>DAPA2_WHEAT (P24847) Dihydrodipicolinate synthase 2, chloroplast precursor (EC|
           4.2.1.52) (DHDPS 2)
          Length = 377

 Score =  172 bits (435), Expect = 2e-43
 Identities = 85/111 (76%), Positives = 87/111 (78%)
 Frame = +3

Query: 45  MMAAQPTGSPGARLGWKGPGXXXXXXXXXXXXXXXXXXXXHRVSRGKFSAAAITTDDYLP 224
           MMAAQPT +PG RLGWK PG                    HRV RGKFSAAAITTDDYLP
Sbjct: 1   MMAAQPTANPGVRLGWKAPGALASPPRLALSRSAAAPLASHRVGRGKFSAAAITTDDYLP 60

Query: 225 MRSTEVKNRTSVDGIKSLRLITAIKTPYLPDGRFDLEAYDSLINTQINGGA 377
           MRSTEVKNRTSVDGIKSLRLITA+KTPYLPDGRFDLEAYDSLINTQINGGA
Sbjct: 61  MRSTEVKNRTSVDGIKSLRLITAVKTPYLPDGRFDLEAYDSLINTQINGGA 111

>DAPA1_WHEAT (P24846) Dihydrodipicolinate synthase 1, chloroplast precursor (EC|
           4.2.1.52) (DHDPS 1)
          Length = 388

 Score =  131 bits (329), Expect = 5e-31
 Identities = 63/70 (90%), Positives = 67/70 (95%)
 Frame = +3

Query: 168 RVSRGKFSAAAITTDDYLPMRSTEVKNRTSVDGIKSLRLITAIKTPYLPDGRFDLEAYDS 347
           RVS+GKF+ AA+T DDYLPMRSTEVKNRTS DGIKSLRLITA+KTPYLPDGRFDLEAYDS
Sbjct: 53  RVSKGKFAVAAVTLDDYLPMRSTEVKNRTSTDGIKSLRLITAVKTPYLPDGRFDLEAYDS 112

Query: 348 LINTQINGGA 377
           LINTQINGGA
Sbjct: 113 LINTQINGGA 122

>DAPA_MAIZE (P26259) Dihydrodipicolinate synthase, chloroplast precursor (EC|
           4.2.1.52) (DHDPS)
          Length = 380

 Score =  114 bits (285), Expect = 6e-26
 Identities = 57/67 (85%), Positives = 58/67 (86%)
 Frame = +3

Query: 177 RGKFSAAAITTDDYLPMRSTEVKNRTSVDGIKSLRLITAIKTPYLPDGRFDLEAYDSLIN 356
           RGK S AAIT DDYLPMRSTEVKNRTS D I  LRLITA+KTPYLPDGRFDLEAYDSLIN
Sbjct: 48  RGKVSLAAITLDDYLPMRSTEVKNRTSTDDITRLRLITAVKTPYLPDGRFDLEAYDSLIN 107

Query: 357 TQINGGA 377
            QI GGA
Sbjct: 108 MQIEGGA 114

>DAPA_COILA (Q39535) Dihydrodipicolinate synthase, chloroplast precursor (EC|
           4.2.1.52) (DHDPS)
          Length = 377

 Score =  110 bits (274), Expect = 1e-24
 Identities = 54/66 (81%), Positives = 57/66 (86%)
 Frame = +3

Query: 180 GKFSAAAITTDDYLPMRSTEVKNRTSVDGIKSLRLITAIKTPYLPDGRFDLEAYDSLINT 359
           G+   +AIT DDYLPMRSTEVKNRTS D I SLRLITA+KTPYLPDGRFDLEAYDSLIN 
Sbjct: 46  GRGKVSAITLDDYLPMRSTEVKNRTSTDDITSLRLITAVKTPYLPDGRFDLEAYDSLINM 105

Query: 360 QINGGA 377
           QI GGA
Sbjct: 106 QIEGGA 111

>DAPA_TOBAC (Q42948) Dihydrodipicolinate synthase, chloroplast precursor (EC|
           4.2.1.52) (DHDPS)
          Length = 359

 Score = 95.1 bits (235), Expect = 4e-20
 Identities = 47/70 (67%), Positives = 54/70 (77%)
 Frame = +3

Query: 168 RVSRGKFSAAAITTDDYLPMRSTEVKNRTSVDGIKSLRLITAIKTPYLPDGRFDLEAYDS 347
           R +R +   AA+    +LPMRS EVKNRT  D IK+LRLITAIKTPYLPDGRFDLEAYD+
Sbjct: 24  RTTRWRSPRAAVIPSFHLPMRSNEVKNRTFADDIKALRLITAIKTPYLPDGRFDLEAYDT 83

Query: 348 LINTQINGGA 377
           L+N QI  GA
Sbjct: 84  LVNLQIENGA 93

>DAPA2_ARATH (Q9FVC8) Dihydrodipicolinate synthase 2, chloroplast precursor (EC|
           4.2.1.52) (DHDPS 2)
          Length = 365

 Score = 92.8 bits (229), Expect = 2e-19
 Identities = 46/70 (65%), Positives = 54/70 (77%)
 Frame = +3

Query: 168 RVSRGKFSAAAITTDDYLPMRSTEVKNRTSVDGIKSLRLITAIKTPYLPDGRFDLEAYDS 347
           R S+     AA+  + +LPMRS EVKNRT+ D IK+LR+ITAIKTPYLPDGRFDLEAYD 
Sbjct: 30  RSSKWVSPKAAVVPNFHLPMRSLEVKNRTNTDDIKALRVITAIKTPYLPDGRFDLEAYDD 89

Query: 348 LINTQINGGA 377
           L+N QI  GA
Sbjct: 90  LVNIQIQNGA 99

>DAPA1_ARATH (Q9LZX6) Dihydrodipicolinate synthase 1, chloroplast precursor (EC|
           4.2.1.52) (DHDPS 1)
          Length = 365

 Score = 90.9 bits (224), Expect = 7e-19
 Identities = 43/61 (70%), Positives = 51/61 (83%)
 Frame = +3

Query: 195 AAITTDDYLPMRSTEVKNRTSVDGIKSLRLITAIKTPYLPDGRFDLEAYDSLINTQINGG 374
           AA+  + +LPMRS E KNRT+ D I+SLR+ITAIKTPYLPDGRFDL+AYD L+NTQI  G
Sbjct: 39  AAVVPNFHLPMRSLEDKNRTNTDDIRSLRVITAIKTPYLPDGRFDLQAYDDLVNTQIENG 98

Query: 375 A 377
           A
Sbjct: 99  A 99

>DAPA_SOYBN (Q42800) Dihydrodipicolinate synthase, chloroplast precursor (EC|
           4.2.1.52) (DHDPS)
          Length = 332

 Score = 90.5 bits (223), Expect = 9e-19
 Identities = 44/63 (69%), Positives = 53/63 (84%)
 Frame = +3

Query: 189 SAAAITTDDYLPMRSTEVKNRTSVDGIKSLRLITAIKTPYLPDGRFDLEAYDSLINTQIN 368
           ++AA+  + +LPMRS E+KNRTS + IK+LRLITAIKTPYLPDGRFDLEAYD L+N QI 
Sbjct: 4   NSAAVKPNFHLPMRSFELKNRTSPEDIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIG 63

Query: 369 GGA 377
            GA
Sbjct: 64  QGA 66

>DAPA_XANCP (Q8P9V6) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)|
          Length = 302

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 15/31 (48%), Positives = 23/31 (74%)
 Frame = +3

Query: 282 LITAIKTPYLPDGRFDLEAYDSLINTQINGG 374
           +ITA+ TP+ PDG  DL+A+  L+  Q++GG
Sbjct: 6   IITALATPFGPDGTLDLDAWRRLLEQQLHGG 36

>DAPA_XANAC (Q8PLN5) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)|
          Length = 302

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 15/31 (48%), Positives = 23/31 (74%)
 Frame = +3

Query: 282 LITAIKTPYLPDGRFDLEAYDSLINTQINGG 374
           +ITA+ TP+ PDG  DL+A+  L+  Q++GG
Sbjct: 6   IITALATPFGPDGALDLDAWRRLLEQQLHGG 36

>DAPA_XYLFT (Q87AT3) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)|
          Length = 302

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 14/31 (45%), Positives = 22/31 (70%)
 Frame = +3

Query: 282 LITAIKTPYLPDGRFDLEAYDSLINTQINGG 374
           +ITA+ TP+  DG FD +A+  L++ Q+ GG
Sbjct: 6   IITALVTPFDRDGAFDRDAWIRLLDMQLAGG 36

>DAPA_XYLFA (Q9PER5) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)|
          Length = 302

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 14/31 (45%), Positives = 22/31 (70%)
 Frame = +3

Query: 282 LITAIKTPYLPDGRFDLEAYDSLINTQINGG 374
           +ITA+ TP+  DG FD +A+  L++ Q+ GG
Sbjct: 6   IITALVTPFDRDGAFDRDAWIRLLDLQLAGG 36

>DAPA_BRUSU (Q8G1R0) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)|
          Length = 293

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +3

Query: 285 ITAIKTPYLPDGRFDLEAYDSLINTQINGG 374
           ITA+ TP+  +G FD +A+ + +N QI  G
Sbjct: 6   ITALVTPFDREGAFDEKAFRAFVNWQIEEG 35

>DAPA_BRUME (Q8YG60) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)|
          Length = 293

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +3

Query: 285 ITAIKTPYLPDGRFDLEAYDSLINTQINGG 374
           ITA+ TP+  +G FD +A+ + +N QI  G
Sbjct: 6   ITALVTPFDREGAFDEKAFRAFVNWQIEEG 35

>DAPA_BRUAB (Q57E96) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)|
          Length = 293

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +3

Query: 285 ITAIKTPYLPDGRFDLEAYDSLINTQINGG 374
           ITA+ TP+  +G FD +A+ + +N QI  G
Sbjct: 6   ITALVTPFDREGAFDEKAFRAFVNWQIEEG 35

>DAPA_CHLAB (Q5L5G7) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)|
          Length = 288

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +3

Query: 276 LRLITAIKTPYLPDGRFDLEAYDSLINTQ 362
           ++L+TA  TP+LPD   D  ++++L+  Q
Sbjct: 1   MKLLTASVTPFLPDHSIDFLSFENLLRFQ 29

>GYRB_PSEPU (P13364) DNA gyrase subunit B (EC 5.99.1.3)|
          Length = 806

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/59 (22%), Positives = 30/59 (50%)
 Frame = +3

Query: 189 SAAAITTDDYLPMRSTEVKNRTSVDGIKSLRLITAIKTPYLPDGRFDLEAYDSLINTQI 365
           S+   + + Y+       KN+ +  G  +   +TAI +  +PD +F  +  D L+++++
Sbjct: 289 SSLTRSLNSYIEQEGLAKKNKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEV 347

>GYRB_BUCAP (P29435) DNA gyrase subunit B (EC 5.99.1.3)|
          Length = 803

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/41 (29%), Positives = 25/41 (60%)
 Frame = +3

Query: 243 KNRTSVDGIKSLRLITAIKTPYLPDGRFDLEAYDSLINTQI 365
           KN+T + G  +   +TAI +  +PD +F  +  D L+++++
Sbjct: 305 KNKTIITGEDTREGLTAIISIKIPDPKFSSQTKDKLVSSEV 345

>DAPA_RHILO (P58207) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)|
          Length = 293

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 285 ITAIKTPYLPDGRFDLEAYDSLINTQINGG 374
           +TA+ TP+   GRFD +A+ + +  Q+  G
Sbjct: 6   LTALVTPFEKSGRFDEKAFRAFVEWQLGEG 35

>GRPE_METAC (Q8TQR3) Protein grpE (HSP-70 cofactor)|
          Length = 209

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -3

Query: 360 ACLSENHMLQDQIFRLA 310
           AC  EN +L+DQ+FRLA
Sbjct: 58  ACREENELLKDQLFRLA 74

>DAPA_LACLA (Q9CF61) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)|
          Length = 297

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 10/35 (28%), Positives = 24/35 (68%)
 Frame = +3

Query: 249 RTSVDGIKSLRLITAIKTPYLPDGRFDLEAYDSLI 353
           + +++ +++ R+ITA+ TP+  +G+ +  A+  LI
Sbjct: 4   KETIEKLQNARIITALVTPFKENGQINFGAFPKLI 38

>GRPE_METMA (P42367) Protein grpE (HSP-70 cofactor)|
          Length = 209

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -3

Query: 360 ACLSENHMLQDQIFRLA 310
           AC  EN +L+DQ+FRLA
Sbjct: 58  ACREENEILKDQLFRLA 74

>GYRB_VIBPA (O51859) DNA gyrase subunit B (EC 5.99.1.3)|
          Length = 805

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/59 (20%), Positives = 30/59 (50%)
 Frame = +3

Query: 189 SAAAITTDDYLPMRSTEVKNRTSVDGIKSLRLITAIKTPYLPDGRFDLEAYDSLINTQI 365
           +A   T + ++       K +T+  G  +   +TA+ +  +PD +F  +  D L+++++
Sbjct: 288 AALTRTLNSFMDKEGFSKKAKTATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEV 346

>GSPL_ERWCH (P31707) General secretion pathway protein L (Pectic enzymes|
           secretion protein outL)
          Length = 399

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -2

Query: 289 VISLRLLIPSTDVRFFT 239
           VIS R+L+PSTDV F T
Sbjct: 57  VISARVLVPSTDVTFHT 73

>APGM_SULAC (Q4JAH5) 2,3-bisphosphoglycerate-independent phosphoglycerate|
           mutase (EC 5.4.2.1) (Phosphoglyceromutase)
           (BPG-independent PGAM) (aPGAM)
          Length = 413

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = -1

Query: 245 FHFSTSHR-KIVISGDGCS*KLSSTNP 168
           F+  T HR  +V+SG G S K+S T+P
Sbjct: 143 FYHGTEHRVAVVLSGKGLSDKISDTDP 169


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,261,052
Number of Sequences: 219361
Number of extensions: 611483
Number of successful extensions: 1545
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1545
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)