>MMP25_HUMAN (Q9NPA2) Matrix metalloproteinase-25 precursor (EC 3.4.24.-)|
           (MMP-25) (Membrane-type matrix metalloproteinase 6)
           (MT-MMP 6) (Membrane-type-6 matrix metalloproteinase)
           (MT6-MMP) (Leukolysin)
          Length = 562

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -1

Query: 117 WRLQPSRSRHQPRASSRPSPWEGRPTAPRL 28
           WRLQPS     PR +     WEG P   R+
Sbjct: 340 WRLQPSGQLVSPRPARLHRFWEGLPAQVRV 369

>TIG1_HUMAN (P49788) Retinoic acid receptor responder protein 1|
          (Tazarotene-induced gene 1 protein) (RAR-responsive
          protein TIG1)
          Length = 294

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 4/24 (16%)
 Frame = -1

Query: 87 QPRASSRPSPWEG----RPTAPRL 28
          QPR    P+PW G    RPTAP L
Sbjct: 2  QPRRQRLPAPWSGPRGPRPTAPLL 25

>H1E_CHITE (P40278) Histone H1E|
          Length = 237

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +3

Query: 258 PKKTAKPVKQEXXXXXXXXXXXXEEIAKKPSAKPATLAAS 377
           PK  AKP K+              + AKKP+AKPA   A+
Sbjct: 194 PKAAAKPKKEVKPKKEAKPKKAAAKPAKKPAAKPAKKPAA 233


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,930,838
Number of Sequences: 219361
Number of extensions: 208267
Number of successful extensions: 690
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)