgggaagatcgtcgacgcctgcttcaa 465 |||||||||||||||||| |||||||| | |||| | |||||| |||||||||||||| Sbjct: 326 catgaagctgcagatccgcgtcgacgaggagtccggtaggatcgtggacgcctgcttcaa 385 Query: 466 gaccttcggctgcggctccgcaatcgcgtcatcctccgtcgc 507 ||||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 386 gaccttcgggtgcggctccgccatcgcctcctcctccgtcgc 427
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11, complete sequence Length = 204649 Score = 264 bits (133), Expect = 3e-67 Identities = 199/221 (90%) Strand = Plus / Plus Query: 286 gagggcgtaccacgagcgggtggtggaccactacaacaacccgcggaacgtggggtcctt 345 ||||| |||||||||||||||||||||||||||| |||||||||||||||||||| | || Sbjct: 149870 gagggggtaccacgagcgggtggtggaccactacgacaacccgcggaacgtggggacgtt 149929 Query: 346 cgacaaggacgaccccaacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgt 405 |||||||||||||||| |||| ||||| || || |||||||||||||| ||||||||||| Sbjct: 149930 cgacaaggacgaccccgacgtgggcacgggactcgtcggcgcgccggcgtgcggcgacgt 149989 Query: 406 catgaagctgcagatccgtgtcgacgaaggcaccgggaagatcgtcgacgcctgcttcaa 465 |||||||||||||||||| |||||||| | |||| | |||||| |||||||||||||| Sbjct: 149990 catgaagctgcagatccgcgtcgacgaggagtccggtaggatcgtggacgcctgcttcaa 150049 Query: 466 gaccttcggctgcggctccgcaatcgcgtcatcctccgtcg 506 ||||||||| ||||||||||| ||||| || |||||||||| Sbjct: 150050 gaccttcgggtgcggctccgccatcgcctcctcctccgtcg 150090
>gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0040E06, complete sequence Length = 160907 Score = 264 bits (133), Expect = 3e-67 Identities = 199/221 (90%) Strand = Plus / Plus Query: 286 gagggcgtaccacgagcgggtggtggaccactacaacaacccgcggaacgtggggtcctt 345 ||||| |||||||||||||||||||||||||||| |||||||||||||||||||| | || Sbjct: 2380 gagggggtaccacgagcgggtggtggaccactacgacaacccgcggaacgtggggacgtt 2439 Query: 346 cgacaaggacgaccccaacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgt 405 |||||||||||||||| |||| ||||| || || |||||||||||||| ||||||||||| Sbjct: 2440 cgacaaggacgaccccgacgtgggcacgggactcgtcggcgcgccggcgtgcggcgacgt 2499 Query: 406 catgaagctgcagatccgtgtcgacgaaggcaccgggaagatcgtcgacgcctgcttcaa 465 |||||||||||||||||| |||||||| | |||| | |||||| |||||||||||||| Sbjct: 2500 catgaagctgcagatccgcgtcgacgaggagtccggtaggatcgtggacgcctgcttcaa 2559 Query: 466 gaccttcggctgcggctccgcaatcgcgtcatcctccgtcg 506 ||||||||| ||||||||||| ||||| || |||||||||| Sbjct: 2560 gaccttcgggtgcggctccgccatcgcctcctcctccgtcg 2600
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 264 bits (133), Expect = 3e-67 Identities = 199/221 (90%) Strand = Plus / Plus Query: 286 gagggcgtaccacgagcgggtggtggaccactacaacaacccgcggaacgtggggtcctt 345 ||||| |||||||||||||||||||||||||||| |||||||||||||||||||| | || Sbjct: 28069705 gagggggtaccacgagcgggtggtggaccactacgacaacccgcggaacgtggggacgtt 28069764 Query: 346 cgacaaggacgaccccaacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgt 405 |||||||||||||||| |||| ||||| || || |||||||||||||| ||||||||||| Sbjct: 28069765 cgacaaggacgaccccgacgtgggcacgggactcgtcggcgcgccggcgtgcggcgacgt 28069824 Query: 406 catgaagctgcagatccgtgtcgacgaaggcaccgggaagatcgtcgacgcctgcttcaa 465 |||||||||||||||||| |||||||| | |||| | |||||| |||||||||||||| Sbjct: 28069825 catgaagctgcagatccgcgtcgacgaggagtccggtaggatcgtggacgcctgcttcaa 28069884 Query: 466 gaccttcggctgcggctccgcaatcgcgtcatcctccgtcg 506 ||||||||| ||||||||||| ||||| || |||||||||| Sbjct: 28069885 gaccttcgggtgcggctccgccatcgcctcctcctccgtcg 28069925
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 101 bits (51), Expect = 2e-18 Identities = 99/115 (86%) Strand = Plus / Minus Query: 309 tggaccactacaacaacccgcggaacgtggggtccttcgacaaggacgaccccaacgtcg 368 ||||||||||| | |||||||| ||||| || ||||||| ||||||||| |||| Sbjct: 3194819 tggaccactacgaaaacccgcgcaacgtcggttccttcgcgaaggacgacgatgcggtcg 3194760 Query: 369 gcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatccg 423 ||||||| |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 3194759 gcaccggcatggtcggcgcgccggcctgcggcgacgtgatgaagctgcagatccg 3194705 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 tcggcccgggcgccggcgaga 254 ||||||||||||||||||||| Sbjct: 2370286 tcggcccgggcgccggcgaga 2370306
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/120 (85%) Strand = Plus / Minus Query: 309 tggaccactacaacaacccgcggaacgtggggtccttcgacaaggacgaccccaacgtcg 368 |||| |||||| | |||||||| ||||| || || |||| ||||||||| || |||| Sbjct: 2500713 tggatcactacgaaaacccgcgcaacgtcggttcgttcgcgaaggacgacgacacggtcg 2500654 Query: 369 gcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatccgtgtcg 428 |||| || |||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 2500653 gcacgggcatggtcggcgcgccggcctgcggcgacgtgatgaagctgcagatccgcgtcg 2500594
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 89.7 bits (45), Expect = 8e-15 Identities = 96/113 (84%) Strand = Plus / Plus Query: 309 tggaccactacaacaacccgcggaacgtggggtccttcgacaaggacgaccccaacgtcg 368 ||||||||||| | ||||| || ||||| || ||||||| |||| |||| || |||| Sbjct: 1074285 tggaccactacgaaaacccccgcaacgtcggcgccttcgagaagggcgacgacacggtcg 1074344 Query: 369 gcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatc 421 ||||||| |||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1074345 gcaccggcatggtcggcgcgccggcgtgcggcgacgtgatgaagctgcagatc 1074397 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 461 ttcaagaccttcggctgcggctccgcaatcgc 492 |||||||||| |||||||||||| || ||||| Sbjct: 1074434 ttcaagacctacggctgcggctcggccatcgc 1074465
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 89.7 bits (45), Expect = 8e-15 Identities = 96/113 (84%) Strand = Plus / Minus Query: 309 tggaccactacaacaacccgcggaacgtggggtccttcgacaaggacgaccccaacgtcg 368 |||| |||||| | || ||||| ||||| || || |||||||||| |||| || | ||| Sbjct: 1139540 tggatcactacgaaaatccgcgcaacgtcggctcgttcgacaagggcgacgacagcatcg 1139481 Query: 369 gcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatc 421 ||||||| ||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 1139480 gcaccggcatggtcggcgcgccggcctgtggcgacgtgatgaagctgcagatc 1139428 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 461 ttcaagaccttcggctgcggctccgcaatcgc 492 |||||||||| ||||||||||||||| ||||| Sbjct: 1139391 ttcaagacctacggctgcggctccgccatcgc 1139360
>emb|BX038347.1|CNS091R3 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAB2CH05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 652 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 362 aacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| Sbjct: 516 aacgtcggcaccgggctggtcggtgctccggcctgcggtgacgtgatgaagctgcagat 458
>emb|BX037758.1|CNS091AQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAB1BD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 569 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 362 aacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| Sbjct: 488 aacgtcggcaccgggctggtcggtgctccggcctgcggtgacgtgatgaagctgcagat 430
>emb|BX037757.1|CNS091AP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB1BD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 569 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 362 aacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| Sbjct: 239 aacgtcggcaccgggctggtcggtgctccggcctgcggtgacgtgatgaagctgcagat 297
>emb|BX035230.1|CNS08ZCI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA6BH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 787 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 362 aacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| Sbjct: 250 aacgtcggcaccgggctggtcggtgctccggcctgcggtgacgtgatgaagctgcagat 308
>emb|BX033770.1|CNS08Y7Y Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA5BF02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 784 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 362 aacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| Sbjct: 248 aacgtcggcaccgggctggtcggtgctccggcctgcggtgacgtgatgaagctgcagat 306
>emb|BX029307.1|CNS08URZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA43DB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 778 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 362 aacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| Sbjct: 245 aacgtcggcaccgggctggtcggtgctccggcctgcggtgacgtgatgaagctgcagat 303
>emb|BX023194.1|CNS08Q26 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA35BH04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 689 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 362 aacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| Sbjct: 460 aacgtcggcaccgggctggtcggtgctccggcctgcggtgacgtgatgaagctgcagat 402
>emb|BX023193.1|CNS08Q25 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA35BH04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 755 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 362 aacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| Sbjct: 231 aacgtcggcaccgggctggtcggtgctccggcctgcggtgacgtgatgaagctgcagat 289
>emb|BX018711.1|CNS08MLN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA28BF09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 760 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 362 aacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| Sbjct: 242 aacgtcggcaccgggctggtcggtgctccggcctgcggtgacgtgatgaagctgcagat 300
>emb|BX017355.1|CNS08LJZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA26AF04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 756 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 362 aacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| Sbjct: 462 aacgtcggcaccgggctggtcggtgctccggcctgcggtgacgtgatgaagctgcagat 404
>emb|BX017354.1|CNS08LJY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA26AF04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 764 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 362 aacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| Sbjct: 247 aacgtcggcaccgggctggtcggtgctccggcctgcggtgacgtgatgaagctgcagat 305
>emb|BX006750.1|CNS08DDE Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA11BE06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 798 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 362 aacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| Sbjct: 262 aacgtcggcaccgggctggtcggtgctccggcctgcggtgacgtgatgaagctgcagat 320
>ref|XM_315834.2| Anopheles gambiae str. PEST ENSANGP00000010440 (ENSANGG00000007951), mRNA Length = 711 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 362 aacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||| Sbjct: 243 aacgtcggcaccgggctggtcggtgctccggcctgcggtgacgtgatgaagctgcagat 301
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 365 gtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatc 421 ||||||||||| ||||| |||||||| |||||||||||||| ||||||||||||||| Sbjct: 3269892 gtcggcaccggtctggtgggcgcgcccgcctgcggcgacgtgatgaagctgcagatc 3269836 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 461 ttcaagaccttcggctgcggctccgcaatcgc 492 |||||||||||||| |||||||| || ||||| Sbjct: 3269799 ttcaagaccttcggttgcggctcggcgatcgc 3269768
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 345 tcgacaaggacgaccccaacgtcggcaccgggctggtcggcgcgccggcctgcggcgacg 404 |||||||| ||||||| ||||||| || || ||||| ||||| |||||||||||||||| Sbjct: 690934 tcgacaagaacgacccggacgtcgggacgggcctggtgggcgccccggcctgcggcgacg 690993 Query: 405 tcatgaagctgcagatc 421 | ||||||||||||||| Sbjct: 690994 tgatgaagctgcagatc 691010 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 461 ttcaagaccttcggctgcggctccgcaatcgcgtc 495 |||||||| |||||||||||||| || |||||||| Sbjct: 691047 ttcaagacgttcggctgcggctcggccatcgcgtc 691081
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 77.8 bits (39), Expect = 3e-11 Identities = 96/115 (83%) Strand = Plus / Minus Query: 309 tggaccactacaacaacccgcggaacgtggggtccttcgacaaggacgaccccaacgtcg 368 ||||||||||| | || ||||| ||||| || || |||| ||||||||| || || | Sbjct: 1780637 tggaccactacgaaaatccgcgtaacgtcggctcgttcgcgaaggacgacgacacggtgg 1780578 Query: 369 gcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatccg 423 ||||||| ||||||||||||| || ||||||||||| ||||||||||||||||| Sbjct: 1780577 gcaccggcatggtcggcgcgcccgcgtgcggcgacgtgatgaagctgcagatccg 1780523
>gb|AY657452.1| Synthetic construct Peudomonas aeruginosa clone FLH033263.01F PA3813 gene, partial cds Length = 387 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 359 cccaacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgt 405 ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 73 cccaacgtcggcaccggcatggtcggcgcgccggcctgcggcgacgt 119
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 77.8 bits (39), Expect = 3e-11 Identities = 96/115 (83%) Strand = Plus / Minus Query: 309 tggaccactacaacaacccgcggaacgtggggtccttcgacaaggacgaccccaacgtcg 368 ||||||||||| | || ||||| ||||| || || |||| ||||||||| || || | Sbjct: 3026161 tggaccactacgaaaatccgcgtaacgtcggctcgttcgcgaaggacgacgacacggtgg 3026102 Query: 369 gcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatccg 423 ||||||| ||||||||||||| || ||||||||||| ||||||||||||||||| Sbjct: 3026101 gcaccggcatggtcggcgcgcccgcgtgcggcgacgtgatgaagctgcagatccg 3026047
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 77.8 bits (39), Expect = 3e-11 Identities = 96/115 (83%) Strand = Plus / Minus Query: 309 tggaccactacaacaacccgcggaacgtggggtccttcgacaaggacgaccccaacgtcg 368 ||||||||||| | || ||||| ||||| || || |||| ||||||||| || || | Sbjct: 2756092 tggaccactacgaaaatccgcgtaacgtcggctcgttcgcgaaggacgacgacacggtgg 2756033 Query: 369 gcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatccg 423 ||||||| ||||||||||||| || ||||||||||| ||||||||||||||||| Sbjct: 2756032 gcaccggcatggtcggcgcgcccgcgtgcggcgacgtgatgaagctgcagatccg 2755978
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 311 gaccactacaacaacccgcggaacgtggggtccttcgacaaggacgaccccaacgtcggc 370 ||||||||| | || || || ||||| || ||||||||||||||||| | ||| ||| Sbjct: 243187 gaccactacgaaaatccccgcaacgtcggctccttcgacaaggacgaagacggcgtgggc 243246 Query: 371 accgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatc 421 ||||| | |||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 243247 accggcgtcgtcggcgctccggcctgcggcgacgtgatgaagctgcagatc 243297
>gb|AE004799.1| Pseudomonas aeruginosa PAO1, section 360 of 529 of the complete genome Length = 14652 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 359 cccaacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgt 405 ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 3821 cccaacgtcggcaccggcatggtcggcgcgccggcctgcggcgacgt 3775
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 364 cgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatc 421 |||||| ||||| ||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1219361 cgtcgggaccggcatggtcggcgcgcccgcgtgcggcgacgtcatgaagctgcagatc 1219418 Score = 40.1 bits (20), Expect = 7.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 265 ggggctggcggcg-gcgggggcgagggcgtac 295 ||||||||||||| |||||| ||||||||||| Sbjct: 634227 ggggctggcggcgtgcggggtcgagggcgtac 634258
>gb|DQ214195.1| Taeniopygia guttata clone 0061P0022B07 nitrogen fixation cluster-like (NIFU)-like mRNA, complete sequence Length = 608 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 362 aacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagct 414 ||||| |||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 151 aacgtgggcaccggcctggtgggcgccccggcctgcggcgacgtcatgaagct 203 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 443 aagatcgtcgacgcctgcttcaagaccttcggctgcggctccgcaatcgc 492 |||||||| |||||| ||||||| ||||||||||||||||| || ||||| Sbjct: 229 aagatcgtggacgcccgcttcaaaaccttcggctgcggctcagccatcgc 278
>gb|DQ214194.1| Taeniopygia guttata clone 0062P0003B03 nitrogen fixation cluster-like (NIFU)-like mRNA, complete sequence Length = 800 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 362 aacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagct 414 ||||| |||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 150 aacgtgggcaccggcctggtgggcgccccggcctgcggcgacgtcatgaagct 202 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 443 aagatcgtcgacgcctgcttcaagaccttcggctgcggctccgcaatcgc 492 |||||||| |||||| |||| || ||||||||||||||||| || ||||| Sbjct: 228 aagatcgtggacgcccgctttaaaaccttcggctgcggctcagccatcgc 277
>gb|DQ214193.1| Taeniopygia guttata clone 0062P0002A05 nitrogen fixation cluster-like (NIFU)-like mRNA, complete sequence Length = 1394 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 362 aacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagct 414 ||||| |||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 150 aacgtgggcaccggcctggtgggcgccccggcctgcggcgacgtcatgaagct 202 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 443 aagatcgtcgacgcctgcttcaagaccttcggctgcggctccgcaatcgc 492 |||||||| |||||| ||||||| ||||||||||||||||| || ||||| Sbjct: 228 aagatcgtggacgcccgcttcaaaaccttcggctgcggctcagccatcgc 277
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 365 gtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatc 421 ||||||||||| ||||||||||||| ||||| |||||||| ||||||||||||||| Sbjct: 319217 gtcggcaccggcatggtcggcgcgcccgcctgtggcgacgtgatgaagctgcagatc 319273 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 459 gcttcaagaccttcggctgcggctccgcaatcgc 492 |||||||||||| |||||||||||| || ||||| Sbjct: 319308 gcttcaagacctacggctgcggctcggcgatcgc 319341
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 365 gtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatc 421 ||||||||||| ||||||||||||| ||||| |||||||| ||||||||||||||| Sbjct: 78600 gtcggcaccggcatggtcggcgcgcccgcctgtggcgacgtgatgaagctgcagatc 78656 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 459 gcttcaagaccttcggctgcggctccgcaatcgc 492 |||||||||||| ||||||||||||||| ||||| Sbjct: 78691 gcttcaagacctacggctgcggctccgcgatcgc 78724
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 365 gtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatc 421 ||||||||||| ||||||||||||| ||||| |||||||| ||||||||||||||| Sbjct: 157432 gtcggcaccggcatggtcggcgcgcccgcctgtggcgacgtgatgaagctgcagatc 157488 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 459 gcttcaagaccttcggctgcggctccgcaatcgc 492 |||||||||||| |||||||||||| || ||||| Sbjct: 157523 gcttcaagacctacggctgcggctcggcgatcgc 157556
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 73.8 bits (37), Expect = 5e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 368 ggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatccgtgtc 427 |||||||| ||||||||||||| || ||||||||||| ||||||||||||||||| ||| Sbjct: 2122095 ggcaccggcatggtcggcgcgcccgcgtgcggcgacgtgatgaagctgcagatccgcgtc 2122154 Query: 428 g 428 | Sbjct: 2122155 g 2122155
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 378 tggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatc 421 |||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 1116699 tggtcggcgccccggcctgcggcgacgtgatgaagctgcagatc 1116742
>emb|BX033771.1|CNS08Y7Z Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA5BF02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 105 Score = 69.9 bits (35), Expect = 8e-09 Identities = 54/59 (91%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 362 aacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||||||||||||||||||||| || |||| |||||| ||||| |||||||||||||| Sbjct: 95 aacgtcggcaccgggctggtcggtgctccgg-ctgcggtgacgtgatgaagctgcagat 38
>emb|BX006751.1|CNS08DDF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA11BE06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 799 Score = 69.9 bits (35), Expect = 8e-09 Identities = 54/59 (91%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 362 aacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||||||||||||||||||||| || |||| |||||| ||||| |||||||||||||| Sbjct: 480 aacgtcggcaccgggctggtcggtgctccgg-ctgcggtgacgtgatgaagctgcagat 423
>gb|AE008815.1| Salmonella typhimurium LT2, section 119 of 220 of the complete genome Length = 19982 Score = 69.9 bits (35), Expect = 8e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 378 tggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 |||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 16066 tggttggcgcgccggcctgcggcgacgtcatgaagttgcagat 16024
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 69.9 bits (35), Expect = 8e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 378 tggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 |||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 2104110 tggttggcgcgccggcctgcggcgacgtgatgaagctgcagat 2104152 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 465 agaccttcggctgcggctccgcaatcgcgtcatc 498 |||||||||||||||| || |||||||| ||||| Sbjct: 1625741 agaccttcggctgcggttcggcaatcgcttcatc 1625774
>emb|AL627275.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 11/20 Length = 145050 Score = 69.9 bits (35), Expect = 8e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 378 tggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 |||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 88447 tggttggcgcgccggcctgcggcgacgtcatgaagttgcagat 88405
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 69.9 bits (35), Expect = 8e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 378 tggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 |||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 365265 tggttggcgcgccggcctgcggcgacgtcatgaagttgcagat 365307
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 69.9 bits (35), Expect = 8e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 378 tggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 |||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 359402 tggttggcgcgccggcctgcggcgacgtcatgaagttgcagat 359444
>ref|XM_363244.1| Magnaporthe grisea 70-15 hypothetical protein (MG01170.4) partial mRNA Length = 369 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 380 gtcggcgcgccggcctgcggcgacgtcatgaagctgcagatc 421 |||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 37 gtcggcgcgccggcttgcggcgacgttatgaagctgcagatc 78
>gb|AE002098.2| Neisseria meningitidis MC58, complete genome Length = 2272360 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 364 cgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatg 409 |||||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 1408395 cgtcggcaccggcatggtcggcgcgcccgcctgcggcgacgtcatg 1408440
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 365 gtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatc 421 ||||||||||| |||||||||| || || ||||||||||||||||| ||||||||| Sbjct: 3802184 gtcggcaccggcatggtcggcgcacccgcgtgcggcgacgtcatgaaactgcagatc 3802128
>ref|XM_500512.1| Yarrowia lipolytica CLIB122, YALI0B04928g predicted mRNA Length = 546 Score = 63.9 bits (32), Expect = 5e-07 Identities = 104/128 (81%) Strand = Plus / Plus Query: 293 taccacgagcgggtggtggaccactacaacaacccgcggaacgtggggtccttcgacaag 352 ||||||||| |||| ||||||||||||||||||| || |||||||| ||| | ||||| Sbjct: 109 taccacgagaaggtgctggaccactacaacaacccccgaaacgtgggatccatgaacaag 168 Query: 353 gacgaccccaacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaag 412 | ||| ||||||| || || ||||| || || || ||||| ||||| ||||||||| Sbjct: 169 aatgacgaggacgtcggaactggtctggttggagcccccgcctgtggcgatgtcatgaag 228 Query: 413 ctgcagat 420 |||||||| Sbjct: 229 ctgcagat 236
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 362 aacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgt 405 |||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 1780192 aacgtcggcaccggcatggtcggcgcgccggcatgcggcgacgt 1780235 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 461 ttcaagaccttcggctgcggctccgcaatcgc 492 |||||||||| |||||||||||| || ||||| Sbjct: 1780288 ttcaagacctacggctgcggctcggcgatcgc 1780319
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 378 tggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatc 421 |||||||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 1151837 tggtcggcgccccggcttgcggcgacgtgatgaagctgcagatc 1151880
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 63.9 bits (32), Expect = 5e-07 Identities = 104/128 (81%) Strand = Plus / Plus Query: 293 taccacgagcgggtggtggaccactacaacaacccgcggaacgtggggtccttcgacaag 352 ||||||||| |||| ||||||||||||||||||| || |||||||| ||| | ||||| Sbjct: 680391 taccacgagaaggtgctggaccactacaacaacccccgaaacgtgggatccatgaacaag 680450 Query: 353 gacgaccccaacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaag 412 | ||| ||||||| || || ||||| || || || ||||| ||||| ||||||||| Sbjct: 680451 aatgacgaggacgtcggaactggtctggttggagcccccgcctgtggcgatgtcatgaag 680510 Query: 413 ctgcagat 420 |||||||| Sbjct: 680511 ctgcagat 680518
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 326 ccgcggaacgtggggtccttcgacaaggacgaccccaacgtcggcaccgggctggtcggc 385 ||||| |||||||| ||||| ||||| ||||| |||||||||| ||| |||| || Sbjct: 2928431 ccgcgtaacgtgggttcctttgacaacaacgacgagaacgtcggcagcggcatggtgggt 2928372 Query: 386 gcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||||||||| |||||||| |||||| ||||||| Sbjct: 2928371 gcgccggcctgtggcgacgtgatgaagttgcagat 2928337
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 378 tggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 |||| ||||| |||||||||||||||||||||||| ||||||| Sbjct: 2702025 tggttggcgctccggcctgcggcgacgtcatgaagttgcagat 2701983
>gb|AF428267.1|AF428267 Chlamydomonas reinhardtii iron-sulfur cluster assembly protein IscU mRNA, complete cds; nuclear gene for mitochondrial product Length = 1109 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 344 ttcgacaaggacgaccccaacgtcggcaccgggctggtcggcgcgccggcctgcggcgac 403 ||||||||| ||||||| |||| |||||||| || || ||||| || || |||||||| Sbjct: 226 ttcgacaagagcgaccccgacgttggcaccggcctcgtgggcgctcctgcatgcggcgat 285 Query: 404 gtcatgaagctgca 417 |||||||||||||| Sbjct: 286 gtcatgaagctgca 299
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 364 cgtcggcaccgggctggtcggcgcgccggcctgcggcgacgt 405 |||||||||||| ||||||||||||| |||||||||||||| Sbjct: 622766 cgtcggcaccggcatggtcggcgcgcccgcctgcggcgacgt 622725
>ref|XM_415182.1| PREDICTED: Gallus gallus similar to ISCU2 (LOC416891), mRNA Length = 686 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 362 aacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcag 418 ||||| ||||| || ||||| ||||| ||||||||||| ||||| |||||||||||| Sbjct: 232 aacgtgggcacgggcctggtgggcgccccggcctgcggggacgtgatgaagctgcag 288
>emb|AL162756.2|NMA5Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 5/7 Length = 329861 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 365 gtcggcaccgggctggtcggcgcgccggcctgcggcgacgt 405 ||||||||||| |||||||||| ||||||||||||||||| Sbjct: 170328 gtcggcaccggcatggtcggcgcaccggcctgcggcgacgt 170368
>emb|CR707026.2|CNS0G8HQ Tetraodon nigroviridis full-length cDNA Length = 906 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 374 gggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 |||||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 204 gggctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 250
>emb|CR690389.2|CNS0FVNL Tetraodon nigroviridis full-length cDNA Length = 884 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 374 gggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 |||||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 170 gggctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 216
>gb|AF010139.1|AF010139 Azotobacter vinelandii iron-sulfur cluster assembly gene cluster, suhB, cysE2, iscS, iscU, iscA, hscB, hscA and fdx genes complete cds; ndk gene, partial cds Length = 7886 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 356 gaccccaacgtcggcaccgggctggtcggcgcgccggcctgcggcgacgt 405 |||||| ||||||||||||| |||| ||||| || |||||||||||||| Sbjct: 4058 gaccccgacgtcggcaccggcatggtgggcgcccccgcctgcggcgacgt 4107
>ref|NM_110967.1| Arabidopsis thaliana ATISU2/ISU2; structural molecule AT3G01020 (ATISU2/ISU2) mRNA, complete cds Length = 492 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 461 ttcaagaccttcggctgcggctccgcaatcgcgtcatcctccgtcgctaccgaatgg 517 ||||||||||| ||||| |||||||| ||||| ||||| ||||| ||| | |||||| Sbjct: 244 ttcaagacctttggctgtggctccgctatcgcctcatcttccgttgcttctgaatgg 300
>gb|AY441146.1| Armigeres subalbatus ASAP ID: 39637 iron-sulfur cluster assembly IscU mRNA sequence Length = 710 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 365 gtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgca 417 ||||| ||||| |||||||| || ||||| || || ||||||||||||||||| Sbjct: 285 gtcggaaccggactggtcggtgctccggcttgtggtgacgtcatgaagctgca 337
>ref|XM_970538.1| PREDICTED: Tribolium castaneum similar to CG9836-PA (LOC664540), mRNA Length = 585 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 389 ccggcctgcggcgacgtcatgaagctgca 417 |||||||||||||||||||||||| |||| Sbjct: 185 ccggcctgcggcgacgtcatgaagttgca 213
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 365 gtcggcaccgggctggtcggcgcgccggcctgcggcgacgt 405 ||||||||||| |||||||||| || |||||||||||||| Sbjct: 5717278 gtcggcaccggcatggtcggcgctcctgcctgcggcgacgt 5717238
>gb|DQ056583.1| Arabidopsis thaliana putative iron-sulfur cluster assembly complex protein (At3g01020) mRNA, complete cds Length = 492 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 461 ttcaagaccttcggctgcggctccgcaatcgcgtcatcctccgtcgctaccgaatgg 517 ||||||||||| ||||| |||||||| ||||| ||||| ||||| ||| | |||||| Sbjct: 244 ttcaagacctttggctgtggctccgctatcgcctcatcttccgttgcttctgaatgg 300
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 365 gtcggcaccgggctggtcggcgcgccggcctgcggcgacgt 405 ||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 979888 gtcggcaccggcatggtcggcgccccggcctgcggtgacgt 979928
>emb|AJ866968.1| Arabidopsis thaliana mRNA for Fe-S scaffold protein 3 (isu3 gene) Length = 684 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 461 ttcaagaccttcggctgcggctccgcaatcgcgtcatcctccgtcgctaccgaatgg 517 ||||||||||| ||||| |||||||| ||||| ||||| ||||| ||| | |||||| Sbjct: 279 ttcaagacctttggctgtggctccgctatcgcctcatcttccgttgcttctgaatgg 335
>ref|NM_005986.2| Homo sapiens SRY (sex determining region Y)-box 1 (SOX1), mRNA Length = 4108 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 255 gggccgcgccggggctggcggcggcgggggcg 286 ||||| ||||||||| |||||||||||||||| Sbjct: 129 gggccccgccggggcgggcggcggcgggggcg 160
>gb|AC008261.5|ATAC008261 Arabidopsis thaliana chromosome III BAC T4P13 genomic sequence, complete sequence Length = 93735 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Minus Query: 461 ttcaagaccttcggctgcggctccgcaatcgcgtcatcctccgt 504 ||||||||||| ||||| |||||||| ||||| ||||| ||||| Sbjct: 91783 ttcaagacctttggctgtggctccgctatcgcctcatcttccgt 91740
>ref|XM_806818.1| Trypanosoma cruzi strain CL Brener iron-sulfur cluster assembly protein (Tc00.1047053507009.90) partial mRNA Length = 492 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 304 ggtggtggaccactacaacaacccgcggaacgtggg 339 ||||| |||||||||||||||||| |||||| |||| Sbjct: 75 ggtggaggaccactacaacaacccccggaacatggg 110
>ref|XM_808041.1| Trypanosoma cruzi strain CL Brener iron-sulfur cluster assembly protein (Tc00.1047053510667.70) partial mRNA Length = 492 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 304 ggtggtggaccactacaacaacccgcggaacgtggg 339 ||||| |||||||||||||||||| |||||| |||| Sbjct: 75 ggtggaggaccactacaacaacccccggaacatggg 110
>emb|CR734094.2|CNS0GT7H Tetraodon nigroviridis full-length cDNA Length = 892 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 182 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 225
>emb|CR733709.2|CNS0GSWS Tetraodon nigroviridis full-length cDNA Length = 920 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 211 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 254
>emb|CR712207.2|CNS0GCHN Tetraodon nigroviridis full-length cDNA Length = 893 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 187 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 230
>emb|CR725852.2|CNS0GN0I Tetraodon nigroviridis full-length cDNA Length = 902 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 210 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 253
>emb|CR716308.2|CNS0GFNH Tetraodon nigroviridis full-length cDNA Length = 920 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 216 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 259
>emb|CR712385.2|CNS0GCML Tetraodon nigroviridis full-length cDNA Length = 883 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 182 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 225
>emb|CR714227.1|CNS0GE1R Tetraodon nigroviridis full-length cDNA Length = 892 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 188 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 231
>emb|CR710203.2|CNS0GAXZ Tetraodon nigroviridis full-length cDNA Length = 885 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 174 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 217
>emb|CR710151.2|CNS0GAWJ Tetraodon nigroviridis full-length cDNA Length = 898 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 193 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 236
>emb|CR709667.2|CNS0GAJ3 Tetraodon nigroviridis full-length cDNA Length = 901 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 198 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 241
>emb|CR708456.2|CNS0G9LG Tetraodon nigroviridis full-length cDNA Length = 885 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 184 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 227
>emb|CR708218.2|CNS0G9EU Tetraodon nigroviridis full-length cDNA Length = 886 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 174 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 217
>emb|CR705860.2|CNS0G7LC Tetraodon nigroviridis full-length cDNA Length = 912 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 200 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 243
>emb|CR705333.2|CNS0G76P Tetraodon nigroviridis full-length cDNA Length = 911 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 199 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 242
>emb|CR704367.2|CNS0G6FV Tetraodon nigroviridis full-length cDNA Length = 883 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 179 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 222
>emb|CR704270.2|CNS0G6D6 Tetraodon nigroviridis full-length cDNA Length = 870 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 181 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 224
>emb|CR702717.2|CNS0G561 Tetraodon nigroviridis full-length cDNA Length = 869 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 181 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 224
>emb|CR701907.2|CNS0G4JJ Tetraodon nigroviridis full-length cDNA Length = 955 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 243 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 286
>emb|CR700690.2|CNS0G3LQ Tetraodon nigroviridis full-length cDNA Length = 901 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 193 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 236
>emb|CR700100.2|CNS0G35C Tetraodon nigroviridis full-length cDNA Length = 898 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 186 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 229
>emb|CR691369.2|CNS0FWET Tetraodon nigroviridis full-length cDNA Length = 870 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 181 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 224
>emb|CR696913.2|CNS0G0OT Tetraodon nigroviridis full-length cDNA Length = 881 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 179 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 222
>emb|CR696722.2|CNS0G0JI Tetraodon nigroviridis full-length cDNA Length = 855 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 143 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 186
>emb|CR696464.2|CNS0G0CC Tetraodon nigroviridis full-length cDNA Length = 895 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 184 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 227
>emb|CR696214.2|CNS0G05E Tetraodon nigroviridis full-length cDNA Length = 907 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 199 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 242
>emb|CR695899.2|CNS0FZWN Tetraodon nigroviridis full-length cDNA Length = 891 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 181 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 224
>emb|CR695443.2|CNS0FZJZ Tetraodon nigroviridis full-length cDNA Length = 910 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 200 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 243
>emb|CR694602.2|CNS0FYWM Tetraodon nigroviridis full-length cDNA Length = 937 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 226 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 269
>emb|CR694368.2|CNS0FYQ4 Tetraodon nigroviridis full-length cDNA Length = 868 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 180 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 223
>emb|CR693956.2|CNS0FYEO Tetraodon nigroviridis full-length cDNA Length = 915 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 205 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 248
>emb|CR693856.2|CNS0FYBW Tetraodon nigroviridis full-length cDNA Length = 894 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 184 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 227
>emb|CR693806.2|CNS0FYAI Tetraodon nigroviridis full-length cDNA Length = 889 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 179 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 222
>emb|CR692981.2|CNS0FXNL Tetraodon nigroviridis full-length cDNA Length = 922 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 211 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 254
>emb|CR692937.2|CNS0FXMD Tetraodon nigroviridis full-length cDNA Length = 894 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 184 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 227
>emb|CR692695.2|CNS0FXFN Tetraodon nigroviridis full-length cDNA Length = 917 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 205 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 248
>emb|CR692472.2|CNS0FX9G Tetraodon nigroviridis full-length cDNA Length = 896 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 184 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 227
>emb|CR691792.2|CNS0FWQK Tetraodon nigroviridis full-length cDNA Length = 873 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 182 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 225
>emb|CR691468.2|CNS0FWHK Tetraodon nigroviridis full-length cDNA Length = 896 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 184 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 227
>emb|CR690529.2|CNS0FVRH Tetraodon nigroviridis full-length cDNA Length = 936 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 225 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 268
>emb|CR689785.2|CNS0FV6T Tetraodon nigroviridis full-length cDNA Length = 921 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 211 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 254
>emb|CR689031.2|CNS0FULV Tetraodon nigroviridis full-length cDNA Length = 889 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 179 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 222
>emb|CR688729.2|CNS0FUDH Tetraodon nigroviridis full-length cDNA Length = 938 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 225 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 268
>emb|CR688361.1|CNS0FU39 Tetraodon nigroviridis full-length cDNA Length = 923 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 215 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 258
>emb|CR685191.2|CNS0FRN7 Tetraodon nigroviridis full-length cDNA Length = 894 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 182 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 225
>emb|CR684475.2|CNS0FR3B Tetraodon nigroviridis full-length cDNA Length = 911 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 200 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 243
>emb|CR684368.2|CNS0FR0C Tetraodon nigroviridis full-length cDNA Length = 903 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 201 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 244
>emb|CR684169.2|CNS0FQUT Tetraodon nigroviridis full-length cDNA Length = 899 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 199 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 242
>emb|CR683854.2|CNS0FQM2 Tetraodon nigroviridis full-length cDNA Length = 885 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 175 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 218
>emb|CR683823.2|CNS0FQL7 Tetraodon nigroviridis full-length cDNA Length = 921 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 211 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 254
>emb|CR683295.2|CNS0FQ6J Tetraodon nigroviridis full-length cDNA Length = 938 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 226 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 269
>emb|CR682851.2|CNS0FPU7 Tetraodon nigroviridis full-length cDNA Length = 793 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 81 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 124
>emb|CR637476.2|CNS0EQUI Tetraodon nigroviridis full-length cDNA Length = 894 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagat 420 ||||| ||||| |||||||| || ||||||||||| |||||||| Sbjct: 182 ctggtgggcgctccggcctgtggagacgtcatgaaactgcagat 225
>emb|AL138691.15| Human DNA sequence from clone RP11-310D8 on chromosome 13 Contains the SOX1 gene for SRY (sex determining region Y)-box 1 protein and 7 CpG islands, complete sequence Length = 147665 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 255 gggccgcgccggggctggcggcggcgggggcg 286 ||||| ||||||||| |||||||||||||||| Sbjct: 15779 gggccccgccggggcgggcggcggcgggggcg 15748
>emb|Y13436.1|HSSOX1 Homo sapiens sox1 gene Length = 4091 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 255 gggccgcgccggggctggcggcggcgggggcg 286 ||||| ||||||||| |||||||||||||||| Sbjct: 129 gggccccgccggggcgggcggcggcgggggcg 160
>gb|U26427.1|ABU26427 Azospirillum brasilense ATP-binding protein, nifU, nifS, and nifV genes, complete cds; and unknown gene Length = 5115 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 460 cttcaagaccttcggctgcggctccgcaatcgcgtc 495 |||| ||||||||||||||||||| || |||||||| Sbjct: 957 cttccagaccttcggctgcggctcggccatcgcgtc 992
>ref|XM_954945.1| Neurospora crassa OR74A hypothetical protein (NCU05778.1) partial mRNA Length = 558 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 461 ttcaagaccttcggctgcggctc 483 ||||||||||||||||||||||| Sbjct: 289 ttcaagaccttcggctgcggctc 311
>ref|XM_325632.1| Neurospora crassa OR74A hypothetical protein (NCU05778.1) partial mRNA Length = 558 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 461 ttcaagaccttcggctgcggctc 483 ||||||||||||||||||||||| Sbjct: 289 ttcaagaccttcggctgcggctc 311
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 363 acgtcggcaccgggctggtcggcgcgccggcctgcggcgacgt 405 ||||||||||||| |||||||||| || || ||||||||||| Sbjct: 1396144 acgtcggcaccggcatggtcggcgctcctgcgtgcggcgacgt 1396186
>gb|L34354.1|AZSNIFU Azospirillum brasilense nitrogen fixation protein (nifU) gene, complete cds Length = 924 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 465 agaccttcggctgcggctccgcaatcgcgtc 495 ||||||||||||||||||| || |||||||| Sbjct: 173 agaccttcggctgcggctcggccatcgcgtc 203
>gb|M60090.1|AVINIFREG Azotobacter chroococcum nifU, nifS, nifV, nifP, nifW, nifZ and nifM genes, complete cds Length = 7099 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 459 gcttcaagaccttcggctgcggctccgcaatcgcgtcatcctc 501 ||||| ||||||||||||| |||||||| ||||| || ||||| Sbjct: 515 gcttccagaccttcggctgtggctccgccatcgcttcctcctc 557
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 310 ggaccactacaacaacccgcggaacgtggg 339 |||||||||||| |||||||| |||||||| Sbjct: 1467562 ggaccactacaagaacccgcgcaacgtggg 1467533
>ref|XM_838374.1| Leishmania major strain Friedlin iron-sulfur cluster assembly protein (LMJ_1291) partial mRNA Length = 486 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 310 ggaccactacaacaacccgcggaacgtggg 339 |||||||||||| |||||||| |||||||| Sbjct: 75 ggaccactacaagaacccgcgcaacgtggg 104
>ref|XM_382800.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02624.1) partial mRNA Length = 636 Score = 44.1 bits (22), Expect = 0.45 Identities = 55/66 (83%) Strand = Plus / Plus Query: 365 gtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatccgt 424 ||||| ||||| || ||||| || || ||||| ||||| ||||||||||| ||||| || Sbjct: 199 gtcggtaccggtcttgtcggtgctcccgcctgtggcgatgtcatgaagcttcagattcgc 258 Query: 425 gtcgac 430 |||||| Sbjct: 259 gtcgac 264
>ref|XM_846306.1| PREDICTED: Canis familiaris similar to Cytohesin 3 (ARF nucleotide-binding site opener 3) (ARNO3 protein) (General receptor of phosphoinositides 1) (Grp1) (CLM-3) (LOC609100), mRNA Length = 1731 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 ggcggcggcgggggcgagggcg 292 |||||||||||||||||||||| Sbjct: 538 ggcggcggcgggggcgagggcg 559
>emb|CR709794.2|CNS0GAMM Tetraodon nigroviridis full-length cDNA Length = 897 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcag 418 ||||| ||||| |||||||| || ||||||||||| |||||| Sbjct: 214 ctggtgggcgctccggcctgtggagacgtcatgaaactgcag 255
>emb|CR706222.2|CNS0G7VE Tetraodon nigroviridis full-length cDNA Length = 901 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Plus Query: 377 ctggtcggcgcgccggcctgcggcgacgtcatgaagctgcag 418 ||||| ||||| |||||||| || ||||||||||| |||||| Sbjct: 216 ctggtgggcgctccggcctgtggagacgtcatgaaactgcag 257
>emb|AL583828.4| Human DNA sequence from clone RP11-501I19 on chromosome 6 Contains a novel gene (ortholog of human ADG-90), the 5' end of a novel gene (FLJ20330), a novel gene, a ribosomal protein s4x (Rps4x) pseudogene and three CpG islands, complete sequence Length = 124659 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 263 ccggggctggcggcggcgggggcgagggcg 292 |||| ||||||||||||||||||| ||||| Sbjct: 43425 ccggagctggcggcggcgggggcgggggcg 43396
>ref|NM_141583.2| Drosophila melanogaster CG9836-RA (CG9836), mRNA Length = 958 Score = 44.1 bits (22), Expect = 0.45 Identities = 46/54 (85%) Strand = Plus / Plus Query: 368 ggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatc 421 |||||||| ||||||| || || ||||||||||| || ||||| ||||||||| Sbjct: 253 ggcaccggcttggtcggagcaccagcctgcggcgatgtgatgaaactgcagatc 306
>gb|AY060228.1| Drosophila melanogaster GH01635 full length cDNA Length = 960 Score = 44.1 bits (22), Expect = 0.45 Identities = 46/54 (85%) Strand = Plus / Plus Query: 368 ggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatc 421 |||||||| ||||||| || || ||||||||||| || ||||| ||||||||| Sbjct: 241 ggcaccggcttggtcggagcaccagcctgcggcgatgtgatgaaactgcagatc 294
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 44.1 bits (22), Expect = 0.45 Identities = 49/58 (84%) Strand = Plus / Minus Query: 365 gtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatcc 422 ||||| |||||||| || ||||||||||| || |||||||| ||| |||||||||| Sbjct: 549874 gtcgggaccgggctcgtgggcgcgccggcgtgtggcgacgtgatgcgcctgcagatcc 549817
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 ggcggcggcgggggcgagggcgtacc 296 ||||||||||| |||||||||||||| Sbjct: 4831645 ggcggcggcggcggcgagggcgtacc 4831620
>gb|AC008314.7|AC008314 Drosophila melanogaster, chromosome 3R, region 85B-85B, BAC clone BACR02B21, complete sequence Length = 186322 Score = 44.1 bits (22), Expect = 0.45 Identities = 46/54 (85%) Strand = Plus / Minus Query: 368 ggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatc 421 |||||||| ||||||| || || ||||||||||| || ||||| ||||||||| Sbjct: 122077 ggcaccggcttggtcggagcaccagcctgcggcgatgtgatgaaactgcagatc 122024
>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_B01 Length = 129329 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 ggcggcggcgggggcgagggcgtacc 296 ||||||||||| |||||||||||||| Sbjct: 112235 ggcggcggcggcggcgagggcgtacc 112210
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1073_F05 Length = 124252 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 ggcggcggcgggggcgagggcgtacc 296 ||||||||||| |||||||||||||| Sbjct: 73804 ggcggcggcggcggcgagggcgtacc 73779
>gb|AC010305.3|AC010305 Homo sapiens chromosome 16 clone CTB-45A8, complete sequence Length = 121575 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 263 ccggggctggcggcggcgggggcgagggcg 292 |||| ||||||||||||||||||| ||||| Sbjct: 79092 ccggagctggcggcggcgggggcgggggcg 79121
>ref|NM_208867.1| Eremothecium gossypii ACR112Cp (ACR112C), mRNA Length = 465 Score = 44.1 bits (22), Expect = 0.45 Identities = 49/58 (84%) Strand = Plus / Plus Query: 365 gtcggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatcc 422 ||||| |||||||| || ||||||||||| || |||||||| ||| |||||||||| Sbjct: 145 gtcgggaccgggctcgtgggcgcgccggcgtgtggcgacgtgatgcgcctgcagatcc 202
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 368 ggcaccgggctggtcggcgcgccggcctgcggcgacgt 405 |||||||| |||||||||| ||||||||||| ||||| Sbjct: 1063189 ggcaccggcatggtcggcgccccggcctgcggtgacgt 1063226
>gb|AE003680.4| Drosophila melanogaster chromosome 3R, section 18 of 118 of the complete sequence Length = 270517 Score = 44.1 bits (22), Expect = 0.45 Identities = 46/54 (85%) Strand = Plus / Minus Query: 368 ggcaccgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatc 421 |||||||| ||||||| || || ||||||||||| || ||||| ||||||||| Sbjct: 162939 ggcaccggcttggtcggagcaccagcctgcggcgatgtgatgaaactgcagatc 162886
>gb|AC004156.1|AC004156 Homo sapiens chromosome 19, cosmid R33586, complete sequence Length = 41702 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 ggcggcggcgggggcgagggcg 292 |||||||||||||||||||||| Sbjct: 32033 ggcggcggcgggggcgagggcg 32054
>ref|XM_520210.1| PREDICTED: Pan troglodytes similar to CASK-interacting protein CIP98; 1110035G07Rik (LOC464683), mRNA Length = 7851 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 262 gccggggctggcggcggcgggggcg 286 |||||||| |||||||||||||||| Sbjct: 739 gccggggcgggcggcggcgggggcg 763
>ref|NM_015404.1| Homo sapiens deafness, autosomal recessive 31 (DFNB31), mRNA Length = 4022 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 262 gccggggctggcggcggcgggggcg 286 |||||||| |||||||||||||||| Sbjct: 688 gccggggcgggcggcggcgggggcg 712
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 478 cggctccgcaatcgcgtcatc 498 ||||||||||||||||||||| Sbjct: 71447 cggctccgcaatcgcgtcatc 71467
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 365 gtcggcaccgggctggtcggcgcgccggcctgcggcgacgt 405 |||||||| || |||||||||| ||||| ||||||||||| Sbjct: 5210909 gtcggcactggcatggtcggcgctccggcgtgcggcgacgt 5210869
>gb|BC014524.1| Homo sapiens deafness, autosomal recessive 31, mRNA (cDNA clone IMAGE:3834205) Length = 4569 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 262 gccggggctggcggcggcgggggcg 286 |||||||| |||||||||||||||| Sbjct: 1219 gccggggcgggcggcggcgggggcg 1243
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 461 ttcaagaccttcggctgcggctccgcaat 489 |||||||||| |||||||||||| ||||| Sbjct: 1564481 ttcaagacctacggctgcggctcggcaat 1564509
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 365 gtcggcaccgggctggtcggcgcgccggcctgcggcgacgt 405 ||||||||||| |||||||||| || || ||||||||||| Sbjct: 1521569 gtcggcaccggcatggtcggcgctccagcgtgcggcgacgt 1521609
>ref|XM_844146.1| PREDICTED: Canis familiaris similar to SRY (sex determining region Y)-box 1 (LOC607464), mRNA Length = 1212 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 262 gccggggctggcggcggcgggggcg 286 |||||||| |||||||||||||||| Sbjct: 76 gccggggccggcggcggcgggggcg 100
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 agtttgttggcgatgttgcgc 190 ||||||||||||||||||||| Sbjct: 2003999 agtttgttggcgatgttgcgc 2003979
>emb|AL356073.15| Human DNA sequence from clone RP11-813O3 on chromosome 10, complete sequence Length = 165917 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 tttgcctcccctctttttccc 111 ||||||||||||||||||||| Sbjct: 18376 tttgcctcccctctttttccc 18356
>emb|AL138895.16| Human DNA sequence from clone RP11-9M16 on chromosome 9 Contains a novel gene (DKFZP434N014), a novel gene and two CpG islands, complete sequence Length = 132292 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 262 gccggggctggcggcggcgggggcg 286 |||||||| |||||||||||||||| Sbjct: 111246 gccggggcgggcggcggcgggggcg 111222
>emb|X12600.1|KPNIFXUS Klebsiella pneumoniae nifX, nifU, nifS, nifV and nifW genes Length = 4160 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 459 gcttcaagaccttcggctgcggctccgcaatcgcgtcatcctccg 503 ||||| ||||||||||||||||| ||| ||||| || ||||||| Sbjct: 844 gcttccagaccttcggctgcggcagcgccatcgcctcctcctccg 888
>emb|X13303.1|KPNIF Klebsiella pneumoniae DNA for nif gene cluster Length = 24206 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 459 gcttcaagaccttcggctgcggctccgcaatcgcgtcatcctccg 503 ||||| ||||||||||||||||| ||| ||||| || ||||||| Sbjct: 12983 gcttccagaccttcggctgcggcagcgccatcgcctcctcctccg 13027
>dbj|AK056190.1| Homo sapiens cDNA FLJ31628 fis, clone NT2RI2003344, weakly similar to PRESYNAPTIC PROTEIN SAP97 Length = 1718 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 262 gccggggctggcggcggcgggggcg 286 |||||||| |||||||||||||||| Sbjct: 713 gccggggcgggcggcggcgggggcg 737
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 267 ggctggcggcggcgggggcgagggc 291 ||||||||||||||| ||||||||| Sbjct: 5227524 ggctggcggcggcggcggcgagggc 5227500 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 cggggctggcggcggcggggg 284 ||||||||||||||||||||| Sbjct: 3807709 cggggctggcggcggcggggg 3807689
>dbj|AK086594.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930039F22 product:stromal interaction molecule 1, full insert sequence Length = 2506 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 cgccggggctggcggcggcgg 281 ||||||||||||||||||||| Sbjct: 379 cgccggggctggcggcggcgg 359
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 ggcggcggcgggggcgagggc 291 ||||||||||||||||||||| Sbjct: 3907994 ggcggcggcgggggcgagggc 3908014
>gb|M17350.1|KPNUSV K.pneumoniae nitrogen fixation genes nifU, nifS, nifV, complete cds Length = 3495 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 459 gcttcaagaccttcggctgcggctccgcaatcgcgtcatcctccg 503 ||||| ||||||||||||||||| ||| ||||| || ||||||| Sbjct: 367 gcttccagaccttcggctgcggcagcgccatcgcctcctcctccg 411
>dbj|AB040959.1| Homo sapiens mRNA for KIAA1526 protein, partial cds Length = 3566 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 262 gccggggctggcggcggcgggggcg 286 |||||||| |||||||||||||||| Sbjct: 233 gccggggcgggcggcggcgggggcg 257
>ref|XM_550266.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1524 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 ggcggcggcgggggcgagggcgta 294 ||||||| |||||||||||||||| Sbjct: 681 ggcggcgtcgggggcgagggcgta 658
>ref|XM_470726.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1908 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 ggcggcggcgggggcgaggg 290 |||||||||||||||||||| Sbjct: 46 ggcggcggcgggggcgaggg 27
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 ggctggcggcggcgggggcg 286 |||||||||||||||||||| Sbjct: 1469960 ggctggcggcggcgggggcg 1469941
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 259 cgcgccggggctggcggcggcgggggcg 286 |||| |||||| |||||||||||||||| Sbjct: 414250 cgcggcggggcgggcggcggcgggggcg 414277
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence Length = 1653225 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cgggaggaagccggctcgtc 211 |||||||||||||||||||| Sbjct: 1301452 cgggaggaagccggctcgtc 1301433
>gb|AC091483.6| Trypanosoma brucei chromosome 3 clone RPCI93-48K5, complete sequence Length = 161296 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cgggaggaagccggctcgtc 211 |||||||||||||||||||| Sbjct: 27164 cgggaggaagccggctcgtc 27145
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 gctggcggcggcgggggcga 287 |||||||||||||||||||| Sbjct: 2494741 gctggcggcggcgggggcga 2494722 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gccgcgccggggctggcggc 276 |||||||||||||||||||| Sbjct: 1171891 gccgcgccggggctggcggc 1171872
>ref|XM_591818.2| PREDICTED: Bos taurus similar to cadherin 22 precursor (LOC540147), mRNA Length = 3394 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ggcggcggcgggggcgaggg 290 |||||||||||||||||||| Sbjct: 2686 ggcggcggcgggggcgaggg 2705
>ref|XM_958872.1| Neurospora crassa OR74A hypothetical protein (NCU00845.1) partial mRNA Length = 1344 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 ccggatcgccacctcttccg 51 |||||||||||||||||||| Sbjct: 732 ccggatcgccacctcttccg 751
>ref|XM_325024.1| Neurospora crassa OR74A hypothetical protein (NCU00845.1) partial mRNA Length = 1344 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 ccggatcgccacctcttccg 51 |||||||||||||||||||| Sbjct: 732 ccggatcgccacctcttccg 751
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 374 gggctggtcggcgcgccggcctgcggcgacgtcatgaagctgca 417 |||||||| |||||||| | || |||||||| ||||||||||| Sbjct: 597908 gggctggtaggcgcgcctgagtgtggcgacgtgatgaagctgca 597865
>ref|NM_006236.1| Homo sapiens POU domain, class 3, transcription factor 3 (POU3F3), mRNA Length = 1503 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 ggggctggcggcggcggggg 284 |||||||||||||||||||| Sbjct: 82 ggggctggcggcggcggggg 101
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 ggcggcggcgggggcgaggg 290 |||||||||||||||||||| Sbjct: 14776804 ggcggcggcgggggcgaggg 14776785
>ref|XM_847336.1| PREDICTED: Canis familiaris similar to Homeobox protein Hox-D11 (Hox-4F) (LOC609973), mRNA Length = 1456 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 ggggctggcggcggcggggg 284 |||||||||||||||||||| Sbjct: 646 ggggctggcggcggcggggg 665
>ref|XR_002529.1| PREDICTED: Mus musculus similar to AT rich interactive domain 1A isoform a (LOC669477), mRNA Length = 7992 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 gctggcggcggcgggggcga 287 |||||||||||||||||||| Sbjct: 33 gctggcggcggcgggggcga 14
>ref|XM_992330.1| PREDICTED: Mus musculus AT rich interactive domain 1A (Swi1 like), transcript variant 2 (Arid1a), mRNA Length = 7524 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 gctggcggcggcgggggcga 287 |||||||||||||||||||| Sbjct: 33 gctggcggcggcgggggcga 14
>ref|XM_992362.1| PREDICTED: Mus musculus AT rich interactive domain 1A (Swi1 like), transcript variant 3 (Arid1a), mRNA Length = 8175 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 gctggcggcggcgggggcga 287 |||||||||||||||||||| Sbjct: 33 gctggcggcggcgggggcga 14
>ref|XM_986119.1| PREDICTED: Mus musculus similar to AT rich interactive domain 1A isoform a (LOC675933), mRNA Length = 7416 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 gctggcggcggcgggggcga 287 |||||||||||||||||||| Sbjct: 33 gctggcggcggcgggggcga 14
>ref|XM_756287.1| Ustilago maydis 521 hypothetical protein (UM05233.1) partial mRNA Length = 2973 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 acaaggacgaccccaacgtc 367 |||||||||||||||||||| Sbjct: 665 acaaggacgaccccaacgtc 684
>ref|XM_821443.1| Trypanosoma brucei TREU927 clone RPCI93-48K5 hypothetical protein (Tb927.3.4610) partial mRNA Length = 9306 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 cgggaggaagccggctcgtc 211 |||||||||||||||||||| Sbjct: 1385 cgggaggaagccggctcgtc 1404
>ref|XM_744546.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g05080) partial mRNA Length = 3834 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tggcggcggcgggggcgagg 289 |||||||||||||||||||| Sbjct: 492 tggcggcggcgggggcgagg 473
>gb|AC142381.2| Homo sapiens chromosome 16 clone RP11-1166P10, complete sequence Length = 211171 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 gggctggcggcggcgggggc 285 |||||||||||||||||||| Sbjct: 75447 gggctggcggcggcgggggc 75466
>ref|XM_567741.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNK01410) partial mRNA Length = 3652 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 259 cgcgccggggctggcggcggcgggggcg 286 |||| |||||| |||||||||||||||| Sbjct: 423 cgcggcggggcgggcggcggcgggggcg 396
>ref|XM_447881.1| Candida glabrata CBS138, CAGL0J04048g partial mRNA Length = 438 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 461 ttcaagaccttcggctgcggctccgcaatcgc 492 |||||||| ||||||||||| ||||| ||||| Sbjct: 214 ttcaagacattcggctgcgggtccgccatcgc 245
>emb|CR715424.2|CNS0GEZ0 Tetraodon nigroviridis full-length cDNA Length = 613 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 378 tggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatc 421 |||| ||||| || ||||||||||| || |||||||| |||||| Sbjct: 181 tggtgggcgcaccagcctgcggcgatgttatgaagcttcagatc 224
>ref|XM_860856.1| PREDICTED: Canis familiaris similar to AT rich interactive domain 1A (SWI- like) isoform c, transcript variant 3 (LOC487352), mRNA Length = 7836 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 gctggcggcggcgggggcga 287 |||||||||||||||||||| Sbjct: 402 gctggcggcggcgggggcga 383
>ref|XM_860834.1| PREDICTED: Canis familiaris similar to AT rich interactive domain 1A (SWI- like) isoform c, transcript variant 2 (LOC487352), mRNA Length = 7595 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 gctggcggcggcgggggcga 287 |||||||||||||||||||| Sbjct: 402 gctggcggcggcgggggcga 383
>ref|XM_847453.1| PREDICTED: Canis familiaris similar to AT rich interactive domain 1A (SWI- like) isoform c, transcript variant 1 (LOC487352), mRNA Length = 8487 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 gctggcggcggcgggggcga 287 |||||||||||||||||||| Sbjct: 402 gctggcggcggcgggggcga 383
>emb|CR662836.2|CNS0FAEY Tetraodon nigroviridis full-length cDNA Length = 613 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 378 tggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatc 421 |||| ||||| || ||||||||||| || |||||||| |||||| Sbjct: 200 tggtgggcgcaccagcctgcggcgatgttatgaagcttcagatc 243
>ref|NM_006015.3| Homo sapiens AT rich interactive domain 1A (SWI- like) (ARID1A), transcript variant 1, mRNA Length = 8595 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 gctggcggcggcgggggcga 287 |||||||||||||||||||| Sbjct: 403 gctggcggcggcgggggcga 384
>ref|NM_139135.1| Homo sapiens AT rich interactive domain 1A (SWI- like) (ARID1A), transcript variant 2, mRNA Length = 7944 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 gctggcggcggcgggggcga 287 |||||||||||||||||||| Sbjct: 403 gctggcggcggcgggggcga 384
>gb|AY597275.1| Pseudomonas viridiflava strain ME3.1b pathogenicity island PAI-Region-1, complete sequence Length = 40359 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 378 tggtcggcgcgccggcctgcggcgacgt 405 |||||||||| ||||| ||||||||||| Sbjct: 911 tggtcggcgctccggcgtgcggcgacgt 884
>emb|AL512408.12| Human DNA sequence from clone RP5-968P14 on chromosome 1 Contains the 5' end of the SMARCF1 gene for SWI/SNF related, matrix associated, actin dependent regulator of chromatin (subfamily f, member 1) and a CpG island, complete sequence Length = 64214 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 gctggcggcggcgggggcga 287 |||||||||||||||||||| Sbjct: 44361 gctggcggcggcgggggcga 44380
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 gccggggctggcggcggcgggggc 285 |||||||||||||||||| ||||| Sbjct: 3030267 gccggggctggcggcggcaggggc 3030290 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 398 ggcgacgtcatgaagctgcagatc 421 |||||||| ||||||||||||||| Sbjct: 2275741 ggcgacgtgatgaagctgcagatc 2275764
>emb|AL359085.14| Human DNA sequence from clone RP11-113J24 on chromosome 13 Contains the 5' end of a novel gene, a novel gene (FLJ14624 FLJ31847), the 5' end of a novel gene (FLJ22153), COX5B (cytochrome c oxidase subunit Vb) pseudogene and two CpG islands, complete sequence Length = 152794 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 ccggcgcttcctcggcccgggcgc 246 |||||||| ||||||||||||||| Sbjct: 87476 ccggcgctccctcggcccgggcgc 87453
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 ccgggaagatcgtcgacgcc 457 |||||||||||||||||||| Sbjct: 985215 ccgggaagatcgtcgacgcc 985196
>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence Length = 1192501 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 461 ttcaagaccttcggctgcggctccgcaatcgc 492 |||||||| ||||||||||| ||||| ||||| Sbjct: 381540 ttcaagacattcggctgcgggtccgccatcgc 381571
>gb|AC021059.25| Homo sapiens 3 BAC RP11-464E15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164076 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ccggggctggcggcggcggg 282 |||||||||||||||||||| Sbjct: 22983 ccggggctggcggcggcggg 22964
>emb|CR925752.5| Mouse DNA sequence from clone RP24-106O24 on chromosome 4, complete sequence Length = 103739 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 gctggcggcggcgggggcga 287 |||||||||||||||||||| Sbjct: 32086 gctggcggcggcgggggcga 32105
>gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete sequence Length = 130306 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 ggcggcggcgggggcgaggg 290 |||||||||||||||||||| Sbjct: 115716 ggcggcggcgggggcgaggg 115697
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 gccggggctggcggcggcgg 281 |||||||||||||||||||| Sbjct: 2442231 gccggggctggcggcggcgg 2442250
>gb|AF105219.1|AF105219 Thermomonospora curvata putative regulatory protein (aglR), alpha-1,4-glucosidase (aglA), and putative maltose binding protein (aglE) genes, complete cds; and transporter protein (aglF) gene, partial cds Length = 5521 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 ccgggaagatcgtcgacgcc 457 |||||||||||||||||||| Sbjct: 5060 ccgggaagatcgtcgacgcc 5079
>gb|AF403738.1|AF403738 Culex nigripalpus baculovirus, complete genome Length = 108252 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 cgtaccacgagcgggtggtg 310 |||||||||||||||||||| Sbjct: 49662 cgtaccacgagcgggtggtg 49643
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 caccggatcgccacctcttccgcg 53 |||||||||||||||||| ||||| Sbjct: 921010 caccggatcgccacctctgccgcg 920987
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 cgccggggctggcggcggcggggg 284 |||||||||||||||||| ||||| Sbjct: 131430 cgccggggctggcggcggtggggg 131453
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 ggggctggcggcggcggggg 284 |||||||||||||||||||| Sbjct: 4204996 ggggctggcggcggcggggg 4204977
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 ggcggcggcgggggcgaggg 290 |||||||||||||||||||| Sbjct: 14771338 ggcggcggcgggggcgaggg 14771319
>gb|AC092144.4| Homo sapiens chromosome 16 clone RP11-572L10, complete sequence Length = 186711 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 gggctggcggcggcgggggc 285 |||||||||||||||||||| Sbjct: 73677 gggctggcggcggcgggggc 73658
>gb|AF231056.1|AF231056 Homo sapiens BRG1-Associated Factor 250a (BAF250a) mRNA, complete cds Length = 7697 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 gctggcggcggcgggggcga 287 |||||||||||||||||||| Sbjct: 411 gctggcggcggcgggggcga 392
>emb|BX935251.1| Gallus gallus finished cDNA, clone ChEST959e14 Length = 1092 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 gccggggctggcggcggcgg 281 |||||||||||||||||||| Sbjct: 98 gccggggctggcggcggcgg 79
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 gggccgcgccggggctggcggcgg 278 ||||||||||||||| |||||||| Sbjct: 191733 gggccgcgccggggcgggcggcgg 191756
>ref|XM_213811.3| PREDICTED: Rattus norvegicus similar to nitrogen fixation cluster-like (predicted) (LOC288740), mRNA Length = 871 Score = 40.1 bits (20), Expect = 7.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 371 accgggctggtcggcgcgccggcctgcggcgacgtcatgaagctgcagatcc 422 ||||| ||||| || || ||||| || || ||||||||||| |||||||||| Sbjct: 182 accggactggtgggggctccggcatgtggtgacgtcatgaaactgcagatcc 233
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 gcgccggggctggcggcggcgggg 283 |||||||||||||||||| ||||| Sbjct: 538354 gcgccggggctggcggcgccgggg 538377
>ref|XM_216340.3| PREDICTED: Rattus norvegicus AT rich interactive domain 1A (Swi1 like) (predicted) (Arid1a_predicted), mRNA Length = 8527 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 gctggcggcggcgggggcga 287 |||||||||||||||||||| Sbjct: 402 gctggcggcggcgggggcga 383
>gb|AC018730.8| Homo sapiens BAC clone RP11-13J10 from 2, complete sequence Length = 154728 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 ggggctggcggcggcggggg 284 |||||||||||||||||||| Sbjct: 80749 ggggctggcggcggcggggg 80768
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 ggggctggcggcggcggggg 284 |||||||||||||||||||| Sbjct: 50217 ggggctggcggcggcggggg 50198
>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1276_B06 Length = 175174 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 ggcggcggcgggggcgagggcgta 294 ||||||| |||||||||||||||| Sbjct: 147902 ggcggcgtcgggggcgagggcgta 147925
>dbj|AK099806.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098F17, full insert sequence Length = 1900 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 ggcggcggcgggggcgaggg 290 |||||||||||||||||||| Sbjct: 165 ggcggcggcgggggcgaggg 146
>emb|AJ326698.1|HSA326698 Homo sapiens genomic sequence surrounding NotI site, clone NL4-BI17C Length = 578 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 ggggctggcggcggcggggg 284 |||||||||||||||||||| Sbjct: 151 ggggctggcggcggcggggg 170
>gb|AF065476.1|HSGN1E1 Homo sapiens glycogenin-1 (GYG) gene, promoter and exon 1 Length = 2269 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ccggggctggcggcggcggg 282 |||||||||||||||||||| Sbjct: 2203 ccggggctggcggcggcggg 2184
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 364 cgtcggcaccgggctggtcggcgcgccg 391 |||||||||||||||| |||||||||| Sbjct: 2682410 cgtcggcaccgggctgcccggcgcgccg 2682383
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 268 gctggcggcggcgggggcgagggc 291 ||||||||||||| |||||||||| Sbjct: 2619769 gctggcggcggcgcgggcgagggc 2619792
>dbj|AB001835.1| Homo sapiens DNA for Brain-1, complete cds Length = 1679 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 ggggctggcggcggcggggg 284 |||||||||||||||||||| Sbjct: 141 ggggctggcggcggcggggg 160 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,250,838 Number of Sequences: 3902068 Number of extensions: 3250838 Number of successful extensions: 86609 Number of sequences better than 10.0: 241 Number of HSP's better than 10.0 without gapping: 243 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80563 Number of HSP's gapped (non-prelim): 6039 length of query: 517 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 494 effective length of database: 17,143,297,704 effective search space: 8468789065776 effective search space used: 8468789065776 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)