>ZN313_BOVIN (Q4U5R4) Zinc finger protein 313|
          Length = 230

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
 Frame = +1

Query: 229 YNCPFCGE-DFDFVGLCCHIDDEHAVEAKSGICPICATRV-------GVDLIGHLTMQH 381
           + CP+C E +FD  GL  H    H+ + KS +CPICA+           + I HL  +H
Sbjct: 143 FPCPYCPEKNFDQEGLVEHCKLSHSTDTKSVVCPICASMPWGDPNYRSANFIEHLQRRH 201

>ZN313_RAT (Q6J2U6) Zinc finger protein 313|
          Length = 229

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +1

Query: 229 YNCPFCGE-DFDFVGLCCHIDDEHAVEAKSGICPICAT 339
           + CP+C E +FD  GL  H    H+ + KS +CPICA+
Sbjct: 142 FPCPYCPEKNFDQEGLVEHCKLTHSTDTKSVVCPICAS 179

>ZN313_MOUSE (Q9ET26) Zinc finger protein 313|
          Length = 229

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +1

Query: 229 YNCPFCGE-DFDFVGLCCHIDDEHAVEAKSGICPICAT 339
           + CP+C E +FD  GL  H    H+ + KS +CPICA+
Sbjct: 142 FPCPYCPEKNFDQEGLVEHCKLTHSTDTKSVVCPICAS 179

>ZN313_PIG (Q6J1I8) Zinc finger protein 313|
          Length = 228

 Score = 38.1 bits (87), Expect = 0.014
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +1

Query: 229 YNCPFCGE-DFDFVGLCCHIDDEHAVEAKSGICPICAT 339
           + CP+C E +FD  GL  H    H+ + KS +CPICA+
Sbjct: 141 FPCPYCPEKNFDQEGLVEHCKLVHSTDTKSVVCPICAS 178

>ZN313_PANTR (Q6J212) Zinc finger protein 313|
          Length = 228

 Score = 37.7 bits (86), Expect = 0.018
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +1

Query: 229 YNCPFCGE-DFDFVGLCCHIDDEHAVEAKSGICPICAT 339
           + CP+C E +FD  GL  H    H+ + KS +CPICA+
Sbjct: 141 FPCPYCPEKNFDQEGLVEHCKLFHSTDTKSVVCPICAS 178

>ZN313_HUMAN (Q9Y508) Zinc finger protein 313 (RING finger protein 114)|
          Length = 228

 Score = 37.7 bits (86), Expect = 0.018
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +1

Query: 229 YNCPFCGE-DFDFVGLCCHIDDEHAVEAKSGICPICAT 339
           + CP+C E +FD  GL  H    H+ + KS +CPICA+
Sbjct: 141 FPCPYCPEKNFDQEGLVEHCKLFHSTDTKSVVCPICAS 178

>RN125_MOUSE (Q9D9R0) RING finger protein 125 (EC 6.3.2.-)|
          Length = 232

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 7/60 (11%)
 Frame = +1

Query: 235 CPFCGEDFDFVGLCCHIDDEHAVEAKSGICPICATR-------VGVDLIGHLTMQHGSYF 393
           CPFC  + D   L  H    H  E +   CP+C +R           LI HL + H  ++
Sbjct: 141 CPFCQRELDEDCLLDHCIIHHRSERRPVFCPLCHSRPDESPSTFNGSLIRHLQVSHTLFY 200

>ZPR1_CAEEL (O16999) Zinc-finger protein ZPR1 homolog|
          Length = 455

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 19/59 (32%), Positives = 25/59 (42%)
 Frame = +1

Query: 235 CPFCGEDFDFVGLCCHIDDEHAVEAKSGICPICATRVGVDLIGHLTMQHGSYFKRRVRK 411
           CP C ED +   +C  I    AV   S  CP C  +      G    +HG+    RV+K
Sbjct: 28  CPVCEEDGETRIMCTSIPYYRAVILMSFECPHCGHKNNEIQSGEAVQEHGTLIVLRVQK 86

>RN125_MACFA (Q95KF1) RING finger protein 125 (EC 6.3.2.-)|
          Length = 231

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 7/60 (11%)
 Frame = +1

Query: 235 CPFCGEDFDFVGLCCHIDDEHAVEAKSGICPIC-------ATRVGVDLIGHLTMQHGSYF 393
           CPFC  + D   L  H    H  E +   CP+C        +     LI HL + H  ++
Sbjct: 140 CPFCQRELDEDSLLDHCITHHRSERRPVFCPLCRLIPDENPSSFSGSLIRHLQVSHTLFY 199

>MCPH1_HYLLA (P61592) Microcephalin|
          Length = 840

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -3

Query: 350 TPTLVAQMGHIPLLASTACSSSMWQQRPTKSKSSPQKGQ 234
           +PTL +  GH+ L+ S   SSS+ +QR +    SP KG+
Sbjct: 333 SPTLSSTKGHL-LIRSRPSSSSVKRQRVSHGSHSPSKGK 370

>SUHW1_HUMAN (P59817) Suppressor of hairy wing homolog 1 (3'OY11.1)|
          Length = 542

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
 Frame = +1

Query: 235 CPFCGEDFDF-VGLCCHIDDEHAVEAKSGICPICATRVGVD--LIGHLTMQH 381
           C  C   F     L CHID  H     S +C IC      D  L+ H+   H
Sbjct: 336 CQHCHRQFPTPFQLQCHIDSVHIAMGPSAVCKICELSFETDQVLLQHMKDHH 387

>VG47_BPMU (Q9T1V2) Protein gp47|
          Length = 360

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +2

Query: 143 ACSPATICTWGSTTRTPAGTRWRRA 217
           A  P T+ T  +TT  PAGTRW+RA
Sbjct: 87  ASGPLTVTTSAATT-IPAGTRWQRA 110

>SYL_VIBVY (Q7MN06) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 857

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 324 PHLCYEGWGGL-DRPLDNAAWKLLQAQS 404
           PH+C+E W  L  + +DNA+W     Q+
Sbjct: 764 PHICFEMWTALGQQDIDNASWPTYDEQA 791

>SYL_VIBVU (Q8DFE2) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 857

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 324 PHLCYEGWGGL-DRPLDNAAWKLLQAQS 404
           PH+C+E W  L  + +DNA+W     Q+
Sbjct: 764 PHICFEMWTALGQQDIDNASWPTYDEQA 791

>SINA4_ARATH (Q9STN8) Ubiquitin ligase SINAT4 (EC 6.3.2.-) (Seven in absentia|
           homolog 4)
          Length = 327

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
 Frame = +1

Query: 229 YNCPFCGEDFDFVG----LCCHIDDEHAVEAKSG 318
           Y+CP+ G +   VG    L  H+ D+H V+  +G
Sbjct: 150 YSCPYAGSECGIVGDIPFLVAHLRDDHKVDMHAG 183

>RN125_HUMAN (Q96EQ8) RING finger protein 125 (EC 6.3.2.-) (T-cell RING|
           activation protein 1) (TRAC-1)
          Length = 231

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 7/60 (11%)
 Frame = +1

Query: 235 CPFCGEDFDFVGLCCHIDDEHAVEAKSGICPIC-------ATRVGVDLIGHLTMQHGSYF 393
           CPFC  +     L  H    H  E +   CP+C        +     LI HL + H  ++
Sbjct: 140 CPFCQRELYEDSLLDHCITHHRSERRPVFCPLCRLIPDENPSSFSGSLIRHLQVSHTLFY 199

>SUHW2_HUMAN (Q86YH2) Suppressor of hairy wing homolog 2 (5'OY11.1) (Zinc finger|
           protein 632)
          Length = 543

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
 Frame = +1

Query: 235 CPFCGEDFDF-VGLCCHIDDEHAVEAKSGICPICATRVGVD--LIGHLTMQH 381
           C  C   F     L CHI++ H  +  S +C IC      D  L+ H+   H
Sbjct: 345 CQHCHRQFPTPFQLQCHIENVHTAQEPSTVCKICELSFETDQVLLQHMKDHH 396


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,742,178
Number of Sequences: 219361
Number of extensions: 907784
Number of successful extensions: 3527
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3527
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3696665728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)