ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart07f09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK059648.1| Oryza sativa (japonica cultivar-group) cDNA clon... 488 e-135
2dbj|AK121797.1| Oryza sativa (japonica cultivar-group) cDNA clon... 406 e-110
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
4dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
5dbj|AP006157.3| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
6gb|AY484589.1| Musa acuminata clone MuH9, genomic sequence 48 0.028
7ref|XM_568933.1| Cryptococcus neoformans var. neoformans JEC21 4... 46 0.11
8gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chr... 46 0.11
9gb|AC112791.3| Mus musculus BAC clone RP23-182O1 from 13, comple... 44 0.43
10emb|BX072539.13| Zebrafish DNA sequence from clone CH211-286O24 ... 44 0.43
11gb|AC113350.2| Homo sapiens chromosome 5 clone CTD-2548J21, comp... 44 0.43
12gb|AC079319.19| Homo sapiens 12q BAC RP11-118A3 (Roswell Park Ca... 44 0.43
13ref|XM_654201.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 1.7
14gb|AC082651.6| Homo sapiens BAC clone RP11-521D12 from 2, comple... 42 1.7
15gb|AC092835.4| Homo sapiens BAC clone RP11-11P22 from 2, complet... 42 1.7
16emb|AL929270.14| Mouse DNA sequence from clone RP23-100K15 on ch... 42 1.7
17emb|AL672287.12| Mouse DNA sequence from clone RP23-151I8 on chr... 42 1.7
18dbj|D86212.1|BMOTA Bombyx mori DNA for trehalase, complete cds 42 1.7
19ref|NM_123027.2| Arabidopsis thaliana catalytic/ hydrolase/ phos... 40 6.7
20ref|NM_123037.2| Arabidopsis thaliana catalytic/ hydrolase/ phos... 40 6.7
21ref|NM_196833.1| Oryza sativa (japonica cultivar-group) putative... 40 6.7
22ref|XM_470267.1| Oryza sativa (japonica cultivar-group), predic... 40 6.7
23ref|XM_478649.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.7
24ref|XM_514001.1| PREDICTED: Pan troglodytes similar to chromosom... 40 6.7
25gb|AE017308.1| Mycoplasma mobile 163K complete genome 40 6.7
26gb|AC150310.1| Latimeria menadoensis clone VMRC4-40C18, complete... 40 6.7
27gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.7
28gb|AF525078.1| Mus musculus RAP250 (Rap250) gene, exons 5 throug... 40 6.7
29emb|CT025841.2| Medicago truncatula chromosome 5 clone mth2-131j... 40 6.7
30gb|AC124497.3| Mus musculus BAC clone RP23-480E8 from chromosome... 40 6.7
31gb|AC125049.3| Mus musculus BAC clone RP23-367C15 from chromosom... 40 6.7
32emb|Z96050.1|HS105D12 Human DNA sequence from clone RP1-105D12 o... 40 6.7
33emb|AL445532.8| Human DNA sequence from clone RP11-263K15 on chr... 40 6.7
34gb|DQ131585.1| Opisthorchis viverrini cathepsin D-like aspartic ... 40 6.7
35gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.7
36emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.7
37emb|AL772279.7| Zebrafish DNA sequence from clone CH211-191N13 i... 40 6.7
38gb|AY122899.1| Arabidopsis thaliana AT5g36790/f5h8_20 mRNA, comp... 40 6.7
39gb|AC008500.7| Homo sapiens chromosome 5 clone CTC-439D5, comple... 40 6.7
40gb|AC141866.11| Medicago truncatula clone mth2-12p22, complete s... 40 6.7
41gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.7
42gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 gen... 40 6.7
43gb|AY094446.1| Arabidopsis thaliana AT5g36790/f5h8_20 mRNA, comp... 40 6.7
44gb|AC012310.5| Homo sapiens chromosome 19 clone CTC-518O7, compl... 40 6.7
45gb|AC093805.3| Homo sapiens BAC clone RP11-326O9 from 4, complet... 40 6.7
46gb|AF420068.1|AF420068 Clonorchis sinensis aspartic protease mRN... 40 6.7
47dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
48dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
49gb|AC093756.3| Homo sapiens BAC clone RP11-56A1 from 2, complete... 40 6.7
50dbj|AK108557.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
51dbj|AK101616.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
52dbj|AK068079.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
53gb|AC007435.12|AC007435 Homo sapiens, clone 6_C_10, complete seq... 40 6.7
54gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.7
55emb|AL845325.10| Mouse DNA sequence from clone RP23-32O9 on chro... 40 6.7 
>dbj|AK059648.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-C04, full
           insert sequence
          Length = 1305

 Score =  488 bits (246), Expect = e-135
 Identities = 390/438 (89%)
 Strand = Plus / Plus

                                                                       
Query: 60  ctcctcaccgccgacgccgcccgatccctcgttggctctgtcgacgccttcctcttcgat 119
           |||||||||||||||||||||||||||||||| | ||| ||||||||||| |||||||| 
Sbjct: 92  ctcctcaccgccgacgccgcccgatccctcgtcgactccgtcgacgcctttctcttcgac 151

                                                                       
Query: 120 tgcgatggggtgatttggaaaggggacgagctcatccaaggggtccccgagacgctggag 179
           ||||| |||||||||||||| |||||  |||| ||| |||||||||| |||||  |||| 
Sbjct: 152 tgcgacggggtgatttggaagggggatcagctaatcgaaggggtccctgagactttggac 211

                                                                       
Query: 180 ttgctgcgaaaattgggcaagaaattagtttttgtaacaaacaattctaggaagtcgaga 239
            | ||||| ||| ||||||||||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 212 ctcctgcggaaaatgggcaagaaattagtttttgtaacgaacaactctagaaagtcgaga 271

                                                                       
Query: 240 cggcagtattcaaagaaattcaaaacacttggccttgaagttactgaggaagagatcttc 299
            | |||||| | ||||| |||| | ||||||| ||||||||||| |||||||||||||| 
Sbjct: 272 agacagtatgcgaagaagttcagagcacttggacttgaagttacagaggaagagatcttt 331

                                                                       
Query: 300 acatcatcatttgcagcagccatgttcttgaagttaaataaattttctccagaaaagaag 359
           ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 332 acatcatcatttgcagcagccatgttcttgaagttaaataatttctctccagaaaagaag 391

                                                                       
Query: 360 gtttatgttgttggtgaggatggcattttggacgagctcaagttagctggctttgaatgt 419
           ||||||||||| ||||||||||| |||||||| |||||||  ||||| || |||||||||
Sbjct: 392 gtttatgttgtcggtgaggatggtattttggaagagctcagattagccggttttgaatgt 451

                                                                       
Query: 420 tttggtggtccggaggatggcaagaaaaacataatgttggaggcgaacttctactttgat 479
           || ||||| |||||||||||||||||||||||| || ||||||| |||||||||||||| 
Sbjct: 452 ttaggtggcccggaggatggcaagaaaaacatattgctggaggcaaacttctactttgaa 511

                             
Query: 480 cacgacaaaagtgttgga 497
           || |||||||||||||||
Sbjct: 512 catgacaaaagtgttgga 529
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>dbj|AK121797.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095P18, full
           insert sequence
          Length = 4262

 Score =  406 bits (205), Expect = e-110
 Identities = 331/373 (88%)
 Strand = Plus / Plus

                                                                       
Query: 60  ctcctcaccgccgacgccgcccgatccctcgttggctctgtcgacgccttcctcttcgat 119
           |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||| 
Sbjct: 93  ctcctcaccgccgacgccgcccgatccctcgtcgactccgtcgacgccttcctcttcgac 152

                                                                       
Query: 120 tgcgatggggtgatttggaaaggggacgagctcatccaaggggtccccgagacgctggag 179
           ||||| |||||||||||||| |||||  |||| ||| |||||||||| |||||  |||| 
Sbjct: 153 tgcgacggggtgatttggaagggggatcagctaatcgaaggggtccctgagactttggac 212

                                                                       
Query: 180 ttgctgcgaaaattgggcaagaaattagtttttgtaacaaacaattctaggaagtcgaga 239
            | ||||| ||| ||||||||||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 213 ctcctgcggaaaatgggcaagaaattagtttttgtaacgaacaactctagaaagtcgaga 272

                                                                       
Query: 240 cggcagtattcaaagaaattcaaaacacttggccttgaagttactgaggaagagatcttc 299
            | |||||| | ||||| |||| | ||||||| ||||||||||| |||||||||||||| 
Sbjct: 273 agacagtatgcgaagaagttcagagcacttggacttgaagttacagaggaagagatcttt 332

                                                                       
Query: 300 acatcatcatttgcagcagccatgttcttgaagttaaataaattttctccagaaaagaag 359
           ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 333 acatcatcatttgcagcagccatgttcttgaagttaaataatttctctccagaaaagaag 392

                                                                       
Query: 360 gtttatgttgttggtgaggatggcattttggacgagctcaagttagctggctttgaatgt 419
           ||||||||||| ||||||||||| |||||||| |||||||  ||||| || |||||||||
Sbjct: 393 gtttatgttgtcggtgaggatggtattttggaagagctcagattagccggttttgaatgt 452

                        
Query: 420 tttggtggtccgg 432
           || ||||| ||||
Sbjct: 453 ttaggtggcccgg 465



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 62/67 (92%)
 Strand = Plus / Plus

                                                                        
Query: 431  ggaggatggcaagaaaaacataatgttggaggcgaacttctactttgatcacgacaaaag 490
            |||||||||||||||||||||| || ||||||| |||||||||||||| || ||||||||
Sbjct: 1099 ggaggatggcaagaaaaacatattgctggaggcaaacttctactttgaacatgacaaaag 1158

                   
Query: 491  tgttgga 497
            |||||||
Sbjct: 1159 tgttgga 1165
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  127 bits (64), Expect = 4e-26
 Identities = 73/76 (96%)
 Strand = Plus / Minus

                                                                           
Query: 286     aggaagagatcttcacatcatcatttgcagcagccatgttcttgaagttaaataaatttt 345
               ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 4487803 aggaagagatctttacatcatcatttgcagcagccatgttcttgaagttaaataatttct 4487744

                               
Query: 346     ctccagaaaagaaggt 361
               ||||||||||||||||
Sbjct: 4487743 ctccagaaaagaaggt 4487728



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 61/65 (93%)
 Strand = Plus / Minus

                                                                           
Query: 60      ctcctcaccgccgacgccgcccgatccctcgttggctctgtcgacgccttcctcttcgat 119
               |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||| 
Sbjct: 4489334 ctcctcaccgccgacgccgcccgatccctcgtcgactccgtcgacgccttcctcttcgac 4489275

                    
Query: 120     tgcga 124
               |||||
Sbjct: 4489274 tgcga 4489270



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 83/95 (87%)
 Strand = Plus / Minus

                                                                           
Query: 194     gggcaagaaattagtttttgtaacaaacaattctaggaagtcgagacggcagtattcaaa 253
               |||||||||||||||||||||||| ||||| ||||| ||||||||| | |||||| | ||
Sbjct: 4487988 gggcaagaaattagtttttgtaacgaacaactctagaaagtcgagaagacagtatgcgaa 4487929

                                                  
Query: 254     gaaattcaaaacacttggccttgaagttactgagg 288
               ||| |||| | ||||||| ||||||||||| ||||
Sbjct: 4487928 gaagttcagagcacttggacttgaagttacagagg 4487894



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                           
Query: 431     ggaggatggcaagaaaaacataatgttggaggcgaacttctactttgatcacgacaaaag 490
               |||||||||||||||||||||| || ||||||| |||||||||||||| || ||||||||
Sbjct: 4485943 ggaggatggcaagaaaaacatattgctggaggcaaacttctactttgaacatgacaaaag 4485884

                  
Query: 491     tgt 493
               |||
Sbjct: 4485883 tgt 4485881



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                           
Query: 357     aaggtttatgttgttggtgaggatggcattttggacgagctcaagttagctggctttgaa 416
               |||||||||||||| ||||||||||| |||||||| |||||||  ||||| || ||||||
Sbjct: 4486652 aaggtttatgttgtcggtgaggatggtattttggaagagctcagattagccggttttgaa 4486593

                               
Query: 417     tgttttggtggtccgg 432
               ||||| ||||| ||||
Sbjct: 4486592 tgtttaggtggcccgg 4486577



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                              
Query: 126     ggggtgatttggaaaggggacgagctcatccaaggggtccccgagac 172
               |||||||||||||| |||||  |||| ||| |||||||||| |||||
Sbjct: 4489108 ggggtgatttggaagggggatcagctaatcgaaggggtccctgagac 4489062
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>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0638A12
          Length = 140731

 Score =  127 bits (64), Expect = 4e-26
 Identities = 73/76 (96%)
 Strand = Plus / Minus

                                                                         
Query: 286   aggaagagatcttcacatcatcatttgcagcagccatgttcttgaagttaaataaatttt 345
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 31177 aggaagagatctttacatcatcatttgcagcagccatgttcttgaagttaaataatttct 31118

                             
Query: 346   ctccagaaaagaaggt 361
             ||||||||||||||||
Sbjct: 31117 ctccagaaaagaaggt 31102



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 61/65 (93%)
 Strand = Plus / Minus

                                                                         
Query: 60    ctcctcaccgccgacgccgcccgatccctcgttggctctgtcgacgccttcctcttcgat 119
             |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||| 
Sbjct: 32708 ctcctcaccgccgacgccgcccgatccctcgtcgactccgtcgacgccttcctcttcgac 32649

                  
Query: 120   tgcga 124
             |||||
Sbjct: 32648 tgcga 32644



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 83/95 (87%)
 Strand = Plus / Minus

                                                                         
Query: 194   gggcaagaaattagtttttgtaacaaacaattctaggaagtcgagacggcagtattcaaa 253
             |||||||||||||||||||||||| ||||| ||||| ||||||||| | |||||| | ||
Sbjct: 31362 gggcaagaaattagtttttgtaacgaacaactctagaaagtcgagaagacagtatgcgaa 31303

                                                
Query: 254   gaaattcaaaacacttggccttgaagttactgagg 288
             ||| |||| | ||||||| ||||||||||| ||||
Sbjct: 31302 gaagttcagagcacttggacttgaagttacagagg 31268



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                         
Query: 431   ggaggatggcaagaaaaacataatgttggaggcgaacttctactttgatcacgacaaaag 490
             |||||||||||||||||||||| || ||||||| |||||||||||||| || ||||||||
Sbjct: 29317 ggaggatggcaagaaaaacatattgctggaggcaaacttctactttgaacatgacaaaag 29258

                
Query: 491   tgt 493
             |||
Sbjct: 29257 tgt 29255



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                         
Query: 357   aaggtttatgttgttggtgaggatggcattttggacgagctcaagttagctggctttgaa 416
             |||||||||||||| ||||||||||| |||||||| |||||||  ||||| || ||||||
Sbjct: 30026 aaggtttatgttgtcggtgaggatggtattttggaagagctcagattagccggttttgaa 29967

                             
Query: 417   tgttttggtggtccgg 432
             ||||| ||||| ||||
Sbjct: 29966 tgtttaggtggcccgg 29951



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 126   ggggtgatttggaaaggggacgagctcatccaaggggtccccgagac 172
             |||||||||||||| |||||  |||| ||| |||||||||| |||||
Sbjct: 32482 ggggtgatttggaagggggatcagctaatcgaaggggtccctgagac 32436
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>dbj|AP006157.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1077E10
          Length = 100821

 Score =  127 bits (64), Expect = 4e-26
 Identities = 73/76 (96%)
 Strand = Plus / Minus

                                                                         
Query: 286   aggaagagatcttcacatcatcatttgcagcagccatgttcttgaagttaaataaatttt 345
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 60291 aggaagagatctttacatcatcatttgcagcagccatgttcttgaagttaaataatttct 60232

                             
Query: 346   ctccagaaaagaaggt 361
             ||||||||||||||||
Sbjct: 60231 ctccagaaaagaaggt 60216



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 61/65 (93%)
 Strand = Plus / Minus

                                                                         
Query: 60    ctcctcaccgccgacgccgcccgatccctcgttggctctgtcgacgccttcctcttcgat 119
             |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||| 
Sbjct: 61822 ctcctcaccgccgacgccgcccgatccctcgtcgactccgtcgacgccttcctcttcgac 61763

                  
Query: 120   tgcga 124
             |||||
Sbjct: 61762 tgcga 61758



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 83/95 (87%)
 Strand = Plus / Minus

                                                                         
Query: 194   gggcaagaaattagtttttgtaacaaacaattctaggaagtcgagacggcagtattcaaa 253
             |||||||||||||||||||||||| ||||| ||||| ||||||||| | |||||| | ||
Sbjct: 60476 gggcaagaaattagtttttgtaacgaacaactctagaaagtcgagaagacagtatgcgaa 60417

                                                
Query: 254   gaaattcaaaacacttggccttgaagttactgagg 288
             ||| |||| | ||||||| ||||||||||| ||||
Sbjct: 60416 gaagttcagagcacttggacttgaagttacagagg 60382



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                         
Query: 431   ggaggatggcaagaaaaacataatgttggaggcgaacttctactttgatcacgacaaaag 490
             |||||||||||||||||||||| || ||||||| |||||||||||||| || ||||||||
Sbjct: 58431 ggaggatggcaagaaaaacatattgctggaggcaaacttctactttgaacatgacaaaag 58372

                
Query: 491   tgt 493
             |||
Sbjct: 58371 tgt 58369



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                         
Query: 357   aaggtttatgttgttggtgaggatggcattttggacgagctcaagttagctggctttgaa 416
             |||||||||||||| ||||||||||| |||||||| |||||||  ||||| || ||||||
Sbjct: 59140 aaggtttatgttgtcggtgaggatggtattttggaagagctcagattagccggttttgaa 59081

                             
Query: 417   tgttttggtggtccgg 432
             ||||| ||||| ||||
Sbjct: 59080 tgtttaggtggcccgg 59065



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 126   ggggtgatttggaaaggggacgagctcatccaaggggtccccgagac 172
             |||||||||||||| |||||  |||| ||| |||||||||| |||||
Sbjct: 61596 ggggtgatttggaagggggatcagctaatcgaaggggtccctgagac 61550
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>gb|AY484589.1| Musa acuminata clone MuH9, genomic sequence
          Length = 82723

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 96    tctgtcgacgccttcctcttcgattgcgatgg 127
             ||||||||  ||||||||||||||||||||||
Sbjct: 14614 tctgtcgagaccttcctcttcgattgcgatgg 14583
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>ref|XM_568933.1| Cryptococcus neoformans var. neoformans JEC21
           4-nitrophenylphosphatase (CNB04360) partial mRNA
          Length = 927

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 108 ttcctcttcgattgcgatggggt 130
           |||||||||||||||||||||||
Sbjct: 85  ttcctcttcgattgcgatggggt 107
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>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete
               sequence
          Length = 1632307

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 108     ttcctcttcgattgcgatggggt 130
               |||||||||||||||||||||||
Sbjct: 1271129 ttcctcttcgattgcgatggggt 1271107
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>gb|AC112791.3| Mus musculus BAC clone RP23-182O1 from 13, complete sequence
          Length = 208443

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 367   ttgttggtgaggatggcatttt 388
             ||||||||||||||||||||||
Sbjct: 76651 ttgttggtgaggatggcatttt 76672
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>emb|BX072539.13| Zebrafish DNA sequence from clone CH211-286O24 in linkage group 6,
             complete sequence
          Length = 78217

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 197   caagaaattagtttttgtaaca 218
             ||||||||||||||||||||||
Sbjct: 14709 caagaaattagtttttgtaaca 14688
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>gb|AC113350.2| Homo sapiens chromosome 5 clone CTD-2548J21, complete sequence
          Length = 80117

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 211  ttgtaacaaacaattctaggaa 232
            ||||||||||||||||||||||
Sbjct: 9654 ttgtaacaaacaattctaggaa 9633
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>gb|AC079319.19| Homo sapiens 12q BAC RP11-118A3 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 152449

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 271   gccttgaagttactgaggaaga 292
             ||||||||||||||||||||||
Sbjct: 60867 gccttgaagttactgaggaaga 60888
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>ref|XM_654201.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1689.2), mRNA
          Length = 1506

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 88   tcgttggctctgtcgacgccttcctcttc 116
            |||||||||||||||| | ||||||||||
Sbjct: 1271 tcgttggctctgtcgatggcttcctcttc 1243
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>gb|AC082651.6| Homo sapiens BAC clone RP11-521D12 from 2, complete sequence
          Length = 203770

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 329    gaagttaaataaattttctccagaaaaga 357
              ||||||||| ||| |||||||||||||||
Sbjct: 108461 gaagttaaagaaagtttctccagaaaaga 108433
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>gb|AC092835.4| Homo sapiens BAC clone RP11-11P22 from 2, complete sequence
          Length = 158404

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 250   caaagaaattcaaaacacttg 270
             |||||||||||||||||||||
Sbjct: 91140 caaagaaattcaaaacacttg 91120
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>emb|AL929270.14| Mouse DNA sequence from clone RP23-100K15 on chromosome X, complete
             sequence
          Length = 115038

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 197   caagaaattagtttttgtaac 217
             |||||||||||||||||||||
Sbjct: 47802 caagaaattagtttttgtaac 47782
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>emb|AL672287.12| Mouse DNA sequence from clone RP23-151I8 on chromosome X, complete
             sequence
          Length = 81776

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 197   caagaaattagtttttgtaac 217
             |||||||||||||||||||||
Sbjct: 14540 caagaaattagtttttgtaac 14520
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>dbj|D86212.1|BMOTA Bombyx mori DNA for trehalase, complete cds
          Length = 18972

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 246  tattcaaagaaattcaaaaca 266
            |||||||||||||||||||||
Sbjct: 2016 tattcaaagaaattcaaaaca 1996
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>ref|NM_123027.2| Arabidopsis thaliana catalytic/ hydrolase/ phosphoglycolate
           phosphatase/ phosphoric monoester hydrolase AT5G36700
           mRNA, complete cds
          Length = 1413

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 112 tcttcgattgcgatggggtgatttggaa 139
           |||||||||| ||||| |||||||||||
Sbjct: 281 tcttcgattgtgatggtgtgatttggaa 308
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>ref|NM_123037.2| Arabidopsis thaliana catalytic/ hydrolase/ phosphoglycolate
           phosphatase/ phosphoric monoester hydrolase AT5G36790
           mRNA, complete cds
          Length = 1371

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 112 tcttcgattgcgatggggtgatttggaa 139
           |||||||||| ||||| |||||||||||
Sbjct: 281 tcttcgattgtgatggtgtgatttggaa 308
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>ref|NM_196833.1| Oryza sativa (japonica cultivar-group) putative zinc finger helicase
            (OSJNBa0018F16.23), mRNA
          Length = 4341

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 348  ccagaaaagaaggtttatgttgtt 371
            |||||||||||||||| |||||||
Sbjct: 3004 ccagaaaagaaggtttttgttgtt 3027
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>ref|XM_470267.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 837

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 64  tcaccgccgacgccgcccga 83
           ||||||||||||||||||||
Sbjct: 128 tcaccgccgacgccgcccga 109
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>ref|XM_478649.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3237

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 100  tcgacgccttcctcttcgat 119
            ||||||||||||||||||||
Sbjct: 2041 tcgacgccttcctcttcgat 2060
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>ref|XM_514001.1| PREDICTED: Pan troglodytes similar to chromosome 1 open reading
           frame 9; membrane protein CH1 (LOC457517), mRNA
          Length = 440

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 342 ttttctccagaaaagaaggt 361
           ||||||||||||||||||||
Sbjct: 393 ttttctccagaaaagaaggt 412
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>gb|AE017308.1| Mycoplasma mobile 163K complete genome
          Length = 777079

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 247    attcaaagaaattcaaaaca 266
              ||||||||||||||||||||
Sbjct: 111189 attcaaagaaattcaaaaca 111208
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>gb|AC150310.1| Latimeria menadoensis clone VMRC4-40C18, complete sequence
          Length = 170774

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 301    catcatcatttgcagcagccatgt 324
              ||||||| ||||||||||||||||
Sbjct: 110304 catcatcctttgcagcagccatgt 110281
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 64      tcaccgccgacgccgcccga 83
               ||||||||||||||||||||
Sbjct: 3160968 tcaccgccgacgccgcccga 3160987
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>gb|AF525078.1| Mus musculus RAP250 (Rap250) gene, exons 5 through 9 and partial cds
          Length = 18108

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  tttgcagcagccatgttctt 328
            ||||||||||||||||||||
Sbjct: 2479 tttgcagcagccatgttctt 2460
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>emb|CT025841.2| Medicago truncatula chromosome 5 clone mth2-131j21, COMPLETE SEQUENCE
          Length = 122251

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   ttagtttttgtaacaaacaa 223
             ||||||||||||||||||||
Sbjct: 95456 ttagtttttgtaacaaacaa 95437
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>gb|AC124497.3| Mus musculus BAC clone RP23-480E8 from chromosome 5, complete sequence
          Length = 206926

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 438    ggcaagaaaaacataatgtt 457
              ||||||||||||||||||||
Sbjct: 134362 ggcaagaaaaacataatgtt 134343
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>gb|AC125049.3| Mus musculus BAC clone RP23-367C15 from chromosome 9, complete sequence
          Length = 211511

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    ggggtgatttggaaagggga 145
              ||||||||||||||||||||
Sbjct: 112200 ggggtgatttggaaagggga 112219
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>emb|Z96050.1|HS105D12 Human DNA sequence from clone RP1-105D12 on chromosome 1q24-25 Contains
             the 3' end of the C1orf9 gene for chromosome 1 open
             reading frame 9 and the TNFSF6 gene for tumor necrosis
             factor (ligand) superfamily member 6, complete sequence
          Length = 85811

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   ttttctccagaaaagaaggt 361
             ||||||||||||||||||||
Sbjct: 26535 ttttctccagaaaagaaggt 26554
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>emb|AL445532.8| Human DNA sequence from clone RP11-263K15 on chromosome 9 Contains the
             3' end of the NTRK2 gene for Neurotrophic tyrosine kinase,
             receptor, type 2 (TRKB), complete sequence
          Length = 171629

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 261   aaaacacttggccttgaagttact 284
             |||| |||||||||||||||||||
Sbjct: 70682 aaaatacttggccttgaagttact 70705
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>gb|DQ131585.1| Opisthorchis viverrini cathepsin D-like aspartic protease mRNA,
           complete cds
          Length = 1562

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 455 gttggaggcgaacttctact 474
           ||||||||||||||||||||
Sbjct: 786 gttggaggcgaacttctact 805
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>gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1134F05,
             complete sequence
          Length = 101799

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    tcaccgccgacgccgcccga 83
             ||||||||||||||||||||
Sbjct: 83981 tcaccgccgacgccgcccga 84000
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>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16
          Length = 349841

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 381    ggcattttggacgagctcaa 400
              ||||||||||||||||||||
Sbjct: 128379 ggcattttggacgagctcaa 128360
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>emb|AL772279.7| Zebrafish DNA sequence from clone CH211-191N13 in linkage group 7
            Contains a putative novel gene, a novel retrotransposon
            and eight CpG islands, complete sequence
          Length = 146786

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 438  ggcaagaaaaacataatgtt 457
            ||||||||||||||||||||
Sbjct: 4639 ggcaagaaaaacataatgtt 4620
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>gb|AY122899.1| Arabidopsis thaliana AT5g36790/f5h8_20 mRNA, complete cds
          Length = 1089

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 112 tcttcgattgcgatggggtgatttggaa 139
           |||||||||| ||||| |||||||||||
Sbjct: 248 tcttcgattgtgatggtgtgatttggaa 275
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>gb|AC008500.7| Homo sapiens chromosome 5 clone CTC-439D5, complete sequence
          Length = 264095

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 341   attttctccagaaaagaagg 360
             ||||||||||||||||||||
Sbjct: 74874 attttctccagaaaagaagg 74855
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>gb|AC141866.11| Medicago truncatula clone mth2-12p22, complete sequence
          Length = 126907

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 96    tctgtcgacgccttcctcttcgattgcgatgg 127
             |||||||| || || |||||||||||||||||
Sbjct: 52360 tctgtcgaagcttttctcttcgattgcgatgg 52329
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>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16,
              complete sequence
          Length = 179157

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 348    ccagaaaagaaggtttatgttgtt 371
              |||||||||||||||| |||||||
Sbjct: 161769 ccagaaaagaaggtttttgttgtt 161792
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>gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 genomic sequence, complete
             sequence
          Length = 117157

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 348   ccagaaaagaaggtttatgttgtt 371
             |||||||||||||||| |||||||
Sbjct: 75202 ccagaaaagaaggtttttgttgtt 75179
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>gb|AY094446.1| Arabidopsis thaliana AT5g36790/f5h8_20 mRNA, complete cds
          Length = 1372

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 112 tcttcgattgcgatggggtgatttggaa 139
           |||||||||| ||||| |||||||||||
Sbjct: 282 tcttcgattgtgatggtgtgatttggaa 309
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>gb|AC012310.5| Homo sapiens chromosome 19 clone CTC-518O7, complete sequence
          Length = 115767

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   aaataaattttctccagaaa 354
             ||||||||||||||||||||
Sbjct: 81189 aaataaattttctccagaaa 81170
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>gb|AC093805.3| Homo sapiens BAC clone RP11-326O9 from 4, complete sequence
          Length = 165538

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 339    aaattttctccagaaaagaa 358
              ||||||||||||||||||||
Sbjct: 111507 aaattttctccagaaaagaa 111526
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>gb|AF420068.1|AF420068 Clonorchis sinensis aspartic protease mRNA, complete cds
          Length = 1598

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 455 gttggaggcgaacttctact 474
           ||||||||||||||||||||
Sbjct: 653 gttggaggcgaacttctact 672
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 348      ccagaaaagaaggtttatgttgtt 371
                |||||||||||||||| |||||||
Sbjct: 16282880 ccagaaaagaaggtttttgttgtt 16282903
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 64      tcaccgccgacgccgcccga 83
               ||||||||||||||||||||
Sbjct: 3161079 tcaccgccgacgccgcccga 3161098
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>gb|AC093756.3| Homo sapiens BAC clone RP11-56A1 from 2, complete sequence
          Length = 158073

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 299    cacatcatcatttgcagcag 318
              ||||||||||||||||||||
Sbjct: 147672 cacatcatcatttgcagcag 147691
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>dbj|AK108557.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-E12, full
           insert sequence
          Length = 1019

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 64  tcaccgccgacgccgcccga 83
           ||||||||||||||||||||
Sbjct: 299 tcaccgccgacgccgcccga 280
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>dbj|AK101616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052G09, full
            insert sequence
          Length = 3238

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 100  tcgacgccttcctcttcgat 119
            ||||||||||||||||||||
Sbjct: 2042 tcgacgccttcctcttcgat 2061
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>dbj|AK068079.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130J22, full
            insert sequence
          Length = 4216

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 348  ccagaaaagaaggtttatgttgtt 371
            |||||||||||||||| |||||||
Sbjct: 3196 ccagaaaagaaggtttttgttgtt 3219
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>gb|AC007435.12|AC007435 Homo sapiens, clone 6_C_10, complete sequence
          Length = 178342

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   aaagaaattcaaaacacttg 270
             ||||||||||||||||||||
Sbjct: 64286 aaagaaattcaaaacacttg 64267
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 348      ccagaaaagaaggtttatgttgtt 371
                |||||||||||||||| |||||||
Sbjct: 16291122 ccagaaaagaaggtttttgttgtt 16291145
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>emb|AL845325.10| Mouse DNA sequence from clone RP23-32O9 on chromosome 2, complete
              sequence
          Length = 129024

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 309    tttgcagcagccatgttctt 328
              ||||||||||||||||||||
Sbjct: 111547 tttgcagcagccatgttctt 111566


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,928,575
Number of Sequences: 3902068
Number of extensions: 5928575
Number of successful extensions: 124511
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124126
Number of HSP's gapped (non-prelim): 385
length of query: 497
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 475
effective length of database: 17,147,199,772
effective search space: 8144919891700
effective search space used: 8144919891700
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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