ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart07f04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK101263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032J06, full insert sequence Length = 1287 Score = 307 bits (155), Expect = 2e-80 Identities = 236/260 (90%), Gaps = 6/260 (2%) Strand = Plus / Plus Query: 139 aggcgcctgcagtcccgctacgatctgtacatggggttcgacgacgcggacgccg---gc 195 |||||||||||| | |||||||||||||||||||||||||||||||||||||| | || Sbjct: 210 aggcgcctgcaggcgcgctacgatctgtacatggggttcgacgacgcggacgcggcgggc 269 Query: 196 ggggacgaggtggaggcgcgcgg-ggcgg--aggcctacaactgccccttttgcggcgag 252 | ||| ||||||||||||||||| ||||| |||| |||||||||||||| ||||||||| Sbjct: 270 gtggaggaggtggaggcgcgcggcggcggggaggcgtacaactgccccttctgcggcgag 329 Query: 253 gatttcgatttcgtaggcctctgctgccacatcgacgacgagcacgccgtcgaggccaag 312 || ||||| ||||| | | ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 330 gacttcgacttcgtcgccttctgctgccacgtcgacgacgagcacgccgtcgaggccaag 389 Query: 313 agcgggatatgccccatctgtgctacgagggttggggtggacttgataggccacttgaca 372 |||||| |||| |||||||||||||| |||||||| |||||||||||||| ||||||||| Sbjct: 390 agcggggtatgtcccatctgtgctacaagggttggagtggacttgataggtcacttgaca 449 Query: 373 atgcagcatggaagttactt 392 |||||||||||||||||||| Sbjct: 450 atgcagcatggaagttactt 469 Score = 153 bits (77), Expect = 7e-34 Identities = 101/109 (92%) Strand = Plus / Plus Query: 400 agagtccgaaaagtatctcctgggtcccattctttgctgtctttgttgagaaaggattta 459 |||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||| ||| Sbjct: 489 agagtccgaaaaatatcttcagggtcccattctttgttgtctttgttgagaaaggactta 548 Query: 460 agagacggcagattgcagtcctttcttggtggatcatcctatgtatcta 508 ||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 549 agagatggcagtctgcagtcctttcttggtggatcatcctatgtatcta 597 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 gaggcgaggctagggtttcg 54 |||||||||||||||||||| Sbjct: 108 gaggcgaggctagggtttcg 127
>dbj|AK061141.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-C03, full insert sequence Length = 1248 Score = 307 bits (155), Expect = 2e-80 Identities = 236/260 (90%), Gaps = 6/260 (2%) Strand = Plus / Plus Query: 139 aggcgcctgcagtcccgctacgatctgtacatggggttcgacgacgcggacgccg---gc 195 |||||||||||| | |||||||||||||||||||||||||||||||||||||| | || Sbjct: 141 aggcgcctgcaggcgcgctacgatctgtacatggggttcgacgacgcggacgcggcgggc 200 Query: 196 ggggacgaggtggaggcgcgcgg-ggcgg--aggcctacaactgccccttttgcggcgag 252 | ||| ||||||||||||||||| ||||| |||| |||||||||||||| ||||||||| Sbjct: 201 gtggaggaggtggaggcgcgcggcggcggggaggcgtacaactgccccttctgcggcgag 260 Query: 253 gatttcgatttcgtaggcctctgctgccacatcgacgacgagcacgccgtcgaggccaag 312 || ||||| ||||| | | ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 261 gacttcgacttcgtcgccttctgctgccacgtcgacgacgagcacgccgtcgaggccaag 320 Query: 313 agcgggatatgccccatctgtgctacgagggttggggtggacttgataggccacttgaca 372 |||||| |||| |||||||||||||| |||||||| |||||||||||||| ||||||||| Sbjct: 321 agcggggtatgtcccatctgtgctacaagggttggagtggacttgataggtcacttgaca 380 Query: 373 atgcagcatggaagttactt 392 |||||||||||||||||||| Sbjct: 381 atgcagcatggaagttactt 400 Score = 153 bits (77), Expect = 7e-34 Identities = 101/109 (92%) Strand = Plus / Plus Query: 400 agagtccgaaaagtatctcctgggtcccattctttgctgtctttgttgagaaaggattta 459 |||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||| ||| Sbjct: 420 agagtccgaaaaatatcttcagggtcccattctttgttgtctttgttgagaaaggactta 479 Query: 460 agagacggcagattgcagtcctttcttggtggatcatcctatgtatcta 508 ||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 480 agagatggcagtctgcagtcctttcttggtggatcatcctatgtatcta 528 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 gaggcgaggctagggtttcg 54 |||||||||||||||||||| Sbjct: 39 gaggcgaggctagggtttcg 58
>gb|AC104272.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1045_C06, complete sequence Length = 143130 Score = 174 bits (88), Expect = 2e-40 Identities = 148/165 (89%), Gaps = 6/165 (3%) Strand = Plus / Minus Query: 160 gatctgtacatggggttcgacgacgcggacgccg---gcggggacgaggtggaggcgcgc 216 |||||||||||||||||||||||||||||||| | ||| ||| ||||||||||||||| Sbjct: 70713 gatctgtacatggggttcgacgacgcggacgcggcgggcgtggaggaggtggaggcgcgc 70654 Query: 217 gg-ggcgg--aggcctacaactgccccttttgcggcgaggatttcgatttcgtaggcctc 273 || ||||| |||| |||||||||||||| ||||||||||| ||||| ||||| | | || Sbjct: 70653 ggcggcggggaggcgtacaactgccccttctgcggcgaggacttcgacttcgtcgccttc 70594 Query: 274 tgctgccacatcgacgacgagcacgccgtcgaggccaagagcggg 318 ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 70593 tgctgccacgtcgacgacgagcacgccgtcgaggccaagagcggg 70549 Score = 153 bits (77), Expect = 7e-34 Identities = 101/109 (92%) Strand = Plus / Minus Query: 400 agagtccgaaaagtatctcctgggtcccattctttgctgtctttgttgagaaaggattta 459 |||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||| ||| Sbjct: 67354 agagtccgaaaaatatcttcagggtcccattctttgttgtctttgttgagaaaggactta 67295 Query: 460 agagacggcagattgcagtcctttcttggtggatcatcctatgtatcta 508 ||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 67294 agagatggcagtctgcagtcctttcttggtggatcatcctatgtatcta 67246 Score = 113 bits (57), Expect = 6e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 320 tatgccccatctgtgctacgagggttggggtggacttgataggccacttgacaatgcagc 379 |||| |||||||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 67584 tatgtcccatctgtgctacaagggttggagtggacttgataggtcacttgacaatgcagc 67525 Query: 380 atggaagttactt 392 ||||||||||||| Sbjct: 67524 atggaagttactt 67512 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gaggcgaggctagggtttcg 54 |||||||||||||||||||| Sbjct: 70964 gaggcgaggctagggtttcg 70945
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 174 bits (88), Expect = 2e-40 Identities = 148/165 (89%), Gaps = 6/165 (3%) Strand = Plus / Minus Query: 160 gatctgtacatggggttcgacgacgcggacgccg---gcggggacgaggtggaggcgcgc 216 |||||||||||||||||||||||||||||||| | ||| ||| ||||||||||||||| Sbjct: 16858217 gatctgtacatggggttcgacgacgcggacgcggcgggcgtggaggaggtggaggcgcgc 16858158 Query: 217 gg-ggcgg--aggcctacaactgccccttttgcggcgaggatttcgatttcgtaggcctc 273 || ||||| |||| |||||||||||||| ||||||||||| ||||| ||||| | | || Sbjct: 16858157 ggcggcggggaggcgtacaactgccccttctgcggcgaggacttcgacttcgtcgccttc 16858098 Query: 274 tgctgccacatcgacgacgagcacgccgtcgaggccaagagcggg 318 ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 16858097 tgctgccacgtcgacgacgagcacgccgtcgaggccaagagcggg 16858053 Score = 153 bits (77), Expect = 7e-34 Identities = 101/109 (92%) Strand = Plus / Minus Query: 400 agagtccgaaaagtatctcctgggtcccattctttgctgtctttgttgagaaaggattta 459 |||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||| ||| Sbjct: 16854858 agagtccgaaaaatatcttcagggtcccattctttgttgtctttgttgagaaaggactta 16854799 Query: 460 agagacggcagattgcagtcctttcttggtggatcatcctatgtatcta 508 ||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 16854798 agagatggcagtctgcagtcctttcttggtggatcatcctatgtatcta 16854750 Score = 113 bits (57), Expect = 6e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 320 tatgccccatctgtgctacgagggttggggtggacttgataggccacttgacaatgcagc 379 |||| |||||||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 16855088 tatgtcccatctgtgctacaagggttggagtggacttgataggtcacttgacaatgcagc 16855029 Query: 380 atggaagttactt 392 ||||||||||||| Sbjct: 16855028 atggaagttactt 16855016 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gaggcgaggctagggtttcg 54 |||||||||||||||||||| Sbjct: 16858468 gaggcgaggctagggtttcg 16858449
>dbj|AK070900.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073C10, full insert sequence Length = 3331 Score = 174 bits (88), Expect = 2e-40 Identities = 148/165 (89%), Gaps = 6/165 (3%) Strand = Plus / Plus Query: 160 gatctgtacatggggttcgacgacgcggacgccg---gcggggacgaggtggaggcgcgc 216 |||||||||||||||||||||||||||||||| | ||| ||| ||||||||||||||| Sbjct: 1942 gatctgtacatggggttcgacgacgcggacgcggcgggcgtggaggaggtggaggcgcgc 2001 Query: 217 gg-ggcgg--aggcctacaactgccccttttgcggcgaggatttcgatttcgtaggcctc 273 || ||||| |||| |||||||||||||| ||||||||||| ||||| ||||| | | || Sbjct: 2002 ggcggcggggaggcgtacaactgccccttctgcggcgaggacttcgacttcgtcgccttc 2061 Query: 274 tgctgccacatcgacgacgagcacgccgtcgaggccaagagcggg 318 ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2062 tgctgccacgtcgacgacgagcacgccgtcgaggccaagagcggg 2106 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 gaggcgaggctagggtttcg 54 |||||||||||||||||||| Sbjct: 1691 gaggcgaggctagggtttcg 1710
>gb|AY106338.1| Zea mays PCO074336 mRNA sequence Length = 849 Score = 133 bits (67), Expect = 6e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 396 gcgcagagtccgaaaagtatctcctgggtcccattctttgctgtctttgttgagaaagga 455 |||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||| Sbjct: 148 gcgcagagtccgaaaagtatcttctgggtcccattctttattatctttgttgagaaagga 207 Query: 456 tttaagagacggcagattgcagtcctttcttggtggatcatcctatgtatc 506 || ||| | ||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 208 cttgagaaatggcagtttgcagtcatttctcggtggatcatcctatgtatc 258 Score = 79.8 bits (40), Expect = 8e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 321 atgccccatctgtgctacgagggttggggtggacttgataggccacttgacaatgcagca 380 |||||||||||||||||| ||||| || ||||||||||||| || ||||| ||||| || Sbjct: 61 atgccccatctgtgctacaagggtcggaatggacttgataggacatttgactatgcaaca 120 Query: 381 tggaagttacttcaag 396 ||||||||| |||||| Sbjct: 121 tggaagttatttcaag 136
>gb|AC159817.2| Mus musculus BAC clone RP23-228E8 from chromosome 9, complete sequence Length = 193445 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 14 ggaaaggggaaaggagagagagagg 38 ||||||||||||||||||||||||| Sbjct: 145116 ggaaaggggaaaggagagagagagg 145140
>gb|AC120383.7| Mus musculus chromosome 12, clone RP24-273A7, complete sequence Length = 216796 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 16 aaaggggaaaggagagagagaggcgagg 43 ||||||||||||||||||||||| |||| Sbjct: 63452 aaaggggaaaggagagagagaggagagg 63425
>gb|AC112866.5| Rattus norvegicus 1 BAC CH230-375M13 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 147079 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 15 gaaaggggaaaggagagagagag 37 ||||||||||||||||||||||| Sbjct: 56063 gaaaggggaaaggagagagagag 56041
>gb|AC133907.9| Mus musculus chromosome 1, clone RP24-239K20, complete sequence Length = 150662 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 gaaaggggaaaggagagagagag 37 ||||||||||||||||||||||| Sbjct: 116990 gaaaggggaaaggagagagagag 117012
>gb|AC165347.4| Mus musculus BAC clone RP23-348B21 from chromosome 13, complete sequence Length = 205783 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 gaaaggggaaaggagagagagag 37 ||||||||||||||||||||||| Sbjct: 149798 gaaaggggaaaggagagagagag 149820
>gb|AC140778.15| Mus musculus chromosome 1, clone RP24-446J17, complete sequence Length = 160859 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 15 gaaaggggaaaggagagagagag 37 ||||||||||||||||||||||| Sbjct: 132902 gaaaggggaaaggagagagagag 132880
>gb|AC138156.3| Carollia perspicillata clone 41M6, complete sequence Length = 123894 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 15 gaaaggggaaaggagagagagag 37 ||||||||||||||||||||||| Sbjct: 79342 gaaaggggaaaggagagagagag 79320
>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold Length = 1501503 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 15 gaaaggggaaaggagagagagag 37 ||||||||||||||||||||||| Sbjct: 79342 gaaaggggaaaggagagagagag 79320
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 284 tcgacgacgagcacgccgtcga 305 |||||||||||||||||||||| Sbjct: 2435102 tcgacgacgagcacgccgtcga 2435123
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 284 tcgacgacgagcacgccgtcga 305 |||||||||||||||||||||| Sbjct: 1014475 tcgacgacgagcacgccgtcga 1014496
>emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete chromosome; segment 2/12 Length = 306650 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 178 gacgacgcggacgccggcgggg 199 |||||||||||||||||||||| Sbjct: 129733 gacgacgcggacgccggcgggg 129754
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 284 tcgacgacgagcacgccgtcga 305 |||||||||||||||||||||| Sbjct: 2331966 tcgacgacgagcacgccgtcga 2331987
>gb|AC129803.3| Homo sapiens 3 BAC RP11-15N24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 185721 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 418 cctgggtcccattctttgctgt 439 |||||||||||||||||||||| Sbjct: 132739 cctgggtcccattctttgctgt 132718
>gb|BC093085.1| Homo sapiens cDNA clone IMAGE:30530427 Length = 2560 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 418 cctgggtcccattctttgctgt 439 |||||||||||||||||||||| Sbjct: 69 cctgggtcccattctttgctgt 48
>dbj|AB091435.1| Burkholderia multivorans genes for probable lipoprotein transmembrane, 3-isopropylmalate dehydratase large and small subunits, 3-isopropylmalate dehydrogenase oxidoreductase, aspartate-semialdehyde dehydrogenase, probable transmembrane protein, tRNA pseudouridine synthase, N-(5'-phosphoribosyl) anthranilate isomerase, tryptophan synthase beta chain, probable DNA-methyltransferasee, tryptophan synthase alpha chain, acetyl-CoA carboxylase beta subunit, partial and complete cds Length = 12977 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 tcgacgacgagcacgccgtcga 305 |||||||||||||||||||||| Sbjct: 12225 tcgacgacgagcacgccgtcga 12204
>emb|AJ871581.1| Streptomyces achromogenes subsp. rubradiris complete rubradirin gene cluster, strain NRRL 3061 Length = 105657 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 176 tcgacgacgcggacgccggcgg 197 |||||||||||||||||||||| Sbjct: 6193 tcgacgacgcggacgccggcgg 6214
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 tcgacgacgagcacgccgtcga 305 |||||||||||||||||||||| Sbjct: 797596 tcgacgacgagcacgccgtcga 797575
>emb|CT033751.4| Mouse DNA sequence from clone RP24-236O3 on chromosome 17, complete sequence Length = 171391 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 gaaaggggaaaggagagagaga 36 |||||||||||||||||||||| Sbjct: 49505 gaaaggggaaaggagagagaga 49484
>gb|AC130547.5| Mus musculus BAC clone RP24-378G9 from 14, complete sequence Length = 163269 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 aaaggggaaaggagagagagag 37 |||||||||||||||||||||| Sbjct: 98583 aaaggggaaaggagagagagag 98604
>gb|AC025501.19| Mus musculus chromosome 10, clone RP23-129O23, complete sequence Length = 218156 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 aggggaaaggagagagagagg 38 ||||||||||||||||||||| Sbjct: 85154 aggggaaaggagagagagagg 85134
>ref|XM_470141.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2522 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 25 aggagagagagaggcgaggctagggtttc 53 ||||||||||||| |||||||||||||| Sbjct: 42 aggagagagagagaggaggctagggtttc 14
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 tcgacgacgagcacgccgtcg 304 ||||||||||||||||||||| Sbjct: 2401306 tcgacgacgagcacgccgtcg 2401286
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 tcgacgacgagcacgccgtcg 304 ||||||||||||||||||||| Sbjct: 1633087 tcgacgacgagcacgccgtcg 1633067
>gb|AC117802.9| Mus musculus chromosome 15, clone RP24-560I8, complete sequence Length = 165241 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 gaaaggggaaaggagagagag 35 ||||||||||||||||||||| Sbjct: 99198 gaaaggggaaaggagagagag 99178
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 tcgacgacgagcacgccgtcg 304 ||||||||||||||||||||| Sbjct: 2879801 tcgacgacgagcacgccgtcg 2879781
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 25 aggagagagagaggcgaggctagggtttc 53 ||||||||||||| |||||||||||||| Sbjct: 34142516 aggagagagagagaggaggctagggtttc 34142488
>gb|AC109247.14| Mus musculus chromosome 9, clone RP23-462C14, complete sequence Length = 225020 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 aaaggggaaaggagagagaga 36 ||||||||||||||||||||| Sbjct: 106064 aaaggggaaaggagagagaga 106084
>gb|AC102643.9| Mus musculus chromosome 8, clone RP23-304B22, complete sequence Length = 210037 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 aaggggaaaggagagagagag 37 ||||||||||||||||||||| Sbjct: 15303 aaggggaaaggagagagagag 15283
>gb|AC163628.5| Mus musculus BAC clone RP23-138F21 from chromosome 3, complete sequence Length = 194400 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 ggaaaggggaaaggagagagagagg 38 |||||||||| |||||||||||||| Sbjct: 139425 ggaaaggggagaggagagagagagg 139401
>gb|AC162519.4| Mus musculus chromosome 8, clone RP24-146M21, complete sequence Length = 150115 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 aaggggaaaggagagagagag 37 ||||||||||||||||||||| Sbjct: 49077 aaggggaaaggagagagagag 49097
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 tcgacgacgagcacgccgtcg 304 ||||||||||||||||||||| Sbjct: 2609962 tcgacgacgagcacgccgtcg 2609942
>gb|AC067751.7| Homo sapiens chromosome 10 clone RP11-357K14, complete sequence Length = 180882 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 ggaaaggggaaaggagagaga 34 ||||||||||||||||||||| Sbjct: 122936 ggaaaggggaaaggagagaga 122956
>gb|AC068207.6| Homo sapiens chromosome 8, clone RP11-26K8, complete sequence Length = 168843 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 gctgtctttgttgagaaagga 455 ||||||||||||||||||||| Sbjct: 91590 gctgtctttgttgagaaagga 91570
>gb|DQ073386.1| Heliocidaris erythrogramma goosecoid (Gsc) mRNA, complete cds Length = 3438 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 aaggggaaaggagagagagag 37 ||||||||||||||||||||| Sbjct: 2374 aaggggaaaggagagagagag 2354
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 25 aggagagagagaggcgaggctagggtttc 53 ||||||||||||| |||||||||||||| Sbjct: 34232988 aggagagagagagaggaggctagggtttc 34232960
>emb|AL603782.5| Mouse DNA sequence from clone RP23-480M4 on chromosome 8, complete sequence Length = 175157 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 aggggaaaggagagagagagg 38 ||||||||||||||||||||| Sbjct: 52979 aggggaaaggagagagagagg 52959
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 25 aggagagagagaggcgaggctagggtttc 53 ||||||||||||| |||||||||||||| Sbjct: 106328 aggagagagagagaggaggctagggtttc 106300
>gb|AC129569.17| Mus musculus chromosome 5, clone RP23-121M13, complete sequence Length = 199799 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 ggaaaggggaaaggagagaga 34 ||||||||||||||||||||| Sbjct: 145369 ggaaaggggaaaggagagaga 145349
>gb|AF245690.1|AF245690 Streptomyces verticillus putative N-acetyl-glucosamine transferase gene, partial cds; and putative N-acetyl-glucosamine 2-epimerase and hypothetical protein genes, complete cds Length = 5222 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 ggggttcgacgacgcggacgc 191 ||||||||||||||||||||| Sbjct: 2549 ggggttcgacgacgcggacgc 2529
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 gaggtggaggcgcgcggggcg 222 ||||||||||||||||||||| Sbjct: 4765305 gaggtggaggcgcgcggggcg 4765285
>dbj|AK102784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107K19, full insert sequence Length = 2370 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 25 aggagagagagaggcgaggctagggtttc 53 ||||||||||||| |||||||||||||| Sbjct: 75 aggagagagagagaggaggctagggtttc 47
>gb|AC154828.2| Mus musculus BAC clone RP24-549A19 from 13, complete sequence Length = 138426 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 aaggggaaaggagagagagag 37 ||||||||||||||||||||| Sbjct: 72172 aaggggaaaggagagagagag 72192
>dbj|AK069740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030D03, full insert sequence Length = 2282 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 25 aggagagagagaggcgaggctagggtttc 53 ||||||||||||| |||||||||||||| Sbjct: 77 aggagagagagagaggaggctagggtttc 49
>dbj|AP006304.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-53I21, complete sequence Length = 156583 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 gctgtctttgttgagaaagga 455 ||||||||||||||||||||| Sbjct: 22760 gctgtctttgttgagaaagga 22740
>gb|AC079682.29| Mus musculus strain C57BL/6J chromosome 3 clone rp23-463h24, complete sequence Length = 181082 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 ggaaaggggaaaggagagagagagg 38 |||||||||| |||||||||||||| Sbjct: 153266 ggaaaggggagaggagagagagagg 153290
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 tcgacgacgagcacgccgtcg 304 ||||||||||||||||||||| Sbjct: 2279117 tcgacgacgagcacgccgtcg 2279137
>gb|AC131122.4| Mus musculus BAC clone RP24-553B2 from 3, complete sequence Length = 183750 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 ggaaaggggaaaggagagagagagg 38 |||||||||| |||||||||||||| Sbjct: 28790 ggaaaggggagaggagagagagagg 28814
>gb|AC142415.4| Mus musculus BAC clone RP23-155F24 from 10, complete sequence Length = 209693 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 aggggaaaggagagagagagg 38 ||||||||||||||||||||| Sbjct: 98610 aggggaaaggagagagagagg 98630
>gb|AC159126.4| Mus musculus chromosome 8, clone RP23-182M11, complete sequence Length = 238838 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 aggggaaaggagagagagagg 38 ||||||||||||||||||||| Sbjct: 233678 aggggaaaggagagagagagg 233698
>emb|AL844553.4| Mouse DNA sequence from clone RP23-255J15 on chromosome 2, complete sequence Length = 82080 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 aaggggaaaggagagagagag 37 ||||||||||||||||||||| Sbjct: 26381 aaggggaaaggagagagagag 26401
>emb|AL731795.11| Mouse DNA sequence from clone RP23-123M13 on chromosome 2, complete sequence Length = 177282 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 ggaaaggggaaaggagagaga 34 ||||||||||||||||||||| Sbjct: 146337 ggaaaggggaaaggagagaga 146357
>dbj|AP000071.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region, section 7/19 Length = 100000 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 gctgtctttgttgagaaagga 455 ||||||||||||||||||||| Sbjct: 39003 gctgtctttgttgagaaagga 39023
>ref|NM_119602.1| Arabidopsis thaliana ubiquitin-protein ligase/ zinc ion binding AT4G34370 mRNA, complete cds Length = 2280 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 tttgctgtctttgttgagaaagga 455 |||||||| ||||||||||||||| Sbjct: 470 tttgctgtgtttgttgagaaagga 493
>ref|NM_111347.1| Arabidopsis thaliana unknown protein AT3G04750 mRNA, complete cds Length = 1986 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ttgcggcgaggatttcgatt 262 |||||||||||||||||||| Sbjct: 19 ttgcggcgaggatttcgatt 38
>gb|AY374476.1| Tetraodon nigroviridis class I helical cytokine receptor member 4 (CRFA4) mRNA, complete cds Length = 2476 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 cggacgccggcggggacgag 204 |||||||||||||||||||| Sbjct: 945 cggacgccggcggggacgag 964
>gb|AC115972.13| Mus musculus chromosome 5, clone RP24-79A6, complete sequence Length = 235928 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 aggggaaaggagagagagag 37 |||||||||||||||||||| Sbjct: 209713 aggggaaaggagagagagag 209694
>ref|XM_465933.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1074 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 tcgacgacgagcacgccgtc 303 |||||||||||||||||||| Sbjct: 731 tcgacgacgagcacgccgtc 712
>gb|AC102834.8| Mus musculus chromosome 5, clone RP24-299N23, complete sequence Length = 170365 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gaaaggggaaaggagagagagagg 38 |||||||| ||||||||||||||| Sbjct: 104408 gaaagggggaaggagagagagagg 104431
>gb|AC175200.2| Sporobolomyces roseus clone JGIBAIF-29B10, complete sequence Length = 40413 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 aaggggaaaggagagagaga 36 |||||||||||||||||||| Sbjct: 19686 aaggggaaaggagagagaga 19705
>gb|AC185523.2| Pan troglodytes chromosome X clone PTB-124O20 map human ortholog p11.3, complete sequence Length = 209530 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 ggaaaggggaaaggagagagagag 37 |||||||| ||||||||||||||| Sbjct: 131560 ggaaagggaaaaggagagagagag 131583
>gb|AC115843.10| Mus musculus chromosome 9, clone RP24-239P6, complete sequence Length = 215265 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 aggggaaaggagagagagag 37 |||||||||||||||||||| Sbjct: 49794 aggggaaaggagagagagag 49775
>gb|AC092482.71| Mus musculus strain C57BL/6J clone rp23-60j11, complete sequence Length = 220334 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 aaggggaaaggagagagaga 36 |||||||||||||||||||| Sbjct: 96648 aaggggaaaggagagagaga 96667
>gb|AC123678.19| Mus musculus chromosome 3, clone RP23-276A22, complete sequence Length = 198615 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 aaggggaaaggagagagaga 36 |||||||||||||||||||| Sbjct: 58132 aaggggaaaggagagagaga 58151
>gb|AC110164.26| Mus musculus chromosome 3, clone RP23-167C5, complete sequence Length = 199235 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gaaaggggaaaggagagagagagg 38 ||||| |||||||||||||||||| Sbjct: 26305 gaaagaggaaaggagagagagagg 26328
>gb|AC126426.3| Mus musculus BAC clone RP24-291G13 from chromosome 13, complete sequence Length = 201051 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 aggggaaaggagagagagag 37 |||||||||||||||||||| Sbjct: 108801 aggggaaaggagagagagag 108782
>emb|CT009536.7| Mouse DNA sequence from clone RP23-25A7 on chromosome 14, complete sequence Length = 239515 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 aggggaaaggagagagagag 37 |||||||||||||||||||| Sbjct: 148444 aggggaaaggagagagagag 148463
>gb|AC131758.3| Mus musculus BAC clone RP24-211E5 from chromosome 19, complete sequence Length = 206288 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ggggaaaggagagagagagg 38 |||||||||||||||||||| Sbjct: 25922 ggggaaaggagagagagagg 25941
>gb|AC122336.4| Mus musculus BAC clone RP23-351K21 from chromosome 7, complete sequence Length = 189296 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 aggggaaaggagagagagag 37 |||||||||||||||||||| Sbjct: 167119 aggggaaaggagagagagag 167138
>gb|AC011437.6|ATAC011437 Arabidopsis thaliana chromosome III BAC F7O18 genomic sequence, complete sequence Length = 95310 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ttgcggcgaggatttcgatt 262 |||||||||||||||||||| Sbjct: 81711 ttgcggcgaggatttcgatt 81692
>gb|AC125399.3| Mus musculus BAC clone RP24-245C15 from chromosome 14, complete sequence Length = 195425 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gaaaggggaaaggagagaga 34 |||||||||||||||||||| Sbjct: 15503 gaaaggggaaaggagagaga 15522
>gb|AC124419.4| Mus musculus BAC clone RP24-319P11 from chromosome 18, complete sequence Length = 140103 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 aggggaaaggagagagagag 37 |||||||||||||||||||| Sbjct: 117279 aggggaaaggagagagagag 117260
>gb|AC124359.3| Mus musculus BAC clone RP24-495G2 from chromosome 1, complete sequence Length = 174750 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ggggaaaggagagagagagg 38 |||||||||||||||||||| Sbjct: 81220 ggggaaaggagagagagagg 81201
>gb|AC127290.3| Mus musculus BAC clone RP23-364F13 from chromosome 5, complete sequence Length = 187121 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gaaaggggaaaggagagagagagg 38 |||||||| ||||||||||||||| Sbjct: 8626 gaaagggggaaggagagagagagg 8649
>gb|AC091173.10| Homo sapiens chromosome 8, clone RP11-280G9, complete sequence Length = 142265 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 aggcgcgcggggcggaggcc 228 |||||||||||||||||||| Sbjct: 69905 aggcgcgcggggcggaggcc 69924
>gb|AC126277.3| Mus musculus BAC clone RP23-161L22 from 12, complete sequence Length = 191231 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 aggggaaaggagagagagag 37 |||||||||||||||||||| Sbjct: 129039 aggggaaaggagagagagag 129020
>gb|AC124178.3| Mus musculus BAC clone RP23-193J15 from 18, complete sequence Length = 206833 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 ggaaaggggaaaggagagag 33 |||||||||||||||||||| Sbjct: 142675 ggaaaggggaaaggagagag 142694
>gb|AC116578.3| Mus musculus BAC clone RP23-264P8 from 9, complete sequence Length = 151722 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 aggggaaaggagagagagag 37 |||||||||||||||||||| Sbjct: 132133 aggggaaaggagagagagag 132114
>gb|AC084391.1| Mus musculus BAC clone RP23-294I17 from 1, complete sequence Length = 166182 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 agattgcagtcctttcttgg 488 |||||||||||||||||||| Sbjct: 31417 agattgcagtcctttcttgg 31436
>gb|AC113481.12| Mus musculus chromosome 12, clone RP23-310G22, complete sequence Length = 199650 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 aggggaaaggagagagagag 37 |||||||||||||||||||| Sbjct: 84146 aggggaaaggagagagagag 84165
>gb|AC119813.16| Mus musculus chromosome 14, clone RP23-298L20, complete sequence Length = 169207 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gaaaggggaaaggagagaga 34 |||||||||||||||||||| Sbjct: 162658 gaaaggggaaaggagagaga 162677
>gb|AC156398.13| Mus musculus 6 BAC RP24-279F16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 170925 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 ggaaaggggaaaggagagagagag 37 ||||||||||| |||||||||||| Sbjct: 38399 ggaaaggggaagggagagagagag 38376
>emb|AL592151.13| Human DNA sequence from clone RP11-351N5 on chromosome 1 Contains a novel gene, the 5' end of the AKT3 gene for v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma) and a CpG island, complete sequence Length = 148345 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 aggggaaaggagagagagag 37 |||||||||||||||||||| Sbjct: 50397 aggggaaaggagagagagag 50378
>emb|AL591491.5| Human DNA sequence from clone RP11-435K1 on chromosome Xp15.3-15.5 Contains the 5' end of a novel gene (FLJ14103 FLJ37558) and the 5' end of a novel gene, complete sequence Length = 121720 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 ggaaaggggaaaggagagagagag 37 |||||||| ||||||||||||||| Sbjct: 100656 ggaaagggaaaaggagagagagag 100679
>emb|AL590725.5| Human DNA sequence from clone RP11-107L15 on chromosome 6 Contains the gene for G protein-coupled receptor slt (melanin-concentrating hormone 2) (SLT), the 3' end of a novel gene and a CpG island, complete sequence Length = 180708 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ggaaaggggaaaggagagag 33 |||||||||||||||||||| Sbjct: 18339 ggaaaggggaaaggagagag 18320
>emb|AL133260.12| Human DNA sequence from clone RP1-292B18 on chromosome 6q24.3-25.3 Contains a 60S ribosomal protein L32 (RPL32) pseudogene, the 3' end of the gene for a novel protein similar to C1-tetrahydrofolate synthases (contains DKFZP586G1517 protein and FLJ21145, contains a tetrahydrofolate dehydrogenase/cyclohydrolase domain), part of a novel gene and a novel gene, complete sequence Length = 109310 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 aggggaaaggagagagagag 37 |||||||||||||||||||| Sbjct: 47393 aggggaaaggagagagagag 47412
>gb|AC158756.4| Mus musculus chromosome 5, clone RP24-151L11, complete sequence Length = 147858 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 aggggaaaggagagagagag 37 |||||||||||||||||||| Sbjct: 116267 aggggaaaggagagagagag 116286
>emb|AL021997.1|HS874C20 Human DNA sequence from clone RP5-874C20 on chromosome 6p22.1-22.3 Contains the 5' end of a novel protein similar to zinc finger protein 306 (ZNF306, ZFP47), the gene for a novel C2H2 type zinc finger protein, a novel gene, a zinc finger protein SRE-ZBP pseudogene and a CpG island, complete sequence Length = 97847 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 tggacttgataggccacttgacaa 373 |||| ||||||||||||||||||| Sbjct: 8175 tggatttgataggccacttgacaa 8198
>gb|AY117264.1| Arabidopsis thaliana unknown protein (At4g34370) mRNA, complete cds Length = 1825 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 tttgctgtctttgttgagaaagga 455 |||||||| ||||||||||||||| Sbjct: 256 tttgctgtgtttgttgagaaagga 279
>gb|AY050864.1| Arabidopsis thaliana unknown protein (At4g34370) mRNA, complete cds Length = 2296 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 tttgctgtctttgttgagaaagga 455 |||||||| ||||||||||||||| Sbjct: 470 tttgctgtgtttgttgagaaagga 493
>emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 81 Length = 195921 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 tttgctgtctttgttgagaaagga 455 |||||||| ||||||||||||||| Sbjct: 80906 tttgctgtgtttgttgagaaagga 80929
>emb|AL035521.1|ATF10M10 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M10 (ESSA project) Length = 114367 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 tttgctgtctttgttgagaaagga 455 |||||||| ||||||||||||||| Sbjct: 72387 tttgctgtgtttgttgagaaagga 72410
>emb|AJ851422.1| Gallus gallus mRNA for hypothetical protein, clone 2g14 Length = 5951 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ccaatcccgccatggattcc 78 |||||||||||||||||||| Sbjct: 4922 ccaatcccgccatggattcc 4903
>gb|AC091694.9| Mus musculus Strain C57BL6/J chromosome 11 BAC, RP23-316F3, Complete Sequence, complete sequence Length = 213119 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 aggggaaaggagagagagag 37 |||||||||||||||||||| Sbjct: 71048 aggggaaaggagagagagag 71067
>emb|CR628311.1| Human DNA sequence from clone XX-NCIH2171_5AD01, complete sequence Length = 114317 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 aggcgcgcggggcggaggcc 228 |||||||||||||||||||| Sbjct: 102903 aggcgcgcggggcggaggcc 102922
>emb|CR626894.1| Human DNA sequence from clone XX-NCIH2171_3M21, complete sequence Length = 126392 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aggcgcgcggggcggaggcc 228 |||||||||||||||||||| Sbjct: 110219 aggcgcgcggggcggaggcc 110200
>dbj|AK123280.1| Homo sapiens cDNA FLJ41286 fis, clone BRAMY2038475 Length = 2313 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 tggacttgataggccacttgacaa 373 |||| ||||||||||||||||||| Sbjct: 370 tggatttgataggccacttgacaa 393
>gb|AC164576.4| Mus musculus 10 BAC RP23-50F14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205209 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ggggaaaggagagagagagg 38 |||||||||||||||||||| Sbjct: 6750 ggggaaaggagagagagagg 6731
>gb|AC067881.5| Homo sapiens chromosome 8, clone RP11-687K23, complete sequence Length = 186676 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aggcgcgcggggcggaggcc 228 |||||||||||||||||||| Sbjct: 151994 aggcgcgcggggcggaggcc 151975
>dbj|AK036494.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830118L20 product:unclassifiable, full insert sequence Length = 3083 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 ggaaaggggaaaggagagagagag 37 ||||||||||| |||||||||||| Sbjct: 1009 ggaaaggggaagggagagagagag 986
>dbj|AK016941.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933427B05 product:synuclein, alpha interacting protein (synphilin), full insert sequence Length = 1425 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 ggaaaggggaaaggagagag 33 |||||||||||||||||||| Sbjct: 1371 ggaaaggggaaaggagagag 1390
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 cggcggggacgaggtggagg 211 |||||||||||||||||||| Sbjct: 491600 cggcggggacgaggtggagg 491619
>gb|AC157214.2| Mus musculus BAC clone RP23-35J2 from chromosome 19, complete sequence Length = 207625 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ggggaaaggagagagagagg 38 |||||||||||||||||||| Sbjct: 29363 ggggaaaggagagagagagg 29344
>dbj|AK084742.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330037H13 product:unclassifiable, full insert sequence Length = 1813 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gaaaggggaaaggagagagagagg 38 ||||| |||||||||||||||||| Sbjct: 231 gaaagaggaaaggagagagagagg 254
>gb|AC153485.9| Mus musculus 10 BAC RP23-319B13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 213412 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ggggaaaggagagagagagg 38 |||||||||||||||||||| Sbjct: 101280 ggggaaaggagagagagagg 101261
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 gcggggacgaggtggaggcg 213 |||||||||||||||||||| Sbjct: 18961441 gcggggacgaggtggaggcg 18961460 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ggggaaaggagagagagagg 38 |||||||||||||||||||| Sbjct: 13412205 ggggaaaggagagagagagg 13412186 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ggggaaaggagagagagagg 38 |||||||||||||||||||| Sbjct: 13403269 ggggaaaggagagagagagg 13403250 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ggggaaaggagagagagagg 38 |||||||||||||||||||| Sbjct: 13361482 ggggaaaggagagagagagg 13361501
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 aggggaaaggagagagagag 37 |||||||||||||||||||| Sbjct: 16677874 aggggaaaggagagagagag 16677893
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aactgccccttttgcggcga 251 |||||||||||||||||||| Sbjct: 14882498 aactgccccttttgcggcga 14882517 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 aggggaaaggagagagagag 37 |||||||||||||||||||| Sbjct: 4240223 aggggaaaggagagagagag 4240204 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ggggaaaggagagagagagg 38 |||||||||||||||||||| Sbjct: 2612775 ggggaaaggagagagagagg 2612756
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 gggaaaggagagagagaggc 39 |||||||||||||||||||| Sbjct: 29635416 gggaaaggagagagagaggc 29635435 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 tcgacgacgagcacgccgtc 303 |||||||||||||||||||| Sbjct: 18386042 tcgacgacgagcacgccgtc 18386023
>emb|BX825075.1|CNS0A5SW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH93ZH05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1716 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 ggagagagagaggcgaggct 45 |||||||||||||||||||| Sbjct: 550 ggagagagagaggcgaggct 569
>gb|AC097473.3| Homo sapiens BAC clone RP11-75N20 from 4, complete sequence Length = 150573 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 aggtggaggcgcgcggggcg 222 |||||||||||||||||||| Sbjct: 26269 aggtggaggcgcgcggggcg 26288
>gb|AC156024.2| Mus musculus BAC clone RP23-89J1 from chromosome 16, complete sequence Length = 240451 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 ggaaaggggaaaggagagagagag 37 ||||||||||| |||||||||||| Sbjct: 107691 ggaaaggggaagggagagagagag 107714
>gb|AC005678.1|AC005678 Homo sapiens PAC clone RP11-569I24 from 7, complete sequence Length = 187543 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 tggacttgataggccacttgacaa 373 |||| ||||||||||||||||||| Sbjct: 19603 tggatttgataggccacttgacaa 19580
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 gaggcgcgcggggcggaggc 227 |||||||||||||||||||| Sbjct: 3607177 gaggcgcgcggggcggaggc 3607158 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 184 gcggacgccggcggggacgaggtggagg 211 |||| |||||||| |||||||||||||| Sbjct: 3053483 gcggtcgccggcgtggacgaggtggagg 3053456 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 ggtggaggcgcgcggggcggaggc 227 |||||||||||||| ||||||||| Sbjct: 152312 ggtggaggcgcgcgcggcggaggc 152335
>gb|AC167467.1| Mus musculus BAC clone RP23-158E17 from chromosome 9, complete sequence Length = 212426 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 aggggaaaggagagagagag 37 |||||||||||||||||||| Sbjct: 199041 aggggaaaggagagagagag 199022
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 aggggaaaggagagagagag 37 |||||||||||||||||||| Sbjct: 85444 aggggaaaggagagagagag 85425
>dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1191_G08 Length = 172832 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 gggaaaggagagagagaggc 39 |||||||||||||||||||| Sbjct: 4395 gggaaaggagagagagaggc 4414
>ref|NM_001012915.1| Gallus gallus ankyrin repeat domain 28-like (LOC424055), mRNA Length = 5951 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ccaatcccgccatggattcc 78 |||||||||||||||||||| Sbjct: 4922 ccaatcccgccatggattcc 4903
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ggggaaaggagagagagagg 38 |||||||||||||||||||| Sbjct: 68116 ggggaaaggagagagagagg 68097
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529C07 Length = 174011 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ggggaaaggagagagagagg 38 |||||||||||||||||||| Sbjct: 24522 ggggaaaggagagagagagg 24503
>dbj|AP005928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0031F23 Length = 128090 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aactgccccttttgcggcga 251 |||||||||||||||||||| Sbjct: 97771 aactgccccttttgcggcga 97790
>dbj|AP004165.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1479_B12 Length = 127089 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 gggaaaggagagagagaggc 39 |||||||||||||||||||| Sbjct: 93137 gggaaaggagagagagaggc 93156
>gb|AC153612.6| Mus musculus 6 BAC RP23-435I4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197401 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 ggaaaggggaaaggagagagagag 37 ||||||||||| |||||||||||| Sbjct: 155185 ggaaaggggaagggagagagagag 155162
>dbj|AP003808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1115_C05 Length = 146585 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 aggggaaaggagagagagag 37 |||||||||||||||||||| Sbjct: 17786 aggggaaaggagagagagag 17805
>dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0001A11 Length = 153252 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 tcgacgacgagcacgccgtc 303 |||||||||||||||||||| Sbjct: 48966 tcgacgacgagcacgccgtc 48947
>emb|AL805978.10| Mouse DNA sequence from clone RP23-344I3 on chromosome X, complete sequence Length = 190744 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 aggggaaaggagagagagag 37 |||||||||||||||||||| Sbjct: 167359 aggggaaaggagagagagag 167340
>emb|AL356364.18| Human DNA sequence from clone RP11-328I22 on chromosome 1 Contains a novel gene (LOC388739) and a CpG island, complete sequence Length = 102634 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 ggaaaggggaaaggagagagagag 37 |||||||| ||||||||||||||| Sbjct: 47841 ggaaagggaaaaggagagagagag 47818
>gb|AY103623.1| Zea mays PCO141453 mRNA sequence Length = 1198 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ggaaaggagagagagaggcg 40 |||||||||||||||||||| Sbjct: 48 ggaaaggagagagagaggcg 67
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 gcggggacgaggtggaggcg 213 |||||||||||||||||||| Sbjct: 18887668 gcggggacgaggtggaggcg 18887687 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ggggaaaggagagagagagg 38 |||||||||||||||||||| Sbjct: 13366479 ggggaaaggagagagagagg 13366460 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ggggaaaggagagagagagg 38 |||||||||||||||||||| Sbjct: 13357543 ggggaaaggagagagagagg 13357524 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ggggaaaggagagagagagg 38 |||||||||||||||||||| Sbjct: 13315756 ggggaaaggagagagagagg 13315775
>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153064 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gcggggacgaggtggaggcg 213 |||||||||||||||||||| Sbjct: 8938 gcggggacgaggtggaggcg 8919
>emb|AL831802.5|CNS08CAF Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0083D13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104259 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ggggaaaggagagagagagg 38 |||||||||||||||||||| Sbjct: 71498 ggggaaaggagagagagagg 71479 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ggggaaaggagagagagagg 38 |||||||||||||||||||| Sbjct: 29711 ggggaaaggagagagagagg 29730 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ggggaaaggagagagagagg 38 |||||||||||||||||||| Sbjct: 20775 ggggaaaggagagagagagg 20794
>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151203 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 gcggggacgaggtggaggcg 213 |||||||||||||||||||| Sbjct: 57558 gcggggacgaggtggaggcg 57577
>emb|AJ510204.1|ATH510204 Arabidopsis thaliana ari1 gene for ARIADNE-like protein ARI1, exons 1-6 Length = 2491 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 tttgctgtctttgttgagaaagga 455 |||||||| ||||||||||||||| Sbjct: 663 tttgctgtgtttgttgagaaagga 686
>gb|AC133169.3| Mus musculus BAC clone RP24-259I15 from 9, complete sequence Length = 163930 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 aggggaaaggagagagagag 37 |||||||||||||||||||| Sbjct: 1878 aggggaaaggagagagagag 1859
>gb|AC132103.3| Mus musculus BAC clone RP24-363K20 from 9, complete sequence Length = 192053 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gaaaggggaaaggagagagagagg 38 ||||||||||||||| |||||||| Sbjct: 145704 gaaaggggaaaggagggagagagg 145681
>gb|AC141469.4| Mus musculus BAC clone RP24-439P5 from 5, complete sequence Length = 183468 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 aaaggagagagagaggcgaggcta 46 ||||||||||||||||| |||||| Sbjct: 85268 aaaggagagagagaggctaggcta 85245
>gb|AC149593.5| Mus musculus BAC clone RP23-34O23 from 7, complete sequence Length = 231000 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 aggggaaaggagagagagag 37 |||||||||||||||||||| Sbjct: 97290 aggggaaaggagagagagag 97309
>gb|AC124126.14| Mus musculus chromosome 18, clone RP23-377C8, complete sequence Length = 192355 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ggaaaggggaaaggagagag 33 |||||||||||||||||||| Sbjct: 176295 ggaaaggggaaaggagagag 176276
>emb|AL645542.13| Mouse DNA sequence from clone RP23-468A19 on chromosome 11, complete sequence Length = 166100 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 aggggaaaggagagagagag 37 |||||||||||||||||||| Sbjct: 158705 aggggaaaggagagagagag 158686
>gb|L00026.1|YSCACT Yeast (S.cerevisiae) actin gene, complete cds Length = 2509 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 aaaggagagagagaggcgag 42 |||||||||||||||||||| Sbjct: 413 aaaggagagagagaggcgag 394
>dbj|D50617.1|YSCCHRVIN Saccharomyces cerevisiae chromosome VI complete DNA sequence Length = 270148 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 aaaggagagagagaggcgag 42 |||||||||||||||||||| Sbjct: 54955 aaaggagagagagaggcgag 54974 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,620,032 Number of Sequences: 3902068 Number of extensions: 7620032 Number of successful extensions: 100307 Number of sequences better than 10.0: 147 Number of HSP's better than 10.0 without gapping: 151 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98233 Number of HSP's gapped (non-prelim): 2064 length of query: 508 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 486 effective length of database: 17,147,199,772 effective search space: 8333539089192 effective search space used: 8333539089192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
