Clone Information

BLAST Search Result

Clone Name	bart07f08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ING4_CHICK (Q5ZKY4) Inhibitor of growth protein 4 (p29ING4)	61	1e-09
2	ING4_HUMAN (Q9UNL4) Inhibitor of growth protein 4 (p29ING4)	60	2e-09
3	ING5_MOUSE (Q9D8Y8) Inhibitor of growth protein 5	60	3e-09
4	ING4_MOUSE (Q8C0D7) Inhibitor of growth protein 4 (p29ING4)	60	3e-09
5	ING4_BOVIN (Q3T095) Inhibitor of growth protein 4 (p29ING4)	60	4e-09
6	ING5_HUMAN (Q8WYH8) Inhibitor of growth protein 5 (p28ING5)	59	6e-09
7	ING3_HUMAN (Q9NXR8) Inhibitor of growth protein 3 (p47ING3 protein)	57	3e-08
8	ING3_MOUSE (Q8VEK6) Inhibitor of growth protein 3 (p47ING3 protein)	57	3e-08
9	ING1_MOUSE (Q9QXV3) Inhibitor of growth protein 1	44	2e-04
10	ING2_MOUSE (Q9ESK4) Inhibitor of growth protein 2 (p33ING2) (Inh...	39	0.007
11	ING2_HUMAN (Q9H160) Inhibitor of growth protein 2 (p33ING2) (Inh...	38	0.015
12	MYO10_HUMAN (Q9HD67) Myosin-10 (Myosin X)	38	0.015
13	MYO10_BOVIN (P79114) Myosin-10 (Myosin X)	37	0.033
14	YNG2_KLULA (Q6CXN0) Chromatin modification-related protein YNG2 ...	34	0.21
15	UBP5_ARATH (O22207) Ubiquitin carboxyl-terminal hydrolase 5 (EC ...	34	0.21
16	STX_APLCA (Q16932) Syntaxin	34	0.21
17	KIFC2_MOUSE (O08672) Kinesin-like protein KIFC2	32	0.81
18	MYSP_BOOMI (Q86RN8) Paramyosin	32	0.81
19	UACA_MOUSE (Q8CGB3) Uveal autoantigen with coiled-coil domains a...	32	1.1
20	YNG2_DEBHA (Q6BNL6) Chromatin modification-related protein YNG2 ...	32	1.1
21	TGA1A_TOBAC (P14232) TGACG-sequence-specific DNA-binding protein...	31	1.8
22	SYP51_ARATH (Q9SA23) Syntaxin-51 (AtSYP51)	31	1.8
23	TRI29_MOUSE (Q8R2Q0) Tripartite motif protein 29	31	1.8
24	PLEC1_HUMAN (Q15149) Plectin-1 (PLTN) (PCN) (Hemidesmosomal prot...	30	3.1
25	CL190_DROME (Q9VJE5) Restin homolog (Cytoplasmic linker protein ...	30	3.1
26	MFP1_LYCES (P93203) MAR binding filament-like protein 1	30	4.0
27	SAS6_HUMAN (Q6UVJ0) Spindle assembly abnormal protein 6 homolog ...	29	5.2
28	SRP68_MOUSE (Q8BMA6) Signal recognition particle 68 kDa protein ...	29	6.8
29	TPS1_EMENI (O59921) Alpha,alpha-trehalose-phosphate synthase [UD...	29	6.8
30	SRP68_HUMAN (Q9UHB9) Signal recognition particle 68 kDa protein ...	29	6.8
31	YNG2_CANAL (Q5AHB8) Chromatin modification-related protein YNG2 ...	29	6.8
32	TRUB_VIBVY (Q7MI11) tRNA pseudouridine synthase B (EC 5.4.99.-) ...	29	6.8
33	TRUB_VIBVU (Q8DBV8) tRNA pseudouridine synthase B (EC 5.4.99.-) ...	29	6.8
34	TRUB_YERPS (Q66F58) tRNA pseudouridine synthase B (EC 5.4.99.-) ...	29	6.8
35	TRUB_YERPE (Q8ZBC4) tRNA pseudouridine synthase B (EC 5.4.99.-) ...	29	6.8
36	SRP68_CANFA (Q00004) Signal recognition particle 68 kDa protein ...	29	6.8
37	CD2L7_HUMAN (Q9NYV4) Cell division cycle 2-related protein kinas...	28	8.9
38	TPSA_ASPNG (Q00075) Alpha,alpha-trehalose-phosphate synthase [UD...	28	8.9
39	SAS6_MOUSE (Q80UK7) Spindle assembly abnormal protein 6 homolog	28	8.9
40	PSBA_MESVI (Q9MUW0) Photosystem Q(B) protein (32 kDa thylakoid m...	28	8.9
41	AKAP9_HUMAN (Q99996) A-kinase anchor protein 9 (Protein kinase A...	28	8.9
42	PLEC1_CRIGR (Q9JI55) Plectin-1 (PLTN) (PCN) (300-kDa intermediat...	28	8.9

>ING4_CHICK (Q5ZKY4) Inhibitor of growth protein 4 (p29ING4)|
          Length = 249

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 35/111 (31%), Positives = 57/111 (51%)
 Frame = +3

Query: 129 FLEDFQASVETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSITTY 308
           +LE +  S+E LP  L +N+ LMR+LD+  + ++ E ++   + I + +        T  
Sbjct: 6   YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKSEIDKLATEYISNAR--------TLS 57

Query: 309 EPAKLKFSDEAIEEQKHCVRIADEKVALATQTYDLVDAHIXQLDQFMRKLE 461
              KL    +  E    C    D+KV LA QTY++VD HI +LD  + + E
Sbjct: 58  SEEKLGLLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFE 108

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>ING4_HUMAN (Q9UNL4) Inhibitor of growth protein 4 (p29ING4)|
          Length = 249

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 35/111 (31%), Positives = 60/111 (54%)
 Frame = +3

Query: 129 FLEDFQASVETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSITTY 308
           +LE +  S+E LP  L +N+ LMR+LD+  + ++ E ++   + +   +      S+++ 
Sbjct: 6   YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSAR------SLSSE 59

Query: 309 EPAKLKFSDEAIEEQKHCVRIADEKVALATQTYDLVDAHIXQLDQFMRKLE 461
           E  KL    +  E    C    D+KV LA QTY++VD HI +LD  + + E
Sbjct: 60  E--KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFE 108

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>ING5_MOUSE (Q9D8Y8) Inhibitor of growth protein 5|
          Length = 240

 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 34/111 (30%), Positives = 56/111 (50%)
 Frame = +3

Query: 129 FLEDFQASVETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSITTY 308
           +LE +  S+E LP  L +N+ LMRELD+  +  + E +    + I  +K        T  
Sbjct: 6   YLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVK--------TLS 57

Query: 309 EPAKLKFSDEAIEEQKHCVRIADEKVALATQTYDLVDAHIXQLDQFMRKLE 461
              +++   +       C   +D+KV LA QTY++VD HI +LD  + + E
Sbjct: 58  SAQRVEHLQKIQSAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFE 108

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>ING4_MOUSE (Q8C0D7) Inhibitor of growth protein 4 (p29ING4)|
          Length = 249

 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 35/111 (31%), Positives = 60/111 (54%)
 Frame = +3

Query: 129 FLEDFQASVETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSITTY 308
           +LE +  S+E LP  L +N+ LMR+LD+  + ++ E ++   + +   +      S+++ 
Sbjct: 6   YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSAR------SLSSE 59

Query: 309 EPAKLKFSDEAIEEQKHCVRIADEKVALATQTYDLVDAHIXQLDQFMRKLE 461
           E  KL    +  E    C    D+KV LA QTY++VD HI +LD  + + E
Sbjct: 60  E--KLALLRQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFE 108

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>ING4_BOVIN (Q3T095) Inhibitor of growth protein 4 (p29ING4)|
          Length = 248

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 35/111 (31%), Positives = 56/111 (50%)
 Frame = +3

Query: 129 FLEDFQASVETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSITTY 308
           +LE +  S+E LP  L +N+ LMR+LD+  + ++ E        I+ +     S + +  
Sbjct: 6   YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAE--------IDKLASEYMSSARSRS 57

Query: 309 EPAKLKFSDEAIEEQKHCVRIADEKVALATQTYDLVDAHIXQLDQFMRKLE 461
              KL    +  E    C    D+KV LA QTY++VD HI +LD  + + E
Sbjct: 58  SEEKLALLRQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFE 108

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>ING5_HUMAN (Q8WYH8) Inhibitor of growth protein 5 (p28ING5)|
          Length = 240

 Score = 58.9 bits (141), Expect = 6e-09
 Identities = 34/111 (30%), Positives = 56/111 (50%)
 Frame = +3

Query: 129 FLEDFQASVETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSITTY 308
           +LE +  S+E LP  L +N+ LMRELD+  +  + E +    + I  +K        T  
Sbjct: 6   YLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVK--------TLS 57

Query: 309 EPAKLKFSDEAIEEQKHCVRIADEKVALATQTYDLVDAHIXQLDQFMRKLE 461
              +++   +       C   +D+KV LA QTY++VD HI +LD  + + E
Sbjct: 58  PDQRVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFE 108

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>ING3_HUMAN (Q9NXR8) Inhibitor of growth protein 3 (p47ING3 protein)|
          Length = 418

 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 38/113 (33%), Positives = 56/113 (49%)
 Frame = +3

Query: 123 MGFLEDFQASVETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSIT 302
           M +LED+   +E LP  L   ++ MRE+D  +Q    + EQR  +   + K         
Sbjct: 1   MLYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREE 60

Query: 303 TYEPAKLKFSDEAIEEQKHCVRIADEKVALATQTYDLVDAHIXQLDQFMRKLE 461
                K  +  +A+E+       ADEKV LA Q YDLVD H+ +LDQ + K +
Sbjct: 61  QMASIKKDYY-KALED-------ADEKVQLANQIYDLVDRHLRKLDQELAKFK 105

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>ING3_MOUSE (Q8VEK6) Inhibitor of growth protein 3 (p47ING3 protein)|
          Length = 421

 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 38/113 (33%), Positives = 56/113 (49%)
 Frame = +3

Query: 123 MGFLEDFQASVETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSIT 302
           M +LED+   +E LP  L   ++ MRE+D  +Q    + EQR  +   + K         
Sbjct: 1   MLYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREE 60

Query: 303 TYEPAKLKFSDEAIEEQKHCVRIADEKVALATQTYDLVDAHIXQLDQFMRKLE 461
                K  +  +A+E+       ADEKV LA Q YDLVD H+ +LDQ + K +
Sbjct: 61  QMASIKKDYY-KALED-------ADEKVQLANQIYDLVDRHLRKLDQELAKFK 105

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>ING1_MOUSE (Q9QXV3) Inhibitor of growth protein 1|
          Length = 279

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
 Frame = +3

Query: 123 MGFLEDFQASVETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSIT 302
           + ++ED+  S+E+LP  L +N SLMRE+D   Q +         +E++D           
Sbjct: 13  VNYVEDYLDSIESLPFDLQRNVSLMREIDAKYQEI--------LKELDDY---------- 54

Query: 303 TYEPAKLKFSDEAIEEQKHCVR--------IADEKVALATQTYDLVDAHIXQLDQFMRKL 458
            YE  K +          HC++        + DEK+ + +Q  +LV+    Q+D  +   
Sbjct: 55  -YEKFKRETDGTQKRRVLHCIQRALIRSQELGDEKIQIVSQMVELVENRSRQVDSHVELF 113

Query: 459 E 461
           E
Sbjct: 114 E 114

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>ING2_MOUSE (Q9ESK4) Inhibitor of growth protein 2 (p33ING2) (Inhibitor of|
           growth 1-like protein)
          Length = 281

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
 Frame = +3

Query: 129 FLEDFQASVETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSITTY 308
           +++D+   VE+LP  + +N S++RELD           Q   +EI+D+           Y
Sbjct: 28  YVQDYLECVESLPHDMQRNVSVLRELDNKY--------QETLKEIDDV-----------Y 68

Query: 309 EPAKLKFSDEAIEE---QKHCVR-------IADEKVALATQTYDLVDAHIXQLD 440
           E  K K  D++ ++   Q+H  R       + DEK+ + TQ  +LV+    Q++
Sbjct: 69  E--KYKKEDDSNQKKRLQQHLQRALINSQELGDEKIQIVTQMLELVENRARQME 120

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>ING2_HUMAN (Q9H160) Inhibitor of growth protein 2 (p33ING2) (Inhibitor of|
           growth 1-like protein) (ING1Lp) (p32)
          Length = 280

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 24/104 (23%), Positives = 48/104 (46%)
 Frame = +3

Query: 129 FLEDFQASVETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSITTY 308
           +++D+   VE+LP  + +N S++RELD           Q   +EI+D+    +       
Sbjct: 27  YVQDYLECVESLPHDMQRNVSVLRELDNKY--------QETLKEIDDVYEKYKKEDDLNQ 78

Query: 309 EPAKLKFSDEAIEEQKHCVRIADEKVALATQTYDLVDAHIXQLD 440
           +    +    A+   +    + DEK+ + TQ  +LV+    Q++
Sbjct: 79  KKRLQQLLQRALINSQ---ELGDEKIQIVTQMLELVENRARQME 119

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>MYO10_HUMAN (Q9HD67) Myosin-10 (Myosin X)|
          Length = 2058

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 25/94 (26%), Positives = 47/94 (50%)
 Frame = +3

Query: 180  KNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSITTYEPAKLKFSDEAIEEQKH 359
            K   L REL+K  +  Q+E   R ++EIED++   E   ++  E +  K  +   +E   
Sbjct: 870  KEAELTRELEKQKENKQVEEILRLEKEIEDLQRMKEQQELSLTEASLQKLQERRDQE--- 926

Query: 360  CVRIADEKVALATQTYDLVDAHIXQLDQFMRKLE 461
             +R  +E+   A Q + L   +  ++D+ +R +E
Sbjct: 927  -LRRLEEEACRAAQEF-LESLNFDEIDECVRNIE 958

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>MYO10_BOVIN (P79114) Myosin-10 (Myosin X)|
          Length = 2052

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 28/106 (26%), Positives = 49/106 (46%)
 Frame = +3

Query: 144  QASVETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSITTYEPAKL 323
            Q  +E L     +   L REL+K  +  Q+E   R ++EIED++   E   ++  E +  
Sbjct: 859  QRELEALQQESQRAAELSRELEKQKENKQVEEILRLEKEIEDLQRMKERQELSLTEASLQ 918

Query: 324  KFSDEAIEEQKHCVRIADEKVALATQTYDLVDAHIXQLDQFMRKLE 461
            K      EE +   R+ DE    A +   L   +  ++D+ +R +E
Sbjct: 919  KLQQLRDEELR---RLEDEACRAAQEF--LESLNFDEIDECVRNIE 959

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>YNG2_KLULA (Q6CXN0) Chromatin modification-related protein YNG2 (ING1 homolog|
           2)
          Length = 295

 Score = 33.9 bits (76), Expect = 0.21
 Identities = 29/116 (25%), Positives = 48/116 (41%)
 Frame = +3

Query: 117 DAMGFLEDFQASVETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGS 296
           D    LE     V  L +  H     M+  DK+L       EQ  +++    K   + GS
Sbjct: 10  DPSSALEQATQDVANLKSEFHHIMDEMQVADKTLVS---SREQYLREDYVLHKLVKQHGS 66

Query: 297 ITTYEPAKLKFSDEAIEEQKHCVRIADEKVALATQTYDLVDAHIXQLDQFMRKLEE 464
           +T  +P +   ++   +E K C  +  +K  LA     LV  H+ ++   +  LEE
Sbjct: 67  LTK-DPKEGSITETVEKEMKRCGDLQQQKCILANTALYLVTKHLSKIKANIESLEE 121

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>UBP5_ARATH (O22207) Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 5)
           (Ubiquitin-specific-processing protease 5)
           (Deubiquitinating enzyme 5) (AtUBP5)
          Length = 924

 Score = 33.9 bits (76), Expect = 0.21
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +3

Query: 177 HKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSI 299
           H+ YSLM +LDK+L    L+ +Q    E+ DI   L S  I
Sbjct: 209 HQKYSLMNDLDKTLDDANLQMDQDILVEVLDINGTLSSAHI 249

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>STX_APLCA (Q16932) Syntaxin|
          Length = 290

 Score = 33.9 bits (76), Expect = 0.21
 Identities = 20/83 (24%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
 Frame = +3

Query: 117 DAMGFLEDFQASVETLPAMLHKNYSLMRELDKSLQGV--QLENEQRCQQEIEDIKHGLES 290
           D+ GF+E+F   V+ +  M+ K  S + E+ K    +    + + + ++E+E++   ++ 
Sbjct: 27  DSSGFMEEFFEQVDEIREMIDKIASNVDEVKKKHSAILSAPQTDDKMKEELEELMSEIKK 86

Query: 291 GSITTYEPAKLKFSDEAIEEQKH 359
            +      AKLK  ++ IE+++H
Sbjct: 87  NA--NKVRAKLKVIEQNIEQEEH 107

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>KIFC2_MOUSE (O08672) Kinesin-like protein KIFC2|
          Length = 792

 Score = 32.0 bits (71), Expect = 0.81
 Identities = 18/59 (30%), Positives = 32/59 (54%)
 Frame = +3

Query: 117 DAMGFLEDFQASVETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESG 293
           +  G L++ Q + E L   L      ++ L  +L+ +Q E EQ C+QE++ + HG  +G
Sbjct: 278 ELQGQLQEAQDTTEALRVQLGAQELQLQGLRGALRQLQQETEQNCRQELQQV-HGQLAG 335

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>MYSP_BOOMI (Q86RN8) Paramyosin|
          Length = 873

 Score = 32.0 bits (71), Expect = 0.81
 Identities = 25/115 (21%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
 Frame = +3

Query: 129 FLEDFQASVETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSITTY 308
           +L++      +L  + H    L  +L+ + +  +LE+E+R +  +E   H LE       
Sbjct: 209 YLKEVHELKVSLDNVNHLKSQLATQLEDTRR--RLEDEERKRASLESSMHTLE----VEI 262

Query: 309 EPAKLKFSDEA---IEEQKHCVRIADEKVALATQTYDLVDAHIXQLDQFMRKLEE 464
           E  K++  +E+   +E ++  V+   +  A  T+    V AH  ++++  RK+ +
Sbjct: 263 ESLKVQLEEESEARLEVERQLVKANADAAAYKTKYETEVQAHADEVEELRRKMAQ 317

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>UACA_MOUSE (Q8CGB3) Uveal autoantigen with coiled-coil domains and ankyrin|
            repeats protein (Nucling) (Nuclear membrane-binding
            protein)
          Length = 1411

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
 Frame = +3

Query: 120  AMGFLEDFQASVETLPAMLHKNYSLMRELDKSLQGVQ--LENEQRCQQEIEDIKHGLESG 293
            A   L+     +E + A+       + +L + L+  Q  LE EQ+   +++ +    ++ 
Sbjct: 1105 AQNLLQKQPVPLEQVEALKKSLNGTIEQLKEELRSKQRCLEREQQTVSQLQQLLENQKNS 1164

Query: 294  SITTYEPAKLKFSDEAIEEQ----KHCVRIADEKVALATQTYDLVDAHIXQLDQFMRKLE 461
            S+T  E  KLK   EA+E++    K  +R  +E+    T+    +   +    Q ++ LE
Sbjct: 1165 SVTLAEHLKLK---EALEKEVGIMKASLREKEEESQKKTKEVSKLQTEVQTTKQALKNLE 1221

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>YNG2_DEBHA (Q6BNL6) Chromatin modification-related protein YNG2 (ING1 homolog|
           2)
          Length = 285

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 24/116 (20%), Positives = 46/116 (39%)
 Frame = +3

Query: 117 DAMGFLEDFQASVETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGS 296
           D    L+ +   +  LP  +      ++  D  LQ    E  +R Q +   I   + +  
Sbjct: 2   DTTTVLDKYTQDLSNLPLEVKHLLQELKNKDVQLQ----EARKRYQTKDNQIHKFIRANG 57

Query: 297 ITTYEPAKLKFSDEAIEEQKHCVRIADEKVALATQTYDLVDAHIXQLDQFMRKLEE 464
             T  P + +  ++  E+     ++  EK+ LA     LV  H+   +  + KLE+
Sbjct: 58  TLTKHPKEQQIYNKVEEDMVLVKKLQKEKILLANTALFLVSKHLSNFETDIAKLEK 113

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>TGA1A_TOBAC (P14232) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a)|
           (ASF-1 protein)
          Length = 359

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 30/112 (26%), Positives = 51/112 (45%)
 Frame = +3

Query: 123 MGFLEDFQASVETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSIT 302
           +G  +DF +S  +  A      +++ E+DK L+      E+R   E ED  HG   G+  
Sbjct: 10  LGMWDDFNSSFPSTSA------TMILEVDKCLEDQIPIMEKRLDNETEDTSHG-TVGTSN 62

Query: 303 TYEPAKLKFSDEAIEEQKHCVRIADEKVALATQTYDLVDAHIXQLDQFMRKL 458
            YEP   K  ++ +       R+A  + A A ++     A++ QL+    KL
Sbjct: 63  RYEPETSKPVEKVLR------RLAQNREA-ARKSRLRKKAYVQQLENSKLKL 107

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>SYP51_ARATH (Q9SA23) Syntaxin-51 (AtSYP51)|
          Length = 232

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
 Frame = +3

Query: 279 GLESGSITTYEPAKLKFSDEAIEE-------QKHCVRIADEKVALATQTYDLVDAHIXQL 437
           G+++  I  Y+   ++  DE +E+        KH      E++ L T+  D +D H+   
Sbjct: 125 GMDNQGIVGYQRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLDYHVDVT 184

Query: 438 DQFMRKLEE 464
           D  +R++++
Sbjct: 185 DSRLRRVQK 193

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>TRI29_MOUSE (Q8R2Q0) Tripartite motif protein 29|
          Length = 587

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = +3

Query: 168 AMLHKNY-SLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSITTYEPAKLKFSDEAI 344
           A+L +N+  L+REL+K  + V+   EQR Q  ++ +K  +++      E AK+   D+  
Sbjct: 308 AILEQNFRDLVRELEKQKEEVRAALEQREQDAVDQVKVIVDA----LDERAKVLHEDKQT 363

Query: 345 EEQKH 359
            EQ H
Sbjct: 364 REQLH 368

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>PLEC1_HUMAN (Q15149) Plectin-1 (PLTN) (PCN) (Hemidesmosomal protein 1) (HD1)|
          Length = 4684

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
 Frame = +3

Query: 117  DAMGF-LEDFQASVETLPAMLHKNYSLMRELDKSLQGVQLENE-QRCQQEIEDIKHGLES 290
            DA GF  ED   +     +  H    L++ L+   QG Q E+  QRC  E++DI+  LE+
Sbjct: 1079 DAGGFGPEDRLMAEREYGSCSHHYQQLLQSLE---QGAQEESRCQRCISELKDIRLQLEA 1135

Query: 291  GSITTYEPAKLKFSDEAIEEQKHCVRIADEKVALA 395
                T    +L    E   E     RIA+++ A A
Sbjct: 1136 CETRTVHRLRLPLDKEPARECAQ--RIAEQQKAQA 1168

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>CL190_DROME (Q9VJE5) Restin homolog (Cytoplasmic linker protein 190)|
            (Microtubule-binding protein 190) (d-CLIP-190)
          Length = 1690

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 27/118 (22%), Positives = 51/118 (43%), Gaps = 14/118 (11%)
 Frame = +3

Query: 153  VETLPAMLHKNYSLMRELDKSLQ--GVQLENEQRCQQEIED-IKHGLESGSITTYEPAKL 323
            V+ L   + ++ S++   +  L    VQLEN+  C +E +D +    +       E AKL
Sbjct: 1240 VQNLEEKVRESSSIIEAQNTKLNESNVQLENKTSCLKETQDQLLESQKKEKQLQEEAAKL 1299

Query: 324  KFSDEAIEEQ-----------KHCVRIADEKVALATQTYDLVDAHIXQLDQFMRKLEE 464
                + ++E            +  V++ +EK+  AT   D   A   +L + + K +E
Sbjct: 1300 SGELQQVQEANGDIKDSLVKVEELVKVLEEKLQAATSQLDAQQATNKELQELLVKSQE 1357

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>MFP1_LYCES (P93203) MAR binding filament-like protein 1|
          Length = 697

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 16/59 (27%), Positives = 36/59 (61%)
 Frame = +3

Query: 222 GVQLENEQRCQQEIEDIKHGLESGSITTYEPAKLKFSDEAIEEQKHCVRIADEKVALAT 398
           G +L+NE++  ++++    GL++  + T E  K K  +E ++E+   +++ +EK+ L T
Sbjct: 200 GQELQNEKKLAEDLKFEIKGLQNDLMNTKEDKK-KLQEE-LKEKLDLIQVLEEKITLLT 256

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>SAS6_HUMAN (Q6UVJ0) Spindle assembly abnormal protein 6 homolog (HsSAS-6)|
          Length = 657

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
 Frame = +3

Query: 132 LEDFQASVETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSITTYE 311
           L + +A+ + L    +K  S +REL   L GV+ E  QR +QE+  ++    +  +  +E
Sbjct: 254 LSELEAANKDLTERKYKGDSTIRELKAKLSGVE-EELQRTKQEVLSLRRENSTLDVECHE 312

Query: 312 PAK----LKFSDEAIEEQKHCVRIADEKVALATQTYDLVDAHIXQLDQ 443
             K    L+     +E++   ++  D+ V    + +D +      L++
Sbjct: 313 KEKHVNQLQTKVAVLEQE---IKDKDQLVLRTKEAFDTIQEQKVVLEE 357

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>SRP68_MOUSE (Q8BMA6) Signal recognition particle 68 kDa protein (SRP68)|
          Length = 625

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
 Frame = +3

Query: 180 KNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSITTYEPAKLKFSDE----AIE 347
           K + L+  L K+++  + E E+ C+    D K  LE+ + T Y    L+F  +    AIE
Sbjct: 150 KRFHLLSRLRKAVKHAE-ELERLCESNQVDAKTKLEAQAYTAYLSGMLRFEHQEWKSAIE 208

Query: 348 EQKHCVRIADEKVALATQ 401
               C  I ++  +  T+
Sbjct: 209 AFNKCKTIYEKLASAFTE 226

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>TPS1_EMENI (O59921) Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC|
           2.4.1.15) (Trehalose-6-phosphate synthase)
           (UDP-glucose-glucosephosphate glucosyltransferase)
          Length = 504

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +3

Query: 306 YEPAKLKFSDEAIEEQKHCVRIADEKVALATQTYDLV---DAHIXQLDQFMRK 455
           Y P ++ F + A E  K   R+  + VA   Q  DL+   D H+  L + +R+
Sbjct: 111 YHPGEITFDESAWEAYKEANRLFAQAVASQVQDGDLIWVHDYHLMLLPEMLRE 163

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>SRP68_HUMAN (Q9UHB9) Signal recognition particle 68 kDa protein (SRP68)|
          Length = 627

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
 Frame = +3

Query: 180 KNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSITTYEPAKLKFSDE----AIE 347
           K + L+  L K+++  + E E+ C+    D K  LE+ + T Y    L+F  +    AIE
Sbjct: 151 KRFHLLSRLRKAVKHAE-ELERLCESNRVDAKTKLEAQAYTAYLSGMLRFEHQEWKAAIE 209

Query: 348 EQKHCVRIADEKVALATQ 401
               C  I ++  +  T+
Sbjct: 210 AFNKCKTIYEKLASAFTE 227

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>YNG2_CANAL (Q5AHB8) Chromatin modification-related protein YNG2 (ING1 homolog|
           2)
          Length = 298

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 25/115 (21%), Positives = 45/115 (39%)
 Frame = +3

Query: 117 DAMGFLEDFQASVETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGS 296
           D    LE +   +  LP  +     L+ E+ KS      E  +R Q     +   + +  
Sbjct: 2   DTSTVLEKYTQDLSNLPLEVRH---LLEEI-KSKDVQVSEARKRYQTRDHQLHKFIRTNG 57

Query: 297 ITTYEPAKLKFSDEAIEEQKHCVRIADEKVALATQTYDLVDAHIXQLDQFMRKLE 461
             T  P + +   +  E+ K   ++  EK+ LA     L+  H+   +  + KLE
Sbjct: 58  TLTKHPKEDQLYSKIEEDMKLVQKLQKEKILLANTALFLISKHLYHFETDIAKLE 112

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>TRUB_VIBVY (Q7MI11) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 314

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 17/71 (23%), Positives = 32/71 (45%)
 Frame = +3

Query: 150 SVETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSITTYEPAKLKF 329
           ++ETL A + K      ++      ++ + +   +   + I+   ES  IT YE    +F
Sbjct: 103 TLETLEACIEKFRGESDQVPSMFSALKYQGKPLYEYARKGIEVPRESRKITVYEITLHRF 162

Query: 330 SDEAIEEQKHC 362
             E +E + HC
Sbjct: 163 EGEEVEMEVHC 173

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>TRUB_VIBVU (Q8DBV8) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 314

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 17/71 (23%), Positives = 32/71 (45%)
 Frame = +3

Query: 150 SVETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSITTYEPAKLKF 329
           ++ETL A + K      ++      ++ + +   +   + I+   ES  IT YE    +F
Sbjct: 103 TLETLEACIEKFRGESDQVPSMFSALKYQGKPLYEYARKGIEVPRESRKITVYEITLHRF 162

Query: 330 SDEAIEEQKHC 362
             E +E + HC
Sbjct: 163 EGEEVEMEVHC 173

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>TRUB_YERPS (Q66F58) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 324

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
 Frame = +3

Query: 132 LEDFQASVETLPAMLHKNYSLMRELDKSL-----QGVQLENEQRCQQEIEDIKHGLESGS 296
           LE F+   + +P+M    YS ++   K L     QG+++E E R               S
Sbjct: 112 LESFRGESQQIPSM----YSALKHQGKPLYEYARQGIEVEREAR---------------S 152

Query: 297 ITTYEPAKLKFSDEAIEEQKHC 362
           IT YE   +++    +E + HC
Sbjct: 153 ITVYELLFIRWEGNDLELEIHC 174

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>TRUB_YERPE (Q8ZBC4) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 324

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
 Frame = +3

Query: 132 LEDFQASVETLPAMLHKNYSLMRELDKSL-----QGVQLENEQRCQQEIEDIKHGLESGS 296
           LE F+   + +P+M    YS ++   K L     QG+++E E R               S
Sbjct: 112 LESFRGESQQIPSM----YSALKHQGKPLYEYARQGIEVEREAR---------------S 152

Query: 297 ITTYEPAKLKFSDEAIEEQKHC 362
           IT YE   +++    +E + HC
Sbjct: 153 ITVYELLFIRWEGNDLELEIHC 174

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>SRP68_CANFA (Q00004) Signal recognition particle 68 kDa protein (SRP68)|
          Length = 622

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
 Frame = +3

Query: 180 KNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSITTYEPAKLKFSDE----AIE 347
           K + L+  L K+++  + E E+ C+    D K  LE+ + T Y    L+F  +    AIE
Sbjct: 148 KRFHLLSRLRKAVKHAE-ELERLCESNRVDAKTKLEAQAYTAYLSGMLRFEHQEWKAAIE 206

Query: 348 EQKHCVRIADEKVALATQ 401
               C  I ++  +  T+
Sbjct: 207 AFNKCKTIYEKLASAFTE 224

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>CD2L7_HUMAN (Q9NYV4) Cell division cycle 2-related protein kinase 7 (EC|
           2.7.11.22) (CDC2-related protein kinase 7) (Cdc2-related
           kinase, arginine/serine-rich) (CrkRS)
          Length = 1490

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 79  AYRFHGRRGGRSPTPWGSSRTSRPVL 156
           +Y   G   GRSP+P+G  R+S P L
Sbjct: 312 SYERSGSYSGRSPSPYGRRRSSSPFL 337

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>TPSA_ASPNG (Q00075) Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1|
           (EC 2.4.1.15) (Trehalose-6-phosphate synthase)
           (UDP-glucose-glucosephosphate glucosyltransferase)
          Length = 517

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +3

Query: 306 YEPAKLKFSDEAIEEQKHCVRIADEKVALATQTYDLV---DAHIXQLDQFMRK 455
           Y P ++ F + A E  K   R+  + VA   Q  DL+   D H+  L + +R+
Sbjct: 112 YHPGEITFDESAWEAYKEANRLFAKAVAKEVQDGDLIWVHDYHLMLLPEMLRE 164

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>SAS6_MOUSE (Q80UK7) Spindle assembly abnormal protein 6 homolog|
          Length = 654

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
 Frame = +3

Query: 132 LEDFQASVETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSITTYE 311
           L + +A+ + L    +K  S +REL   L GV+ E  QR +QE+  ++   E+ ++ T  
Sbjct: 254 LSELEAANKELTERKYKGDSTVRELKAKLAGVE-EELQRAKQEVLSLRR--ENCTLDTEC 310

Query: 312 PAKLKFSDE-----AIEEQKHCVRIADEKVALATQTYDLVDAHIXQLDQ 443
             K K  ++     A+ EQ+  ++  D+ V    + +D +      L++
Sbjct: 311 HEKEKHINQLQTKVAVLEQE--IKDKDQLVLRTKEAFDTIQEQKVALEE 357

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>PSBA_MESVI (Q9MUW0) Photosystem Q(B) protein (32 kDa thylakoid membrane|
           protein) (Photosystem II protein D1)
          Length = 353

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = -3

Query: 376 SAILTQCFCSSIASSENLSFAGSYVVILPDSSPCLMSSIS 257
           SA L   FC  I S+EN  + G + VI+    PCL+++IS
Sbjct: 10  SANLWGRFCEFITSTENRLYIGWFGVIM---IPCLLTAIS 46

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>AKAP9_HUMAN (Q99996) A-kinase anchor protein 9 (Protein kinase A-anchoring|
            protein 9) (PRKA9) (A-kinase anchor protein 450 kDa)
            (AKAP 450) (A-kinase anchor protein 350 kDa) (AKAP 350)
            (hgAKAP 350) (AKAP 120-like protein) (Hyperion protein)
            (Yotiao protei
          Length = 3911

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 22/85 (25%), Positives = 40/85 (47%)
 Frame = +3

Query: 156  ETLPAMLHKNYSLMRELDKSLQGVQLENEQRCQQEIEDIKHGLESGSITTYEPAKLKFSD 335
            +TL +   K+  L   L+K    +   +E+R ++E+ED+K  LES      +   L    
Sbjct: 3212 DTLASEQKKSRELQWALEKEKAKLG-RSEERDKEELEDLKFSLESQKQRNLQLNLL---- 3266

Query: 336  EAIEEQKHCVRIADEKVALATQTYD 410
              +E+QK  +  + +K+      YD
Sbjct: 3267 --LEQQKQLLNESQQKIESQRMLYD 3289

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>PLEC1_CRIGR (Q9JI55) Plectin-1 (PLTN) (PCN) (300-kDa intermediate|
            filament-associated protein) (IFAP300) (Fragment)
          Length = 4473

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
 Frame = +3

Query: 117  DAMGFLEDFQASVETLPAMLHKNYS-LMRELDKSLQGVQLENE-QRCQQEIEDIKHGLES 290
            DA GF  + +   E       ++Y  L++ L+   QG Q E+  QRC  E++DI+  LE+
Sbjct: 868  DAGGFGPEDRLVAEREYGSCSRHYQQLLQSLE---QGEQEESRCQRCISELKDIRLQLEA 924

Query: 291  GSITTYEPAKLKFSDEAIEEQKHCVRIADEKVALA 395
                T    +L    E   E     RIA+++ A A
Sbjct: 925  CETRTVHRLRLPLDKEPARECAQ--RIAEQQKAQA 957


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,354,715
Number of Sequences: 219361
Number of extensions: 1009808
Number of successful extensions: 3483
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 3382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3474
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result