ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart07e11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_480492.1| Oryza sativa (japonica cultivar-group), mRNA 135 1e-28
2gb|AY644645.1| Oryza sativa (indica cultivar-group) putative nuc... 135 1e-28
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
4dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
5dbj|AK103422.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 1e-28
6gb|BT018730.1| Zea mays clone EL01N0519D03.d mRNA sequence 96 1e-16
7ref|XM_473923.1| Oryza sativa (japonica cultivar-group), predic... 60 5e-06
8emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4,... 60 5e-06
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 60 5e-06
10dbj|AK103446.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 5e-06
11gb|BT024069.1| Zea mays clone EL01N0450D06 mRNA sequence 60 5e-06
12gb|AY111884.1| Zea mays CL19566_1 mRNA sequence 54 3e-04
13gb|L41841.1|CREHIH3G Chlamydomonas reinhardtii histone H3, histo... 48 0.021
14gb|U16726.1|CRU16726 Chlamydomonas reinhardtii histone H1 (ch1),... 48 0.021
15ref|XM_958769.1| Neurospora crassa OR74A hypothetical protein (N... 46 0.082
16ref|XM_330527.1| Neurospora crassa OR74A hypothetical protein (N... 46 0.082
17gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 46 0.082
18gb|AF008943.1|AF008943 Crithidia fasciculata kinetoplast-associa... 46 0.082
19gb|BC025078.1| Mus musculus zinc finger, CCHC domain containing ... 44 0.33
20gb|AC092229.2| Drosophila melanogaster clone BACR23I04, complete... 44 0.33
21ref|XM_849267.1| PREDICTED: Canis familiaris similar to AF4/FMR2... 44 0.33
22ref|NM_057252.3| Drosophila melanogaster escargot CG3758-RA (esg... 44 0.33
23ref|NM_026479.2| Mus musculus zinc finger, CCHC domain containin... 44 0.33
24gb|AY071590.1| Drosophila melanogaster RE64266 full length cDNA 44 0.33
25dbj|AK169856.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 44 0.33
26dbj|AK010803.1| Mus musculus ES cells cDNA, RIKEN full-length en... 44 0.33
27dbj|AK020177.1| Mus musculus 12 days embryo male wolffian duct i... 44 0.33
28gb|AC092247.1|AC092247 Drosophila melanogaster, chromosome 2L, r... 44 0.33
29dbj|AK027985.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 44 0.33
30dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 44 0.33
31ref|NM_214555.1| Strongylocentrotus purpuratus late histone H1-g... 44 0.33
32gb|AC011013.17|AC011013 Mus musculus chromosome 11, clone RP23-2... 44 0.33
33gb|BC087902.1| Mus musculus zinc finger, CCHC domain containing ... 44 0.33
34gb|BT023984.1| Zea mays clone EL01N0314H01 mRNA sequence 44 0.33
35gb|AE003647.3| Drosophila melanogaster chromosome 2L, section 56... 44 0.33
36gb|M16033.1|SUSHISHA1G Sea urchin (S.purpuratus) late histone H1... 44 0.33
37emb|AL592489.13| Mouse DNA sequence from clone RP23-226J16 on ch... 44 0.33
38ref|XM_360329.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.3
39gb|AC113269.13| Mus musculus chromosome 15, clone RP23-372F2, co... 42 1.3
40gb|AF107024.1|AF107024 Triticum aestivum histone H1 WH1B.1 mRNA,... 42 1.3
41gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
42ref|XM_957859.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.1
43ref|XM_328536.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.1
44gb|AC122408.4| Mus musculus BAC clone RP24-137E16 from chromosom... 40 5.1
45ref|XR_002639.1| PREDICTED: Mus musculus similar to DEAD (Asp-Gl... 40 5.1
46gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.1
47ref|XM_549104.2| PREDICTED: Canis familiaris similar to bromo do... 40 5.1
48ref|XR_003676.1| PREDICTED: Mus musculus similar to DEAD (Asp-Gl... 40 5.1
49gb|AC132384.2| Mus musculus BAC clone RP23-438F16 from chromosom... 40 5.1
50ref|XM_854087.1| PREDICTED: Canis familiaris hypothetical protei... 40 5.1
51gb|AC123044.4| Mus musculus BAC clone RP24-548B7 from chromosome... 40 5.1
52gb|AC151904.6| Mus musculus BAC clone RP23-233K6 from chromosome... 40 5.1
53emb|AJ973181.1| Sphaerechinus granularis mRNA for translation el... 40 5.1
54ref|XM_504483.1| Yarrowia lipolytica CLIB122, YALI0E27808g predi... 40 5.1
55emb|AL117341.26|HSBA512N4 Human DNA sequence from clone RP11-512... 40 5.1
56emb|Y14236.1|SGY14236 Sphaerichinus granularis mRNA for elongati... 40 5.1
57emb|Y14235.1|SGY14235 Sphaerichinus granularis mRNA for elongati... 40 5.1
58emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.1
59emb|BX640434.1| Bordetella parapertussis strain 12822, complete ... 40 5.1
60emb|BX640421.1| Bordetella pertussis strain Tohama I, complete g... 40 5.1
61gb|AC163439.3| Mus musculus chromosome 8, clone RP23-390F12, com... 40 5.1
62emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC... 40 5.1
63gb|DQ118640.1| Pavlova lutheri isolate 481 chloroplast ATP sytha... 40 5.1
64gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 5.1
65dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
66dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
67gb|AC112788.4| Homo sapiens BAC clone RP11-1221I12 from 2, compl... 40 5.1
68gb|AC151901.3| Mus musculus BAC clone RP23-271E15 from chromosom... 40 5.1
69gb|AC152453.4| Mus musculus BAC clone RP24-238B3 from chromosome... 40 5.1
70dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.1
71ref|XM_342141.2| PREDICTED: Rattus norvegicus DEAD (Asp-Glu-Ala-... 40 5.1
72dbj|AP004794.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
73emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 5.1
74dbj|AK060680.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
75gb|AF107025.1|AF107025 Triticum aestivum similar to histone H1 m... 40 5.1
76gb|BC105878.1| Rattus norvegicus DEAD (Asp-Glu-Ala-Asp) box poly... 40 5.1
77gb|AC113075.9| Mus musculus chromosome 19, clone RP23-278F24, co... 40 5.1
78gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.1
79ref|NM_001037201.1| Rattus norvegicus DEAD (Asp-Glu-Ala-Asp) box... 40 5.1
80emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 5.1
81gb|U16725.1|CRU16725 Chlamydomonas reinhardtii histone H3 (ch3-I... 40 5.1
82gb|U16724.1|CRU16724 Chlamydomonas reinhardtii histone H3 (ch3-I... 40 5.1
83gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome 40 5.1
84emb|AL590619.9| Mouse DNA sequence from clone RP23-357B4 on chro... 40 5.1
85gb|M83207.1|DROESCARGO Drosophila melanogaster developmental esc... 40 5.1
86dbj|D87065.1| Triticum aestivum gene for histone H1, complete cd... 40 5.1
87dbj|D87064.1| Triticum aestivum gene for histone H1, complete cd... 40 5.1
88emb|AL590462.1|CNS07EGJ DNA centromeric region sequence BAC 34F0... 40 5.1 
>ref|XM_480492.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2090

 Score =  135 bits (68), Expect = 1e-28
 Identities = 135/159 (84%), Gaps = 9/159 (5%)
 Strand = Plus / Plus

                                                                       
Query: 55  ccaaggggaaggccgggaagaagcgcgaggctgatgacgagatcgagaaggctgtaagcg 114
           |||||||||||| ||| |||||||| ||||| || ||||||||||||||||| || ||||
Sbjct: 163 ccaaggggaagggcggcaagaagcgggaggcggaggacgagatcgagaaggcggtgagcg 222

                                                                       
Query: 115 ccaagaagcagaaggctg---------cgccggcnaaggcggtgaccgcgcccaaagagg 165
           |||||||||||||||| |         ||||||| ||||| ||  |||||||||| | ||
Sbjct: 223 ccaagaagcagaaggccgcggcggcgccgccggccaaggccgtccccgcgcccaaggcgg 282

                                                  
Query: 166 ccgccaagaaggccaagaagcagccgccgcccaagaagg 204
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 283 acgccaagaaggccaagaagcagccgccgcccaagaagg 321



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 211 gcagcagctctgaggaggagtcatccgagtccgaggaggagg 252
           ||||||||||||||||||| || || ||||||||||||||||
Sbjct: 340 gcagcagctctgaggaggactcgtcggagtccgaggaggagg 381
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>gb|AY644645.1| Oryza sativa (indica cultivar-group) putative nucleolin (NUC) mRNA,
           complete cds
          Length = 2039

 Score =  135 bits (68), Expect = 1e-28
 Identities = 135/159 (84%), Gaps = 9/159 (5%)
 Strand = Plus / Plus

                                                                       
Query: 55  ccaaggggaaggccgggaagaagcgcgaggctgatgacgagatcgagaaggctgtaagcg 114
           |||||||||||| ||| |||||||| ||||| || ||||||||||||||||| || ||||
Sbjct: 76  ccaaggggaagggcggcaagaagcgggaggcggaggacgagatcgagaaggcggtgagcg 135

                                                                       
Query: 115 ccaagaagcagaaggctg---------cgccggcnaaggcggtgaccgcgcccaaagagg 165
           |||||||||||||||| |         ||||||| ||||| ||  |||||||||| | ||
Sbjct: 136 ccaagaagcagaaggccgcggcggcgccgccggccaaggccgtccccgcgcccaaggcgg 195

                                                  
Query: 166 ccgccaagaaggccaagaagcagccgccgcccaagaagg 204
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 196 acgccaagaaggccaagaagcagccgccgcccaagaagg 234



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 211 gcagcagctctgaggaggagtcatccgagtccgaggaggagg 252
           ||||||||||||||||||| || || ||||||||||||||||
Sbjct: 253 gcagcagctctgaggaggactcgtcggagtccgaggaggagg 294
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  135 bits (68), Expect = 1e-28
 Identities = 135/159 (84%), Gaps = 9/159 (5%)
 Strand = Plus / Minus

                                                                           
Query: 55      ccaaggggaaggccgggaagaagcgcgaggctgatgacgagatcgagaaggctgtaagcg 114
               |||||||||||| ||| |||||||| ||||| || ||||||||||||||||| || ||||
Sbjct: 5420169 ccaaggggaagggcggcaagaagcgggaggcggaggacgagatcgagaaggcggtgagcg 5420110

                                                                           
Query: 115     ccaagaagcagaaggctg---------cgccggcnaaggcggtgaccgcgcccaaagagg 165
               |||||||||||||||| |         ||||||| ||||| ||  |||||||||| | ||
Sbjct: 5420109 ccaagaagcagaaggccgcggcggcgccgccggccaaggccgtccccgcgcccaaggcgg 5420050

                                                      
Query: 166     ccgccaagaaggccaagaagcagccgccgcccaagaagg 204
                ||||||||||||||||||||||||||||||||||||||
Sbjct: 5420049 acgccaagaaggccaagaagcagccgccgcccaagaagg 5420011



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                         
Query: 211     gcagcagctctgaggaggagtcatccgagtccgaggaggagg 252
               ||||||||||||||||||| || || ||||||||||||||||
Sbjct: 5419992 gcagcagctctgaggaggactcgtcggagtccgaggaggagg 5419951
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>dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0056O06
          Length = 151038

 Score =  135 bits (68), Expect = 1e-28
 Identities = 135/159 (84%), Gaps = 9/159 (5%)
 Strand = Plus / Minus

                                                                         
Query: 55    ccaaggggaaggccgggaagaagcgcgaggctgatgacgagatcgagaaggctgtaagcg 114
             |||||||||||| ||| |||||||| ||||| || ||||||||||||||||| || ||||
Sbjct: 89980 ccaaggggaagggcggcaagaagcgggaggcggaggacgagatcgagaaggcggtgagcg 89921

                                                                         
Query: 115   ccaagaagcagaaggctg---------cgccggcnaaggcggtgaccgcgcccaaagagg 165
             |||||||||||||||| |         ||||||| ||||| ||  |||||||||| | ||
Sbjct: 89920 ccaagaagcagaaggccgcggcggcgccgccggccaaggccgtccccgcgcccaaggcgg 89861

                                                    
Query: 166   ccgccaagaaggccaagaagcagccgccgcccaagaagg 204
              ||||||||||||||||||||||||||||||||||||||
Sbjct: 89860 acgccaagaaggccaagaagcagccgccgcccaagaagg 89822



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                       
Query: 211   gcagcagctctgaggaggagtcatccgagtccgaggaggagg 252
             ||||||||||||||||||| || || ||||||||||||||||
Sbjct: 89803 gcagcagctctgaggaggactcgtcggagtccgaggaggagg 89762
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>dbj|AK103422.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128K11, full
           insert sequence
          Length = 2089

 Score =  135 bits (68), Expect = 1e-28
 Identities = 135/159 (84%), Gaps = 9/159 (5%)
 Strand = Plus / Plus

                                                                       
Query: 55  ccaaggggaaggccgggaagaagcgcgaggctgatgacgagatcgagaaggctgtaagcg 114
           |||||||||||| ||| |||||||| ||||| || ||||||||||||||||| || ||||
Sbjct: 163 ccaaggggaagggcggcaagaagcgggaggcggaggacgagatcgagaaggcggtgagcg 222

                                                                       
Query: 115 ccaagaagcagaaggctg---------cgccggcnaaggcggtgaccgcgcccaaagagg 165
           |||||||||||||||| |         ||||||| ||||| ||  |||||||||| | ||
Sbjct: 223 ccaagaagcagaaggccgcggcggcgccgccggccaaggccgtccccgcgcccaaggcgg 282

                                                  
Query: 166 ccgccaagaaggccaagaagcagccgccgcccaagaagg 204
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 283 acgccaagaaggccaagaagcagccgccgcccaagaagg 321



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 211 gcagcagctctgaggaggagtcatccgagtccgaggaggagg 252
           ||||||||||||||||||| || || ||||||||||||||||
Sbjct: 340 gcagcagctctgaggaggactcgtcggagtccgaggaggagg 381
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>gb|BT018730.1| Zea mays clone EL01N0519D03.d mRNA sequence
          Length = 2316

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 127/153 (83%), Gaps = 3/153 (1%)
 Strand = Plus / Plus

                                                                       
Query: 69  gggaagaagcgcgaggctgatgacgagatcgagaaggctgtaagcgccaagaagcagaag 128
           |||||||| || ||||| || || |||||||||||||| || ||||| ||||||||||||
Sbjct: 132 gggaagaaacgggaggcggaggaagagatcgagaaggccgtgagcgcgaagaagcagaag 191

                                                                       
Query: 129 gctgcgcc---ggcnaaggcggtgaccgcgcccaaagaggccgccaagaaggccaagaag 185
           || |||||   ||| ||||| ||| |  || ||||  ||| |||||||||| ||||||||
Sbjct: 192 gcggcgccaccggcgaaggccgtgccgacgtccaagaaggacgccaagaagtccaagaag 251

                                            
Query: 186 cagccgccgcccaagaaggttgacagcagcagc 218
           ||||| || |||||||||| ||| |||||||||
Sbjct: 252 cagcctccccccaagaaggctgagagcagcagc 284



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 321 tctgacgaggaaattgcaaagaagccttctgctaaacc 358
           ||||| ||||||  ||||||||||||| ||||||||||
Sbjct: 411 tctgatgaggaacctgcaaagaagcctgctgctaaacc 448
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>ref|XM_473923.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2124

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 180 aagaagcagccgccgcccaagaaggttgacagcagcagctctgaggagga 229
           ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 187 aagaagcagcccccaccgaagaaggttgagagcagcagttctgaggagga 236
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>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23,
              complete sequence
          Length = 164805

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                
Query: 180    aagaagcagccgccgcccaagaaggttgacagcagcagctctgaggagga 229
              ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 157788 aagaagcagcccccaccgaagaaggttgagagcagcagttctgaggagga 157837
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                  
Query: 180      aagaagcagccgccgcccaagaaggttgacagcagcagctctgaggagga 229
                ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 31580105 aagaagcagcccccaccgaagaaggttgagagcagcagttctgaggagga 31580154
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>dbj|AK103446.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129G11, full
           insert sequence
          Length = 2447

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 180 aagaagcagccgccgcccaagaaggttgacagcagcagctctgaggagga 229
           ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 329 aagaagcagcccccaccgaagaaggttgagagcagcagttctgaggagga 378
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>gb|BT024069.1| Zea mays clone EL01N0450D06 mRNA sequence
          Length = 2497

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 180 aagaagcagccgccgcccaagaaggttgacagcagcagctctgaggagga 229
           ||||||||||| || || ||||| ||||| ||||||||||||||||||||
Sbjct: 285 aagaagcagccccctccaaagaaagttgagagcagcagctctgaggagga 334
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>gb|AY111884.1| Zea mays CL19566_1 mRNA sequence
          Length = 931

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 79/96 (82%), Gaps = 3/96 (3%)
 Strand = Plus / Minus

                                                                       
Query: 98  cgagaaggctgtaagcgccaagaagcagaaggctgcgcc---ggcnaaggcggtgaccgc 154
           ||||||||| || ||||| |||||||||||||| |||||   ||| ||||| ||| |  |
Sbjct: 789 cgagaaggccgtgagcgcgaagaagcagaaggcggcgccaccggcgaaggccgtgccgac 730

                                               
Query: 155 gcccaaagaggccgccaagaaggccaagaagcagcc 190
           | ||||  ||| |||||||||| |||||||||||||
Sbjct: 729 gtccaagaaggacgccaagaagtccaagaagcagcc 694



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 321 tctgacgaggaaattgcaaagaagccttctgctaaacc 358
           ||||| ||||||  ||||||||||||| ||||||||||
Sbjct: 539 tctgatgaggaacctgcaaagaagcctgctgctaaacc 502
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>gb|L41841.1|CREHIH3G Chlamydomonas reinhardtii histone H3, histone H4, histone H2B, and
            histone H2A genes, complete cds
          Length = 4358

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 163  aggccgccaagaaggccaagaagcagcc 190
            ||||||||||||||||||||||| ||||
Sbjct: 3406 aggccgccaagaaggccaagaaggagcc 3379
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>gb|U16726.1|CRU16726 Chlamydomonas reinhardtii histone H1 (ch1), histone H2A (ch2a-IV),
            and histone H2B (ch2b-IV) genes, complete cds
          Length = 4502

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 163  aggccgccaagaaggccaagaagcagcc 190
            ||||||||||||||||||||||| ||||
Sbjct: 3845 aggccgccaagaaggccaagaaggagcc 3872
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>ref|XM_958769.1| Neurospora crassa OR74A hypothetical protein (NCU03092.1) partial
           mRNA
          Length = 1287

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 240 tccgaggaggaggaggttcccaagaag 266
           |||||||||||||||| ||||||||||
Sbjct: 481 tccgaggaggaggaggctcccaagaag 507
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>ref|XM_330527.1| Neurospora crassa OR74A hypothetical protein (NCU03092.1) partial
           mRNA
          Length = 1287

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 240 tccgaggaggaggaggttcccaagaag 266
           |||||||||||||||| ||||||||||
Sbjct: 481 tccgaggaggaggaggctcccaagaag 507
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 163     aggccgccaagaaggccaagaag 185
               |||||||||||||||||||||||
Sbjct: 2718391 aggccgccaagaaggccaagaag 2718369
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>gb|AF008943.1|AF008943 Crithidia fasciculata kinetoplast-associated protein p18-1 (KAP2-1)
           gene, complete cds
          Length = 764

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 163 aggccgccaagaaggccaagaag 185
           |||||||||||||||||||||||
Sbjct: 389 aggccgccaagaaggccaagaag 411
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>gb|BC025078.1| Mus musculus zinc finger, CCHC domain containing 10, mRNA (cDNA
           clone MGC:35654 IMAGE:4504126), complete cds
          Length = 1229

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 234 tccgagtccgaggaggaggagg 255
           ||||||||||||||||||||||
Sbjct: 477 tccgagtccgaggaggaggagg 456
to top
>gb|AC092229.2| Drosophila melanogaster clone BACR23I04, complete sequence
          Length = 202042

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 166 ccgccaagaaggccaagaagcagccgccgc 195
           |||||||||||| |||||| ||||||||||
Sbjct: 177 ccgccaagaaggacaagaaccagccgccgc 206
to top
>ref|XM_849267.1| PREDICTED: Canis familiaris similar to AF4/FMR2 family, member 3
            isoform 2 (LOC611584), mRNA
          Length = 3741

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 234  tccgagtccgaggaggaggagg 255
            ||||||||||||||||||||||
Sbjct: 2105 tccgagtccgaggaggaggagg 2084
to top
>ref|NM_057252.3| Drosophila melanogaster escargot CG3758-RA (esg), mRNA
          Length = 2287

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 166  ccgccaagaaggccaagaagcagccgccgc 195
            |||||||||||| |||||| ||||||||||
Sbjct: 1123 ccgccaagaaggacaagaaccagccgccgc 1152
to top
>ref|NM_026479.2| Mus musculus zinc finger, CCHC domain containing 10 (Zcchc10), mRNA
          Length = 1258

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 234 tccgagtccgaggaggaggagg 255
           ||||||||||||||||||||||
Sbjct: 462 tccgagtccgaggaggaggagg 441
to top
>gb|AY071590.1| Drosophila melanogaster RE64266 full length cDNA
          Length = 2285

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 166  ccgccaagaaggccaagaagcagccgccgc 195
            |||||||||||| |||||| ||||||||||
Sbjct: 1118 ccgccaagaaggacaagaaccagccgccgc 1147
to top
>dbj|AK169856.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630001B12
           product:2410141K03Rik protein (RIKEN cDNA 2410141K03
           gene) (Hypothetical retrovirus zinc finger-like domains
           structure containing protein), full insert sequence
          Length = 1197

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 234 tccgagtccgaggaggaggagg 255
           ||||||||||||||||||||||
Sbjct: 462 tccgagtccgaggaggaggagg 441
to top
>dbj|AK010803.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
           clone:2410141K03 product:hypothetical Retrovirus zinc
           finger-like domains structure containing protein, full
           insert sequence
          Length = 1290

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 234 tccgagtccgaggaggaggagg 255
           ||||||||||||||||||||||
Sbjct: 473 tccgagtccgaggaggaggagg 452
to top
>dbj|AK020177.1| Mus musculus 12 days embryo male wolffian duct includes surrounding
           region cDNA, RIKEN full-length enriched library,
           clone:6720490O22 product:hypothetical Retrovirus zinc
           finger-like domains structure containing protein, full
           insert sequence
          Length = 1258

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 234 tccgagtccgaggaggaggagg 255
           ||||||||||||||||||||||
Sbjct: 462 tccgagtccgaggaggaggagg 441
to top
>gb|AC092247.1|AC092247 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone
              BACR36B06, complete sequence
          Length = 183436

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 166    ccgccaagaaggccaagaagcagccgccgc 195
              |||||||||||| |||||| ||||||||||
Sbjct: 136784 ccgccaagaaggacaagaaccagccgccgc 136813
to top
>dbj|AK027985.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110061E09 product:hypothetical
           Retrovirus zinc finger-like domains structure containing
           protein, full insert sequence
          Length = 1252

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 234 tccgagtccgaggaggaggagg 255
           ||||||||||||||||||||||
Sbjct: 469 tccgagtccgaggaggaggagg 448
to top
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 163     aggccgccaagaaggccaagaa 184
               ||||||||||||||||||||||
Sbjct: 1041307 aggccgccaagaaggccaagaa 1041328
to top
>ref|NM_214555.1| Strongylocentrotus purpuratus late histone H1-gamma (LOC373350),
           mRNA
          Length = 654

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 165 gccgccaagaaggccaagaagc 186
           ||||||||||||||||||||||
Sbjct: 457 gccgccaagaaggccaagaagc 478
to top
>gb|AC011013.17|AC011013 Mus musculus chromosome 11, clone RP23-218N2, complete sequence
          Length = 201728

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 234   tccgagtccgaggaggaggagg 255
             ||||||||||||||||||||||
Sbjct: 50348 tccgagtccgaggaggaggagg 50327
to top
>gb|BC087902.1| Mus musculus zinc finger, CCHC domain containing 10, mRNA (cDNA
           clone MGC:107221 IMAGE:30505854), complete cds
          Length = 1256

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 234 tccgagtccgaggaggaggagg 255
           ||||||||||||||||||||||
Sbjct: 461 tccgagtccgaggaggaggagg 440
to top
>gb|BT023984.1| Zea mays clone EL01N0314H01 mRNA sequence
          Length = 2132

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 321  tctgacgaggaaattgcaaagaagccttctgctaaacc 358
            ||||| ||||||  ||||||||||||| ||||||||||
Sbjct: 1950 tctgatgaggaacctgcaaagaagcctgctgctaaacc 1913
to top
>gb|AE003647.3| Drosophila melanogaster chromosome 2L, section 56 of 83 of the complete
             sequence
          Length = 261949

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 166   ccgccaagaaggccaagaagcagccgccgc 195
             |||||||||||| |||||| ||||||||||
Sbjct: 69418 ccgccaagaaggacaagaaccagccgccgc 69447
to top
>gb|M16033.1|SUSHISHA1G Sea urchin (S.purpuratus) late histone H1-gamma gene, complete cds
          Length = 1182

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 165 gccgccaagaaggccaagaagc 186
           ||||||||||||||||||||||
Sbjct: 897 gccgccaagaaggccaagaagc 918
to top
>emb|AL592489.13| Mouse DNA sequence from clone RP23-226J16 on chromosome 11, complete
             sequence
          Length = 155262

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 234   tccgagtccgaggaggaggagg 255
             ||||||||||||||||||||||
Sbjct: 41759 tccgagtccgaggaggaggagg 41738
to top
>ref|XM_360329.1| Magnaporthe grisea 70-15 hypothetical protein (MG05703.4) partial
           mRNA
          Length = 2268

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 243 gaggaggaggaggttcccaagaaga 267
           ||||||||||||| |||||||||||
Sbjct: 670 gaggaggaggaggatcccaagaaga 694
to top
>gb|AC113269.13| Mus musculus chromosome 15, clone RP23-372F2, complete sequence
          Length = 202155

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 211    gcagcagctctgaggaggagt 231
              |||||||||||||||||||||
Sbjct: 148511 gcagcagctctgaggaggagt 148531
to top
>gb|AF107024.1|AF107024 Triticum aestivum histone H1 WH1B.1 mRNA, complete cds
          Length = 1114

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 165 gccgccaagaaggccaagaag 185
           |||||||||||||||||||||
Sbjct: 809 gccgccaagaaggccaagaag 829
to top
>gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0003A09, complete sequence
          Length = 167222

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   gccaagaagcagccgccgcc 196
             ||||||||||||||||||||
Sbjct: 98407 gccaagaagcagccgccgcc 98388
to top
>ref|XM_957859.1| Neurospora crassa OR74A hypothetical protein (NCU07831.1) partial
           mRNA
          Length = 2619

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 236 cgagtccgaggaggaggagg 255
           ||||||||||||||||||||
Sbjct: 222 cgagtccgaggaggaggagg 241
to top
>ref|XM_328536.1| Neurospora crassa OR74A hypothetical protein (NCU07831.1) partial
           mRNA
          Length = 2619

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 236 cgagtccgaggaggaggagg 255
           ||||||||||||||||||||
Sbjct: 222 cgagtccgaggaggaggagg 241
to top
>gb|AC122408.4| Mus musculus BAC clone RP24-137E16 from chromosome 10, complete sequence
          Length = 131580

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    ccaagaaggccaagaagcag 188
              ||||||||||||||||||||
Sbjct: 120715 ccaagaaggccaagaagcag 120734



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   ccaagaaggccaagaagcag 188
             ||||||||||||||||||||
Sbjct: 81955 ccaagaaggccaagaagcag 81936
to top
>ref|XR_002639.1| PREDICTED: Mus musculus similar to DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 21a (LOC669723), mRNA
          Length = 2224

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ccaagaaggccaagaagcag 188
           ||||||||||||||||||||
Sbjct: 273 ccaagaaggccaagaagcag 292
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 60       gggaaggccgggaagaagcg 79
                ||||||||||||||||||||
Sbjct: 10181827 gggaaggccgggaagaagcg 10181846



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 177     gccaagaagcagccgccgcc 196
               ||||||||||||||||||||
Sbjct: 2060984 gccaagaagcagccgccgcc 2060965
to top
>ref|XM_549104.2| PREDICTED: Canis familiaris similar to bromo domain-containing
            protein disrupted in leukemia (LOC491984), mRNA
          Length = 6039

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 211  gcagcagctctgaggaggag 230
            ||||||||||||||||||||
Sbjct: 2908 gcagcagctctgaggaggag 2927
to top
>ref|XR_003676.1| PREDICTED: Mus musculus similar to DEAD (Asp-Glu-Ala-Asp) box
           polypeptide 21a (LOC672033), mRNA
          Length = 2290

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ccaagaaggccaagaagcag 188
           ||||||||||||||||||||
Sbjct: 160 ccaagaaggccaagaagcag 179
to top
>gb|AC132384.2| Mus musculus BAC clone RP23-438F16 from chromosome 10, complete sequence
          Length = 182097

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    ccaagaaggccaagaagcag 188
              ||||||||||||||||||||
Sbjct: 143209 ccaagaaggccaagaagcag 143228



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   ccaagaaggccaagaagcag 188
             ||||||||||||||||||||
Sbjct: 63738 ccaagaaggccaagaagcag 63719
to top
>ref|XM_854087.1| PREDICTED: Canis familiaris hypothetical protein LOC607721
            (LOC607721), mRNA
          Length = 2103

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 209  cagcagcagctctgaggagg 228
            ||||||||||||||||||||
Sbjct: 1854 cagcagcagctctgaggagg 1835
to top
>gb|AC123044.4| Mus musculus BAC clone RP24-548B7 from chromosome 5, complete sequence
          Length = 184772

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 209    cagcagcagctctgaggagg 228
              ||||||||||||||||||||
Sbjct: 130779 cagcagcagctctgaggagg 130760
to top
>gb|AC151904.6| Mus musculus BAC clone RP23-233K6 from chromosome 10, complete sequence
          Length = 186667

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    ccaagaaggccaagaagcag 188
              ||||||||||||||||||||
Sbjct: 171416 ccaagaaggccaagaagcag 171435



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 169    ccaagaaggccaagaagcag 188
              ||||||||||||||||||||
Sbjct: 132656 ccaagaaggccaagaagcag 132637



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 169    ccaagaaggccaagaagcag 188
              ||||||||||||||||||||
Sbjct: 118807 ccaagaaggccaagaagcag 118788
to top
>emb|AJ973181.1| Sphaerechinus granularis mRNA for translation elongation factor 1B
           delta 2 subunit (eef1Bdelta2 gene)
          Length = 816

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 167 cgccaagaaggccaagaagc 186
           ||||||||||||||||||||
Sbjct: 519 cgccaagaaggccaagaagc 538
to top
>ref|XM_504483.1| Yarrowia lipolytica CLIB122, YALI0E27808g predicted mRNA
          Length = 1224

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 163 aggccgccaagaaggccaag 182
           ||||||||||||||||||||
Sbjct: 809 aggccgccaagaaggccaag 828
to top
>emb|AL117341.26|HSBA512N4 Human DNA sequence from clone RP11-512N4 on chromosome 10 Contains part
              of the gene for MOB protein, two novel genes and a CpG
              island, complete sequence
          Length = 181300

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 324    gacgaggaaattgcaaagaa 343
              ||||||||||||||||||||
Sbjct: 118752 gacgaggaaattgcaaagaa 118733
to top
>emb|Y14236.1|SGY14236 Sphaerichinus granularis mRNA for elongation factor-1d, 2639 bp
          Length = 2639

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 167 cgccaagaaggccaagaagc 186
           ||||||||||||||||||||
Sbjct: 520 cgccaagaaggccaagaagc 539
to top
>emb|Y14235.1|SGY14235 Sphaerichinus granularis mRNA for elongation factor-1d, 1931 bp
          Length = 1931

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 167 cgccaagaaggccaagaagc 186
           ||||||||||||||||||||
Sbjct: 520 cgccaagaaggccaagaagc 539
to top
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16
          Length = 348074

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    aagaggccgccaagaaggcc 179
              ||||||||||||||||||||
Sbjct: 332925 aagaggccgccaagaaggcc 332944



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    aagaggccgccaagaaggcc 179
              ||||||||||||||||||||
Sbjct: 332775 aagaggccgccaagaaggcc 332794
to top
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14
          Length = 344805

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    aagaggccgccaagaaggcc 179
              ||||||||||||||||||||
Sbjct: 278170 aagaggccgccaagaaggcc 278189



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    aagaggccgccaagaaggcc 179
              ||||||||||||||||||||
Sbjct: 278038 aagaggccgccaagaaggcc 278057
to top
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12
          Length = 349726

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   aagaggccgccaagaaggcc 179
             ||||||||||||||||||||
Sbjct: 88680 aagaggccgccaagaaggcc 88661
to top
>gb|AC163439.3| Mus musculus chromosome 8, clone RP23-390F12, complete sequence
          Length = 205063

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    agaaggccaagaagcagccg 191
              ||||||||||||||||||||
Sbjct: 168421 agaaggccaagaagcagccg 168440
to top
>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11,
             DP09G08, DP35C12 of chromosome 5  of Podospora anserina
          Length = 322194

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 247   aggaggaggttcccaagaagactg 270
             |||||||||||| |||||||||||
Sbjct: 16884 aggaggaggttctcaagaagactg 16861
to top
>gb|DQ118640.1| Pavlova lutheri isolate 481 chloroplast ATP sythase gamma mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 2168

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 162  gaggccgccaagaaggccaagaag 185
            ||||| ||||||||||||||||||
Sbjct: 1452 gaggcggccaagaaggccaagaag 1429
to top
>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0045E22, from chromosome 3, complete sequence
          Length = 160920

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    gggaaggccgggaagaagcg 79
             ||||||||||||||||||||
Sbjct: 43240 gggaaggccgggaagaagcg 43259
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 236      cgagtccgaggaggaggagg 255
                ||||||||||||||||||||
Sbjct: 19568265 cgagtccgaggaggaggagg 19568284
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 60       gggaaggccgggaagaagcg 79
                ||||||||||||||||||||
Sbjct: 10179928 gggaaggccgggaagaagcg 10179947



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 177     gccaagaagcagccgccgcc 196
               ||||||||||||||||||||
Sbjct: 2060996 gccaagaagcagccgccgcc 2060977
to top
>gb|AC112788.4| Homo sapiens BAC clone RP11-1221I12 from 2, complete sequence
          Length = 49322

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   agaaggccaagaagcagccg 191
             ||||||||||||||||||||
Sbjct: 39321 agaaggccaagaagcagccg 39302
to top
>gb|AC151901.3| Mus musculus BAC clone RP23-271E15 from chromosome 10, complete sequence
          Length = 182748

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 169    ccaagaaggccaagaagcag 188
              ||||||||||||||||||||
Sbjct: 169955 ccaagaaggccaagaagcag 169936
to top
>gb|AC152453.4| Mus musculus BAC clone RP24-238B3 from chromosome 10, complete sequence
          Length = 182371

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 169    ccaagaaggccaagaagcag 188
              ||||||||||||||||||||
Sbjct: 164185 ccaagaaggccaagaagcag 164166
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 36      gcgccgtcggccgtccttcc 55
               ||||||||||||||||||||
Sbjct: 6774283 gcgccgtcggccgtccttcc 6774302



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 160     aagaggccgccaagaaggcc 179
               ||||||||||||||||||||
Sbjct: 2519173 aagaggccgccaagaaggcc 2519154
to top
>ref|XM_342141.2| PREDICTED: Rattus norvegicus DEAD (Asp-Glu-Ala-Asp) box polypeptide
           21b (predicted) (Ddx21b_predicted), mRNA
          Length = 4951

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ccaagaaggccaagaagcag 188
           ||||||||||||||||||||
Sbjct: 365 ccaagaaggccaagaagcag 384
to top
>dbj|AP004794.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0506C10
          Length = 150549

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   cgagtccgaggaggaggagg 255
             ||||||||||||||||||||
Sbjct: 49997 cgagtccgaggaggaggagg 50016
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 168     gccaagaaggccaagaagca 187
               ||||||||||||||||||||
Sbjct: 2697943 gccaagaaggccaagaagca 2697962
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>dbj|AK060680.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C12, full
           insert sequence
          Length = 963

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 60  gggaaggccgggaagaagcg 79
           ||||||||||||||||||||
Sbjct: 581 gggaaggccgggaagaagcg 600
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>gb|AF107025.1|AF107025 Triticum aestivum similar to histone H1 mRNA sequence
          Length = 1082

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 166 ccgccaagaaggccaagaag 185
           ||||||||||||||||||||
Sbjct: 729 ccgccaagaaggccaagaag 748
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>gb|BC105878.1| Rattus norvegicus DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a, mRNA
           (cDNA clone MGC:124980 IMAGE:7126328), complete cds
          Length = 4413

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ccaagaaggccaagaagcag 188
           ||||||||||||||||||||
Sbjct: 262 ccaagaaggccaagaagcag 281
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>gb|AC113075.9| Mus musculus chromosome 19, clone RP23-278F24, complete sequence
          Length = 171837

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 258   cccaagaagactgcaaagcc 277
             ||||||||||||||||||||
Sbjct: 20152 cccaagaagactgcaaagcc 20133
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 168     gccaagaaggccaagaagca 187
               ||||||||||||||||||||
Sbjct: 4150771 gccaagaaggccaagaagca 4150790



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 168     gccaagaaggccaagaagca 187
               ||||||||||||||||||||
Sbjct: 4150579 gccaagaaggccaagaagca 4150598



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 168     gccaagaaggccaagaagca 187
               ||||||||||||||||||||
Sbjct: 4150384 gccaagaaggccaagaagca 4150403
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>ref|NM_001037201.1| Rattus norvegicus DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a
           (Ddx21a), mRNA
          Length = 4413

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 ccaagaaggccaagaagcag 188
           ||||||||||||||||||||
Sbjct: 262 ccaagaaggccaagaagcag 281
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 163     aggccgccaagaaggccaag 182
               ||||||||||||||||||||
Sbjct: 3286622 aggccgccaagaaggccaag 3286603
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>gb|U16725.1|CRU16725 Chlamydomonas reinhardtii histone H3 (ch3-III), histone H4 (ch4-III),
            histone H2B (ch2b-III) and histone H2A (ch2a-III) genes,
            complete cds
          Length = 4582

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 163  aggccgccaagaaggccaagaagcagcc 190
            |||||| |||||||||||||||| ||||
Sbjct: 2704 aggccggcaagaaggccaagaaggagcc 2677
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>gb|U16724.1|CRU16724 Chlamydomonas reinhardtii histone H3 (ch3-II), histone H4 (ch4-II),
            histone H2B (ch2b-II) and histone H2A (ch2a-II) genes,
            complete cds
          Length = 3777

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 163  aggccgccaagaaggccaagaagcagcc 190
            ||||||| ||||||||||||||| ||||
Sbjct: 2819 aggccgcgaagaaggccaagaaggagcc 2792
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>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 163    aggccgccaagaaggccaag 182
              ||||||||||||||||||||
Sbjct: 325068 aggccgccaagaaggccaag 325087
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>emb|AL590619.9| Mouse DNA sequence from clone RP23-357B4 on chromosome 8, complete
              sequence
          Length = 198540

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    agaaggccaagaagcagccg 191
              ||||||||||||||||||||
Sbjct: 102862 agaaggccaagaagcagccg 102881
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>gb|M83207.1|DROESCARGO Drosophila melanogaster developmental escargot-encoded protein gene,
            complete cds
          Length = 4106

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 166  ccgccaagaaggccaagaagcagccgcc 193
            |||||||||||| |||||| ||||||||
Sbjct: 1899 ccgccaagaaggacaagaaccagccgcc 1926
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>dbj|D87065.1| Triticum aestivum gene for histone H1, complete cds, clone:TH325
          Length = 2541

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 166  ccgccaagaaggccaagaag 185
            ||||||||||||||||||||
Sbjct: 1821 ccgccaagaaggccaagaag 1840
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>dbj|D87064.1| Triticum aestivum gene for histone H1, complete cds, clone:TH315
          Length = 3025

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 166  ccgccaagaaggccaagaag 185
            ||||||||||||||||||||
Sbjct: 1810 ccgccaagaaggccaagaag 1829
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>emb|AL590462.1|CNS07EGJ DNA centromeric region sequence BAC 34F04 of chromosome 5 of Podospora
             anserina
          Length = 103568

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 247   aggaggaggttcccaagaagactg 270
             |||||||||||| |||||||||||
Sbjct: 88227 aggaggaggttctcaagaagactg 88250


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,837,979
Number of Sequences: 3902068
Number of extensions: 3837979
Number of successful extensions: 88680
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87727
Number of HSP's gapped (non-prelim): 952
length of query: 381
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 359
effective length of database: 17,147,199,772
effective search space: 6155844718148
effective search space used: 6155844718148
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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